BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00019330
         (2005 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...   721   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   682   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              681   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...   681   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...   677   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...   677   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...   676   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   676   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   674   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   674   0.0  
gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sin...   671   0.0  
ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV a...   669   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV a...   669   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   667   0.0  
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   666   0.0  
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a...   653   0.0  
emb|CDP09677.1| unnamed protein product [Coffea canephora]            650   0.0  
gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]   644   0.0  
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob...   642   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...   642   0.0  

>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score =  721 bits (1860), Expect = 0.0
 Identities = 344/566 (60%), Positives = 439/566 (77%)
 Frame = -2

Query: 1698 KTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 1519
            +  N   + EK +      +E +NLSE++L+KFC++ S++FF+E+GLI+HQI SYN F+E
Sbjct: 20   ENGNNMEIDEKGAMGI---KEKLNLSEQYLSKFCREASMAFFKEFGLISHQINSYNDFIE 76

Query: 1518 HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEK 1339
            +G+Q LFDS+  I V PG+DPSKKG G W++A++ FGKV +D+P FWTGEKFS + + ++
Sbjct: 77   NGLQTLFDSLGEIKVGPGYDPSKKGGGGWRHASIKFGKVTVDRPNFWTGEKFSSEKSDKE 136

Query: 1338 YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVV 1159
            YLKL PRHARLQNMTYSAR+K  V+++VYT NL+ +DKFKSG++  +Q  V S+D   VV
Sbjct: 137  YLKLLPRHARLQNMTYSARLKAEVRVQVYTVNLINSDKFKSGQDKIIQNDVKSDDNYVVV 196

Query: 1158 IGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWL 979
            +GRIPVMV+S++CW+N L K+DCDFD GGYF++KG EK FIAQEQ+CL RLWV   P+W+
Sbjct: 197  LGRIPVMVRSSLCWMNELGKSDCDFDHGGYFLIKGTEKTFIAQEQICLKRLWVSSKPSWM 256

Query: 978  VQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDK 799
            V YRS+    K+RRV I++ + P  E  Y  GG VL ++F+S  IPLWI+FFALG SSDK
Sbjct: 257  VSYRSNL---KKRRVYIKLIETPKPE--YLQGGNVLNVYFLSSTIPLWILFFALGASSDK 311

Query: 798  EIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEE 619
            EIV+ I++DISDA  VNILL+TI +A++ C+ F KE +ALK++D  IKNTKFPP + IE+
Sbjct: 312  EIVEMIDLDISDATFVNILLSTICDADEKCEGFRKEGKALKHIDELIKNTKFPPTDSIED 371

Query: 618  VIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXX 439
            ++   LFP L+  ++KA+FLGYMVK L L YTGRRKCENRDDFRNK              
Sbjct: 372  ILNNSLFPALSSYREKALFLGYMVKCLLLSYTGRRKCENRDDFRNKRLELAGDLLERELR 431

Query: 438  AHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIA 259
             HI HA+R+M + MQKDLYGDR + PI++YLDASIITNGL+RAFSTG W+HPF   E+++
Sbjct: 432  VHIRHAQRRMTKAMQKDLYGDRALHPIEHYLDASIITNGLTRAFSTGAWSHPFNTGERLS 491

Query: 258  GVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVK 79
            GVVA LRR NPLQM +D+RKTRQQV Y GK GDARFPNPSHWGKLCFLSTPDGE CGLVK
Sbjct: 492  GVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVK 551

Query: 78   NMAITGLVSTNLMEPLKDKLFDCGME 1
            N+AITGLVSTN +EPL D L +CGME
Sbjct: 552  NLAITGLVSTNSVEPLLDILLNCGME 577


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score =  682 bits (1759), Expect = 0.0
 Identities = 331/550 (60%), Positives = 422/550 (76%), Gaps = 2/550 (0%)
 Frame = -2

Query: 1644 DQEPIN-LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEP 1468
            D  PI  L E FL  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEP
Sbjct: 56   DVGPIKELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEP 115

Query: 1467 GFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYS 1288
            G+DPSK+G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L+PRHARLQNMTYS
Sbjct: 116  GYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKE-YLDLWPRHARLQNMTYS 174

Query: 1287 ARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNG 1108
            AR+ V   ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG
Sbjct: 175  ARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNG 234

Query: 1107 LDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKI 928
            +DK DC+FD GGYF+VKGAEK FIAQEQ+CL RLWV  SPTW V YR    V KR RV I
Sbjct: 235  VDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRP---VAKRNRVYI 291

Query: 927  EIDDAPTGEDQYFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTV 751
            ++  A T + ++  G  K LT++F   ++P+WI+FFALG+SSD+E+VD I+VDI D   V
Sbjct: 292  KL--AETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIV 349

Query: 750  NILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQK 571
            NIL+A+I++A+K C+ F K ++AL Y+D  IK  +FPP E +EE I +YLFP+L+G KQK
Sbjct: 350  NILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQK 409

Query: 570  AVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQK 391
            A FLGYMVK L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+
Sbjct: 410  ARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQR 469

Query: 390  DLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMAS 211
            DLYGDR ++PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA +RR NPLQM +
Sbjct: 470  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTA 529

Query: 210  DLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPL 31
            D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL
Sbjct: 530  DMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 589

Query: 30   KDKLFDCGME 1
             + L+ CGM+
Sbjct: 590  LETLYRCGMQ 599


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  681 bits (1757), Expect = 0.0
 Identities = 331/571 (57%), Positives = 430/571 (75%), Gaps = 5/571 (0%)
 Frame = -2

Query: 1698 KTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 1519
            K SNG  V  +         E  +L++E+L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 55   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 112

Query: 1518 HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEK 1339
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 113  NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 168

Query: 1338 YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 1162
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 169  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 227

Query: 1161 VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 982
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 228  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 287

Query: 981  LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 802
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 288  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 342

Query: 801  KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEREALKYMDGQIKNTKFPPV 634
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++  A+ ++D  +K+ KFPP 
Sbjct: 343  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 402

Query: 633  EEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 454
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 403  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 462

Query: 453  XXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 274
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 463  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 522

Query: 273  SEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 94
             E+I+GVVA LRR NPLQM +D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 523  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 582

Query: 93   CGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            CGLVKN+AITGLVST +++PL DKLFDCGME
Sbjct: 583  CGLVKNLAITGLVSTEVLDPLVDKLFDCGME 613


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score =  681 bits (1757), Expect = 0.0
 Identities = 331/571 (57%), Positives = 430/571 (75%), Gaps = 5/571 (0%)
 Frame = -2

Query: 1698 KTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 1519
            K SNG  V  +         E  +L++E+L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 19   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 76

Query: 1518 HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEK 1339
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 77   NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 132

Query: 1338 YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 1162
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 133  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 191

Query: 1161 VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 982
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 192  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 251

Query: 981  LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 802
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 252  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 306

Query: 801  KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEREALKYMDGQIKNTKFPPV 634
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++  A+ ++D  +K+ KFPP 
Sbjct: 307  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 366

Query: 633  EEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 454
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 367  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 426

Query: 453  XXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 274
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 427  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 486

Query: 273  SEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 94
             E+I+GVVA LRR NPLQM +D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 487  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 546

Query: 93   CGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            CGLVKN+AITGLVST +++PL DKLFDCGME
Sbjct: 547  CGLVKNLAITGLVSTEVLDPLVDKLFDCGME 577


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score =  677 bits (1748), Expect = 0.0
 Identities = 329/550 (59%), Positives = 420/550 (76%), Gaps = 2/550 (0%)
 Frame = -2

Query: 1644 DQEPIN-LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEP 1468
            D  PI  L E FL  FCK  S  FFE+YGLI+HQI SYN F+  GIQ++FD +  I VEP
Sbjct: 52   DVAPIKELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEP 111

Query: 1467 GFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYS 1288
            G+DPSK+G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L+PRHARLQNMTYS
Sbjct: 112  GYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKE-YLDLWPRHARLQNMTYS 170

Query: 1287 ARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNG 1108
            AR+ V   ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG
Sbjct: 171  ARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNG 230

Query: 1107 LDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKI 928
            +DK DC+FD GGYF+VKGAEK FIAQEQ+CL RLWV  SPTW V YR    V KR RV I
Sbjct: 231  VDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRP---VAKRNRVYI 287

Query: 927  EIDDAPTGEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTV 751
            ++  A T + ++  G  K LT++F   ++P+WI+FFALG+SSD+E+V+ I+VDI D   V
Sbjct: 288  KL--AETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIV 345

Query: 750  NILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQK 571
            NIL+A+I++A+K C+ F K ++AL Y+D  IK  +FPP E +EE I +YLFP+L+G KQK
Sbjct: 346  NILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQK 405

Query: 570  AVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQK 391
            A FLGYMVK L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+
Sbjct: 406  ARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQR 465

Query: 390  DLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMAS 211
            DLYGDR ++PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA +RR NPLQM +
Sbjct: 466  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTA 525

Query: 210  DLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPL 31
            D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL
Sbjct: 526  DMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 585

Query: 30   KDKLFDCGME 1
             + L+ CGM+
Sbjct: 586  LETLYRCGMQ 595


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score =  677 bits (1748), Expect = 0.0
 Identities = 329/550 (59%), Positives = 420/550 (76%), Gaps = 2/550 (0%)
 Frame = -2

Query: 1644 DQEPIN-LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEP 1468
            D  PI  L E FL  FCK  S  FFE+YGLI+HQI SYN F+  GIQ++FD +  I VEP
Sbjct: 62   DVAPIKELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEP 121

Query: 1467 GFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYS 1288
            G+DPSK+G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L+PRHARLQNMTYS
Sbjct: 122  GYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKE-YLDLWPRHARLQNMTYS 180

Query: 1287 ARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNG 1108
            AR+ V   ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG
Sbjct: 181  ARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNG 240

Query: 1107 LDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKI 928
            +DK DC+FD GGYF+VKGAEK FIAQEQ+CL RLWV  SPTW V YR    V KR RV I
Sbjct: 241  VDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRP---VAKRNRVYI 297

Query: 927  EIDDAPTGEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTV 751
            ++  A T + ++  G  K LT++F   ++P+WI+FFALG+SSD+E+V+ I+VDI D   V
Sbjct: 298  KL--AETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIV 355

Query: 750  NILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQK 571
            NIL+A+I++A+K C+ F K ++AL Y+D  IK  +FPP E +EE I +YLFP+L+G KQK
Sbjct: 356  NILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQK 415

Query: 570  AVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQK 391
            A FLGYMVK L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+
Sbjct: 416  ARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQR 475

Query: 390  DLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMAS 211
            DLYGDR ++PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA +RR NPLQM +
Sbjct: 476  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTA 535

Query: 210  DLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPL 31
            D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL
Sbjct: 536  DMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 595

Query: 30   KDKLFDCGME 1
             + L+ CGM+
Sbjct: 596  LETLYRCGMQ 605


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score =  676 bits (1744), Expect = 0.0
 Identities = 324/542 (59%), Positives = 415/542 (76%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L E FL  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 906  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 727
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 726  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 547
             A+K C+ F K ++AL Y+D  IKN KFPP E +EE I  YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 546  KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPM 367
            K L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 366  KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 187
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 186  VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCG 7
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 6    ME 1
            M+
Sbjct: 595  MQ 596


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  676 bits (1743), Expect = 0.0
 Identities = 323/542 (59%), Positives = 415/542 (76%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L E +L  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 906  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 727
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 726  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 547
             A+K C+ F K ++AL Y+D  IKN KFPP E +EE I  YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 546  KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPM 367
            K L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 366  KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 187
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 186  VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCG 7
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 6    ME 1
            M+
Sbjct: 595  MQ 596


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  674 bits (1739), Expect = 0.0
 Identities = 328/580 (56%), Positives = 427/580 (73%), Gaps = 3/580 (0%)
 Frame = -2

Query: 1731 SPTKIDVFSSFKTSN-GGSVSEKASTSTFTDQEPI-NLSEEFLNKFCKDISVSFFEEYGL 1558
            S  K D+  S K  N  G     +  + F D   + +L EEFL  FC+  +VSFF EYGL
Sbjct: 5    SNAKEDIAMSSKGENISGQDDMDSDDNGFIDPTSLRDLGEEFLKTFCRKAAVSFFNEYGL 64

Query: 1557 INHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFW 1378
            ++HQI SYN+F+++G+QK FDS     VEPG+DPSKKGEGEW+YA++ FG+V LDKP F+
Sbjct: 65   VSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDPSKKGEGEWRYASMRFGQVTLDKPSFF 124

Query: 1377 TGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSV 1198
             G    + D       +FPRHARLQNMTYS+RMKV V+ +VYTQ  + +DKFK+G+E  +
Sbjct: 125  AGNGGDEHD-------MFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKFKTGREQYI 177

Query: 1197 QKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLC 1018
            QK+V+S++  D++IGRIPVMVKS++CW+ G++K DCDFD GGYF++KGAEK F+AQEQ+C
Sbjct: 178  QKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQIC 237

Query: 1017 LNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGG-KVLTMHFMSCKIP 841
            L RLWV  S  W V Y+S+   NKR R+ + + D    ED    GG KVL+++F+S +IP
Sbjct: 238  LKRLWVSNSMGWTVAYKSE---NKRNRLIVRLVDMSKFED--IKGGEKVLSVYFLSTEIP 292

Query: 840  LWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMDGQ 661
            +WI+FFALG+SSDKEIV+ I+    D   +NIL A+I++A+  C  F K R ALKY+D  
Sbjct: 293  IWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALKYVDKL 352

Query: 660  IKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNK 481
            IK T FPP E  EE +  YLFP L+G KQKA FLGYMVK L   Y+GRRKC+NRDDFRNK
Sbjct: 353  IKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRDDFRNK 412

Query: 480  XXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFST 301
                           HI HA+++MA+ +Q+DLYGDR ++PI+YYLDASI+TNGLSRAFST
Sbjct: 413  RLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFST 472

Query: 300  GHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLC 121
            G W+HPFK++E+I+G+VANL R NPLQ   DLR+TRQQV Y GK GDAR+P+PSHWGK+C
Sbjct: 473  GAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKIC 532

Query: 120  FLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            FLSTPDGE CGLVKN+ +TGLVST+++EP+ ++LF+ GME
Sbjct: 533  FLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGME 572


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  674 bits (1738), Expect = 0.0
 Identities = 324/539 (60%), Positives = 419/539 (77%), Gaps = 1/539 (0%)
 Frame = -2

Query: 1614 FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 1435
            FL  FCK  S  FFE+YG+I+HQI+SYN F+ +GIQ++FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 1434 WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 1255
            WK+A+V FGKV LD+P FW GEKFS   N E+YL L+PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGKVTLDRPKFWAGEKFSAY-NGEEYLDLWPRHARLQNMTYSARIIVETHVQV 181

Query: 1254 YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 1075
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DCDFD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHG 241

Query: 1074 GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 895
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +  T + +
Sbjct: 242  GYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGE---KRNRVYLKLTE--TLKHE 296

Query: 894  YFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAE 718
            +  G  K L+++F++ ++P+W++FFALG+SSD+EIVD I+VDI D   +NIL+A+I++A+
Sbjct: 297  HIKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDAD 355

Query: 717  KACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYL 538
            K C+ F K ++AL Y+D  IK+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L
Sbjct: 356  KNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCL 415

Query: 537  FLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPI 358
             L Y GRRK +NRDDFRNK              AHI HA+R+M + +Q+DL GDR ++P+
Sbjct: 416  LLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPL 475

Query: 357  DYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGY 178
            ++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y
Sbjct: 476  EHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTY 535

Query: 177  VGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
             GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL + LF CGM+
Sbjct: 536  TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQ 594


>gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sinensis]
          Length = 1173

 Score =  671 bits (1732), Expect = 0.0
 Identities = 321/552 (58%), Positives = 418/552 (75%), Gaps = 2/552 (0%)
 Frame = -2

Query: 1650 FTDQEPI-NLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITV 1474
            FTD   + +L EEFL  FC+  +VSFF EYGL++HQI SYN+F+++G+QK FDS     V
Sbjct: 8    FTDPTSLCDLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIV 67

Query: 1473 EPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMT 1294
            EPG+DPSKKGEGEW+YA++ FG+V LDKP F+ G    + D       +FPRHARLQNMT
Sbjct: 68   EPGYDPSKKGEGEWRYASMRFGQVTLDKPSFFAGNGGDEHD-------MFPRHARLQNMT 120

Query: 1293 YSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWL 1114
            YS+RMKV V+ +VYTQ  + +DKFK+G+E  +QK+V+S++  +++IGRIPVMVKS++CW+
Sbjct: 121  YSSRMKVKVQFQVYTQKRVTSDKFKTGREQYIQKEVLSDETTNIIIGRIPVMVKSDLCWM 180

Query: 1113 NGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRV 934
             G++K DCDFD GGYF++KGAEK F+AQEQ+CL RLWV  S  W V Y+S+   NKR R+
Sbjct: 181  KGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSE---NKRNRL 237

Query: 933  KIEIDDAPTGEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDAR 757
             + + D    ED    GG KVL+++F+S +IP+WI+FFALG+SSDKEIV+ I+    D  
Sbjct: 238  IVRLVDMSKFED--IKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCS 295

Query: 756  TVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPK 577
             +NIL A+I++A+  C  F K R ALKY+D  IK T FPP E  EE +  YLFP L+G K
Sbjct: 296  ILNILFASIHDADNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTK 355

Query: 576  QKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDM 397
            QKA FLGYMVK L   Y+GRRKC+NRDDFRNK               HI HA+++MA+ +
Sbjct: 356  QKARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKAL 415

Query: 396  QKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQM 217
            Q+DLYGDR ++PI+YYLDASI+TNGLSRAFSTG W+HPFK++E+I+G+VANL R NPLQ 
Sbjct: 416  QRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQT 475

Query: 216  ASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLME 37
              DLR+TRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+ +TGLVST+++E
Sbjct: 476  LVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILE 535

Query: 36   PLKDKLFDCGME 1
            P+ ++LF+ GME
Sbjct: 536  PIFEQLFNSGME 547


>ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X1 [Solanum lycopersicum]
          Length = 1225

 Score =  669 bits (1727), Expect = 0.0
 Identities = 322/538 (59%), Positives = 413/538 (76%)
 Frame = -2

Query: 1614 FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 1435
            FL  FCK  S  FFE+YGLI+HQI+SYN F+ +GIQK+FDS+  I VEPG+DPSKKGEGE
Sbjct: 69   FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 128

Query: 1434 WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 1255
            WK+A+V FG V+LD+P FW GEK+S   N E+YL ++PRHARLQNMTYSAR+ V   ++V
Sbjct: 129  WKHASVKFGNVILDRPKFWAGEKYSAY-NGEEYLNMWPRHARLQNMTYSARIIVETHVQV 187

Query: 1254 YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 1075
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DC+FD G
Sbjct: 188  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 247

Query: 1074 GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 895
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +    E Q
Sbjct: 248  GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGE---KRNRVYLKLTETLKHE-Q 303

Query: 894  YFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEK 715
                 K L+++F++ ++P+W++FFALG+SSD+E+VD I+VDI D + +NIL+A+I++A+K
Sbjct: 304  IKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 362

Query: 714  ACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLF 535
             C+ F K + AL Y+D  IK+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L 
Sbjct: 363  NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 422

Query: 534  LCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPID 355
            L Y GRRK +NRDDFRNK               HI HA+R+M + +Q+DL GDR + PI+
Sbjct: 423  LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 482

Query: 354  YYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYV 175
            +YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y 
Sbjct: 483  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 542

Query: 174  GKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            GK GDAR+PNPSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++ PL + LF CGM+
Sbjct: 543  GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQ 600


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X2 [Solanum lycopersicum]
          Length = 1219

 Score =  669 bits (1727), Expect = 0.0
 Identities = 322/538 (59%), Positives = 413/538 (76%)
 Frame = -2

Query: 1614 FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 1435
            FL  FCK  S  FFE+YGLI+HQI+SYN F+ +GIQK+FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 1434 WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 1255
            WK+A+V FG V+LD+P FW GEK+S   N E+YL ++PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGNVILDRPKFWAGEKYSAY-NGEEYLNMWPRHARLQNMTYSARIIVETHVQV 181

Query: 1254 YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 1075
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DC+FD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 241

Query: 1074 GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 895
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +    E Q
Sbjct: 242  GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGE---KRNRVYLKLTETLKHE-Q 297

Query: 894  YFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEK 715
                 K L+++F++ ++P+W++FFALG+SSD+E+VD I+VDI D + +NIL+A+I++A+K
Sbjct: 298  IKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 356

Query: 714  ACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLF 535
             C+ F K + AL Y+D  IK+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L 
Sbjct: 357  NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 416

Query: 534  LCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPID 355
            L Y GRRK +NRDDFRNK               HI HA+R+M + +Q+DL GDR + PI+
Sbjct: 417  LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 476

Query: 354  YYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYV 175
            +YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y 
Sbjct: 477  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 536

Query: 174  GKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            GK GDAR+PNPSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++ PL + LF CGM+
Sbjct: 537  GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQ 594


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  667 bits (1720), Expect = 0.0
 Identities = 320/542 (59%), Positives = 411/542 (75%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L E FL  FCK  S  FFE+YG I+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 55   LGESFLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 114

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            G+G+WK+A+V FGKV L++P FW GEKFS    KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 115  GDGDWKHASVKFGKVTLERPKFWAGEKFSVGGGKE-YLDLLPRHARLQNMTYSARIMVET 173

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             ++VYT+ L+++DKFK+G +  V K+   E +RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 174  HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCE 233

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF+ KGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 234  FDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 288

Query: 906  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 727
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 289  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 348

Query: 726  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 547
             A+K C+ F K ++AL Y+D  IKN KFPP E +EE I  YLFP+L+G KQKA FLGYMV
Sbjct: 349  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 408

Query: 546  KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPM 367
            K L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+DLYGDR +
Sbjct: 409  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 468

Query: 366  KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 187
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +D+RK+RQQ
Sbjct: 469  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 528

Query: 186  VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCG 7
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 529  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 588

Query: 6    ME 1
            M+
Sbjct: 589  MQ 590


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  666 bits (1719), Expect = 0.0
 Identities = 326/582 (56%), Positives = 433/582 (74%), Gaps = 16/582 (2%)
 Frame = -2

Query: 1698 KTSNGGSVSEKASTSTFT-----------DQEPINLSEE----FLNKFCKDISVSFFEEY 1564
            KTSNG ++ +      F            + + +++++E    FL  FCK  S  FFE+Y
Sbjct: 24   KTSNGSTMMDFDVDGLFEVDDYDWDEDEDEDDNLDMAKELGGGFLRNFCKKASAGFFEKY 83

Query: 1563 GLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPM 1384
            G+I+HQI+SYN F+ +GIQ++FDS+  I VEPG+DPSKKGEG+WK+A+V FGKV LD+P 
Sbjct: 84   GVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWKHASVKFGKVTLDRPK 143

Query: 1383 FWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEH 1204
            FW GEKFS   N E+YL L+PRHARLQNMTYSAR  + V+  V+T+ L+++DKFK+G E 
Sbjct: 144  FWAGEKFSAY-NGEEYLNLWPRHARLQNMTYSAR--IIVETHVFTKKLVRSDKFKTGVEQ 200

Query: 1203 SVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQ 1024
             V K+ + ED+RDV IGRIPVMV S +CW++G D+ DC+FD GGYF+VKGAEK FIAQEQ
Sbjct: 201  FVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCEFDHGGYFIVKGAEKIFIAQEQ 260

Query: 1023 LCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHG-GKVLTMHFMSCK 847
            +CL RLWV    TW+V YRS     KR RV +++ +  T + ++  G  K L+++F + +
Sbjct: 261  ICLKRLWVSNHSTWMVAYRSGE---KRNRVYLKLTE--TLKHEHIKGEAKALSVYFFA-E 314

Query: 846  IPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMD 667
            +P+W++FFALG+SSD+E+VD I+VDI D   +NIL+A+I++A+K C+ F K ++AL Y+D
Sbjct: 315  MPIWVLFFALGVSSDREVVDLIDVDIKDTNIINILVASIHDADKNCEDFRKGKKALAYVD 374

Query: 666  GQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFR 487
              +K+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L L Y GRRK +NRDDFR
Sbjct: 375  RLVKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGRRKVDNRDDFR 434

Query: 486  NKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAF 307
            NK               H+ HA+R+M + +Q+DL GDR ++PI++YLDASIITNGLSRAF
Sbjct: 435  NKRLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDASIITNGLSRAF 494

Query: 306  STGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGK 127
            STGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y GK GDAR+P+PSHWGK
Sbjct: 495  STGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDARYPHPSHWGK 554

Query: 126  LCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            +CFLSTPDGE CGLVKN+A  GLVST +++PL + LF CGM+
Sbjct: 555  VCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQ 596


>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] gi|802626342|ref|XP_012076430.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
            hypothetical protein JCGZ_07086 [Jatropha curcas]
          Length = 1209

 Score =  653 bits (1684), Expect = 0.0
 Identities = 327/597 (54%), Positives = 421/597 (70%), Gaps = 6/597 (1%)
 Frame = -2

Query: 1773 NVDEMEVDLNSLFHSPTKIDVFSSFKTSNGGSVSEKASTSTFTDQEPINLS-----EEFL 1609
            +VD ME D+ +        + F      N     +   +    D   +N S     E +L
Sbjct: 4    SVDAMEEDIGTSNKGEKLSNGFDMDIDMNNDDDDDDYDSDDDVDFMELNTSLSEMGEPYL 63

Query: 1608 NKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWK 1429
              FCK  +  FF EYGLI+HQI SYN F+ +G+QK FDS   + VEPG+DPSKKGE EW+
Sbjct: 64   KDFCKRAATLFFNEYGLISHQINSYNDFIGNGLQKAFDSFGELVVEPGYDPSKKGENEWR 123

Query: 1428 YANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYT 1249
            YA+V FGKV LDKP FW G     D N      + PRHARLQNMTYS+RMKV+V +EVYT
Sbjct: 124  YASVRFGKVTLDKPSFWGGSD-GTDHN------MLPRHARLQNMTYSSRMKVNVTVEVYT 176

Query: 1248 QNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGY 1069
            Q ++++DKFK+GK+  V K V+S D RD++IGRIPVMVKS++CW+   +++DCDFD GGY
Sbjct: 177  QKVIRSDKFKTGKDQFVDKVVLSTDNRDIIIGRIPVMVKSDLCWMKTAERSDCDFDHGGY 236

Query: 1068 FVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYF 889
            F++KGAEK FIAQEQ+CL RLW+    +W V Y+S+    KR R+ + + D    ED   
Sbjct: 237  FLIKGAEKVFIAQEQVCLKRLWISNIQSWTVSYKSEI---KRNRLIVRLVDLSKVED--I 291

Query: 888  HGGKV-LTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKA 712
             G K  L ++F+S +IPLWI+FFALG++SDKE++D I+ +  DA  VNI  A+I++A++ 
Sbjct: 292  KGEKKGLNVYFLSTEIPLWILFFALGITSDKEVIDLIDYNTEDASIVNIFFASIHDADEK 351

Query: 711  CQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFL 532
            C+ F  +REAL Y+  QI+ T+FPP  E E+ I  YLFP L+ P+QKA FLGYMVK L  
Sbjct: 352  CEGFRNDREALGYVIKQIQGTRFPP-GETEDCISLYLFPSLHSPRQKARFLGYMVKCLLQ 410

Query: 531  CYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDY 352
             Y+G+RKC+NRD FRNK               HI HA+R+MA+ +QKDLYGDR ++PI++
Sbjct: 411  AYSGQRKCDNRDSFRNKRFELAGELLDRELKVHIAHARRRMAKALQKDLYGDRDVRPIEH 470

Query: 351  YLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVG 172
            YLDASI+TNGLSRAFSTG W+HPFK+ E+I+GVVANL R NPLQ   DLRKTRQQV Y G
Sbjct: 471  YLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQQVQYTG 530

Query: 171  KGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDCGME 1
            K GDAR+P+PSHWG++CFLSTPDGE CGLVKN+AITGLVST ++EPL D LFDCGM+
Sbjct: 531  KVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAITGLVSTEILEPLIDILFDCGMD 587


>emb|CDP09677.1| unnamed protein product [Coffea canephora]
          Length = 1213

 Score =  650 bits (1677), Expect = 0.0
 Identities = 307/550 (55%), Positives = 414/550 (75%), Gaps = 8/550 (1%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L E+FL KFCK  + +FFE+YGLI+HQI SYN FV++GIQ++FDS+  I VEPGFDPSK+
Sbjct: 48   LGEDFLKKFCKKAATAFFEQYGLISHQINSYNNFVKYGIQEMFDSVGEIVVEPGFDPSKR 107

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            G+GEWKYA++ FGKV+LDKP FWTG+KF  D  KE YLK  PRHARLQ+MTYSAR+KV  
Sbjct: 108  GDGEWKYASIKFGKVILDKPDFWTGDKFFGDGGKE-YLKFLPRHARLQSMTYSARIKVET 166

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             ++VYT+ L+ +DK K+G+   ++ +   E++R+V+IGR+PVMV+S++CW+NG++K+DC+
Sbjct: 167  HVQVYTKKLLASDKAKTGRAVHIENECEKEEKREVIIGRLPVMVRSDLCWMNGVEKDDCE 226

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF++KGAEK F+AQEQ+CL RLW+   P W V YR    V +R+RV +++ D   
Sbjct: 227  FDHGGYFIIKGAEKTFVAQEQICLTRLWLSSVPCWTVSYRP---VARRKRVYLKLVDESK 283

Query: 906  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI- 730
              +    G +VL+++F+  ++P+WI+FFALG SSD+E+VD I+++I D +  NIL  +I 
Sbjct: 284  FAN-LIGGQRVLSVYFVIAEMPVWILFFALGASSDREVVDLIDLNIEDTKIANILTGSIY 342

Query: 729  ------NNAEKACQA-FSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQK 571
                   +A+  C+  F K R AL Y+   + N K+PP E +EE I   LFP+L G KQK
Sbjct: 343  YADTKFEDADLKCKGGFRKGRNALDYVQMLLNNCKYPPAESVEECISNLLFPNLTGFKQK 402

Query: 570  AVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQK 391
            A FLGYMVK L   YTGRRK +NRDDFRNK               H+ H +R+M + MQ+
Sbjct: 403  ACFLGYMVKCLLEAYTGRRKVDNRDDFRNKRLELASELLERELKVHLKHVERRMVKAMQR 462

Query: 390  DLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMAS 211
            DLYGDR ++ I++YLDASII+NGLSRAFSTG W+HP+KK+E+++GVVA+LRR NPLQM +
Sbjct: 463  DLYGDRSLQSIEHYLDASIISNGLSRAFSTGGWSHPYKKTERVSGVVASLRRTNPLQMTA 522

Query: 210  DLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPL 31
            D+RKTRQQV Y+GK GDAR+P+ SHWGK+CFLSTPDGE CGLVKN+A  GLVST ++EPL
Sbjct: 523  DMRKTRQQVSYIGKVGDARYPHCSHWGKICFLSTPDGENCGLVKNLASLGLVSTKVLEPL 582

Query: 30   KDKLFDCGME 1
             ++L DCG++
Sbjct: 583  IERLLDCGLK 592


>gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]
          Length = 1213

 Score =  644 bits (1661), Expect = 0.0
 Identities = 301/548 (54%), Positives = 411/548 (75%), Gaps = 5/548 (0%)
 Frame = -2

Query: 1629 NLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 1450
            +L E  +  FCK  S +FF+++GLI+HQI SYN FV +GIQ++FD+I  I+V PG+DPSK
Sbjct: 51   DLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDPSK 110

Query: 1449 KGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 1270
            KGEG W+YA+V FGKV L+ PMFWTGEKF  +  K+ Y+KL PRHARLQNMTYSAR+KV 
Sbjct: 111  KGEGGWRYASVKFGKVELEYPMFWTGEKFHAEGGKD-YMKLLPRHARLQNMTYSARLKVE 169

Query: 1269 VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 1090
             +L++YTQ  +K+DKFK+GK   + + V+ ++  +V++GR+PVMV S++CW++ ++K DC
Sbjct: 170  TRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKGDC 229

Query: 1089 DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 910
            +FD GGYF+VKGAEK FIAQEQ+CL RLW+   P W V YRS+    KRRRV +++ + P
Sbjct: 230  EFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYRSEF---KRRRVHVKLVENP 286

Query: 909  TGEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLAT 733
              E+    GG KV++++F   ++P+WI+FFALG+SSDKE+V+ I+    D R  NIL A+
Sbjct: 287  KAEN--IQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFAS 344

Query: 732  INNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGY 553
            I++A++ C  F +  +A++Y+D  I+ +KFPP E   E +GKYLFP L+G KQKA FL Y
Sbjct: 345  IHDADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAY 404

Query: 552  MVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDR 373
            MVK L   ++GRRKC+NRDDFRNK               H+ HA+++M + MQ+DLYG+R
Sbjct: 405  MVKCLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGER 464

Query: 372  PMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTR 193
             ++ I++YLDASI+TNGL+R+FSTG W HPFK++E+++GVVANLRR NPLQ   D+RKTR
Sbjct: 465  DLQSIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTR 524

Query: 192  QQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLME----PLKD 25
            QQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVS+++ +     L +
Sbjct: 525  QQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLE 584

Query: 24   KLFDCGME 1
             L  CGM+
Sbjct: 585  TLLRCGMD 592


>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1073

 Score =  642 bits (1655), Expect = 0.0
 Identities = 307/543 (56%), Positives = 403/543 (74%), Gaps = 1/543 (0%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L EEFL  FCK  +VSFF+EYGLI+HQ+ SYN F+++G+Q  FDS     +  G+DPSKK
Sbjct: 32   LGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDPSKK 91

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            GEG+W++A V FGKV +++P FW     ++       L + PRHARLQNMTYS+RMKV+V
Sbjct: 92   GEGDWRHARVRFGKVTVERPTFWAVSGGNE-------LNMLPRHARLQNMTYSSRMKVNV 144

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             L+VYT   +K+DKFK+G+E  V+++V+ +D RD++IGRIPVMV+S++CW+N ++K DCD
Sbjct: 145  DLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCD 204

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF++KG EK FIAQEQ+ + RLW+  S  W + YRS+    KR R+ I + +   
Sbjct: 205  FDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEV---KRNRLIIRLVE--N 259

Query: 906  GEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 730
             + +Y  GG KVLT++F+S +IP+W++FFALG+SSDKE+V+ I+ + +D+   NIL A+I
Sbjct: 260  SKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASI 319

Query: 729  NNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYM 550
             NA+  C  F + R A+ Y+   +K+T+FPP E IEE +  YLFP L   KQKA FLGYM
Sbjct: 320  RNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYM 379

Query: 549  VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRP 370
            VK L   YTGR KC+NRDDFRNK               HI HA+R+MA+ +Q+DLY DR 
Sbjct: 380  VKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRT 439

Query: 369  MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQ 190
            ++PI++YLDASI+TNGLSRAFSTG W+HP+K+ E+I+GVVANL R NPLQ   DLRKTRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 189  QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDC 10
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN+ME + DKLFD 
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 9    GME 1
            GME
Sbjct: 560  GME 562


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  642 bits (1655), Expect = 0.0
 Identities = 307/543 (56%), Positives = 403/543 (74%), Gaps = 1/543 (0%)
 Frame = -2

Query: 1626 LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 1447
            L EEFL  FCK  +VSFF+EYGLI+HQ+ SYN F+++G+Q  FDS     +  G+DPSKK
Sbjct: 32   LGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDPSKK 91

Query: 1446 GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 1267
            GEG+W++A V FGKV +++P FW     ++       L + PRHARLQNMTYS+RMKV+V
Sbjct: 92   GEGDWRHARVRFGKVTVERPTFWAVSGGNE-------LNMLPRHARLQNMTYSSRMKVNV 144

Query: 1266 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 1087
             L+VYT   +K+DKFK+G+E  V+++V+ +D RD++IGRIPVMV+S++CW+N ++K DCD
Sbjct: 145  DLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCD 204

Query: 1086 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 907
            FD GGYF++KG EK FIAQEQ+ + RLW+  S  W + YRS+    KR R+ I + +   
Sbjct: 205  FDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEV---KRNRLIIRLVE--N 259

Query: 906  GEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 730
             + +Y  GG KVLT++F+S +IP+W++FFALG+SSDKE+V+ I+ + +D+   NIL A+I
Sbjct: 260  SKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASI 319

Query: 729  NNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYM 550
             NA+  C  F + R A+ Y+   +K+T+FPP E IEE +  YLFP L   KQKA FLGYM
Sbjct: 320  RNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYM 379

Query: 549  VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRP 370
            VK L   YTGR KC+NRDDFRNK               HI HA+R+MA+ +Q+DLY DR 
Sbjct: 380  VKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRT 439

Query: 369  MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQ 190
            ++PI++YLDASI+TNGLSRAFSTG W+HP+K+ E+I+GVVANL R NPLQ   DLRKTRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 189  QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFDC 10
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN+ME + DKLFD 
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 9    GME 1
            GME
Sbjct: 560  GME 562