BLASTX nr result

ID: Papaver30_contig00029305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00029305
         (451 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269385.1| PREDICTED: tubulin-folding cofactor C-like [...    57   4e-06
ref|XP_010278223.1| PREDICTED: tubulin-folding cofactor C [Nelum...    57   7e-06
ref|XP_006411793.1| hypothetical protein EUTSA_v10025595mg [Eutr...    49   8e-06

>ref|XP_002269385.1| PREDICTED: tubulin-folding cofactor C-like [Vitis vinifera]
           gi|731410356|ref|XP_010657532.1| PREDICTED:
           tubulin-folding cofactor C-like [Vitis vinifera]
          Length = 351

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -1

Query: 451 ISRKSDSNDLPAFDTTMHFQIDFTNTDRILSCY*FSIKTYSKI*SW*TIEFISRT*ETST 272
           ++RKSDS   P+F++T  F   F+++ R +       +  S       ++ IS +     
Sbjct: 41  LARKSDSVSGPSFESTQSFLTRFSDSKRSIESQLAGARLTSDPQRRSDLQQISTSIADLE 100

Query: 271 GAV-ENSYFLLSYEMQSSLKTLSDFKETLESVNTGLLPKK 155
             V ENSY+L SYE++S+LK++S+ K+TL+++N+ LLPKK
Sbjct: 101 KLVAENSYYLPSYEIRSALKSVSELKQTLDNLNSELLPKK 140


>ref|XP_010278223.1| PREDICTED: tubulin-folding cofactor C [Nelumbo nucifera]
           gi|720071985|ref|XP_010278224.1| PREDICTED:
           tubulin-folding cofactor C [Nelumbo nucifera]
          Length = 361

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
 Frame = -1

Query: 451 ISRKSDSNDLPAFDTTMHFQIDFTNTDRILS-----CY*FSIKTYSKI*SW*TIEFISRT 287
           ISRKSDSN    F++T  F   F+   R +      C   S    SK      +E IS +
Sbjct: 43  ISRKSDSNGPSPFESTKSFLDRFSEAKRSIQNELDRCRQVSDPD-SKARLKSELEKISVS 101

Query: 286 *ETSTGAV-ENSYFLLSYEMQSSLKTLSDFKETLESVNTGLLPKK 155
                  V ENSY+L SYE++SSLKT+S+ KE+L++VN+ +LPKK
Sbjct: 102 ISDLERLVSENSYYLPSYEVRSSLKTISELKESLDNVNSEVLPKK 146


>ref|XP_006411793.1| hypothetical protein EUTSA_v10025595mg [Eutrema salsugineum]
           gi|557112963|gb|ESQ53246.1| hypothetical protein
           EUTSA_v10025595mg [Eutrema salsugineum]
          Length = 351

 Score = 49.3 bits (116), Expect(2) = 8e-06
 Identities = 22/36 (61%), Positives = 32/36 (88%)
 Frame = -1

Query: 262 ENSYFLLSYEMQSSLKTLSDFKETLESVNTGLLPKK 155
           ENSYFL SYE++SSLK +SD K++L+S+++ L+PKK
Sbjct: 110 ENSYFLPSYEVRSSLKVVSDLKQSLDSLSSELVPKK 145



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 393 RSISRIQTEFYLVTDSVSKLTLKSNLGKLSNLFPELEKLVPE 268
           RSI     E  L + S     LKS+L ++S +   LEKL+ E
Sbjct: 69  RSIESRIVESRLASSSADSSKLKSDLAEISLVIANLEKLLAE 110


Top