BLASTX nr result
ID: Papaver30_contig00023087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00023087
(746 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 269 1e-69
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,... 269 1e-69
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,... 269 1e-69
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,... 269 1e-69
gb|AKC88770.1| sigma factor [Francoa sonchifolia] 259 2e-66
gb|AKC88774.1| sigma factor [Melianthus villosus] 257 5e-66
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,... 254 6e-65
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 254 6e-65
ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,... 251 3e-64
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,... 251 3e-64
emb|CDP06761.1| unnamed protein product [Coffea canephora] 249 1e-63
ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF,... 247 5e-63
ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF,... 247 5e-63
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei... 247 5e-63
ref|XP_011094632.1| PREDICTED: RNA polymerase sigma factor sigF,... 247 7e-63
ref|XP_011094631.1| PREDICTED: RNA polymerase sigma factor sigF,... 247 7e-63
ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF,... 246 1e-62
ref|XP_011624483.1| PREDICTED: RNA polymerase sigma factor sigF,... 245 3e-62
gb|ERM94834.1| hypothetical protein AMTR_s00009p00072720 [Ambore... 245 3e-62
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [... 244 4e-62
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 269 bits (688), Expect = 1e-69
Identities = 127/184 (69%), Positives = 160/184 (86%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RKAIF +S++IRLPENVY+ L QVK AK++ I+EGH PTNEE+AK+VG T
Sbjct: 341 YAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGIT 400
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
VEKLERL ++T+ PLS+Q+P+W+DQ TTFQ +TAD +VE P+ V+K LMR+HVRNL+S+
Sbjct: 401 VEKLERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISI 460
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
LPPKE+RIIR+RYGIE+ E KSL +IG +FGLSKERVRQLE+RAL KL+ CLSSQGL AY
Sbjct: 461 LPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAY 520
Query: 541 TNLL 552
+LL
Sbjct: 521 ADLL 524
>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Nelumbo nucifera]
Length = 540
Score = 269 bits (688), Expect = 1e-69
Identities = 127/184 (69%), Positives = 160/184 (86%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RKAIF +S++IRLPENVY+ L QVK AK++ I+EGH PTNEE+AK+VG T
Sbjct: 356 YAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGIT 415
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
VEKLERL ++T+ PLS+Q+P+W+DQ TTFQ +TAD +VE P+ V+K LMR+HVRNL+S+
Sbjct: 416 VEKLERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISI 475
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
LPPKE+RIIR+RYGIE+ E KSL +IG +FGLSKERVRQLE+RAL KL+ CLSSQGL AY
Sbjct: 476 LPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAY 535
Query: 541 TNLL 552
+LL
Sbjct: 536 ADLL 539
>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Nelumbo nucifera]
Length = 565
Score = 269 bits (688), Expect = 1e-69
Identities = 127/184 (69%), Positives = 160/184 (86%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RKAIF +S++IRLPENVY+ L QVK AK++ I+EGH PTNEE+AK+VG T
Sbjct: 381 YAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGIT 440
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
VEKLERL ++T+ PLS+Q+P+W+DQ TTFQ +TAD +VE P+ V+K LMR+HVRNL+S+
Sbjct: 441 VEKLERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISI 500
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
LPPKE+RIIR+RYGIE+ E KSL +IG +FGLSKERVRQLE+RAL KL+ CLSSQGL AY
Sbjct: 501 LPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAY 560
Query: 541 TNLL 552
+LL
Sbjct: 561 ADLL 564
>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Nelumbo nucifera]
Length = 568
Score = 269 bits (688), Expect = 1e-69
Identities = 127/184 (69%), Positives = 160/184 (86%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RKAIF +S++IRLPENVY+ L QVK AK++ I+EGH PTNEE+AK+VG T
Sbjct: 384 YAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEGHHPTNEELAKRVGIT 443
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
VEKLERL ++T+ PLS+Q+P+W+DQ TTFQ +TAD +VE P+ V+K LMR+HVRNL+S+
Sbjct: 444 VEKLERLFMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISI 503
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
LPPKE+RIIR+RYGIE+ E KSL +IG +FGLSKERVRQLE+RAL KL+ CLSSQGL AY
Sbjct: 504 LPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAY 563
Query: 541 TNLL 552
+LL
Sbjct: 564 ADLL 567
>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
Length = 549
Score = 259 bits (661), Expect = 2e-66
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ+VRKAIF HS++IRLPENVY L +V AK+ I+EG H+PT EE+A++VG
Sbjct: 364 YAYWWIRQTVRKAIFQHSRTIRLPENVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGI 423
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
TVEKLE+LL TT+ PLSMQ+P+W+ Q TTFQ + AD ++E P+ V K +MRQHVRNLLS
Sbjct: 424 TVEKLEKLLYTTRMPLSMQQPVWAGQDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLS 483
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L PKE+RIIRLR+GIEDG+QKSL++IG VFGLSKERVRQLE+RAL +L+ CLSSQGL A
Sbjct: 484 ILSPKERRIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLESRALYRLKQCLSSQGLGA 543
Query: 538 YTNLL 552
YT+LL
Sbjct: 544 YTDLL 548
>gb|AKC88774.1| sigma factor [Melianthus villosus]
Length = 538
Score = 257 bits (657), Expect = 5e-66
Identities = 126/185 (68%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQSVRKAIF HS++IRLPENVY L +V AK + I+EG H PT E+IA ++G
Sbjct: 353 YAYWWIRQSVRKAIFQHSRTIRLPENVYGLLAKVLEAKRLYIQEGNHHPTKEDIAGRIGI 412
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
TV+KLERLL TT+ PLS+Q+P+W+DQ TTFQ VTAD VE P+ V K LMR+H+R LL
Sbjct: 413 TVDKLERLLATTRMPLSIQQPVWADQNTTFQEVTADTAVEIPDISVGKQLMRKHMRGLLG 472
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L KE+RIIRLR+GIEDGEQKSL++IG +FGLSKERVRQLE+RAL +L+ CLSSQGLEA
Sbjct: 473 ILSSKERRIIRLRFGIEDGEQKSLSEIGAIFGLSKERVRQLESRALHRLKQCLSSQGLEA 532
Query: 538 YTNLL 552
Y N+L
Sbjct: 533 YVNML 537
>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Vitis
vinifera]
Length = 567
Score = 254 bits (648), Expect = 6e-65
Identities = 125/185 (67%), Positives = 154/185 (83%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGF 177
YAYWWIRQ+VRKAIF HS++IRLPEN+Y+ L +VK AK + I+EGH PT EEIA++VG
Sbjct: 382 YAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGI 441
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
T+EKL+RLL+ T+ PLSMQ+P+W+DQ TTFQ VTAD +E P+ V+K LMRQHVRNLL
Sbjct: 442 TIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLH 501
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL PKE+RIIRLR+GI DG ++L++IG VFG SKERVRQLE RAL KL+ CLSS GLE+
Sbjct: 502 VLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLES 561
Query: 538 YTNLL 552
YT+LL
Sbjct: 562 YTDLL 566
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 254 bits (648), Expect = 6e-65
Identities = 125/185 (67%), Positives = 154/185 (83%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGF 177
YAYWWIRQ+VRKAIF HS++IRLPEN+Y+ L +VK AK + I+EGH PT EEIA++VG
Sbjct: 376 YAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGI 435
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
T+EKL+RLL+ T+ PLSMQ+P+W+DQ TTFQ VTAD +E P+ V+K LMRQHVRNLL
Sbjct: 436 TIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLH 495
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL PKE+RIIRLR+GI DG ++L++IG VFG SKERVRQLE RAL KL+ CLSS GLE+
Sbjct: 496 VLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLES 555
Query: 538 YTNLL 552
YT+LL
Sbjct: 556 YTDLL 560
>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Erythranthe guttatus]
Length = 558
Score = 251 bits (642), Expect = 3e-64
Identities = 121/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQS+RK++F HS++IRLPENVY L +V AK+ IK+G HQPT E+IA G
Sbjct: 373 YAYWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGL 432
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
+VEKL+RLL T++ PLSMQ+P+W DQ TTFQ +TAD VE P+ G SK +MRQH RNLLS
Sbjct: 433 SVEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLS 492
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL P+E++IIRLR+GIEDGEQKSL+ IG FGLSKER+RQ+E+RAL KL+ CLSS GL A
Sbjct: 493 VLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSA 552
Query: 538 YTNLL 552
Y +L
Sbjct: 553 YAEML 557
>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Erythranthe guttatus] gi|604329105|gb|EYU34473.1|
hypothetical protein MIMGU_mgv1a003862mg [Erythranthe
guttata]
Length = 559
Score = 251 bits (642), Expect = 3e-64
Identities = 121/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQS+RK++F HS++IRLPENVY L +V AK+ IK+G HQPT E+IA G
Sbjct: 374 YAYWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGL 433
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
+VEKL+RLL T++ PLSMQ+P+W DQ TTFQ +TAD VE P+ G SK +MRQH RNLLS
Sbjct: 434 SVEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLS 493
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL P+E++IIRLR+GIEDGEQKSL+ IG FGLSKER+RQ+E+RAL KL+ CLSS GL A
Sbjct: 494 VLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSA 553
Query: 538 YTNLL 552
Y +L
Sbjct: 554 YAEML 558
>emb|CDP06761.1| unnamed protein product [Coffea canephora]
Length = 556
Score = 249 bits (637), Expect = 1e-63
Identities = 122/185 (65%), Positives = 150/185 (81%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ++RKAIF HS++IRLP+NVY L +VK AK++ I++G H PT EEIA G
Sbjct: 371 YAYWWIRQAIRKAIFQHSRTIRLPDNVYGLLSKVKEAKKLCIQQGIHSPTKEEIASCAGI 430
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
TVEKLE+LL T + PLSMQ+P+W DQ TTFQ VTAD +E + VSK LMR H+RNLL
Sbjct: 431 TVEKLEKLLFTARMPLSMQQPVWMDQDTTFQEVTADTAIEASDLSVSKQLMRIHIRNLLR 490
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L PKE++IIRLR+GIEDG+QKSL++IG VFGLSKERVRQLE RAL KL+ CL+SQGL A
Sbjct: 491 ILNPKERKIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLETRALYKLKQCLNSQGLNA 550
Query: 538 YTNLL 552
Y ++L
Sbjct: 551 YADML 555
>ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Populus euphratica]
Length = 557
Score = 247 bits (631), Expect = 5e-63
Identities = 119/185 (64%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ++ KAIF HS++IRLPENVY L +V AK I+EG HQPT EEIA++VG
Sbjct: 372 YAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTTEEIARRVGI 431
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
++KLE+LL T+TPLSMQ+ +WSDQ TTFQ +TAD ++E P+ V+K LMR+H+R LL+
Sbjct: 432 AIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDVSVAKQLMRKHIRGLLN 491
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L KE+RIIRLR+GIEDG+QKSL++IG+VFGLSKERVRQLE+RAL KL+ C+ S GL+A
Sbjct: 492 ILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDA 551
Query: 538 YTNLL 552
Y +LL
Sbjct: 552 YADLL 556
>ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Populus euphratica] gi|743810385|ref|XP_011018729.1|
PREDICTED: RNA polymerase sigma factor sigF,
chloroplastic isoform X1 [Populus euphratica]
gi|743810387|ref|XP_011018730.1| PREDICTED: RNA
polymerase sigma factor sigF, chloroplastic isoform X1
[Populus euphratica]
Length = 570
Score = 247 bits (631), Expect = 5e-63
Identities = 119/185 (64%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ++ KAIF HS++IRLPENVY L +V AK I+EG HQPT EEIA++VG
Sbjct: 385 YAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTTEEIARRVGI 444
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
++KLE+LL T+TPLSMQ+ +WSDQ TTFQ +TAD ++E P+ V+K LMR+H+R LL+
Sbjct: 445 AIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDVSVAKQLMRKHIRGLLN 504
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L KE+RIIRLR+GIEDG+QKSL++IG+VFGLSKERVRQLE+RAL KL+ C+ S GL+A
Sbjct: 505 ILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDA 564
Query: 538 YTNLL 552
Y +LL
Sbjct: 565 YADLL 569
>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
FACTOR family protein [Populus trichocarpa]
Length = 535
Score = 247 bits (631), Expect = 5e-63
Identities = 119/185 (64%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ++ KAIF HS++IRLPENVY L +V AK I+EG HQPT EEIA++VG
Sbjct: 350 YAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGI 409
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
++KLE+LL T+TPLSMQ+ +WSDQ TTFQ +TAD ++E P+ V+K LMR+H+R LL+
Sbjct: 410 AIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLN 469
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L KE+RIIRLR+GIEDG+QKSL++IG+VFGLSKERVRQLE+RAL KL+ C+ S GL+A
Sbjct: 470 ILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDA 529
Query: 538 YTNLL 552
Y +LL
Sbjct: 530 YADLL 534
>ref|XP_011094632.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Sesamum indicum] gi|747093636|ref|XP_011094633.1|
PREDICTED: RNA polymerase sigma factor sigF,
chloroplastic isoform X2 [Sesamum indicum]
Length = 496
Score = 247 bits (630), Expect = 7e-63
Identities = 119/185 (64%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQS+RKA+F HS++IRLPENVY+ L +V AK++ I++G H PT E+IA G
Sbjct: 311 YAYWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGM 370
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
+VE LERLL T + PLS+Q+P+W+DQ TTFQ +TAD +E P+ GV+K LMRQH+RNLLS
Sbjct: 371 SVEGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLS 430
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL P+E++IIRLR+GIE GEQKSL++IG FGLSKERVRQLE+RAL KL+ CL S GL A
Sbjct: 431 VLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLGSHGLAA 490
Query: 538 YTNLL 552
Y N++
Sbjct: 491 YANMI 495
>ref|XP_011094631.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Sesamum indicum]
Length = 561
Score = 247 bits (630), Expect = 7e-63
Identities = 119/185 (64%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQS+RKA+F HS++IRLPENVY+ L +V AK++ I++G H PT E+IA G
Sbjct: 376 YAYWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGM 435
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
+VE LERLL T + PLS+Q+P+W+DQ TTFQ +TAD +E P+ GV+K LMRQH+RNLLS
Sbjct: 436 SVEGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLS 495
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
VL P+E++IIRLR+GIE GEQKSL++IG FGLSKERVRQLE+RAL KL+ CL S GL A
Sbjct: 496 VLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLGSHGLAA 555
Query: 538 YTNLL 552
Y N++
Sbjct: 556 YANMI 560
>ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
guineensis]
Length = 570
Score = 246 bits (628), Expect = 1e-62
Identities = 116/184 (63%), Positives = 150/184 (81%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQS+R+AIF +S+ IRLPENV+ L+++KNA+ + I+EGH PTNEEIAK+VG +
Sbjct: 386 YAYWWIRQSIRRAIFLNSRVIRLPENVFGLLKRIKNARRLFIQEGHAPTNEEIAKRVGIS 445
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
VEKLE LL+TT+ P+S+Q +W+DQ FQ +TADP VETPE ++K +MRQHVR LL +
Sbjct: 446 VEKLEALLLTTRNPISIQECVWTDQDVKFQEITADPGVETPELSIAKQMMRQHVRGLLRI 505
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
L P+E++II+ R+GI + EQKSL +IG +FGLSKERVRQLE+RALDKL+ CL S GL AY
Sbjct: 506 LKPRERQIIQYRFGIPNNEQKSLTEIGAMFGLSKERVRQLESRALDKLKGCLPSHGLGAY 565
Query: 541 TNLL 552
LL
Sbjct: 566 LELL 569
>ref|XP_011624483.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Amborella trichopoda]
Length = 581
Score = 245 bits (625), Expect = 3e-62
Identities = 109/184 (59%), Positives = 155/184 (84%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RK++F +S++IRLPENVY L ++KNA+ + +EGH+PTNEE+A++VG T
Sbjct: 397 YAYWWIRQAIRKSLFQNSRTIRLPENVYGLLTKIKNARRLYFQEGHRPTNEELAQRVGIT 456
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
V+KLE + V +K P+S+Q+P+WSDQ T Q +TADPKVETPE+ V+K LMR+HVRNLLS+
Sbjct: 457 VDKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPEKNVAKQLMRRHVRNLLSL 516
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
L P+E+++I LR+GI+ E+KSL++IG +F +SKER+RQ+E++AL+KL+NC +QGLE Y
Sbjct: 517 LNPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVESKALEKLKNCTQTQGLEVY 576
Query: 541 TNLL 552
LL
Sbjct: 577 AELL 580
>gb|ERM94834.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
Length = 573
Score = 245 bits (625), Expect = 3e-62
Identities = 109/184 (59%), Positives = 155/184 (84%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFT 180
YAYWWIRQ++RK++F +S++IRLPENVY L ++KNA+ + +EGH+PTNEE+A++VG T
Sbjct: 389 YAYWWIRQAIRKSLFQNSRTIRLPENVYGLLTKIKNARRLYFQEGHRPTNEELAQRVGIT 448
Query: 181 VEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLSV 360
V+KLE + V +K P+S+Q+P+WSDQ T Q +TADPKVETPE+ V+K LMR+HVRNLLS+
Sbjct: 449 VDKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPEKNVAKQLMRRHVRNLLSL 508
Query: 361 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 540
L P+E+++I LR+GI+ E+KSL++IG +F +SKER+RQ+E++AL+KL+NC +QGLE Y
Sbjct: 509 LNPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVESKALEKLKNCTQTQGLEVY 568
Query: 541 TNLL 552
LL
Sbjct: 569 AELL 572
>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 548
Score = 244 bits (623), Expect = 4e-62
Identities = 120/185 (64%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 YAYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGF 177
YAYWWIRQ+VRKAIF HS++IRLPENVY+ L +V AK I EG H PT EE+AK++G
Sbjct: 363 YAYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGI 422
Query: 178 TVEKLERLLVTTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRQHVRNLLS 357
T +LERLL + PLSMQ+ +W+DQ TTFQ +TAD +VE PE V+K LMR+HV +LL+
Sbjct: 423 TTVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLN 482
Query: 358 VLPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEA 537
+L P+E++IIRLRYGIEDG++KSL++IG VFGLSKERVRQLE+RAL KL+ CL+S GLEA
Sbjct: 483 ILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEA 542
Query: 538 YTNLL 552
Y +LL
Sbjct: 543 YADLL 547