BLASTX nr result

ID: Papaver30_contig00026405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00026405
         (1082 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012451053.1| PREDICTED: nuclear pore complex protein NUP1...    51   9e-06
gb|KJB64743.1| hypothetical protein B456_010G063000 [Gossypium r...    51   9e-06
gb|KJB64742.1| hypothetical protein B456_010G063000 [Gossypium r...    51   1e-05

>ref|XP_012451053.1| PREDICTED: nuclear pore complex protein NUP1 [Gossypium raimondii]
           gi|763797786|gb|KJB64741.1| hypothetical protein
           B456_010G063000 [Gossypium raimondii]
          Length = 743

 Score = 51.2 bits (121), Expect(2) = 9e-06
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = -3

Query: 237 YRGTSLNR-FESSDASMDISRINN--QNHEIGRSTNADTDFQMANNISPSSVGISPVHPQ 67
           Y  +SLN  F   ++++  S+ ++  +N E G + ++ +D Q  +    S +GI PVHP 
Sbjct: 405 YSHSSLNDPFPVGNSNVSKSQFSSIKKNLEQGGAISS-SDIQSVDGNRSSEMGIPPVHPH 463

Query: 66  SSDVATRILEHLDRTIPTPQKK 1
           SS +A  ILEHL+RT+ TP+KK
Sbjct: 464 SSQMARTILEHLERTLVTPKKK 485



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -2

Query: 292 DKGFGSLGPIRR 257
           DKG+GS+GPIRR
Sbjct: 378 DKGYGSVGPIRR 389


>gb|KJB64743.1| hypothetical protein B456_010G063000 [Gossypium raimondii]
          Length = 739

 Score = 51.2 bits (121), Expect(2) = 9e-06
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = -3

Query: 237 YRGTSLNR-FESSDASMDISRINN--QNHEIGRSTNADTDFQMANNISPSSVGISPVHPQ 67
           Y  +SLN  F   ++++  S+ ++  +N E G + ++ +D Q  +    S +GI PVHP 
Sbjct: 405 YSHSSLNDPFPVGNSNVSKSQFSSIKKNLEQGGAISS-SDIQSVDGNRSSEMGIPPVHPH 463

Query: 66  SSDVATRILEHLDRTIPTPQKK 1
           SS +A  ILEHL+RT+ TP+KK
Sbjct: 464 SSQMARTILEHLERTLVTPKKK 485



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -2

Query: 292 DKGFGSLGPIRR 257
           DKG+GS+GPIRR
Sbjct: 378 DKGYGSVGPIRR 389


>gb|KJB64742.1| hypothetical protein B456_010G063000 [Gossypium raimondii]
           gi|763797789|gb|KJB64744.1| hypothetical protein
           B456_010G063000 [Gossypium raimondii]
          Length = 584

 Score = 51.2 bits (121), Expect(2) = 1e-05
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = -3

Query: 237 YRGTSLNR-FESSDASMDISRINN--QNHEIGRSTNADTDFQMANNISPSSVGISPVHPQ 67
           Y  +SLN  F   ++++  S+ ++  +N E G + ++ +D Q  +    S +GI PVHP 
Sbjct: 246 YSHSSLNDPFPVGNSNVSKSQFSSIKKNLEQGGAISS-SDIQSVDGNRSSEMGIPPVHPH 304

Query: 66  SSDVATRILEHLDRTIPTPQKK 1
           SS +A  ILEHL+RT+ TP+KK
Sbjct: 305 SSQMARTILEHLERTLVTPKKK 326



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -2

Query: 292 DKGFGSLGPIRR 257
           DKG+GS+GPIRR
Sbjct: 219 DKGYGSVGPIRR 230


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