BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00029015
         (1945 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832...    99   4e-40
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]        98   4e-40
ref|XP_009140866.1| PREDICTED: uncharacterized protein LOC103864...   105   5e-40
ref|XP_009111948.1| PREDICTED: putative ribonuclease H protein A...   107   8e-39
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    95   4e-38
ref|XP_013673350.1| PREDICTED: uncharacterized protein LOC106377...    95   2e-37
ref|XP_013719461.1| PREDICTED: uncharacterized protein LOC106423...    91   3e-36
ref|XP_009114688.1| PREDICTED: uncharacterized protein LOC103839...    93   3e-36
ref|XP_009113141.1| PREDICTED: putative ribonuclease H protein A...    96   3e-36
ref|XP_009117174.1| PREDICTED: putative ribonuclease H protein A...    93   6e-36
ref|XP_013651237.1| PREDICTED: uncharacterized protein LOC106355...    91   2e-35
ref|XP_013651236.1| PREDICTED: uncharacterized protein LOC106355...    91   2e-35
ref|XP_009144061.1| PREDICTED: uncharacterized protein LOC103867...    95   2e-35
ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein A...    98   3e-35
ref|XP_013669512.1| PREDICTED: uncharacterized protein LOC106373...    91   5e-35
ref|XP_013669511.1| PREDICTED: uncharacterized protein LOC106373...    91   5e-35
ref|XP_010524744.1| PREDICTED: uncharacterized protein LOC104802...    90   5e-35
ref|XP_009144152.1| PREDICTED: uncharacterized protein LOC103867...    93   6e-35
ref|XP_009132217.1| PREDICTED: putative ribonuclease H protein A...    95   6e-35
ref|XP_010521406.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    93   1e-34

>ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832284 [Brassica rapa]
          Length = 1156

 Score = 99.0 bits (245), Expect(2) = 4e-40
 Identities = 46/153 (30%), Positives = 77/153 (50%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W +       GGLG++ I+  N    ++ +W+I S  +++WV WV+ + I    FW  
Sbjct: 780  VAWESVCTAKESGGLGLRRIAELNTVYGIKLLWNIFSGSDSLWVAWVKRHYIPPNLFWTA 839

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
               T  SW WR ++  R +A  F+L  + +G NT  W DNW   G ++    P     S 
Sbjct: 840  DFTTVGSWIWRWLMKLRDLARPFLLTNVVSGRNTSFWHDNWTTDGPILSTTGPTGPMVSG 899

Query: 1555 HHLDARVSSCLVEGTWNLSPNLKNALGNFVTEV 1457
              +DA V+S +  G WN+S   ++++  ++  V
Sbjct: 900  IPIDASVASAVTNGDWNISSRSRHSVLRYIRSV 932



 Score = 96.3 bits (238), Expect(2) = 4e-40
 Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
 Frame = -3

Query: 1409 AGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWG 1230
            A    +F +   +  L        WHK++WF   IPRH FI W+ ++  + T+ +L+SWG
Sbjct: 955  ADQPSDFSVSKFFRTLNPDPPAIPWHKVVWFKKRIPRHSFITWLVMRDRMVTRDRLISWG 1014

Query: 1229 MEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQD-------WDKQID 1071
            M+V P C+LC    E   H+FF C Y +             D++A+            ++
Sbjct: 1015 MDVSPSCLLCGTRAESVKHIFFECDYSL---------RVWNDIMARSRLQPPSALHAIVN 1065

Query: 1070 WCVDHIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
            W       G  + T+  L+F A IYH+W ERN R  S  + P G +  ++   +R +L
Sbjct: 1066 WLSSPQLQG-KLRTMLHLIFQATIYHLWKERNNRLHSNIARPPGQIIKEIALQLRSKL 1122


>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
          Length = 438

 Score = 97.8 bits (242), Expect(2) = 4e-40
 Identities = 46/130 (35%), Positives = 70/130 (53%)
 Frame = -3

Query: 1376 TYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCN 1197
            T+NALRHKEV+K W   +WF    P++ F +W++ Q  L+TK ++++WG  V PVC LC 
Sbjct: 310  TWNALRHKEVEKPWVSSVWFKGVTPKNAFNMWITHQDRLRTKLRMIAWGFLVSPVCALCQ 369

Query: 1196 IMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIGTIKRL 1017
            +  E   HL  SC + V               I Q+W + I W  +  K   S  T+++L
Sbjct: 370  VGFETRDHLMLSCDFSVSVWALVRQRIGTPLTIFQNWSELILWTQNRSKAAPS--TLRKL 427

Query: 1016 MFNAFIYHVW 987
            +  A +Y +W
Sbjct: 428  VAQAVVYALW 437



 Score = 97.4 bits (241), Expect(2) = 4e-40
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
 Frame = -1

Query: 1930 YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRW-VQDNL-IK 1757
            + +  V W+    P +EGGLG++  +  N A+NL+ IW + S+  ++WV W +  NL   
Sbjct: 119  HHKAKVSWSTVCLPKAEGGLGVRKFTEWNTALNLKLIWLLFSNSGSLWVAWHLFHNLSTS 178

Query: 1756 AQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPP 1577
              +FW +K  T  SW WR +L  RP+A+KF+   IGNG     W D+W   G L+     
Sbjct: 179  VSNFWLIKEGTTDSWNWRCLLRLRPLASKFLFCSIGNGLTASFWADSWTPFGPLLTFIGS 238

Query: 1576 QMQFDSDHHLDARVSSCLVEGTWNL-SPNLKNALG--NFVTEVESIQTDHLICDMVVWRL 1406
                +    L ++V+  +    W L SP   NAL    F+T + SI    L+ D  +W++
Sbjct: 239  DGPRNQRIPLCSKVADVVNGNRWLLPSPRSSNALNLHAFLTTL-SIPLQPLVEDSYLWKV 297


>ref|XP_009140866.1| PREDICTED: uncharacterized protein LOC103864849 [Brassica rapa]
          Length = 1622

 Score =  105 bits (263), Expect(2) = 5e-40
 Identities = 58/172 (33%), Positives = 87/172 (50%)
 Frame = -3

Query: 1412 EAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSW 1233
            E GN G F   +T+ AL     +  WHK +WF   IP+H FI W++ +  + T+ KL+ W
Sbjct: 1429 ERGN-GCFSTSETWRALHPPPAEVFWHKAVWFVGRIPKHAFITWIAARDRMVTRDKLIGW 1487

Query: 1232 GMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHI 1053
            G+ V   C+LC+   E   HLFF C+Y                V+ Q +D+ + W     
Sbjct: 1488 GLTVPSNCVLCSGHDESRQHLFFECAYS--HQVWSFFLSRLHLVVPQGFDEVLRWLKTSS 1545

Query: 1052 KGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
            + GN +  I +L+  A +Y +W ERN R  S    P G L  ++ + +RLRL
Sbjct: 1546 RDGN-VNLIMKLIHQAVLYLIWKERNARIHSSVEKPPGALIAEIKQTIRLRL 1596



 Score = 89.0 bits (219), Expect(2) = 5e-40
 Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + W +   P   GGLG++ ++  N  + L+ IW I ++  ++WV WV+ NLI  ++FW L
Sbjct: 1253 IAWDSVCTPKEAGGLGLRRLADWNKVLGLKLIWLIFTAGGSLWVSWVRRNLIGRENFWML 1312

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                  SW W+ I   RP+A   V   +G+G     W DNW   G L+ +        + 
Sbjct: 1313 NPSRRGSWIWKAICKLRPLARPMVHCELGSGITASFWYDNWTSIGPLIDLVGENGPQVTG 1372

Query: 1555 HHLDARVSSCLVEGTWNLSPN---------LKNALGNFVTEVESIQTDHLICDMVVW-RL 1406
              ++A V+  L  G W L  +         LK  L N   EV   + D    D  VW   
Sbjct: 1373 LSINAVVADALTNGGWWLDRSRSRHPIISLLKECLPN-AQEVLDSEVD----DKYVWYPT 1427

Query: 1405 ATRGN 1391
            A RGN
Sbjct: 1428 AERGN 1432


>ref|XP_009111948.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 409

 Score =  107 bits (267), Expect(2) = 8e-39
 Identities = 56/162 (34%), Positives = 79/162 (48%)
 Frame = -1

Query: 1921 PSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFW 1742
            P V W     P  EGGLG++ +S  N  + LR IW++ S+ +++W  W++ N IK   FW
Sbjct: 46   PKVSWEICCLPKEEGGLGLRNLSVWNRTLCLRLIWNLYSNSSSLWADWIRANRIKQSIFW 105

Query: 1741 YLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFD 1562
             ++A T SSW W+ IL  R  A   +   IGNG  T  W DNW   G L+    P     
Sbjct: 106  EIEASTLSSWTWKAILSLRHTAAGLLKSNIGNGKFTSFWHDNWTPFGQLIKFIGPHGPRQ 165

Query: 1561 SDHHLDARVSSCLVEGTWNLSPNLKNALGNFVTEVESIQTDH 1436
                 DA V+S +  G WNL P   +    F   + ++   H
Sbjct: 166  LGIPSDATVASVIRNGGWNLRPARSDEAFAFQIHLSTVYFPH 207



 Score = 83.6 bits (205), Expect(2) = 8e-39
 Identities = 48/166 (28%), Positives = 69/166 (41%)
 Frame = -3

Query: 1418 CVEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLL 1239
            C        F  K T+ +LR +   + W   +WF   IPRH F  W++    L T+ +L 
Sbjct: 218  CANDIELDHFSTKHTWESLRPRAPTQPWTANVWFKGAIPRHAFHFWITHLDRLPTRARLS 277

Query: 1238 SWGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVD 1059
            +WG++V   C LC+   ED  HLF  C                       W   + W  D
Sbjct: 278  TWGLQVQQSCCLCDQAREDRDHLFLRCEVSEHLWTLVLRRLGYGRFFFHTWLAFVTWMGD 337

Query: 1058 HIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKM 921
              +   +  T++RL   A IY +W ERN R  +  S     LF K+
Sbjct: 338  --RDSVTPQTLRRLACQATIYTIWTERNSRLHNNVSSSPAALFKKL 381


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 94.7 bits (234), Expect(2) = 4e-38
 Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
 Frame = -1

Query: 1945 GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDN 1766
            G EL  K+  V W +   P  EGGLG++ ++  N    L+ IW ++SS +++WV+W++  
Sbjct: 70   GPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLLSS-SSLWVQWLRQY 128

Query: 1765 LIKAQDFWYLK-APTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMG 1589
            +I+   FW L+   T  SW WR++L +R +A+ F  + I NG     W DNW   G L+ 
Sbjct: 129  VIRKGSFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPLIA 188

Query: 1588 MFPPQMQFDSDHHLDARVSSCLVEGTWNLSPNLKNALGNFVTEVESIQTDHLI--CDMVV 1415
            +   +   D    + A V+  L   T     +  + L     ++E ++T  L+   D+V+
Sbjct: 189  ISGTRGCIDMGIDIHATVAEAL---THRRRRHRADHLNQMEAQLEELRTKGLVETEDVVL 245

Query: 1414 WR 1409
            W+
Sbjct: 246  WK 247



 Score = 94.0 bits (232), Expect(2) = 4e-38
 Identities = 48/169 (28%), Positives = 84/169 (49%)
 Frame = -3

Query: 1391 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1212
            F  K+T+   R ++ + +W++ IWF H  P++ FI W++ +  L T  +++SW   V+  
Sbjct: 257  FSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLS 316

Query: 1211 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIG 1032
            C+ C    E   HLFF+C Y              R   + DW   +    D   G N + 
Sbjct: 317  CVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTRH-YSTDWTTILKLLTDKTLGNNRL- 374

Query: 1031 TIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCK 885
             + R  F   +Y +W ERN R   ++ +P+ LL  ++ ++VR +L+T +
Sbjct: 375  FLLRYAFQILVYSIWKERNSRRHGEEPLPSALLLKRLDKEVRNKLSTIR 423


>ref|XP_013673350.1| PREDICTED: uncharacterized protein LOC106377632 [Brassica napus]
          Length = 1323

 Score = 94.7 bits (234), Expect(2) = 2e-37
 Identities = 57/168 (33%), Positives = 82/168 (48%)
 Frame = -3

Query: 1400 TGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEV 1221
            TG F   DT+ AL    V+  WHK +WF   I +H FI WV+       + +LL WG+ V
Sbjct: 834  TGTFSTSDTWRALHPYPVEVVWHKAVWFSGRISKHAFISWVA------ARDRLLRWGLTV 887

Query: 1220 DPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGN 1041
               C+LC    E+  HLFF C+Y                   + ++  + W V   +  N
Sbjct: 888  PSACVLCVRNQENRQHLFFDCAYSNQVWGFFVSRLQLNP--PRGFEDVLRWLVAPSR-DN 944

Query: 1040 SIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
            ++  + RL+F A +Y VW ERN+R  S    P G L  ++ + VRLRL
Sbjct: 945  NVTMMIRLIFQAVVYLVWKERNKRIHSAVEKPPGTLISEVQQIVRLRL 992



 Score = 91.7 bits (226), Expect(2) = 2e-37
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + W +   P   GGLG++ ++  N  + L+ IW I ++  ++WV WV+ NLI  ++FW L
Sbjct: 655  IAWDSVCTPKEAGGLGLRRLADWNKVLGLKLIWLIFTAGGSLWVSWVRRNLIGGENFWVL 714

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                  SW WR I   RP+A   V+  +G+G     W+DNW   G L+ +   +    + 
Sbjct: 715  DPARRGSWIWRSICKLRPLARPMVVCEVGSGITASFWQDNWTSLGPLIDLVGERGPQVTG 774

Query: 1555 HHLDARVSSCL-VEGTW-----NLSP---NLKNALGNFVTEVESIQTDHLICDMVVW 1412
              +DA V+  L  EG W     + SP    LK  L N   E+ S + D    D  VW
Sbjct: 775  LSIDAVVADALTAEGWWLGRSRSRSPIISLLKECLPN-AQEIMSSEVD----DTYVW 826


>ref|XP_013719461.1| PREDICTED: uncharacterized protein LOC106423220 [Brassica napus]
          Length = 891

 Score = 91.3 bits (225), Expect(2) = 3e-36
 Identities = 47/169 (27%), Positives = 83/169 (49%)
 Frame = -3

Query: 1391 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1212
            F  ++T+  +R+    ++W K +WF H  P++ F VW +++  L T  ++L W   ++P+
Sbjct: 574  FSSRNTWLEIRNNYATQEWSKGVWFKHATPKYAFHVWTAMRDRLSTCDRMLKWNQNINPI 633

Query: 1211 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIG 1032
            C+LC   +E   HLFFSCSY                   ++W+  +   +D  +    + 
Sbjct: 634  CVLCQRCVETRNHLFFSCSYTSKIWQKLVKGLLHLR-YTEEWEAIVSLLLDSREERVRL- 691

Query: 1031 TIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCK 885
             + R  F    + +W ERNRR   ++  P  LL   + + VR RL+T +
Sbjct: 692  FLLRYTFQTATHTIWWERNRRRHGEEQYPYSLLIKTIDKTVRNRLSTIR 740



 Score = 90.9 bits (224), Expect(2) = 3e-36
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
 Frame = -1

Query: 1945 GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDN 1766
            G EL  ++  V W       SEGGLGI+ +   N    L+ IW I+S + ++WV+W+Q  
Sbjct: 386  GPELSTRKSKVAWKEVSKKKSEGGLGIRPLKEVNEVACLKLIWRILSEQKSLWVKWIQIY 445

Query: 1765 LIKAQDFWYLKAPTDS-SWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMG 1589
            LI+    W ++  T + SW W++IL  R +A  F    I N ++T  W D+W   G L+ 
Sbjct: 446  LIRKGSLWTIRDNTAAGSWMWKKILKTRAVAKDFHRVDIKNREDTSFWNDHWCEMGRLIE 505

Query: 1588 MFPPQMQFDSDHHLDARVSSCLVEGTWNLSPNLKNALGNFVTEVESIQTDH-LICDMVVW 1412
            +     + D     +A V+  +   +     +  N L     E+E ++TD+  + D+ +W
Sbjct: 506  VLGIGGRIDLGIPANATVAEAI--ASHRRRYHRSNILNEVEEEMERVKTDNSQMEDIPLW 563

Query: 1411 RLAT---RGNFSSR 1379
            R      R +FSSR
Sbjct: 564  RSKEGIYRRSFSSR 577


>ref|XP_009114688.1| PREDICTED: uncharacterized protein LOC103839958 [Brassica rapa]
          Length = 688

 Score = 93.2 bits (230), Expect(2) = 3e-36
 Identities = 56/173 (32%), Positives = 81/173 (46%)
 Frame = -3

Query: 1415 VEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLS 1236
            V    TG F   +T+  L     +  WH+ +WF   IP+H FI WV+ +  + T+ KL+ 
Sbjct: 493  VPGRGTGIFSASETWRVLFPAPTEVFWHESVWFAGRIPKHAFITWVAARDRMVTRDKLIR 552

Query: 1235 WGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDH 1056
            WG+ V   C+LC+   E   HLFF C+Y                V  Q +D+ + W    
Sbjct: 553  WGLTVPETCVLCSGHNESRQHLFFDCAYS--NQVWSFFISRLNLVSPQSFDEVLRWLKAP 610

Query: 1055 IKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
             +  N I  I RL+  A +Y VW ERN R  S        L  ++ + +RLRL
Sbjct: 611  SRDKNVI-LITRLVHQAVLYLVWKERNTRVHSAIEKQPSSLIAEIKQVIRLRL 662



 Score = 89.0 bits (219), Expect(2) = 3e-36
 Identities = 42/136 (30%), Positives = 69/136 (50%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + W +   P   GGLG+K I+  N  + L+ IW + ++  ++WV WV+ NL+  ++FW L
Sbjct: 319  IAWESVCTPKEAGGLGLKRIADWNKVLGLKLIWLLFTAGGSLWVSWVRRNLMGEENFWLL 378

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                  SW WR I   R +A   V+  +G+G +   W+DNW   G L+ +   +    + 
Sbjct: 379  NPARRGSWIWRSICKMRTLARPMVVCEVGSGTSASFWQDNWTSRGPLIELVGDRGPQVTG 438

Query: 1555 HHLDARVSSCLVEGTW 1508
              + A V+  L  G W
Sbjct: 439  LSISAVVADGLTGGGW 454


>ref|XP_009113141.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 483

 Score = 95.5 bits (236), Expect(2) = 3e-36
 Identities = 46/138 (33%), Positives = 64/138 (46%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W     P  EGGLG++     N  + L+ IW ++S+  ++WV W Q   +  Q FW +
Sbjct: 124  VDWKTVCLPKEEGGLGLRSYLIWNQVLCLKFIWLLLSNTPSLWVDWHQSTHLTGQSFWTI 183

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
             A    SW WR++LD RP+A +F    +GNG NT  W D W   G L             
Sbjct: 184  NAAPTDSWAWRKLLDLRPLALRFCKSQLGNGKNTSFWHDVWTPLGQLRSFIGDAGPRSLR 243

Query: 1555 HHLDARVSSCLVEGTWNL 1502
                A V+  +    WNL
Sbjct: 244  VRTTAMVADTVTRSRWNL 261



 Score = 86.7 bits (213), Expect(2) = 3e-36
 Identities = 42/163 (25%), Positives = 75/163 (46%)
 Frame = -3

Query: 1394 EFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDP 1215
            +F    T+  LR ++  + W  ++WF   IP+H F +WV+    L T+ +L +WG+ +  
Sbjct: 302  DFRSSTTWEVLRPRQASQSWVDVVWFKGAIPKHSFNMWVANYDRLPTRSRLAAWGLPITS 361

Query: 1214 VCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSI 1035
             C  C+   E   HL  SC Y V                  +W + + W    +   + +
Sbjct: 362  SCPFCSNFDETRDHLLLSCEYSVAIWREIFIRCHPPASPFANWSELLSWI--RVATSSKL 419

Query: 1034 GTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 906
              +++L     +YHVW +RN    +Q S+PA  +F  +  ++R
Sbjct: 420  KLLRKLASQTMVYHVWKQRNNLIHNQTSVPAATVFRGIDRELR 462


>ref|XP_009117174.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 714

 Score = 92.8 bits (229), Expect(2) = 6e-36
 Identities = 49/173 (28%), Positives = 77/173 (44%)
 Frame = -3

Query: 1424 HGCVEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFK 1245
            H  +++ +   F    T+ A+R +   K W + +WF   IPRH F +W++    L TK +
Sbjct: 523  HWIIDSKDCKGFSSSKTWEAVRPRARTKGWARSVWFKGAIPRHVFNMWLANLNRLPTKVR 582

Query: 1244 LLSWGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWC 1065
            L SWG+ +   C LC+I  E   HLF  CSY                     W++ + W 
Sbjct: 583  LASWGLNISTTCCLCSIQDETRDHLFLQCSYSNVLWNLLFARLDPNHASFFSWEELLSWI 642

Query: 1064 VDHIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 906
               +   ++  T+K+L   A IY+VW +RN         P    F  +  D+R
Sbjct: 643  --RVSTTSAPSTLKKLATQALIYNVWRQRNAAVHLSGFAPVQTTFNSIDRDIR 693



 Score = 88.6 bits (218), Expect(2) = 6e-36
 Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W     P  EGGLG++  S  N  + LR IW + S  N++WV+W + + +++  FW L
Sbjct: 355  VAWKAVCLPKLEGGLGLRSFSEWNKVLCLRFIWLLFSGTNSLWVQWQKHHHLRSSSFWAL 414

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
            +     S  W  IL  RP+A +F+   + NG + K W D W   G L+         D+ 
Sbjct: 415  ERKNTDSASWNSILALRPLAQQFIKCKVINGTSAKFWFDTWTPFGQLIKFLGDSGPRDTR 474

Query: 1555 HHLDARVSSCLVEGTWNLS-PNLKNALG--------NFVTEVESIQTDHLICD 1424
              L A V     +  W L+ P   NAL         N   E  +  T H I D
Sbjct: 475  IPLSASVRDATNDTGWRLAQPRSDNALALHIHLTTINLPLEESTTDTFHWIID 527


>ref|XP_013651237.1| PREDICTED: uncharacterized protein LOC106355923 [Brassica napus]
          Length = 1597

 Score = 90.9 bits (224), Expect(2) = 2e-35
 Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
 Frame = -3

Query: 1373 YNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCNI 1194
            +N L  +E +  WHK IWF   IP+H FI W+     L T+ ++  WG+ V P C LC  
Sbjct: 1416 WNHLYEQEPEVNWHKSIWFKGRIPKHAFISWLVALDRLSTRDRMRQWGVLVSPTCPLCGT 1475

Query: 1193 MLEDDYHLFFSCSY--PVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKG---GNSIGT 1029
              E   H+FF C Y   V+             +I       + W    IKG    N++  
Sbjct: 1476 ADESRQHIFFDCGYSKEVWSFFYSTLRLSPPTLIMD----VLRW----IKGPTRDNNVNL 1527

Query: 1028 IKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
            I +L F A +Y VW ERN R  SQ S P+  L L++ + +R+++
Sbjct: 1528 ILKLAFQACVYLVWKERNSRLHSQVSRPSASLILEIKQLLRIKM 1571



 Score = 88.6 bits (218), Expect(2) = 2e-35
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W         GGLG++ +   N  + L+ IW + +S  ++WV WV+++LI A++FW +
Sbjct: 1228 VAWDIVCSATKSGGLGLRRLGLWNKIMGLKLIWLLFASSGSLWVSWVREHLIGAENFWNI 1287

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
             A    SW W+ +   R +A  FV+  IG+G++   W DNW   G L+     Q+  +S 
Sbjct: 1288 DATRSGSWIWKSLCKLRQLARPFVICEIGSGNSANFWHDNWTSLGPLI-----QLTGESG 1342

Query: 1555 HHLD-----ARVSSCLVEGTWNLSPN---------LKNALGNFVTEVESIQTDHLICDMV 1418
              L      A V   LV   W +S +         LKN L +   EV S + D    D  
Sbjct: 1343 PRLTGLPAMAVVRDALVGNRWWISSSRSRNPTICLLKNCLPDH-QEVVSSEAD----DRF 1397

Query: 1417 VWRLATRG---NFSSRIL 1373
            +W++        FSS ++
Sbjct: 1398 LWKVGDNAPVKGFSSSLM 1415


>ref|XP_013651236.1| PREDICTED: uncharacterized protein LOC106355921 [Brassica napus]
          Length = 1597

 Score = 90.9 bits (224), Expect(2) = 2e-35
 Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
 Frame = -3

Query: 1373 YNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCNI 1194
            +N L  +E +  WHK IWF   IP+H FI W+     L T+ ++  WG+ V P C LC  
Sbjct: 1416 WNHLYEQEPEVNWHKSIWFKGRIPKHAFISWLVALDRLSTRDRMRQWGVLVSPTCPLCGT 1475

Query: 1193 MLEDDYHLFFSCSY--PVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKG---GNSIGT 1029
              E   H+FF C Y   V+             +I       + W    IKG    N++  
Sbjct: 1476 ADESRQHIFFDCGYSKEVWSFFYSTLRLSPPTLIMD----VLRW----IKGPTRDNNVNL 1527

Query: 1028 IKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
            I +L F A +Y VW ERN R  SQ S P+  L L++ + +R+++
Sbjct: 1528 ILKLAFQACVYLVWKERNSRLHSQVSRPSASLILEIKQLLRIKM 1571



 Score = 88.6 bits (218), Expect(2) = 2e-35
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W         GGLG++ +   N  + L+ IW + +S  ++WV WV+++LI A++FW +
Sbjct: 1228 VAWDIVCSATKSGGLGLRRLGLWNKIMGLKLIWLLFASSGSLWVSWVREHLIGAENFWNI 1287

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
             A    SW W+ +   R +A  FV+  IG+G++   W DNW   G L+     Q+  +S 
Sbjct: 1288 DATRSGSWIWKSLCKLRQLARPFVICEIGSGNSANFWHDNWTSLGPLI-----QLTGESG 1342

Query: 1555 HHLD-----ARVSSCLVEGTWNLSPN---------LKNALGNFVTEVESIQTDHLICDMV 1418
              L      A V   LV   W +S +         LKN L +   EV S + D    D  
Sbjct: 1343 PRLTGLPAMAVVRDALVGNRWWISSSRSRNPTICLLKNCLPDH-QEVVSSEAD----DRF 1397

Query: 1417 VWRLATRG---NFSSRIL 1373
            +W++        FSS ++
Sbjct: 1398 LWKVGDNAPVKGFSSSLM 1415


>ref|XP_009144061.1| PREDICTED: uncharacterized protein LOC103867715 [Brassica rapa]
          Length = 1512

 Score = 94.7 bits (234), Expect(2) = 2e-35
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
 Frame = -3

Query: 1394 EFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDP 1215
            EF    T+ A+R++E +++W + IWF   +PRH F  WV  Q  L T+ +LL WGM + P
Sbjct: 1329 EFSTSKTWEAVRNREPEQQWTQSIWFKGHVPRHAFTAWVIYQDRLPTRSRLLKWGMNISP 1388

Query: 1214 VCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSI 1035
             C LC+  +ED  HLF +C                       W    +W    ++   + 
Sbjct: 1389 SCCLCDAAVEDRTHLFLNCEVSEGVWNLVLHRLGYSFRAFHTWTSFTEWV--SLRDTVTS 1446

Query: 1034 GTIKRLMFNAFIYHVWCERNRRT-FSQKSMPAGL--LFLKMIEDVRLRLATCKVYVP 873
             T+KRL+  A I ++W ERN R    +   PA +  L  + I+DV L     K + P
Sbjct: 1447 RTLKRLVAQATITNIWMERNSRLHVGEARSPATIFRLINRFIKDVILGKRKLKNFQP 1503



 Score = 84.7 bits (208), Expect(2) = 2e-35
 Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W     P  EGGLG++ I   N  + L+ IW+++   +++W  W+    +K + FW L
Sbjct: 1151 VSWKTVCLPRKEGGLGLRDIGLWNKNLCLKLIWNLLKKTDSLWASWLHHYRLKDESFWSL 1210

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                 +S  WR +L  R +A++F+   +GNG     W DNW   G L+  F         
Sbjct: 1211 DENKTTSSTWRSLLSLRGLASRFLRPKLGNGRCISFWYDNWTPLGPLLDRFGESGPRQLS 1270

Query: 1555 HHLDARVSSCLVEGTWNL----SPNLKNALGNFVTEVESIQTDHLICDMVVW 1412
              + A VS    +  W L    SP L   L  ++T V  I T +L+ D  VW
Sbjct: 1271 ISISATVSDACNDRGWLLRGARSP-LAEELQTYLTTV-PIPTLNLMDDTYVW 1320


>ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 660

 Score = 98.2 bits (243), Expect(2) = 3e-35
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
 Frame = -1

Query: 1927 KQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQD 1748
            K   V W +   P   GGLG+K +   N    ++ IW +    +++WV W++ +L++ + 
Sbjct: 279  KGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHLMEGKM 338

Query: 1747 FWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLM---GMFPP 1577
            FW        SW WR ++  R  A  F+L  + +G+    W DNW  +G L+   G   P
Sbjct: 339  FWVSDFANKGSWIWRNLMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLSVTGTLGP 398

Query: 1576 QMQFDSDHHLDARVSSCLVEGTWNLSPN-------LKNALGNFVTEVESIQTDHLICDMV 1418
            Q    S   +DA V S + E  WN+S +       L+ AL     +++S++ D+      
Sbjct: 399  QY---SGISIDASVHSVVTESGWNVSRSRNPTLTALRAALPAQTPDIDSVEVDYF----- 450

Query: 1417 VWR---LATRGNFSSRIL 1373
            VWR    A   NFS+  L
Sbjct: 451  VWRNSVSAQPSNFSTTTL 468



 Score = 80.9 bits (198), Expect(2) = 3e-35
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
 Frame = -3

Query: 1337 WHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCNIMLEDDYHLFFSC 1158
            W  ++WF + IP+H FI W+ ++  + T+ KL  WG+ V   C+LC    E   HLFF C
Sbjct: 481  WVSIVWFKNRIPKHAFIAWLVMRNRMSTRDKLRHWGLHVPAECLLCGAADETTSHLFFEC 540

Query: 1157 SYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIGTIKRLMFNAFIYHVWCER 978
              P               V++   +  + W    I G +   TI + +F A IY VW ER
Sbjct: 541  --PFSQEVWSGLMAGTGLVLSYKLEDMVVW-FQSILGDSKFKTIVKFIFQAVIYFVWKER 597

Query: 977  NRRTFSQ-KSMPAGLLFLKMIEDVRLRL 897
            N R  S  +  P     + +I+++RL++
Sbjct: 598  NGRLHSNGQKQP-----IFVIKEIRLQI 620


>ref|XP_013669512.1| PREDICTED: uncharacterized protein LOC106373948 [Brassica napus]
          Length = 1558

 Score = 91.3 bits (225), Expect(2) = 5e-35
 Identities = 45/140 (32%), Positives = 69/140 (49%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W++   P  EGGLG+  ++  N ++ L+ IW + +   ++W  W + N I  ++FW +
Sbjct: 1220 VSWSSVCLPKQEGGLGLCDLTIWNTSLCLKLIWLLHTENESLWAMWTKTNRIGDKNFWSI 1279

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                 +SW W+ IL  RPIA  F+   +GNGD    W  +W   G L  +F         
Sbjct: 1280 DESKQTSWIWKSILKLRPIAENFLKCEVGNGDKASFWFYDWSPMGRLFKLFGHSGPRQLG 1339

Query: 1555 HHLDARVSSCLVEGTWNLSP 1496
              ++A VS C     WNL P
Sbjct: 1340 VPINALVSLCCSSTGWNLRP 1359



 Score = 87.0 bits (214), Expect(2) = 5e-35
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
 Frame = -3

Query: 1376 TYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCN 1197
            T+  LRH   ++ W +++WF   IP H F++W++    L T+ +L SWG+++D  C +CN
Sbjct: 1381 TWEELRHHGQRQSWTRIVWFKGHIPSHAFMMWIAYLDCLPTRMQLASWGLQIDKSCCICN 1440

Query: 1196 IMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIGTIKRL 1017
               E   HLF  CS+              R  +   W     W            T+  L
Sbjct: 1441 HYQESRDHLFLRCSFSEQLWKLLMRRMGYRPFLFHTWTSMHSWL--ETADSTCPYTLCLL 1498

Query: 1016 MFNAFIYHVWCERNRRTF-SQKSMPAGLL 933
            +  A IY +W ERNRR   S  S P  LL
Sbjct: 1499 VVQATIYKIWAERNRRLHCSVSSTPQNLL 1527


>ref|XP_013669511.1| PREDICTED: uncharacterized protein LOC106373947 [Brassica napus]
          Length = 1558

 Score = 91.3 bits (225), Expect(2) = 5e-35
 Identities = 45/140 (32%), Positives = 69/140 (49%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            V W++   P  EGGLG+  ++  N ++ L+ IW + +   ++W  W + N I  ++FW +
Sbjct: 1220 VSWSSVCLPKQEGGLGLCDLTIWNTSLCLKLIWLLHTENESLWAMWTKTNRIGDKNFWSI 1279

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
                 +SW W+ IL  RPIA  F+   +GNGD    W  +W   G L  +F         
Sbjct: 1280 DESKQTSWIWKSILKLRPIAENFLKCEVGNGDKASFWFYDWSPMGRLFKLFGHSGPRQLG 1339

Query: 1555 HHLDARVSSCLVEGTWNLSP 1496
              ++A VS C     WNL P
Sbjct: 1340 VPINALVSLCCSSTGWNLRP 1359



 Score = 87.0 bits (214), Expect(2) = 5e-35
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
 Frame = -3

Query: 1376 TYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCN 1197
            T+  LRH   ++ W +++WF   IP H F++W++    L T+ +L SWG+++D  C +CN
Sbjct: 1381 TWEELRHHGQRQSWTRIVWFKGHIPSHAFMMWIAYLDCLPTRMQLASWGLQIDKSCCICN 1440

Query: 1196 IMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIGTIKRL 1017
               E   HLF  CS+              R  +   W     W            T+  L
Sbjct: 1441 HYQESRDHLFLRCSFSEQLWKLLMRRMGYRPFLFHTWTSMHSWL--ETADSTCPYTLCLL 1498

Query: 1016 MFNAFIYHVWCERNRRTF-SQKSMPAGLL 933
            +  A IY +W ERNRR   S  S P  LL
Sbjct: 1499 VVQATIYKIWAERNRRLHCSVSSTPQNLL 1527


>ref|XP_010524744.1| PREDICTED: uncharacterized protein LOC104802714 [Tarenaya
            hassleriana] gi|729458497|ref|XP_010524746.1| PREDICTED:
            uncharacterized protein LOC104802714 [Tarenaya
            hassleriana] gi|729458500|ref|XP_010524747.1| PREDICTED:
            uncharacterized protein LOC104802714 [Tarenaya
            hassleriana]
          Length = 712

 Score = 90.1 bits (222), Expect(2) = 5e-35
 Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
 Frame = -3

Query: 1412 EAGNTGEFFLK-DTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLS 1236
            ++G  G  F    T   LR    +  W+ L+WF   IPR  FI+W + Q  L TK +L+S
Sbjct: 514  KSGEFGTCFRSASTRYLLRPVNSQVPWYSLVWFKGAIPRMAFILWQAFQNRLPTKDRLVS 573

Query: 1235 WGMEVDPVCILCNIMLEDDYHLFFSCSY--PVFXXXXXXXXXXXRDVIAQDWDKQIDWCV 1062
            WGM++   CILCN+  E   H+FF CS+   V+            D I    +  + W  
Sbjct: 574  WGMQISTSCILCNLEQESHEHIFFKCSFSHDVWNPIANYCLPSPPDYI----EGCLPWVA 629

Query: 1061 D--HIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATC 888
            D  H +      T+ +L     +Y +W ERN R F  K+  A  + +K+   +R  L   
Sbjct: 630  DPSHARDRGQ-PTLAKLCIQLAVYELWRERNNRIFRDKARTATNIRMKIDRTMRDNLLAL 688

Query: 887  K 885
            K
Sbjct: 689  K 689



 Score = 88.2 bits (217), Expect(2) = 5e-35
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + W N   P  EGGLGI  +   N    LR IW + S  +++WV W+Q+N I+   FW  
Sbjct: 342  ISWKNICRPKREGGLGILKMEDINTTFRLRLIWLLFSQTDSLWVDWIQENAIRKHGFWDT 401

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSL---MGMFPPQMQF 1565
               T+ S+ +R++L  R +A KF+   +G+G     W D+W   G L   +G   P++  
Sbjct: 402  PVTTNVSYTFRKLLKLRDLARKFIRVKLGDGRKASFWFDSWTDLGPLITFVGDMGPRL-- 459

Query: 1564 DSDHHLDARVSSCLVEGTWNLSPNLKNALGNFVTEVE 1454
                 L     +C+ + T N S  L  A    V E++
Sbjct: 460  -----LQTSRQACVHDATTNRSWRLPPARSERVLELQ 491


>ref|XP_009144152.1| PREDICTED: uncharacterized protein LOC103867818 [Brassica rapa]
          Length = 1717

 Score = 92.8 bits (229), Expect(2) = 6e-35
 Identities = 45/163 (27%), Positives = 79/163 (48%)
 Frame = -3

Query: 1394 EFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDP 1215
            EF    T+  +R +E  K W  ++WF   +P+H F +WV+    L T+ +L+SWGM +  
Sbjct: 1536 EFRAATTWEVMRPREQAKDWVDVVWFKGAVPKHAFTMWVACWDRLPTRERLVSWGMHIAI 1595

Query: 1214 VCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSI 1035
             C LC+ + E   H+  SC Y                 I   W + + W  +   G   +
Sbjct: 1596 TCPLCSRVPETRDHMLLSCDYSTDVWKEVFIRCLPPSTILTTWAELLSWIRN--AGTADL 1653

Query: 1034 GTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 906
              ++++   A ++H+W +RN    +Q S+PA  +F+ +  +VR
Sbjct: 1654 KLLRKVATQAAVFHLWKQRNNVVHNQISIPAATVFVGLDREVR 1696



 Score = 85.1 bits (209), Expect(2) = 6e-35
 Identities = 40/138 (28%), Positives = 68/138 (49%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + W+    P  EGGLG++     N  + L+ IW ++S  +++W  W +   +  + FW +
Sbjct: 1358 ISWSTVCLPKQEGGLGLRSFLVWNQVLCLKFIWILLSKTHSLWSEWHRHIHLPNKCFWTI 1417

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
               ++ SW WRR+L  RP+A  F    +GNG     W D+W   G L+    PQ   +  
Sbjct: 1418 APASNDSWMWRRLLKLRPLALHFCKVSLGNGREASFWYDSWSPMGQLIEHIGPQGPRNLR 1477

Query: 1555 HHLDARVSSCLVEGTWNL 1502
               +A V+  +++  W L
Sbjct: 1478 IRHNAVVADAIIDDHWAL 1495


>ref|XP_009132217.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 541

 Score = 95.1 bits (235), Expect(2) = 6e-35
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
 Frame = -1

Query: 1945 GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDN 1766
            G +L   +  V W +  +P  EGGLG++ +   N    L+ IW +++ + ++WVRWVQ  
Sbjct: 166  GPDLKTTKAKVSWQDICYPKEEGGLGLRPLKELNKVYGLKLIWRLLA-ETSLWVRWVQCY 224

Query: 1765 LIKAQDFWYLKAPTDS-SWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMG 1589
            L++   FW +K  T S SW WR++L  R +A +++   + NG+NT  W D+W     L  
Sbjct: 225  LVRKGSFWSIKENTSSGSWVWRKLLKLRGLAKQYIKKEVRNGENTSFWYDSWSRFDILKD 284

Query: 1588 MFPPQMQFD---SDHHLDARVSSCLVEGT--WNLSPNLKNALGNFVTEVESIQTDHLICD 1424
            M   +   D    DH+  A V    +  +   N   ++ N +   ++ +E+   +    D
Sbjct: 285  MLGERGSLDLGVPDHYSVAEVKRSRMRSSRRRNHRVDILNQIEEVISRLENGNEE----D 340

Query: 1423 MVVWRLAT---RGNFSS 1382
            +V+W+ A    R NFS+
Sbjct: 341  IVLWKHAEGKFRTNFST 357



 Score = 82.8 bits (203), Expect(2) = 6e-35
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
 Frame = -3

Query: 1391 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1212
            F    T++ +R+ +    WHK +WFP   P++ F +WV+++  L+T  ++  W   ++  
Sbjct: 355  FSTSKTWDQIRNVKPICTWHKGVWFPQSTPKYAFTMWVAIKGRLQTTDRMQQWNSSINTT 414

Query: 1211 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIG 1032
            C+LCN + E   HLFF C Y              RD    DW + I      I   + + 
Sbjct: 415  CVLCNDVPESCAHLFFGCRYSE-RIWRKLAEGLMRDAFTVDWSELIS-----IVSKSWVT 468

Query: 1031 TIK----RLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCK 885
             IK    R +  A +Y +W ERN R   +K      L   + + +RL+L + K
Sbjct: 469  PIKTFILRYVLQATVYTIWWERNARRHGEKPRDINGLIKLVDKYMRLKLLSLK 521


>ref|XP_010521406.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104800308
            [Tarenaya hassleriana]
          Length = 1816

 Score = 93.2 bits (230), Expect(2) = 1e-34
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
 Frame = -3

Query: 1391 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1212
            F    T+  LR+ + K  W+ L+WF   IPR+  ++W ++ + L TK +LL+WG++VD +
Sbjct: 1175 FSSASTWKQLRNPKPKVPWYDLVWFKLAIPRYSIVLWQAISQRLPTKDRLLNWGIQVDAI 1234

Query: 1211 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDK---QIDWCVDHIKG-- 1047
            CILC    E   HLFF+C Y                 + + W      I  C   +KG  
Sbjct: 1235 CILCEEAQESHTHLFFACPY---------ASALWNHYVGRCWPSPPADIQLCTSWLKGQA 1285

Query: 1046 --GNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 897
                +   I RL+    +Y VW ERN R F+ +         +M+ ++RL +
Sbjct: 1286 DTSRNRCLIGRLIIQVIVYEVWRERNARIFTGQR--------RMLHEIRLHI 1329



 Score = 84.0 bits (206), Expect(2) = 1e-34
 Identities = 39/140 (27%), Positives = 70/140 (50%)
 Frame = -1

Query: 1915 VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYL 1736
            + WT+   P +EGGLGI+ +   N+   L+ IW+++S   ++W  W   +L+K   +W  
Sbjct: 995  IAWTSVCLPRNEGGLGIRKLEEQNLVFRLKLIWNLLSKSGSLWYAWSAKHLLKGGSYWTC 1054

Query: 1735 KAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSD 1556
            K   + SW + +++    I   F    +G+G ++  W D+WL  G L+ +   +    + 
Sbjct: 1055 KPSQNQSWNFNKLVHLVAIVRTFHRKQVGDGRDSLFWYDHWLSLGPLITLTGDRGPSLTQ 1114

Query: 1555 HHLDARVSSCLVEGTWNLSP 1496
                A VS+   +  WNL P
Sbjct: 1115 ICKSASVSAATADNHWNLPP 1134