BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00021417
         (1334 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   484   e-134
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   484   e-134
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   480   e-132
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   478   e-132
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   474   e-131
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   473   e-130
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   473   e-130
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ...   463   e-127
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   462   e-127
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   462   e-127
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   462   e-127
gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   461   e-127
gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   461   e-127
gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   461   e-127
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   461   e-127
gb|AKC88633.1| sigma factor [Melianthus villosus]                     460   e-126
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   457   e-126
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   456   e-125
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   451   e-124
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   451   e-124

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  484 bits (1247), Expect = e-134
 Identities = 273/411 (66%), Positives = 317/411 (77%), Gaps = 8/411 (1%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           +FYYSD+TEKL + +EHGLT Y Q+ S KT LI AKK+S+ +
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHY-QITSTKT-LIVAKKSSN-Y 57

Query: 1031 GPNFPS-NRHTQSINALTEHLESSSVPSTA-DEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            GP+FPS NR+TQSI AL EH++++S PSTA  +F    D                 A+LL
Sbjct: 58   GPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVE----ALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKN-HVSNLTVL 681
            LQKSMLEKQWNLSFER  +      +S K I V  SG+SAR+RRI+ R KN   S  TV 
Sbjct: 114  LQKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQ 173

Query: 680  RR-----KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
                   K  + PELL NRL+GYVKGVVSEELL+H EVV LS  IKAGLSLEDHKSRLKE
Sbjct: 174  ANVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG +PSDEQ+ATS++I R ELQ+  + CSLAREKLAMSNVRLVMSIAQ+YD+MGAE+AD
Sbjct: 234  RLGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGF+ISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAKIRLEE G+TPS+DRIAE LN+S+KKV NATEAVSK+FSLDREAFPS+
Sbjct: 354  RNAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSL 404


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  484 bits (1245), Expect = e-134
 Identities = 264/409 (64%), Positives = 317/409 (77%), Gaps = 6/409 (1%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           +FYYSD+T++L +V++HGL QY   A+   ++I A+K+S+ F
Sbjct: 1    MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQ--ATSAKNVIIARKSSN-F 57

Query: 1031 GPNFPSNRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILLLQ 852
            G +FPSN+H QSI AL EH+ + S PSTAD +  S                   A+LLLQ
Sbjct: 58   GDSFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVD---ALLLLQ 114

Query: 851  KSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR-- 678
            K +LEKQWNLSFE+  T    GEE++K I+V RSG+SAR+RR STR        ++++  
Sbjct: 115  KFLLEKQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPT 174

Query: 677  RKKQIG----PELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKERL 510
            ++KQ+G    PELL +   GYVKGV+SEELLTH EVV LS KIKAGLSLE+HK RLKERL
Sbjct: 175  KRKQLGSMVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERL 233

Query: 509  GYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLV 330
            G +PSDEQLA+S+RI R ELQ+ ++ECSLAREKL MSNVRLVMSIAQKYD+MGAE+ADLV
Sbjct: 234  GCDPSDEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMADLV 293

Query: 329  QGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIRN 150
            QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LIRN
Sbjct: 294  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCLIRN 353

Query: 149  AKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            AKIRL E GITPS+DRIAECLNMS+KKV NATEAV+K+FSLDREAFPS+
Sbjct: 354  AKIRLAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSL 402


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
            polymerase sigma factor sigA [Jatropha curcas]
            gi|643732469|gb|KDP39565.1| hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  480 bits (1235), Expect = e-132
 Identities = 260/410 (63%), Positives = 313/410 (76%), Gaps = 7/410 (1%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           +FYYSD+TEKL+NV++HGLT Y    S  T  +   K S ++
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQ---SSSTKNVIVAKKSSNY 57

Query: 1031 GPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILLL 855
            G +F S NR+ QSI AL EH++++S PSTA   +   +                EA+LLL
Sbjct: 58   GSSFQSSNRNAQSIKALKEHVDTASSPSTAATGF---ETFVDIEEASSDLDYSVEALLLL 114

Query: 854  QKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLRR 675
            QKSMLEKQWNLSFER  +      +S K I +  SG+SAR+RRI+TR KN + + ++++ 
Sbjct: 115  QKSMLEKQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQA 174

Query: 674  ------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKER 513
                  K  + PELL NRL+GYVKG+VSEELLTH EVV LS  IKAGLSLE+HKSRLK+R
Sbjct: 175  SGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDR 234

Query: 512  LGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADL 333
            LG +PSDEQLATS+RI   +L++ L+ CSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADL
Sbjct: 235  LGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 294

Query: 332  VQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIR 153
            VQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LIR
Sbjct: 295  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354

Query: 152  NAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            NAKIRLEE G+TPS+DRIAE LNMS+KKV NATEA+SK+FSLDREAFPS+
Sbjct: 355  NAKIRLEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSL 404


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
            gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  478 bits (1230), Expect = e-132
 Identities = 264/409 (64%), Positives = 314/409 (76%), Gaps = 6/409 (1%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           +FYYSD+T++L +V++HGL QY Q A  K S++ AKK+S+ F
Sbjct: 11   MATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQY-QTAPSK-SVVIAKKSSN-F 67

Query: 1031 GPNFPSNRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILLLQ 852
              +F SNRH QSI AL EHL + S  ST D +  + D                 A+LLLQ
Sbjct: 68   DHDFASNRHNQSIKALKEHLNTFST-STEDMWLQTSDHLEEGNSDLDYSLE---ALLLLQ 123

Query: 851  KSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNK--NHVSNLTVLR 678
            KS+LEKQWNLSFE+        EE+ K I+V RSG+SAR+RR +TR K  N  S++    
Sbjct: 124  KSLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTT 183

Query: 677  RKKQIGP----ELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKERL 510
            R++ +G     ELL +RL+GYVKGV+SEELLTH+EVV LS KIK G+SLE+HK RLKERL
Sbjct: 184  RRRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERL 243

Query: 509  GYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLV 330
            G EPSDEQLATS+RI R ELQ  ++ECSLAREK+AMSNVRLVMSIA KYD+MGAE+ADLV
Sbjct: 244  GCEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGAEMADLV 303

Query: 329  QGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIRN 150
            QGGLIGLLRGIEKFDS+KG KISTYVYWWIRQGVSRAL+ENSR+LRLPSH+HERLSLIRN
Sbjct: 304  QGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHERLSLIRN 363

Query: 149  AKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            AKIRLEE GITPS+DRIAECLN+S+KKV NATEAV+K+ SLDREAFPS+
Sbjct: 364  AKIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSL 412


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
            polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  474 bits (1220), Expect = e-131
 Identities = 260/411 (63%), Positives = 319/411 (77%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSD+TEKL +V++HG+T Y   A+ K +++ AKK+S+ 
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGIT-YCPTATTK-NVVVAKKSSN- 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            +GPNFPS NR++ SI AL EH++++S  S    ++ + D                EA+LL
Sbjct: 58   YGPNFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER  +   + +++NK I V  SG+SAR+RR++ R KN   +  + +
Sbjct: 115  LQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQ 174

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
                   +  I P+LL NRL+GYVKGVVS+E+L HTEVV LS  I+AGLS EDHKSRLKE
Sbjct: 175  SSDFKFLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKE 234

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPSDEQ+A S+RI R +LQA L++CSLAREKLAMSNVRLVMSIAQKYD+MGAE+AD
Sbjct: 235  RLGCEPSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMAD 294

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL++NSR+LRLP+HLHERL LI
Sbjct: 295  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLI 354

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAKIRLEE G+TPS+DRIAE LNMS++KV NATEA+SK+FSLDREAFPS+
Sbjct: 355  RNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSL 405


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  473 bits (1218), Expect = e-130
 Identities = 262/413 (63%), Positives = 319/413 (77%), Gaps = 9/413 (2%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSD+TEKL NV++HG+T Y+  A+ K ++I AKK+S+ 
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN- 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            +GP+FPS NR++ SI AL EH++++S  S    ++ + D                EA+LL
Sbjct: 58   YGPSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNH-------- 702
            LQKSMLEKQWNLSFER  +   + +++NK I V  SG+SAR+RR++ R KN         
Sbjct: 115  LQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQ 174

Query: 701  VSNLTVLRRKKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRL 522
             S+   LR      P+LL NRL+GYVKGVVS+E+L HTEVV LS  I+AGLS EDHKSRL
Sbjct: 175  SSDFKFLRSVSS--PDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRL 232

Query: 521  KERLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAEL 342
            KERLG EPSDEQ+A S+RI R +LQ+ L++CSLAREKLAMSNVRLVMSIAQKYD+MGAE+
Sbjct: 233  KERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEM 292

Query: 341  ADLVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLS 162
            ADLVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL++NSR+LRLP+HLHERL 
Sbjct: 293  ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLG 352

Query: 161  LIRNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            LIRNAKIRLEE G+TPS+DRIAE LNMS++KV NATEA+SK+FSLDREAFPS+
Sbjct: 353  LIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSL 405


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
            gi|550316904|gb|ERP49007.1| hypothetical protein
            POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  473 bits (1218), Expect = e-130
 Identities = 262/413 (63%), Positives = 319/413 (77%), Gaps = 9/413 (2%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSD+TEKL NV++HG+T Y+  A+ K ++I AKK+S+ 
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN- 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            +GP+FPS NR++ SI AL EH++++S  S    ++ + D                EA+LL
Sbjct: 58   YGPSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNH-------- 702
            LQKSMLEKQWNLSFER  +   + +++NK I V  SG+SAR+RR++ R KN         
Sbjct: 115  LQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQ 174

Query: 701  VSNLTVLRRKKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRL 522
             S+   LR      P+LL NRL+GYVKGVVS+E+L HTEVV LS  I+AGLS EDHKSRL
Sbjct: 175  SSDFKFLRSVSS--PDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRL 232

Query: 521  KERLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAEL 342
            KERLG EPSDEQ+A S+RI R +LQ+ L++CSLAREKLAMSNVRLVMSIAQKYD+MGAE+
Sbjct: 233  KERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEM 292

Query: 341  ADLVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLS 162
            ADLVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL++NSR+LRLP+HLHERL 
Sbjct: 293  ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLG 352

Query: 161  LIRNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            LIRNAKIRLEE G+TPS+DRIAE LNMS++KV NATEA+SK+FSLDREAFPS+
Sbjct: 353  LIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSL 405


>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
          Length = 512

 Score =  463 bits (1192), Expect = e-127
 Identities = 254/412 (61%), Positives = 308/412 (74%), Gaps = 8/412 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEH-GLTQYHQVASGKTSLIFAKKTSD 1038
            MMAT AVI           SFYYSDITEKL+++++H G    H   S   +++ A+K S+
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCH--FSSTKNVVTARKPSN 58

Query: 1037 SFGPNFPSNRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
                   SNR  QSI AL EH+ ++S PS+A + W                    EA+LL
Sbjct: 59   CSSRFPSSNRPQQSIRALKEHVHTASAPSSATQQWFQE--LNDLEEESSDLEYSVEALLL 116

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFE+K     + + ++K I V  SG+SAR+RR+++  +  ++  T + 
Sbjct: 117  LQKSMLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTLNKSTCVM 176

Query: 677  RKKQ-------IGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLK 519
                       + PELL NR++GYVKGV+SE+LLTHTEVV LS KIK GLS+E+HKSRLK
Sbjct: 177  HPSTNKPLRAIVSPELLQNRVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLK 236

Query: 518  ERLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELA 339
            ERLG EPSDEQLATS+RI R +LQ+ L+EC LAREKLAMSNVRLVMSIAQ+YD+MGAE+A
Sbjct: 237  ERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMA 296

Query: 338  DLVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSL 159
            DL+QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL L
Sbjct: 297  DLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL 356

Query: 158  IRNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            IRNAKIRLEE GITPS+DRIAE LNMSKKKV NATEA+SK+FSLDR+AFPS+
Sbjct: 357  IRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSL 408


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
            gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
            [Theobroma cacao]
          Length = 450

 Score =  462 bits (1190), Expect = e-127
 Identities = 258/410 (62%), Positives = 311/410 (75%), Gaps = 6/410 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SF YSDI EKL   +++G + +HQ +S K SLI AKK+S+ 
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYG-SSHHQTSSTK-SLIVAKKSSNC 58

Query: 1034 FGPNFPSNRHTQSINALTEHLESSSVPSTADE-FWGSPDFXXXXXXXXXXXXXXXEAILL 858
                  SNR  QSI AL EH++S+S+ STA+  F GS D                 A+LL
Sbjct: 59   SQSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQW LSFER         + +K I V  SG+SAR+RR +T+ K  + N ++++
Sbjct: 115  LQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQ 174

Query: 677  RKKQ-----IGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKER 513
               +     I PELL +RL+GYVKGVVS+ELL+H EVV LS KIKAGLSLE+H+ RLKER
Sbjct: 175  PNAKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKER 234

Query: 512  LGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADL 333
            LG EPSDEQLATS++I R EL++ L+ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE++DL
Sbjct: 235  LGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294

Query: 332  VQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIR 153
            +QGGLIGLLRGIEKFDS+KG+KISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LIR
Sbjct: 295  IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 354

Query: 152  NAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            NAKIRLEE GITP++DRIAE LNMS+KKV NATEAVSK+FSLDR+AFPS+
Sbjct: 355  NAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL 404


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  462 bits (1190), Expect = e-127
 Identities = 258/410 (62%), Positives = 311/410 (75%), Gaps = 6/410 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SF YSDI EKL   +++G + +HQ +S K SLI AKK+S+ 
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYG-SSHHQTSSTK-SLIVAKKSSNC 58

Query: 1034 FGPNFPSNRHTQSINALTEHLESSSVPSTADE-FWGSPDFXXXXXXXXXXXXXXXEAILL 858
                  SNR  QSI AL EH++S+S+ STA+  F GS D                 A+LL
Sbjct: 59   SQSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQW LSFER         + +K I V  SG+SAR+RR +T+ K  + N ++++
Sbjct: 115  LQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQ 174

Query: 677  RKKQ-----IGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKER 513
               +     I PELL +RL+GYVKGVVS+ELL+H EVV LS KIKAGLSLE+H+ RLKER
Sbjct: 175  PNAKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKER 234

Query: 512  LGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADL 333
            LG EPSDEQLATS++I R EL++ L+ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE++DL
Sbjct: 235  LGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 294

Query: 332  VQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIR 153
            +QGGLIGLLRGIEKFDS+KG+KISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LIR
Sbjct: 295  IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 354

Query: 152  NAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            NAKIRLEE GITP++DRIAE LNMS+KKV NATEAVSK+FSLDR+AFPS+
Sbjct: 355  NAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL 404


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  462 bits (1189), Expect = e-127
 Identities = 256/412 (62%), Positives = 308/412 (74%), Gaps = 8/412 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEH-GLTQYHQVASGKTSLIFAKKTSD 1038
            MMAT AVI           SFYYSDITEKL+++++H G    H   S   +++ A+K S+
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCH--FSSTKNVVTARKPSN 58

Query: 1037 SFGPNFPSNRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
                   SNR  QSI AL EH++++S PS+A + W                    EA+LL
Sbjct: 59   CSSRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQE--LNDLEEESSDLEYSVEALLL 116

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRI-STRNKNHVSNLTVL 681
            LQKSMLEKQWNLSFE+K     + + ++K I V  SG+SAR+RR+ ST+ K    +  V+
Sbjct: 117  LQKSMLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVM 176

Query: 680  RRKKQ------IGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLK 519
                       + PELL N ++GYVKGV+SE+LLTHTEVV LS KIK GLS+E+HKSRLK
Sbjct: 177  HPSTNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLK 236

Query: 518  ERLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELA 339
            ERLG EPSDEQLATS+RI R +LQ+ L+EC LAREKLAMSNVRLVMSIAQ+YD+MGAE+A
Sbjct: 237  ERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMA 296

Query: 338  DLVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSL 159
            DL+QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL L
Sbjct: 297  DLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL 356

Query: 158  IRNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            IRNAKIRLEE GITPS+DRIAE LNMSKKKV NATEA+SK+FSLDR+AFPS+
Sbjct: 357  IRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSL 408


>gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 417

 Score =  461 bits (1185), Expect = e-127
 Identities = 257/411 (62%), Positives = 307/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N ++L+
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ NRL+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TPSVDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 419

 Score =  461 bits (1185), Expect = e-127
 Identities = 257/411 (62%), Positives = 307/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N ++L+
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ NRL+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TPSVDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 443

 Score =  461 bits (1185), Expect = e-127
 Identities = 257/411 (62%), Positives = 307/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N ++L+
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ NRL+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TPSVDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
            gi|641828897|gb|KDO48033.1| hypothetical protein
            CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  461 bits (1185), Expect = e-127
 Identities = 257/411 (62%), Positives = 307/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N ++L+
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ NRL+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TPSVDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>gb|AKC88633.1| sigma factor [Melianthus villosus]
          Length = 506

 Score =  460 bits (1184), Expect = e-126
 Identities = 255/410 (62%), Positives = 306/410 (74%), Gaps = 7/410 (1%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           S YYSD  EKL   ++HG    H  A+   +++ AKK+S+  
Sbjct: 1    MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDHG----HYNATPTKTVVIAKKSSNC- 55

Query: 1031 GPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILLL 855
             P FPS NR TQSI AL EH++  S PSTA+ ++   +                EA+LLL
Sbjct: 56   SPRFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSN---DVDEQNFDIEYSVEALLLL 112

Query: 854  QKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVL-- 681
            QKSMLEKQWNLSF++     +  E++ K I V  SG+SAR+RR+S + K    N +++  
Sbjct: 113  QKSMLEKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQT 172

Query: 680  ----RRKKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKER 513
                R +  IGPEL+ NR +GYVKGVVSEELL+H EVVHLS KIK GLSLE+HK RLK+R
Sbjct: 173  SRCNRLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKR 232

Query: 512  LGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADL 333
            LG EPSDEQLATS+RI R EL++  +E  LAREKLAMSNVRLVMSIAQ+YD+MGAE++DL
Sbjct: 233  LGCEPSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 292

Query: 332  VQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIR 153
            VQGGLIGLLRGIEKFDS KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LIR
Sbjct: 293  VQGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIR 352

Query: 152  NAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            NAKIRLEE GITPS++R+AECLNMSKKK+ NATEA+SK+FSLDREAFPS+
Sbjct: 353  NAKIRLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSL 402


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  457 bits (1177), Expect = e-126
 Identities = 255/411 (62%), Positives = 306/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N +VL+
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ N L+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            L+QGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TP+VDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  456 bits (1174), Expect = e-125
 Identities = 256/411 (62%), Positives = 305/411 (74%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT AVI           SFYYSDI+EK   +++ G     QV  G T  + A K S +
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSAN-SQV--GSTKNVVAAKKSSN 57

Query: 1034 FGPNFPS-NRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            + P+FPS NR TQ I AL EH++++   STA+  W  P                 EA+LL
Sbjct: 58   YNPSFPSSNRQTQPIKALKEHVDTNFA-STAEP-WAEPP--NSIEEESSELDYSVEALLL 113

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFER        ++++K + V  SG+SAR+RR++++ K    N +V +
Sbjct: 114  LQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQ 173

Query: 677  R------KKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKE 516
            +      +  I PEL+ N L+GYVKGVVSEELLTH EVV LS KIK GLSL+DHK RLKE
Sbjct: 174  QNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKE 233

Query: 515  RLGYEPSDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELAD 336
            RLG EPS EQLA S+RI R ELQ++LMECSLAREKL MSNVRLVMSIAQ+YD+MGA++AD
Sbjct: 234  RLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMAD 293

Query: 335  LVQGGLIGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLI 156
            LVQGGLIGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERL LI
Sbjct: 294  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 353

Query: 155  RNAKIRLEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            RNAK+RLEE G+TPSVDRIAE LNMS+KKV NATEA+ K+FSLDREAFPS+
Sbjct: 354  RNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSL 404


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  451 bits (1161), Expect = e-124
 Identities = 252/405 (62%), Positives = 308/405 (76%), Gaps = 1/405 (0%)
 Frame = -1

Query: 1214 MMATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDS 1035
            MMAT + I           SFY+SD+TEKL NV++HG+  Y Q+ + K S+I AKK+S  
Sbjct: 1    MMATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHY-QITTTK-SVIVAKKSS-K 57

Query: 1034 FGPNFPSN-RHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILL 858
            +GP+FPS+ R+  S  AL E ++++S  ST   ++ + D                EA++L
Sbjct: 58   YGPSFPSSYRNPHSNKALKELIDTASASSTVATWFKTLD---DFEEESSVLDYSVEALIL 114

Query: 857  LQKSMLEKQWNLSFERKRTVVVSGEESNKNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            LQKSMLEKQWNLSFE   +     ++SNK I V  SG+SAR+RR++ + KN   +    +
Sbjct: 115  LQKSMLEKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQS----K 170

Query: 677  RKKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKERLGYEP 498
                I P+LL NRL+GYVKGVVS+E+L HTEVV LS  I+AGLSLEDHKS LKERLG EP
Sbjct: 171  FMSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEP 230

Query: 497  SDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGL 318
            SDEQLA S+RI R +LQ+ L++CSLAREKLAMSNVRLVMSIAQK D+MGAE+ADLVQ GL
Sbjct: 231  SDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGL 290

Query: 317  IGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIRNAKIR 138
            IGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+EN R+LRLP+HLHERL LIRNAKIR
Sbjct: 291  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIR 350

Query: 137  LEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            LEE G+TPS+DRIAE LNMS++KV NATEA+SK+FSLDREAFPS+
Sbjct: 351  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSL 395


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
            gi|734432890|gb|KHN46496.1| RNA polymerase sigma factor
            rpoD [Glycine soja] gi|947075123|gb|KRH23963.1|
            hypothetical protein GLYMA_12G013300 [Glycine max]
          Length = 503

 Score =  451 bits (1161), Expect = e-124
 Identities = 252/405 (62%), Positives = 308/405 (76%), Gaps = 2/405 (0%)
 Frame = -1

Query: 1211 MATTAVIXXXXXXXXXXXSFYYSDITEKLYNVHEHGLTQYHQVASGKTSLIFAKKTSDSF 1032
            MAT AVI           S++YSDI EKL    + G T Y  V +   SLI AKK+S+ +
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPT--KSLIVAKKSSN-Y 57

Query: 1031 GPNFP-SNRHTQSINALTEHLESSSVPSTADEFWGSPDFXXXXXXXXXXXXXXXEAILLL 855
             P FP SN+  QSI AL EH++ +  P+ AD ++ S +                EA+LLL
Sbjct: 58   TPTFPASNQQNQSIKALKEHVDDA--PTIADPWFQSYN-SNDLEVESSEMGYSVEALLLL 114

Query: 854  QKSMLEKQWNLSFERKRTVVVSGEESN-KNIEVARSGISARERRISTRNKNHVSNLTVLR 678
            QKSMLEKQWNLSFER+     S +    + + V  SG+SAR+RR++T+ K  +     ++
Sbjct: 115  QKSMLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQ 174

Query: 677  RKKQIGPELLHNRLQGYVKGVVSEELLTHTEVVHLSLKIKAGLSLEDHKSRLKERLGYEP 498
             K +I PELL +RL+GYVKG+VSEELL+H EVV+LS KIK GLSLE+HKSRLKE+LG EP
Sbjct: 175  LKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCEP 234

Query: 497  SDEQLATSMRIPRVELQAVLMECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGL 318
            SD+Q+ATS++I R EL+A ++ECSLAREKLAMSNVRLVMSIAQKYD++GAE+ DLVQGGL
Sbjct: 235  SDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGL 294

Query: 317  IGLLRGIEKFDSTKGFKISTYVYWWIRQGVSRALMENSRSLRLPSHLHERLSLIRNAKIR 138
            IGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR+LRLP+HLHERLSLIRNAK R
Sbjct: 295  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFR 354

Query: 137  LEENGITPSVDRIAECLNMSKKKVTNATEAVSKIFSLDREAFPSI 3
            LEE GITP++DRIA+ LNMS+KKV NATEA+SKI SLDREAFPS+
Sbjct: 355  LEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSL 399