BLASTX nr result
ID: Papaver30_contig00020508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00020508
(1102 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containi... 473 e-130
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 453 e-124
ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containi... 450 e-124
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu... 446 e-122
ref|XP_011028663.1| PREDICTED: pentatricopeptide repeat-containi... 445 e-122
ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containi... 445 e-122
ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 445 e-122
ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containi... 445 e-122
ref|XP_010087734.1| hypothetical protein L484_008930 [Morus nota... 444 e-122
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-122
ref|XP_008239688.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-122
ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prun... 442 e-121
ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containi... 440 e-120
ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containi... 439 e-120
ref|XP_012080160.1| PREDICTED: pentatricopeptide repeat-containi... 439 e-120
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3... 439 e-120
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2... 439 e-120
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1... 439 e-120
ref|XP_013589729.1| PREDICTED: pentatricopeptide repeat-containi... 438 e-120
ref|XP_013589728.1| PREDICTED: pentatricopeptide repeat-containi... 438 e-120
>ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Nelumbo nucifera]
Length = 878
Score = 473 bits (1216), Expect = e-130
Identities = 240/309 (77%), Positives = 265/309 (85%), Gaps = 5/309 (1%)
Frame = -3
Query: 914 QMTLTFSPSIPNPAITSTFLRPSNGENPYFSF-----FQLKKPSFIRITQRRLISNSIKP 750
+MTL S+ NPA +S+ LRP +G+ +F F K+ +F+ R +S
Sbjct: 8 KMTLMSFLSVSNPAFSSSILRPFHGKPRSSNFLGWGSFPTKRSNFLS-GGRSFLSGLT-- 64
Query: 749 PRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVL 570
RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF L
Sbjct: 65 -RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFAL 123
Query: 569 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 390
VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG+LGREGLLDKCAE+FDEMP H
Sbjct: 124 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLDKCAEIFDEMPTH 183
Query: 389 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEG 210
GV+RSVFSFTALINAYGRNGQY+ SLELL+RMK ERISPSILTYNT+I++C R GL+WEG
Sbjct: 184 GVARSVFSFTALINAYGRNGQYQTSLELLERMKRERISPSILTYNTVINSCARGGLEWEG 243
Query: 209 LLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVE 30
LLGLFA+MRH+GIQPDLVTYNTLL AC SR LGD+AEM+FR MNEAGIVPDI T+ YLVE
Sbjct: 244 LLGLFAEMRHEGIQPDLVTYNTLLCACGSRGLGDEAEMIFRTMNEAGIVPDINTYTYLVE 303
Query: 29 TFGKLEKLE 3
TFGKLEKLE
Sbjct: 304 TFGKLEKLE 312
Score = 99.4 bits (246), Expect = 5e-18
Identities = 61/223 (27%), Positives = 106/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y+Y VET KL L ++ + ++ N + + ++ + +A G + ++ +F+ M
Sbjct: 298 YTYLVETF-GKLEKLEKVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAMGVFRQM 356
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 357 Q-SAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDASTYNILIQVFGEGGY 415
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
++ + L + M E + P++ TY +I AC + GL E + M G+ P Y
Sbjct: 416 FREVVTLFNDMVEENVEPNMETYEGLIFACGKGGLH-EDAKRILLHMNEKGVVPSSKAYT 474
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++A + F M+E G P + T+ L+ TF +
Sbjct: 475 GVVEAYGQAALYEEALVAFNTMHEVGSKPTVETYNSLLHTFAR 517
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 453 bits (1165), Expect = e-124
Identities = 232/307 (75%), Positives = 261/307 (85%), Gaps = 6/307 (1%)
Frame = -3
Query: 905 LTFSPSIPNPAITS-TFLRPSNGE---NPYFS--FFQLKKPSFIRITQRRLISNSIKPPR 744
+ SPS+ + TS T LRPS+ NP + F K F +R+++++ + R
Sbjct: 1 MNLSPSLLISSSTSATLLRPSHVNLRPNPNLNRHLFPAKATDFFGY--QRILASAARI-R 57
Query: 743 AKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVF 564
AKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LVF
Sbjct: 58 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 117
Query: 563 KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGV 384
KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG+LGREGLL+KC E+FDEMP+HGV
Sbjct: 118 KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGV 177
Query: 383 SRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLL 204
+ SVFSFTALINAYGRNGQYK SLELLDRMK ER+SPSILTYNT+I++C R GLDWE LL
Sbjct: 178 APSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELL 237
Query: 203 GLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETF 24
GLFAQMRH+GIQ D+VTYNTLL ACA R LGD+AEMVFR MNE GI+PDITT++YLVETF
Sbjct: 238 GLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETF 297
Query: 23 GKLEKLE 3
GKL +LE
Sbjct: 298 GKLNRLE 304
Score = 101 bits (252), Expect = 1e-18
Identities = 64/223 (28%), Positives = 107/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VET KL+ L + + ++ + + + ++ + AQ G + ++ +F+ M
Sbjct: 290 YSYLVETF-GKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D ++F EM + ++ LIN +G G
Sbjct: 349 QGA-GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 407
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E + P++ TY +I AC + GL E + M G+ P Y
Sbjct: 408 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH-EDAKKILLHMNEKGVVPSSKAYT 466
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++A + F MNE G P + T+ L++ F K
Sbjct: 467 GVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAK 509
Score = 73.2 bits (178), Expect = 4e-10
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K +E+ PS V +S+ LIN S LD K + S+ +
Sbjct: 164 KCQEIFDEMPSHGVAPSVFSFTA--LINAYGRNGQYKSSLELLDRMKKERVSPSILTYNT 221
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G DW+ L LF M+ + + + Y ++ R GL D+ VF M
Sbjct: 222 VINSCARGGLDWEELLGLFAQMRHE-GIQADIVTYNTLLSACARRGLGDEAEMVFRTMNE 280
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + +++ L+ +G+ + + ELL M+S P I +YN ++ A + G E
Sbjct: 281 GGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKE 340
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M + P+ T+ L+
Sbjct: 341 A-MGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILI 399
Query: 32 ETFGK 18
FG+
Sbjct: 400 NVFGE 404
Score = 59.7 bits (143), Expect = 4e-06
Identities = 46/214 (21%), Positives = 96/214 (44%)
Frame = -3
Query: 695 KGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLF 516
KG + E ++ K+ + +AR D F V + F Q G ++ +++ +
Sbjct: 509 KGGLYKESEAILLKMG----QSGVARNRDTFNG---------VIEAFRQGGQFEEAIKAY 555
Query: 515 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 336
M++ C P+E ++ + GL+++ E F E+ A G+ SV + ++ Y +
Sbjct: 556 VEMEKAR-CDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 614
Query: 335 NGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLV 156
++ + +LLD M + R+S +I +W+ + +F +++ +G +
Sbjct: 615 ADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVR 674
Query: 155 TYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
YNTLL A ++A V + G+ P++
Sbjct: 675 FYNTLLEALWWLGQKERATRVLNEATKRGLFPEL 708
>ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Eucalyptus grandis]
gi|629082906|gb|KCW49351.1| hypothetical protein
EUGRSUZ_K02896 [Eucalyptus grandis]
Length = 861
Score = 450 bits (1158), Expect = e-124
Identities = 229/303 (75%), Positives = 255/303 (84%), Gaps = 2/303 (0%)
Frame = -3
Query: 905 LTFSPSIPNPAITSTFLRPSNG--ENPYFSFFQLKKPSFIRITQRRLISNSIKPPRAKPK 732
+TFS S+P P+ LR S ++P F SF +R I RAKPK
Sbjct: 1 MTFSLSLPLPSPKPRGLRSSKEILQSPIRRRFLAGDLSFAAGGRRCCSGAGIV--RAKPK 58
Query: 731 ELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFA 552
EL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LVFKEFA
Sbjct: 59 ELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDMFKNKLSLNDFALVFKEFA 118
Query: 551 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSV 372
QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC E+FDEMP++GVSRSV
Sbjct: 119 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCREIFDEMPSNGVSRSV 178
Query: 371 FSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFA 192
FS+TALINAYGRNGQY+VSLE L +MK ER+SPSILTYNT+I+AC R GLDWEGLL LFA
Sbjct: 179 FSYTALINAYGRNGQYEVSLEFLHQMKKERVSPSILTYNTVINACARGGLDWEGLLDLFA 238
Query: 191 QMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLE 12
+MRH+GIQPDLVTYNTLL AC++R LGD+AEMVFR MNE G++PDITT++YLVETFGKL
Sbjct: 239 EMRHEGIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNEGGVIPDITTYSYLVETFGKLG 298
Query: 11 KLE 3
KLE
Sbjct: 299 KLE 301
Score = 106 bits (265), Expect = 3e-20
Identities = 66/223 (29%), Positives = 107/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 287 YSYLVETF-GKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKESMDVFRQM 345
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ G+ G D E+F EM ++ LI +G G
Sbjct: 346 QAA-GCAPNAATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 404
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L + M E + P++ TY +I+AC R GL +E + M GI P Y
Sbjct: 405 FKEVVTLFNDMVEENVEPNMETYEGLIYACGRGGL-YEDSKKILLHMNERGILPSSKVYT 463
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A +L ++A + F MNE G P + T+ L+ TF K
Sbjct: 464 GVIEAYGQASLYEEALVAFNTMNEVGSKPTVETYNSLIHTFAK 506
Score = 81.6 bits (200), Expect = 1e-12
Identities = 48/195 (24%), Positives = 95/195 (48%)
Frame = -3
Query: 587 LNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVF 408
+ + + + F + G ++ L K M+ P+ Y +++ + G + + +VF
Sbjct: 284 ITTYSYLVETFGKLGKLEKVSELLKEMESG-GNLPDITSYNVLLEAYAQSGSIKESMDVF 342
Query: 407 DEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRV 228
+M A G + + +++ L+N YG++G+Y EL MK P TYN +I
Sbjct: 343 RQMQAAGCAPNAATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEG 402
Query: 227 GLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITT 48
G ++ ++ LF M + ++P++ TY L+ AC L + ++ + MNE GI+P
Sbjct: 403 GY-FKEVVTLFNDMVEENVEPNMETYEGLIYACGRGGLYEDSKKILLHMNERGILPSSKV 461
Query: 47 HAYLVETFGKLEKLE 3
+ ++E +G+ E
Sbjct: 462 YTGVIEAYGQASLYE 476
Score = 76.3 bits (186), Expect = 4e-11
Identities = 49/175 (28%), Positives = 82/175 (46%)
Frame = -3
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLDLFAEMRHE-GIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNEGGVIPDITTY 287
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
+ L+ +G+ G+ + ELL M+S P I +YN ++ A + G E + +F QM+
Sbjct: 288 SYLVETFGKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKES-MDVFRQMQ 346
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
G P+ TY+ LL D +F M + PD T+ L++ FG+
Sbjct: 347 AAGCAPNAATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGE 401
Score = 61.6 bits (148), Expect = 1e-06
Identities = 38/159 (23%), Positives = 76/159 (47%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ +YT +I G+ L ++ F+ M G +V ++ +LI+ + + G YK + +
Sbjct: 457 PSSKVYTGVIEAYGQASLYEEALVAFNTMNEVGSKPTVETYNSLIHTFAKGGLYKEAEVI 516
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L RM ++ + ++N +I A R G +E + + M PD T +L
Sbjct: 517 LTRMGDSGVARNRDSFNGMIEA-FRQGGQFEEAIKTYVDMDKVRCNPDERTLEAVLSVYR 575
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEK 9
L D++E F+ + +GI+P + + +V + K ++
Sbjct: 576 FAGLVDESEEQFKEIKSSGILPSVMCYCMMVAVYAKCDR 614
>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
gi|550322283|gb|EEF06266.2| hypothetical protein
POPTR_0015s08030g [Populus trichocarpa]
Length = 866
Score = 446 bits (1148), Expect = e-122
Identities = 226/307 (73%), Positives = 261/307 (85%), Gaps = 4/307 (1%)
Frame = -3
Query: 911 MTLTFSPSIPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRI----TQRRLISNSIKPPR 744
MTL+ S SIP+P+ ST S P+ PS R+ + R+ S + K R
Sbjct: 1 MTLSPSLSIPSPSPISTKSIKSKHTFPFPIL-----PSHRRLVSFSSDRKAYSGAWKA-R 54
Query: 743 AKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVF 564
AKPKEL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LVF
Sbjct: 55 AKPKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 114
Query: 563 KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGV 384
KEFAQRGDWQRSLRLFK+MQRQIWCKPNEHIYTIMI LLGREGLL+KC+++F+EM AHGV
Sbjct: 115 KEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGV 174
Query: 383 SRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLL 204
SRSVFS+TALIN+YGRNG+Y+VSLELL+RMK ER+SPSILTYNT+I++C R GLDWEGLL
Sbjct: 175 SRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLL 234
Query: 203 GLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETF 24
GLFA+MRH+GIQPD+VTYNTLL AC++R LGD+AEMVFR MNE G+VPDITT+ YLV+TF
Sbjct: 235 GLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTF 294
Query: 23 GKLEKLE 3
GKL +L+
Sbjct: 295 GKLNRLD 301
Score = 94.4 bits (233), Expect = 2e-16
Identities = 59/223 (26%), Positives = 108/223 (48%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y+Y V+T KL+ L + + + N ++ + ++ + +A+ G+ + + +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q + C PN Y+I++GL G+ G D+ E+F EM ++ LI+ +G G
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E + P++ TY +I AC + GL + + M G+ P Y
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLH-DDAKKILLHMSEKGMIPSSKAYT 463
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A A+ ++A + MNE G P I T+ L+ F +
Sbjct: 464 GVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFAR 506
Score = 79.3 bits (194), Expect = 5e-12
Identities = 51/175 (29%), Positives = 83/175 (47%)
Frame = -3
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
T L++ +G+ + ELL M S P I +YN ++ A R+G + E G+F M+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG-NIEDATGVFRLMQ 346
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
G P+ TY+ LLG D+ +F M + PD T+ L++ FG+
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGE 401
Score = 77.4 bits (189), Expect = 2e-11
Identities = 43/161 (26%), Positives = 77/161 (47%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P Y +++ R G ++ VF M G + +++ L+ YG++G+Y EL
Sbjct: 317 PEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVREL 376
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
MK P TYNT+I G ++ ++ LF M + ++P++ TY L+ AC
Sbjct: 377 FLEMKVSNTEPDAATYNTLIDVFGEGGY-FKEVVTLFHDMAEENVEPNMETYEGLIFACG 435
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L D A+ + M+E G++P + ++E +G+ E
Sbjct: 436 KGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYE 476
Score = 62.8 bits (151), Expect = 5e-07
Identities = 68/323 (21%), Positives = 124/323 (38%), Gaps = 43/323 (13%)
Frame = -3
Query: 848 SNGENPYFSFFQLKKPSFIRITQR-------RLISNSIKPPRAKPKELILGNPSVTVEKG 690
S G P S + + ++ RI RL+ + P A+ ++LG + + G
Sbjct: 312 STGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLG---LYGKHG 368
Query: 689 KYSYDVETLIN-KLSSLPPRGSIARCL-DVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLF 516
+Y E + K+S+ P + L DVF + V +F + A+
Sbjct: 369 RYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEEN--------- 419
Query: 515 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 336
+PN Y +I G+ GL D ++ M G+ S ++T +I AYG+
Sbjct: 420 --------VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQ 471
Query: 335 NGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGL---------------------- 222
Y+ +L L+ M P+I TYNT+I+ R GL
Sbjct: 472 AAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDS 531
Query: 221 ------------DWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMN 78
+E + + +M + PD T +L L D++ F+ +
Sbjct: 532 FNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIK 591
Query: 77 EAGIVPDITTHAYLVETFGKLEK 9
+GI+P++ + ++ + K ++
Sbjct: 592 ASGILPNVMCYCMMLAVYAKSDR 614
>ref|XP_011028663.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Populus euphratica]
Length = 866
Score = 445 bits (1145), Expect = e-122
Identities = 220/303 (72%), Positives = 257/303 (84%)
Frame = -3
Query: 911 MTLTFSPSIPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRITQRRLISNSIKPPRAKPK 732
MTL+ S SIP+P+ ST + S P+ ++ + + R + RAKPK
Sbjct: 1 MTLSPSLSIPSPSPISTKIIKSKHTFPFPILPSHRR--LVSFSSDRKAYSGAGRARAKPK 58
Query: 731 ELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFA 552
EL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LVFKEFA
Sbjct: 59 ELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFA 118
Query: 551 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSV 372
QRGDWQRSLRLFK+MQRQIWCKPNEHIYTIMI LLGREGLL+KC+++F+EM AHGVSRSV
Sbjct: 119 QRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSV 178
Query: 371 FSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFA 192
FS+TALIN+YGRNG+Y+VSLE L+RMK ER+SPSILTYNT+I++C R GLDWEGLLGLFA
Sbjct: 179 FSYTALINSYGRNGKYEVSLEFLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFA 238
Query: 191 QMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLE 12
+MRH+GIQPD+VTYNTLL AC++R LGD+AEMVFR MNE G+VPDITT+ YLV+TFGKL
Sbjct: 239 EMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLN 298
Query: 11 KLE 3
+L+
Sbjct: 299 RLD 301
Score = 89.4 bits (220), Expect = 5e-15
Identities = 58/223 (26%), Positives = 107/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y+Y V+T KL+ L + + + N ++ + ++ + +A+ G+ + + +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q + C PN Y+I++GL G+ D+ E+F EM ++ LI+ +G G
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHERYDEVRELFLEMKVSDTEPDAATYNTLIDVFGEGGY 404
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
YK + L M E + P++ TY +I AC + GL + + M G+ P
Sbjct: 405 YKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLH-DDAKKILLHMSEKGMIPSSKACT 463
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A A+ ++A ++ MNE G P I T+ L+ F +
Sbjct: 464 GVIEAYGQAAMYEEALVMLNTMNEMGSKPTIETYNTLIYMFAR 506
Score = 78.6 bits (192), Expect = 9e-12
Identities = 51/175 (29%), Positives = 83/175 (47%)
Frame = -3
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
T L++ +G+ + ELL M S P I +YN ++ A R+G + E G+F M+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG-NIEDATGVFRLMQ 346
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
G P+ TY+ LLG D+ +F M + PD T+ L++ FG+
Sbjct: 347 EAGCVPNAETYSILLGLYGKHERYDEVRELFLEMKVSDTEPDAATYNTLIDVFGE 401
Score = 72.0 bits (175), Expect = 8e-10
Identities = 42/161 (26%), Positives = 75/161 (46%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P Y +++ R G ++ VF M G + +++ L+ YG++ +Y EL
Sbjct: 317 PEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHERYDEVREL 376
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
MK P TYNT+I G ++ ++ LF M + ++P++ TY L+ AC
Sbjct: 377 FLEMKVSDTEPDAATYNTLIDVFGEGGY-YKEVVTLFHDMAEENVEPNMETYEGLIFACG 435
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L D A+ + M+E G++P ++E +G+ E
Sbjct: 436 KGGLHDDAKKILLHMSEKGMIPSSKACTGVIEAYGQAAMYE 476
Score = 61.2 bits (147), Expect = 1e-06
Identities = 44/170 (25%), Positives = 81/170 (47%)
Frame = -3
Query: 557 FAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSR 378
F + G ++ + LF M + +PN Y +I G+ GL D ++ M G+
Sbjct: 399 FGEGGYYKEVVTLFHDMAEEN-VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIP 457
Query: 377 SVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGL 198
S + T +I AYG+ Y+ +L +L+ M P+I TYNT+I+ R GL ++ +
Sbjct: 458 SSKACTGVIEAYGQAAMYEEALVMLNTMNEMGSKPTIETYNTLIYMFARGGL-YKETEAI 516
Query: 197 FAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITT 48
+M G+ D ++N ++ ++A + M ++ ++PD T
Sbjct: 517 LLKMGDFGVARDRDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLIPDERT 566
>ref|XP_009369399.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Pyrus x bretschneideri]
Length = 876
Score = 445 bits (1145), Expect = e-122
Identities = 214/248 (86%), Positives = 230/248 (92%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 63 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 122
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 123 FKEFASRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 182
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++SPSILTYN +++AC R GLDWEGL
Sbjct: 183 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVSPSILTYNIVLNACARGGLDWEGL 242
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPDITT+ YLVE
Sbjct: 243 LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVEA 302
Query: 26 FGKLEKLE 3
FGKL+KLE
Sbjct: 303 FGKLDKLE 310
Score = 100 bits (248), Expect = 3e-18
Identities = 64/223 (28%), Positives = 103/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y Y VE KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 296 YRYLVEAF-GKLDKLERVSELLKEMEAGGNLTDITSYNVLLEAYAQLGSIRESMGVFRQM 354
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L G G D E+F EM ++ LI +G G
Sbjct: 355 QAA-GCMPNAATYSILLNLYGSHGRYDDVRELFLEMKVSNTVPDAATYNILIQVFGAGGY 413
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E+I P++ TY +I+AC + GL E + M GI P Y
Sbjct: 414 FKEVVTLFHDMVEEKIEPNMETYEGLIYACGKGGLH-EDSKKILLHMHEKGIVPSTQAYT 472
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL D+A + F MNE G P + ++ L+ F +
Sbjct: 473 GVIEAYGQAALYDEALVAFNIMNEVGSKPSVESYNSLIHAFAR 515
Score = 77.4 bits (189), Expect = 2e-11
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 4/235 (1%)
Frame = -3
Query: 713 PSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVLVFKEFAQRG 543
PS V + +SY LIN + LD K S+ + +V A+ G
Sbjct: 179 PSQGVVRSVFSYTA--LINAYGRNGQYETSLEFLDRMKKDKVSPSILTYNIVLNACARGG 236
Query: 542 -DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFS 366
DW+ L LF M+ + +P+ Y ++ GL D+ VF M G+ + +
Sbjct: 237 LDWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITT 295
Query: 365 FTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQM 186
+ L+ A+G+ + + ELL M++ I +YN ++ A ++G E +G+F QM
Sbjct: 296 YRYLVEAFGKLDKLERVSELLKEMEAGGNLTDITSYNVLLEAYAQLGSIRES-MGVFRQM 354
Query: 185 RHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFG 21
+ G P+ TY+ LL S D +F M + VPD T+ L++ FG
Sbjct: 355 QAAGCMPNAATYSILLNLYGSHGRYDDVRELFLEMKVSNTVPDAATYNILIQVFG 409
Score = 59.7 bits (143), Expect = 4e-06
Identities = 39/172 (22%), Positives = 83/172 (48%)
Frame = -3
Query: 569 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 390
+ + F Q G ++ +++ + M++ C+P+E ++ + GL+++C E F E+ A
Sbjct: 544 MIEAFRQGGQFEEAIKAYVEMEKTR-CEPDEWTLEAVLSVYCVAGLVNECEEHFQEIKAS 602
Query: 389 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEG 210
G+ SV + ++ Y R+ ++ + ELL+ M + R S +I +W+
Sbjct: 603 GILPSVMCYCMMLAVYARSDRWDDAYELLNEMLTNRQSNIHQVIGQMIKGDYDDDSNWQM 662
Query: 209 LLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
+ +F +++ +G + YNTLL A +A V + G+ P++
Sbjct: 663 VEYVFDKLKSEGCWLVMRFYNTLLEALWWLGQKQRAVRVLNEATQRGLFPEL 714
>ref|XP_008367545.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74850, chloroplastic-like, partial [Malus
domestica]
Length = 389
Score = 445 bits (1144), Expect = e-122
Identities = 213/248 (85%), Positives = 231/248 (93%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
RAKPK+LILGNPSVT+EKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 67 RAKPKDLILGNPSVTLEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 126
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 127 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 186
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++ PSILTYNT+++AC R GLDWEGL
Sbjct: 187 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVPPSILTYNTVLNACARGGLDWEGL 246
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPD+TT+ YLVET
Sbjct: 247 LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDMTTYRYLVET 306
Query: 26 FGKLEKLE 3
FGKL+KLE
Sbjct: 307 FGKLDKLE 314
Score = 58.5 bits (140), Expect = 9e-06
Identities = 38/135 (28%), Positives = 65/135 (48%)
Frame = -3
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
DW+ L LF M+ + +P+ Y ++ GL D+ VF M G+ + ++
Sbjct: 242 DWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDMTTY 300
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
L+ +G+ + + ELL M++ P I +YN ++ A G E +G+F QM+
Sbjct: 301 RYLVETFGKLDKLEKVSELLKEMEAGGNLPEITSYNVLLEAYAEXGSIRES-MGVFRQMQ 359
Query: 182 HDGIQPDLVTYNTLL 138
G P+ TY+ LL
Sbjct: 360 AXGCMPNAATYSILL 374
>ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Malus domestica]
Length = 1062
Score = 445 bits (1144), Expect = e-122
Identities = 213/248 (85%), Positives = 231/248 (93%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
RAKPK+LILGNPSVT+EKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 249 RAKPKDLILGNPSVTLEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 308
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKCAEVFDEMP+ G
Sbjct: 309 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQG 368
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
V RSVFS+TALINAYGRNGQY+ SLE LDRMK +++ PSILTYNT+++AC R GLDWEGL
Sbjct: 369 VVRSVFSYTALINAYGRNGQYETSLEFLDRMKKDKVPPSILTYNTVLNACARGGLDWEGL 428
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPD+TT+ YLVET
Sbjct: 429 LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDMTTYRYLVET 488
Query: 26 FGKLEKLE 3
FGKL+KLE
Sbjct: 489 FGKLDKLE 496
Score = 108 bits (271), Expect = 6e-21
Identities = 66/223 (29%), Positives = 107/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y Y VET KL L + + ++ N + + ++ + +A+ G + S+ +F+ M
Sbjct: 482 YRYLVETF-GKLDKLEKVSELLKEMEAGGNLPEITSYNVLLEAYAELGSIRESMGVFRQM 540
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 541 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 599
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E+I P++ TY +I+AC + GL E + M +GI P Y
Sbjct: 600 FKEVVTLFHDMVEEKIEPNMETYEGLIYACGKGGLH-EDSKKILLHMHENGIVPSTKAYT 658
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ AC AL D+A + F MNE G P + ++ L+ F +
Sbjct: 659 GVIEACGQAALYDEALVAFNTMNEVGSKPSVESYNSLIYAFAR 701
Score = 73.2 bits (178), Expect = 4e-10
Identities = 47/175 (26%), Positives = 81/175 (46%)
Frame = -3
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
DW+ L LF M+ + +P+ Y ++ GL D+ VF M G+ + ++
Sbjct: 424 DWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDMTTY 482
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
L+ +G+ + + ELL M++ P I +YN ++ A +G E +G+F QM+
Sbjct: 483 RYLVETFGKLDKLEKVSELLKEMEAGGNLPEITSYNVLLEAYAELGSIRES-MGVFRQMQ 541
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
G P+ TY+ LL D +F M + PD T+ L++ FG+
Sbjct: 542 AAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGE 596
Score = 58.5 bits (140), Expect = 9e-06
Identities = 38/172 (22%), Positives = 81/172 (47%)
Frame = -3
Query: 569 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 390
+ + F Q G ++ +++ + M++ C P+E ++ + GL+++C E F E+ A
Sbjct: 730 MIEAFRQGGQFEEAIKAYVEMEKTR-CDPDEWTLEAVLSVYCVAGLVNECEEHFQEIKAS 788
Query: 389 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEG 210
G+ SV + ++ Y R+ ++ + LL+ M + R S +I +W+
Sbjct: 789 GILPSVMCYCMMLAVYARSNRWDDAYVLLNEMLTNRASNIHQVIGQMIKGDYDDDSNWQM 848
Query: 209 LLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
+ +F +++ +G + YNTLL A +A V + G+ P++
Sbjct: 849 VEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKQRAARVLNEATQRGLFPEL 900
>ref|XP_010087734.1| hypothetical protein L484_008930 [Morus notabilis]
gi|587839092|gb|EXB29767.1| hypothetical protein
L484_008930 [Morus notabilis]
Length = 905
Score = 444 bits (1143), Expect = e-122
Identities = 214/248 (86%), Positives = 234/248 (94%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
RAKPKE+ILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 69 RAKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 128
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDK AE+FDEMP+ G
Sbjct: 129 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEIFDEMPSQG 188
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
V RSVFS+TALINAYGRNGQY+ SL+LLDRMK +++SP+ILTYNT+I+AC R GLDWEGL
Sbjct: 189 VVRSVFSYTALINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNTVINACARGGLDWEGL 248
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPDLVTYNTLLGACA+R LGD+AEMVFR MNE GIVPDITT++ LVET
Sbjct: 249 LGLFAEMRHEGIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNEGGIVPDITTYSCLVET 308
Query: 26 FGKLEKLE 3
FGKL KLE
Sbjct: 309 FGKLGKLE 316
Score = 96.3 bits (238), Expect = 4e-17
Identities = 60/223 (26%), Positives = 105/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YS VET KL L + + ++ N + + ++ + +A+ G ++ +F+ M
Sbjct: 302 YSCLVETF-GKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQM 360
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN + Y+I++ L G++G + E+F EM ++ LI +G G
Sbjct: 361 QTA-GCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 419
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E + P++ TY +I AC + GL + + + M GI P Y
Sbjct: 420 FKEVVTLFHDMVEENVEPNMETYEGLIIACGKGGLHGDAKI-ILNHMNEKGIVPSSKVYT 478
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++A + F MNE G P + T+ L+ F +
Sbjct: 479 GVIEAYGQAALYEEALVAFNTMNEVGSRPSVETYNSLIHAFSR 521
Score = 82.0 bits (201), Expect = 8e-13
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD-VFKNKLSLN--DFVL 570
K E+ PS V + +SY LIN + + LD + K+K+S N +
Sbjct: 176 KSAEIFDEMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNT 233
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G DW+ L LF M+ + +P+ Y ++G GL D+ VF M
Sbjct: 234 VINACARGGLDWEGLLGLFAEMRHE-GIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNE 292
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + +++ L+ +G+ G+ + ELL M+S P I +YN ++ A G E
Sbjct: 293 GGIVPDITTYSCLVETFGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISE 352
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL + + +F M + PD T+ L+
Sbjct: 353 A-VGVFRQMQTAGCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILI 411
Query: 32 ETFGK 18
+ FG+
Sbjct: 412 QVFGE 416
Score = 68.6 bits (166), Expect = 9e-09
Identities = 40/161 (24%), Positives = 80/161 (49%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ +YT +I G+ L ++ F+ M G SV ++ +LI+A+ R G YK + +
Sbjct: 472 PSSKVYTGVIEAYGQAALYEEALVAFNTMNEVGSRPSVETYNSLIHAFSRGGLYKEAEAI 531
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L RM + ++ ++ +N++I A R G E + + +M PD T LL
Sbjct: 532 LQRMGNSAVARNVDLFNSLIEA-FRQGGQIEEAVKAYIEMGKSRCDPDERTLEALLSVYC 590
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L D+ E F+ + +GI+P + + ++ + + ++++
Sbjct: 591 FAGLVDECEEHFKEIKASGILPSVMCYCTMLAVYARCDRID 631
>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 862
Score = 444 bits (1143), Expect = e-122
Identities = 222/303 (73%), Positives = 255/303 (84%)
Frame = -3
Query: 911 MTLTFSPSIPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRITQRRLISNSIKPPRAKPK 732
MTL+ + SI P+ S + N + + SF + + + +S S+ RAKPK
Sbjct: 1 MTLSPTLSISRPSPLSAPIPKLNPKPHHLSFLSGHR----KFIHGQRLSFSV---RAKPK 53
Query: 731 ELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFA 552
+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LVFKEFA
Sbjct: 54 DLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFA 113
Query: 551 QRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSV 372
RGDWQRSLRLFKYMQRQIWCKP+EHIYTIMI LLGREGLLDKCAE+FDEMP GV RSV
Sbjct: 114 ARGDWQRSLRLFKYMQRQIWCKPSEHIYTIMISLLGREGLLDKCAEIFDEMPTQGVIRSV 173
Query: 371 FSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFA 192
FS+TALINAYGRNGQ+++SL+LLDRMK +++SP+ILTYNT+++AC R GLDWEGLLGLFA
Sbjct: 174 FSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGLDWEGLLGLFA 233
Query: 191 QMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLE 12
+MRH+G+QPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPDITT++YLVETFGKL
Sbjct: 234 EMRHEGVQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYSYLVETFGKLN 293
Query: 11 KLE 3
LE
Sbjct: 294 NLE 296
Score = 99.8 bits (247), Expect = 4e-18
Identities = 63/223 (28%), Positives = 105/223 (47%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VET KL++L + + ++ N + + ++ + +AQ G + ++ +F+ M
Sbjct: 282 YSYLVETF-GKLNNLEKVSELLKGMESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQM 340
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q + C N Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 341 Q-EAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVSNAEPDAATYNILIQVFGEGGY 399
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
++ + L M E I P++ TY +I+AC + GL E + M GI P Y
Sbjct: 400 FREVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMNEKGIVPSSKAYT 458
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
+ A AL D+A + F MNE G P + + L+ + +
Sbjct: 459 GAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIHAYAR 501
Score = 67.4 bits (163), Expect = 2e-08
Identities = 44/159 (27%), Positives = 76/159 (47%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ YT I G+ L D+ F+ M G S SV SF +LI+AY R G YK + ++
Sbjct: 452 PSSKAYTGAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIHAYARGGLYKETEQV 511
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L M I+ + ++N +I A R G +E + + +M PD T +L +
Sbjct: 512 LSIMGEFGIAINASSFNGMIEA-FRQGGQFEEAIKTYVEMEKRRCDPDECTLEAVLSVYS 570
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEK 9
L ++ E F + +GI+P + + ++ + K ++
Sbjct: 571 VAGLVNECEEHFEEIKASGILPSVMCYCMMLAVYAKTDR 609
Score = 60.1 bits (144), Expect = 3e-06
Identities = 39/187 (20%), Positives = 90/187 (48%)
Frame = -3
Query: 593 LSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAE 414
++ + F + + F Q G ++ +++ + M+++ C P+E ++ + GL+++C E
Sbjct: 522 INASSFNGMIEAFRQGGQFEEAIKTYVEMEKRR-CDPDECTLEAVLSVYSVAGLVNECEE 580
Query: 413 VFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACV 234
F+E+ A G+ SV + ++ Y + ++ + +LL+ M + R+S +I
Sbjct: 581 HFEEIKASGILPSVMCYCMMLAVYAKTDRWDDANKLLNEMLTNRVSNIHQVMGQMIKGDY 640
Query: 233 RVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
+W+ + +F +++ +G + YNTL+ A +A V + G+ P++
Sbjct: 641 DDESNWQMVEYVFDKLKSEGCGLGMRFYNTLIEALWWLGQKQRAVRVLSEATQRGLFPEL 700
Query: 53 TTHAYLV 33
LV
Sbjct: 701 LRKNKLV 707
>ref|XP_008239688.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Prunus mume]
Length = 876
Score = 444 bits (1142), Expect = e-122
Identities = 212/248 (85%), Positives = 232/248 (93%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 63 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 122
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC+EVFD+MP+ G
Sbjct: 123 FKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMPSQG 182
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
V RSVFS+TALINAYGRNGQY+ SL+ LDRMK +++SPSILTYNT+++AC R GL+WEGL
Sbjct: 183 VVRSVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEWEGL 242
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPDITT+ YLVET
Sbjct: 243 LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVET 302
Query: 26 FGKLEKLE 3
FGKL+KLE
Sbjct: 303 FGKLDKLE 310
Score = 102 bits (255), Expect = 4e-19
Identities = 66/223 (29%), Positives = 104/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y Y VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 296 YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 354
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 355 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKMSNTEPDPATYNILIQVFGEGGY 413
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P++ TY +I+AC + GL E + M GI P Y
Sbjct: 414 FKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMSEKGIVPSSKAYT 472
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL D+A + F MNE G P + ++ L+ F +
Sbjct: 473 GVIEAYGQAALYDEALVAFNTMNEVGSKPSVESYNSLIYAFAR 515
Score = 73.9 bits (180), Expect = 2e-10
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K E+ PS V + +SY LIN + + LD K S+ +
Sbjct: 170 KCSEVFDDMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNT 227
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G +W+ L LF M+ + +P+ Y ++ GL D+ VF M
Sbjct: 228 VLNACARGGLEWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNE 286
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + ++ L+ +G+ + + ELL M+S P I +YN ++ A ++G E
Sbjct: 287 GGIVPDITTYRYLVETFGKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRE 346
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M + PD T+ L+
Sbjct: 347 S-MGVFRQMQAAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKMSNTEPDPATYNILI 405
Query: 32 ETFGK 18
+ FG+
Sbjct: 406 QVFGE 410
Score = 60.5 bits (145), Expect = 2e-06
Identities = 40/175 (22%), Positives = 82/175 (46%)
Frame = -3
Query: 578 FVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEM 399
F + F Q G ++ +++ + M+++ C +E ++ + GL+++C + F EM
Sbjct: 541 FXXXIEAFRQGGQFEEAIKAYVEMEKRR-CDHDEWTLEAVLSVYCVSGLVNECEDHFQEM 599
Query: 398 PAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLD 219
A G+ SV + ++ Y RN ++ + ELL+ M + R S +I +
Sbjct: 600 KASGILPSVMCYCMMLAVYARNDRWDDANELLNEMLTNRASNIHQVIGQMIKGDYDDDSN 659
Query: 218 WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
W+ + +F +++ +G + YNTLL A +A V + G+ P++
Sbjct: 660 WQMVEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKQRAVRVLNEATQRGLFPEL 714
>ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
gi|462406104|gb|EMJ11568.1| hypothetical protein
PRUPE_ppa001337mg [Prunus persica]
Length = 850
Score = 442 bits (1138), Expect = e-121
Identities = 211/251 (84%), Positives = 232/251 (92%)
Frame = -3
Query: 755 KPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF 576
K P + PK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF
Sbjct: 34 KTPDSSPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDF 93
Query: 575 VLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMP 396
LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC+EVFD+MP
Sbjct: 94 ALVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMP 153
Query: 395 AHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDW 216
+ GV RSVFS+TALINAYGRNGQY+ SL+ LDRMK +++SPSILTYNT+++AC R GL+W
Sbjct: 154 SQGVVRSVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEW 213
Query: 215 EGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYL 36
EGLLGLFA+MRH+GIQPDLVTYNTLL ACA R LGD+AEMVFR MNE GIVPDITT+ YL
Sbjct: 214 EGLLGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYL 273
Query: 35 VETFGKLEKLE 3
VETFGKL+KLE
Sbjct: 274 VETFGKLDKLE 284
Score = 102 bits (255), Expect = 4e-19
Identities = 66/223 (29%), Positives = 104/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
Y Y VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 270 YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 328
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 329 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQVFGEGGY 387
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P++ TY +I+AC + GL E + M GI P Y
Sbjct: 388 FKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMSEKGIVPSSKAYT 446
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL D+A + F MNE G P + ++ L+ F +
Sbjct: 447 GVIEAYGQAALYDEALVAFNTMNEVGSKPSVESYNSLIYAFAR 489
Score = 73.6 bits (179), Expect = 3e-10
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K E+ PS V + +SY LIN + + LD K S+ +
Sbjct: 144 KCSEVFDDMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNT 201
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G +W+ L LF M+ + +P+ Y ++ GL D+ VF M
Sbjct: 202 VLNACARGGLEWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNE 260
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + ++ L+ +G+ + + ELL M+S P I +YN ++ A ++G E
Sbjct: 261 GGIVPDITTYRYLVETFGKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRE 320
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M + PD T+ L+
Sbjct: 321 S-MGVFRQMQAAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILI 379
Query: 32 ETFGK 18
+ FG+
Sbjct: 380 QVFGE 384
Score = 60.8 bits (146), Expect = 2e-06
Identities = 41/179 (22%), Positives = 86/179 (48%)
Frame = -3
Query: 590 SLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEV 411
+++ F + + F Q G ++ +++ + M+++ C +E ++ + GL+++C E
Sbjct: 511 NVHTFNGMIEAFRQGGQFEEAIKAYVEMEKRR-CDHDEWTLEAVLSVYCVAGLVNECEEH 569
Query: 410 FDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVR 231
F EM A G+ SV + ++ Y RN ++ + ELL+ M + R S +I
Sbjct: 570 FQEMKASGILPSVMCYCMMLAVYARNDRWDDANELLNEMLTNRASNIHQVIGQMIKGDYD 629
Query: 230 VGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDI 54
+W+ + +F +++ +G + YNTLL A +A V + G+ P++
Sbjct: 630 DDSNWQMVEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKQRAVRVLNEATQRGLFPEL 688
>ref|XP_010428477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Camelina sativa]
Length = 864
Score = 440 bits (1131), Expect = e-120
Identities = 215/265 (81%), Positives = 238/265 (89%)
Frame = -3
Query: 797 FIRITQRRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIAR 618
F+ R+ S S +AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIAR
Sbjct: 36 FLSGGNRKPCSFSSGKIKAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIAR 95
Query: 617 CLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGRE 438
CLD+FKNKLSLNDF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGRE
Sbjct: 96 CLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGRE 155
Query: 437 GLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTY 258
GLLDKC EVFDEMP GVSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTY
Sbjct: 156 GLLDKCLEVFDEMPGQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTY 215
Query: 257 NTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMN 78
NT+I+AC R GLDWEGLLGLFA+MRH+GIQPD+VTYNTLL ACA R LGD+AEMVFR MN
Sbjct: 216 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 275
Query: 77 EAGIVPDITTHAYLVETFGKLEKLE 3
E GIVPD+TT+++LVETFGKL +LE
Sbjct: 276 EGGIVPDLTTYSHLVETFGKLRRLE 300
Score = 86.7 bits (213), Expect = 3e-14
Identities = 60/223 (26%), Positives = 103/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 286 YSHLVETF-GKLRRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 344
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 345 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 403
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P + TY II AC + GL E + M + I P Y
Sbjct: 404 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKILQYMTANDIVPSSKAYT 462
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++A + F M+E G P I T+ L+ +F +
Sbjct: 463 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFAR 505
>ref|XP_010471579.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X3 [Camelina sativa]
gi|727597185|ref|XP_010471580.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X4 [Camelina sativa]
Length = 863
Score = 439 bits (1130), Expect = e-120
Identities = 211/248 (85%), Positives = 232/248 (93%)
Frame = -3
Query: 746 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 567
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 566 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 387
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 386 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGL 207
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMKSE+ISPSILTYNT+I+AC R GLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKSEKISPSILTYNTVINACARGGLDWEGL 231
Query: 206 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVET 27
LGLFA+MRH+GIQPD+VTYNTLL ACA R LGD+AEMVFR MNE GIVPD+TT+++LVET
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNEGGIVPDLTTYSHLVET 291
Query: 26 FGKLEKLE 3
FGKL +LE
Sbjct: 292 FGKLRRLE 299
Score = 86.7 bits (213), Expect = 3e-14
Identities = 60/223 (26%), Positives = 103/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 285 YSHLVETF-GKLRRLEKVSDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P + TY II AC + GL E + M + I P Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKILQYMTANDIVPSSKAYT 461
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++A + F M+E G P I T+ L+ +F +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFAR 504
>ref|XP_012080160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Jatropha curcas]
gi|643720904|gb|KDP31168.1| hypothetical protein
JCGZ_11544 [Jatropha curcas]
Length = 866
Score = 439 bits (1130), Expect = e-120
Identities = 227/311 (72%), Positives = 254/311 (81%), Gaps = 10/311 (3%)
Frame = -3
Query: 905 LTFSPS--IPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRITQRRLISNS--------I 756
+T SPS IPN + ST L S + F F P+F RRLIS S
Sbjct: 1 MTISPSLCIPNSSPISTELLKSKPKPHRFPF-----PNFP--VHRRLISVSGDHRTYSGA 53
Query: 755 KPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF 576
RAK KEL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCL++FKNKLSLNDF
Sbjct: 54 GKARAKSKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKNKLSLNDF 113
Query: 575 VLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMP 396
LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLL+KCAE+F+EMP
Sbjct: 114 SLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCAEIFEEMP 173
Query: 395 AHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDW 216
HGV RSVFS+TALIN+YGR+GQY+VSLELL+RM+ E++ P ILTYNT+I++C R GLDW
Sbjct: 174 THGVPRSVFSYTALINSYGRHGQYEVSLELLERMRKEKVPPGILTYNTVINSCARGGLDW 233
Query: 215 EGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYL 36
EGLL LFA+MRH+GIQPD+VTYNTLL ACA R LGD+AEMVFR MNE G+VPDITT+ L
Sbjct: 234 EGLLSLFAEMRHEGIQPDIVTYNTLLNACADRGLGDEAEMVFRTMNEGGMVPDITTYRNL 293
Query: 35 VETFGKLEKLE 3
VETFGKLEKLE
Sbjct: 294 VETFGKLEKLE 304
Score = 102 bits (253), Expect = 7e-19
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 6/235 (2%)
Frame = -3
Query: 704 TVEKGKYSYDVETLIN------KLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRG 543
T+ +G D+ T N KL L + + ++ N ++ + ++ + +A++G
Sbjct: 277 TMNEGGMVPDITTYRNLVETFGKLEKLEKVSQLLKEMESSGNLPEISSYNVLLEAYARKG 336
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
+ + ++ +F+ MQ + C PN Y+I++ L GR G D E+F EM V ++
Sbjct: 337 NIKDAMGVFRQMQ-EAGCVPNAVTYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDVATY 395
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
LI +G G +K + L M E + P++ TY +I+AC + GL E + M
Sbjct: 396 NILIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLH-EDAKKILLHMD 454
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
G+ P Y +++ A AL D+A ++F MNE G P + T+ L+ F +
Sbjct: 455 EQGVVPSSKAYTSVIEAYGQAALYDEALVMFNTMNEMGSKPTVDTYNSLIYMFAR 509
Score = 61.2 bits (147), Expect = 1e-06
Identities = 37/156 (23%), Positives = 74/156 (47%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ YT +I G+ L D+ +F+ M G +V ++ +LI + R G YK S +
Sbjct: 460 PSSKAYTSVIEAYGQAALYDEALVMFNTMNEMGSKPTVDTYNSLIYMFARGGLYKESEAI 519
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L +M ++ ++N +I + G +E + + +M +PD + +L
Sbjct: 520 LWKMGESGVAQDRNSFNGLIEG-YKQGGQFEEAIKAYVEMEKARFEPDERSLEAVLSVYC 578
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
+ L D++E FR + +GI+P + + ++ + K
Sbjct: 579 AAGLIDESEEQFREIRASGILPSVMCYCMMLAVYAK 614
Score = 60.8 bits (146), Expect = 2e-06
Identities = 40/184 (21%), Positives = 88/184 (47%)
Frame = -3
Query: 584 NDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFD 405
N F + + + Q G ++ +++ + M++ + +P+E ++ + GL+D+ E F
Sbjct: 533 NSFNGLIEGYKQGGQFEEAIKAYVEMEKARF-EPDERSLEAVLSVYCAAGLIDESEEQFR 591
Query: 404 EMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVG 225
E+ A G+ SV + ++ Y ++ ++ E+LD M + R+S +I
Sbjct: 592 EIRASGILPSVMCYCMMLAVYAKSNRWNEVYEVLDEMVTNRVSNIHQVIGQMIKGDYDDD 651
Query: 224 LDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTH 45
+W+ + +F +++ +G + YNTLL A ++A V + G+ P++
Sbjct: 652 SNWQMVEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKERAARVLNEATKRGLFPELFRE 711
Query: 44 AYLV 33
+ LV
Sbjct: 712 SKLV 715
>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
gi|508773301|gb|EOY20557.1| Plastid transcriptionally
active 2 isoform 3 [Theobroma cacao]
Length = 811
Score = 439 bits (1130), Expect = e-120
Identities = 215/286 (75%), Positives = 245/286 (85%), Gaps = 13/286 (4%)
Frame = -3
Query: 821 FFQLKKPSFIRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 681
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 680 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 501
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 500 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 321
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 320 VSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 141
+SLELLD+MK +++ PSILTYNT+I+AC R GLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 140 LGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L ACA+R LG++AEMVFR MNE GI+PD+TT++YLVE+FGKL KLE
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294
Score = 95.5 bits (236), Expect = 7e-17
Identities = 64/223 (28%), Positives = 104/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P++ TY+ +I AC + GL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++ + F MNE P I T+ L++TF +
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFAR 499
Score = 80.1 bits (196), Expect = 3e-12
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M E+ PD T+ L+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILI 389
Query: 32 ETFGK 18
+ FG+
Sbjct: 390 QVFGE 394
>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
gi|508773300|gb|EOY20556.1| Plastid transcriptionally
active 2 isoform 2 [Theobroma cacao]
Length = 770
Score = 439 bits (1130), Expect = e-120
Identities = 215/286 (75%), Positives = 245/286 (85%), Gaps = 13/286 (4%)
Frame = -3
Query: 821 FFQLKKPSFIRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 681
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 680 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 501
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 500 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 321
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 320 VSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 141
+SLELLD+MK +++ PSILTYNT+I+AC R GLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 140 LGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L ACA+R LG++AEMVFR MNE GI+PD+TT++YLVE+FGKL KLE
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294
Score = 95.5 bits (236), Expect = 7e-17
Identities = 64/223 (28%), Positives = 104/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P++ TY+ +I AC + GL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++ + F MNE P I T+ L++TF +
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFAR 499
Score = 80.1 bits (196), Expect = 3e-12
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M E+ PD T+ L+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILI 389
Query: 32 ETFGK 18
+ FG+
Sbjct: 390 QVFGE 394
>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
gi|508773299|gb|EOY20555.1| Plastid transcriptionally
active 2 isoform 1 [Theobroma cacao]
Length = 859
Score = 439 bits (1130), Expect = e-120
Identities = 215/286 (75%), Positives = 245/286 (85%), Gaps = 13/286 (4%)
Frame = -3
Query: 821 FFQLKKPSFIRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 681
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 680 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 501
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 500 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 321
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 320 VSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 141
+SLELLD+MK +++ PSILTYNT+I+AC R GLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 140 LGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L ACA+R LG++AEMVFR MNE GI+PD+TT++YLVE+FGKL KLE
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294
Score = 95.5 bits (236), Expect = 7e-17
Identities = 64/223 (28%), Positives = 104/223 (46%)
Frame = -3
Query: 686 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 507
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 506 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 327
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 326 YKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYN 147
+K + L M E I P++ TY+ +I AC + GL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 146 TLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
++ A AL ++ + F MNE P I T+ L++TF +
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFAR 499
Score = 80.1 bits (196), Expect = 3e-12
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 4/245 (1%)
Frame = -3
Query: 740 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 570
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 569 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 393
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 392 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWE 213
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 212 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
+G+F QM+ G P+ TY+ LL D +F M E+ PD T+ L+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILI 389
Query: 32 ETFGK 18
+ FG+
Sbjct: 390 QVFGE 394
>ref|XP_013589729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Brassica oleracea var.
oleracea]
Length = 910
Score = 438 bits (1127), Expect = e-120
Identities = 220/295 (74%), Positives = 247/295 (83%)
Frame = -3
Query: 887 IPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRITQRRLISNSIKPPRAKPKELILGNPS 708
I NP T R S+ N KKPS S+ AK K+L+LGNPS
Sbjct: 64 IQNPTFTGN-RRFSSNPNRLSFLSAAKKPS------------SVAKINAKTKDLVLGNPS 110
Query: 707 VTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRS 528
V+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LVFKEFA RGDWQRS
Sbjct: 111 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 170
Query: 527 LRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALIN 348
LRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ GV+RSVFS+TALIN
Sbjct: 171 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVARSVFSYTALIN 230
Query: 347 AYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQ 168
AYGRNG+Y+ SLELL+RMKSE+ISPSILTYNT+I+AC R GLDWEGLLGLFA+MRH+GIQ
Sbjct: 231 AYGRNGRYETSLELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 290
Query: 167 PDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
PD+VTYNTLLGACA R LGD++EMVFR MN+ GIVPD+TT+++LVETFGKL +LE
Sbjct: 291 PDIVTYNTLLGACAIRGLGDESEMVFRTMNDGGIVPDLTTYSHLVETFGKLGRLE 345
Score = 85.1 bits (209), Expect = 9e-14
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Frame = -3
Query: 704 TVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLS------LNDFVLVFKEFAQRG 543
T+ G D+ T + + + G + + D+ S + + ++ + +A+ G
Sbjct: 318 TMNDGGIVPDLTTYSHLVETFGKLGRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSG 377
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
+ ++ +F MQ C PN + Y++++ L G+ G D ++F EM + ++
Sbjct: 378 SIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 436
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
LI+ +G G +K + L M E I P + TY II AC + GL E + M
Sbjct: 437 NILIDVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKILQYMT 495
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
+ P Y ++ A AL ++A + F M+E G P I T L+ +F +
Sbjct: 496 AKDVVPSSKAYTGVIEAFGQVALYEEAIVAFNTMHEVGSNPSIETFHSLLYSFAR 550
Score = 78.6 bits (192), Expect = 9e-12
Identities = 42/161 (26%), Positives = 80/161 (49%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ Y +++ + G + + VF +M A G + + +++ L+N +G++G+Y +L
Sbjct: 361 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 420
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
MKS P TYN +I G ++ ++ LF M + I+PD+ TY ++ AC
Sbjct: 421 FLEMKSSNTDPDAATYNILIDVFGEGGY-FKEVVTLFHDMVEENIEPDMETYEGIIFACG 479
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L + A + + M +VP + ++E FG++ E
Sbjct: 480 KGGLHEDARKILQYMTAKDVVPSSKAYTGVIEAFGQVALYE 520
Score = 60.5 bits (145), Expect = 2e-06
Identities = 40/159 (25%), Positives = 72/159 (45%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ YT +I G+ L ++ F+ M G + S+ +F +L+ ++ R G +K S +
Sbjct: 501 PSSKAYTGVIEAFGQVALYEEAIVAFNTMHEVGSNPSIETFHSLLYSFARGGLFKESEVI 560
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L R+ I + T+N I A + G +E + + M PD T +L +
Sbjct: 561 LSRLVDSGIPRNRDTFNATIEA-YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLNVYS 619
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEK 9
L D+ F M + I+P I + ++ +GK E+
Sbjct: 620 CARLVDECREQFEEMKASDILPSIMCYCMMLSVYGKTER 658
Score = 60.1 bits (144), Expect = 3e-06
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Frame = -3
Query: 674 VETLINKLSSLPPRGSIARCLDVFKNKL-------SLNDFVLVFKEFAQRGDWQRSLRLF 516
+ET + L S RG + + +V ++L + + F + + Q G ++ +++ +
Sbjct: 538 IETFHSLLYSFA-RGGLFKESEVILSRLVDSGIPRNRDTFNATIEAYKQGGKFEEAVKTY 596
Query: 515 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 336
M++ C P+E ++ + L+D+C E F+EM A + S+ + +++ YG+
Sbjct: 597 VDMEKSR-CDPDERTLEAVLNVYSCARLVDECREQFEEMKASDILPSIMCYCMMLSVYGK 655
Query: 335 NGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLV 156
++ + ELL+ M S R+S +I +W+ + + ++ +G +
Sbjct: 656 TERWDDANELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLSSEGCGLGIR 715
Query: 155 TYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
YN LL A ++A V + GI P++ LV
Sbjct: 716 FYNALLDALWWLGQKERAARVLNEATKRGIFPELFRRNKLV 756
>ref|XP_013589728.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Brassica oleracea var.
oleracea]
Length = 911
Score = 438 bits (1127), Expect = e-120
Identities = 220/295 (74%), Positives = 247/295 (83%)
Frame = -3
Query: 887 IPNPAITSTFLRPSNGENPYFSFFQLKKPSFIRITQRRLISNSIKPPRAKPKELILGNPS 708
I NP T R S+ N KKPS S+ AK K+L+LGNPS
Sbjct: 64 IQNPTFTGN-RRFSSNPNRLSFLSAAKKPS------------SVAKINAKTKDLVLGNPS 110
Query: 707 VTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRS 528
V+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LVFKEFA RGDWQRS
Sbjct: 111 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 170
Query: 527 LRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALIN 348
LRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ GV+RSVFS+TALIN
Sbjct: 171 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVARSVFSYTALIN 230
Query: 347 AYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQ 168
AYGRNG+Y+ SLELL+RMKSE+ISPSILTYNT+I+AC R GLDWEGLLGLFA+MRH+GIQ
Sbjct: 231 AYGRNGRYETSLELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 290
Query: 167 PDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
PD+VTYNTLLGACA R LGD++EMVFR MN+ GIVPD+TT+++LVETFGKL +LE
Sbjct: 291 PDIVTYNTLLGACAIRGLGDESEMVFRTMNDGGIVPDLTTYSHLVETFGKLGRLE 345
Score = 85.1 bits (209), Expect = 9e-14
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Frame = -3
Query: 704 TVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLS------LNDFVLVFKEFAQRG 543
T+ G D+ T + + + G + + D+ S + + ++ + +A+ G
Sbjct: 318 TMNDGGIVPDLTTYSHLVETFGKLGRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSG 377
Query: 542 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 363
+ ++ +F MQ C PN + Y++++ L G+ G D ++F EM + ++
Sbjct: 378 SIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 436
Query: 362 TALINAYGRNGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMR 183
LI+ +G G +K + L M E I P + TY II AC + GL E + M
Sbjct: 437 NILIDVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKILQYMT 495
Query: 182 HDGIQPDLVTYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGK 18
+ P Y ++ A AL ++A + F M+E G P I T L+ +F +
Sbjct: 496 AKDVVPSSKAYTGVIEAFGQVALYEEAIVAFNTMHEVGSNPSIETFHSLLYSFAR 550
Score = 78.6 bits (192), Expect = 9e-12
Identities = 42/161 (26%), Positives = 80/161 (49%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ Y +++ + G + + VF +M A G + + +++ L+N +G++G+Y +L
Sbjct: 361 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 420
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
MKS P TYN +I G ++ ++ LF M + I+PD+ TY ++ AC
Sbjct: 421 FLEMKSSNTDPDAATYNILIDVFGEGGY-FKEVVTLFHDMVEENIEPDMETYEGIIFACG 479
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEKLE 3
L + A + + M +VP + ++E FG++ E
Sbjct: 480 KGGLHEDARKILQYMTAKDVVPSSKAYTGVIEAFGQVALYE 520
Score = 60.5 bits (145), Expect = 2e-06
Identities = 40/159 (25%), Positives = 72/159 (45%)
Frame = -3
Query: 485 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 306
P+ YT +I G+ L ++ F+ M G + S+ +F +L+ ++ R G +K S +
Sbjct: 501 PSSKAYTGVIEAFGQVALYEEAIVAFNTMHEVGSNPSIETFHSLLYSFARGGLFKESEVI 560
Query: 305 LDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 126
L R+ I + T+N I A + G +E + + M PD T +L +
Sbjct: 561 LSRLVDSGIPRNRDTFNATIEA-YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLNVYS 619
Query: 125 SRALGDQAEMVFRGMNEAGIVPDITTHAYLVETFGKLEK 9
L D+ F M + I+P I + ++ +GK E+
Sbjct: 620 CARLVDECREQFEEMKASDILPSIMCYCMMLSVYGKTER 658
Score = 60.1 bits (144), Expect = 3e-06
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Frame = -3
Query: 674 VETLINKLSSLPPRGSIARCLDVFKNKL-------SLNDFVLVFKEFAQRGDWQRSLRLF 516
+ET + L S RG + + +V ++L + + F + + Q G ++ +++ +
Sbjct: 538 IETFHSLLYSFA-RGGLFKESEVILSRLVDSGIPRNRDTFNATIEAYKQGGKFEEAVKTY 596
Query: 515 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 336
M++ C P+E ++ + L+D+C E F+EM A + S+ + +++ YG+
Sbjct: 597 VDMEKSR-CDPDERTLEAVLNVYSCARLVDECREQFEEMKASDILPSIMCYCMMLSVYGK 655
Query: 335 NGQYKVSLELLDRMKSERISPSILTYNTIIHACVRVGLDWEGLLGLFAQMRHDGIQPDLV 156
++ + ELL+ M S R+S +I +W+ + + ++ +G +
Sbjct: 656 TERWDDANELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLSSEGCGLGIR 715
Query: 155 TYNTLLGACASRALGDQAEMVFRGMNEAGIVPDITTHAYLV 33
YN LL A ++A V + GI P++ LV
Sbjct: 716 FYNALLDALWWLGQKERAARVLNEATKRGIFPELFRRNKLV 756