BLASTX nr result
ID: Papaver30_contig00019270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00019270
(1878 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013738980.1| PREDICTED: uncharacterized protein LOC106441... 137 3e-35
ref|XP_013689362.1| PREDICTED: uncharacterized protein LOC106393... 132 2e-34
ref|XP_010451627.1| PREDICTED: uncharacterized protein LOC104733... 130 4e-34
ref|XP_009123093.1| PREDICTED: uncharacterized protein LOC103847... 134 8e-34
ref|XP_013589311.1| PREDICTED: uncharacterized protein LOC106297... 129 1e-33
ref|XP_009105554.1| PREDICTED: uncharacterized protein LOC103831... 127 3e-33
ref|XP_013601482.1| PREDICTED: uncharacterized protein LOC106308... 130 7e-33
ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832... 129 1e-32
ref|XP_010431573.1| PREDICTED: uncharacterized protein LOC104715... 124 2e-32
ref|XP_013650374.1| PREDICTED: uncharacterized protein LOC106354... 114 2e-32
ref|XP_010495447.1| PREDICTED: uncharacterized protein LOC104772... 127 3e-32
ref|XP_009109959.1| PREDICTED: putative ribonuclease H protein A... 117 3e-32
ref|XP_009144152.1| PREDICTED: uncharacterized protein LOC103867... 125 7e-32
ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein A... 115 7e-32
ref|XP_013674535.1| PREDICTED: uncharacterized protein LOC106379... 120 1e-31
ref|XP_009114688.1| PREDICTED: uncharacterized protein LOC103839... 115 1e-31
ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein A... 115 2e-31
ref|XP_009126318.1| PREDICTED: putative ribonuclease H protein A... 125 2e-31
ref|XP_009119465.1| PREDICTED: putative ribonuclease H protein A... 130 2e-31
ref|XP_009129000.1| PREDICTED: putative ribonuclease H protein A... 119 2e-31
>ref|XP_013738980.1| PREDICTED: uncharacterized protein LOC106441757 [Brassica napus]
Length = 1118
Score = 137 bits (344), Expect(2) = 3e-35
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 4/281 (1%)
Frame = -2
Query: 1871 VVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGPE 1692
+ ++R+W K LT+ RL L+ V++ + F S F++ K I+E++S F W G
Sbjct: 691 IKTKLRSWTVKKLTYAGRLQLVTSVINGITNFWTSSFIIPKAVIREIDSLCTKFLWKGDI 750
Query: 1691 MGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLIK 1512
V W ++GGLS+++L+ N ++ +W L K++IW W ++ +++
Sbjct: 751 TATATAKVAWETCCLAKDKGGLSLRNLDAWNRACPLKMIWLLFFSKQSIWSSWFRAEILE 810
Query: 1511 D--QDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
+ FW + Q SW ++LD R+L +I F S NW P G + ++
Sbjct: 811 GDIELFWVINTRQKHSWLVNKLLDARELIYPWIRKNVQNGETSYFWSTNWSPYGKLSDYL 870
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNEEDEHQFIWRPS 1158
+V V + + + +NG WV P++ R ++ + LS N+ E + W P
Sbjct: 871 QTSTVVRFPVNRNATIAELWENGAWVVPNARSDRQLQVLSHLSTLTLNDH-EDELEWWPG 929
Query: 1157 KTRKV--FQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
+++ +Y+ + +P SW+ VWF IP+H FI
Sbjct: 930 NQKEIRFHTGAIYKLLCPSSPTVSWHKEVWFSGGIPKHMFI 970
Score = 42.0 bits (97), Expect(2) = 3e-35
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -1
Query: 1011 TRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGY 865
TR ++LSWG D C+ C G E+ H F + F IW+ + K G+
Sbjct: 981 TRDRILSWGLQTDPKCLYCNVGDESITHCFFECNFTWEIWKIIAAKCGF 1029
>ref|XP_013689362.1| PREDICTED: uncharacterized protein LOC106393177 [Brassica napus]
Length = 747
Score = 132 bits (332), Expect(2) = 2e-34
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Frame = -2
Query: 1871 VVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGPE 1692
+ ++ +W + L++ RL+L+ V+ + F S F++ K I ++NS F W G
Sbjct: 316 IKGKVNSWSLRALSYAGRLLLINTVIDGITNFWTSTFIIPKACIDKINSLCSSFLWHGSS 375
Query: 1691 MGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLIK 1512
G + V W V + EGGL +D+ N +++ +W L + +IW K ++K
Sbjct: 376 EGSHSARVAWDTVTLSKAEGGLGCRDIRAWNKACSIKLIWLLFSKSGSIWVALFKREILK 435
Query: 1511 D--QDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
FW + Q W+ ++L +R+LT ++ F +DNW P G + ++
Sbjct: 436 GDLSSFWTINPKQGYPWFVNKLLKYRELTYNWVKWHVGTGSSIKFCTDNWSPFGNISQFL 495
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEW-VFPDSMYARVVEAIQQLSYDEFNEEDEHQFIWRP 1161
+P +GV++ + D DNG W + P +V+ + EDE ++
Sbjct: 496 SPVPHNVMGVSLTATLRDLHDNGSWNIRPARTENQVLVQAHLTTISLSAIEDESYWVVDD 555
Query: 1160 SKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
+ +K +Y V H P W +VW K +P+H F+
Sbjct: 556 DEWKKYKTGAIYNLVKRHQPQVPWKHVVWLKGGVPKHCFL 595
Score = 43.9 bits (102), Expect(2) = 2e-34
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = -1
Query: 1011 TRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYV 862
TR +L+SWG +C++C+ +E+ +HL D F+ IW+ L ++G V
Sbjct: 606 TRDRLISWGLNVSPSCLLCSLANESRDHLLFDCCFSWDIWQQLASRVGLV 655
>ref|XP_010451627.1| PREDICTED: uncharacterized protein LOC104733777 [Camelina sativa]
Length = 1559
Score = 130 bits (327), Expect(2) = 4e-34
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 4/291 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
+++ +RI W +FL+F RL L+K VLS + F S F L KR ++E++S F F W G
Sbjct: 1122 ERIRSRISCWTCRFLSFAGRLQLIKSVLSSLTNFWLSAFRLPKRCLEEIDSLFSAFVWSG 1181
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
P++ + W V EGGL ++ L+ TNT ++ +W LV +IW W++ NL
Sbjct: 1182 PDLNTKKAKISWLDVCKPTHEGGLGLRRLQDTNTVCILKLIWRLVSANNSIWVNWVRRNL 1241
Query: 1517 IKDQDFWALRAPQ-NSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTW 1341
I+ FW++ SW R+IL +R L +F D W P G +
Sbjct: 1242 IRTGSFWSVNERSVGGSWMWRKILKYRDLAATLHKKEISSGTETSFWFDVWSPIGQLFAQ 1301
Query: 1340 INPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNEEDEHQFIWRP 1161
+ + +G+ + V + + + + ++ +A+ + + + +W+
Sbjct: 1302 LGNRGSIDMGIPQQSTVAEALSHHRRQHRVDILNQIEDALDSIR-QSVQLQGGDRSLWKQ 1360
Query: 1160 ---SKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFILCPALHKK 1017
S K + + + N +W+ VWF H P+ SFI ALH +
Sbjct: 1361 KNGSFKNKFTSYDTWCLIRQPNTPCAWSAGVWFTHSTPKFSFIAWLALHNR 1411
Score = 44.7 bits (104), Expect(2) = 4e-34
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ T KL+ W A +D C++C ET +HLF ++S +W L+ + ++W
Sbjct: 1411 RLSTGDKLVQWNAAEDGDCVLCQGYGETRDHLFFSCSYSSNVWSALVQNL-LGARFTTSW 1469
Query: 840 DEVVHWCVGAFKVRLVWKSLRNLFSMLI 757
+ V + RL LR +F I
Sbjct: 1470 VTLASLLVDSSTPRLPLFVLRYVFQSTI 1497
>ref|XP_009123093.1| PREDICTED: uncharacterized protein LOC103847769 [Brassica rapa]
Length = 1424
Score = 134 bits (338), Expect(2) = 8e-34
Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 5/284 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
+K+ RI TW ++FL++ RL L+K V+ + F AS ++L + I+++ + F W G
Sbjct: 992 EKIRCRISTWTSRFLSYAGRLQLIKAVIMSLVNFWASVYLLPSKCIRDIERICRAFLWSG 1051
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
PE+ V WS V EEGGL ++DL+V N ++ +W L+ ++W KWI+SNL
Sbjct: 1052 PELKSTGAKVAWSTVCWEKEEGGLGIRDLKVVNRVNVLKIIWRLLTGS-SLWGKWIRSNL 1110
Query: 1517 IKDQDFWALRA-PQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTW 1341
+K ++FW ++ Q SW R+++ R + R+F +F D+W KG + T
Sbjct: 1111 LKQKNFWEIKEDTQMGSWMWRKMIKMRGVARRFHKKDLGNGRNTSFWFDHWSEKGVLITL 1170
Query: 1340 INPEVLVSLGVTIHNKVVDFV--DNGEWVFPDSMYARVVEAIQQLSYDEFNEEDEHQFIW 1167
+ +V +G+ V + + D + S+ R +EA + + E+E +W
Sbjct: 1171 LGERGIVDMGIKREATVAEAIMRDKRRRSY-RSLALREIEAEMETVRRKLRVENEDVNMW 1229
Query: 1166 RP-SKTRKVFQRN-MYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
R S RK F + + + S SW +WF P+++F+
Sbjct: 1230 RDGSGYRKKFSTHATWMLLRSQKERCSWARSIWFSKATPKYAFV 1273
Score = 39.3 bits (90), Expect(2) = 8e-34
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGL 883
++ T +++ W D C++C E+ NHLF + F+S +W L
Sbjct: 1281 RLSTMDRIVQWDPGADTTCVLCKRDLESRNHLFFECSFSSQLWEQL 1326
>ref|XP_013589311.1| PREDICTED: uncharacterized protein LOC106297655 [Brassica oleracea
var. oleracea]
Length = 1066
Score = 129 bits (324), Expect(2) = 1e-33
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 3/281 (1%)
Frame = -2
Query: 1874 KVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGP 1695
+V AR+ +W K L+F RL+L+K V+S + F S F+L K IK +N+ F W G
Sbjct: 638 QVKARVSSWSAKSLSFAGRLLLIKTVISGIATFWCSTFILPKSCIKRINTICGMFLWKGS 697
Query: 1694 EMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLI 1515
G + V W V T E+GGL VKDL N ++ +W + +IW W K ++
Sbjct: 698 TEGHHTTRVAWETVTKTKEQGGLGVKDLLTWNKACALKLIWLMFFRAGSIWVAWFKDIVL 757
Query: 1514 K--DQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTW 1341
K + ++W+++ Q +SW+ +++ R + I F DNW P G +D++
Sbjct: 758 KGPETNYWSVKPSQRNSWFVNKLIKWRDIIYPMIKRRLGNGMSTRFWYDNWSPFGQLDSY 817
Query: 1340 INPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMY-ARVVEAIQQLSYDEFNEEDEHQFIWR 1164
+ P L ++ + + + G W+ P + +++ I + ++D +++
Sbjct: 818 LKPST-SRLRISKNETLSNLYQGGNWLIPPARSDTQLMLQIHLTTTALTTDDDYYEWEME 876
Query: 1163 PSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
T MY + + W +VW IPRH F+
Sbjct: 877 GKVTESYSMGGMYMYLCEDTGSVPWEKVVWSPFGIPRHDFL 917
Score = 43.9 bits (102), Expect(2) = 1e-33
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 1011 TRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGL 883
TR +LLSWG + C++C S +E+ +HLF + + +W G+
Sbjct: 928 TRDRLLSWGLTVNPLCLLCNSENESRDHLFFNCDYTHALWSGI 970
>ref|XP_009105554.1| PREDICTED: uncharacterized protein LOC103831412 [Brassica rapa]
Length = 769
Score = 127 bits (319), Expect(2) = 3e-33
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 3/276 (1%)
Frame = -2
Query: 1862 RIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGPEMGR 1683
++ +W + L+F RL+LL V++ + F +S FVL K I ++NS F W G G
Sbjct: 327 KVNSWSARSLSFAGRLLLLNTVIAGITNFWSSTFVLPKACISKINSLCGAFLWHGSSEGS 386
Query: 1682 YHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLIKD-- 1509
+ V W V EEGGL +DL N +++ +W L +IW W K+ ++K
Sbjct: 387 HSARVSWETVTLAKEEGGLGCRDLVAWNKACSLKLIWLLFSNSGSIWVAWYKAEVLKGSL 446
Query: 1508 QDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWINPE 1329
+FW + + SW+ ++L + +I F +DNW P G++ ++ P
Sbjct: 447 SNFWITKEKKKYSWFTNKLLKLGSIAYDWITVKVGNGREVRFWTDNWSPVGSIQKFLAPV 506
Query: 1328 VLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNE-EDEHQFIWRPSKT 1152
S+G+ + D W + R V+ LS ++ DE+++
Sbjct: 507 AANSMGIPSSATLHDMFVRDRWNIRPARSDRQVQIQAILSSVTLSQLPDEYEWTIEGKVW 566
Query: 1151 RKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSF 1044
K +Y+ + +H W G +W +PRHSF
Sbjct: 567 LKYQTGTIYKLLKNHAQTVPWKGAIWNSGGVPRHSF 602
Score = 44.7 bits (104), Expect(2) = 3e-33
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIW 892
++ TR +LLSWG C++C G E+ +HLF F+S +W
Sbjct: 611 RLPTRDRLLSWGLAVPATCLLCNQGDESRDHLFFSCTFSSELW 653
>ref|XP_013601482.1| PREDICTED: uncharacterized protein LOC106308928 [Brassica oleracea
var. oleracea]
Length = 1133
Score = 130 bits (327), Expect(2) = 7e-33
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 3/276 (1%)
Frame = -2
Query: 1862 RIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGPEMGR 1683
++ +W T+ L+F RL+LL V++ + F +S FVL K I ++NS F W G G
Sbjct: 691 KVNSWSTRSLSFAGRLLLLNTVIAGITNFWSSTFVLPKACISKINSLCGAFLWHGSAEGS 750
Query: 1682 YHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLIKD-- 1509
+ V W V EEGGL +DL N +++ +W L + +IW W K+ ++K
Sbjct: 751 HSARVSWETVTLAKEEGGLGCRDLVAWNKACSLKLIWLLFSKSGSIWVTWYKAEVLKGSL 810
Query: 1508 QDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWINPE 1329
+FW + + SW+ ++L + +I F +DNW P G++ + P
Sbjct: 811 SNFWITKEKKKYSWFTNKLLKLGSIAYDWITVKVGNGRKVRFWTDNWSPVGSIHKLLVPV 870
Query: 1328 VLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNE-EDEHQFIWRPSKT 1152
S+G+ I + D W + R V+ LS ++ DE+++
Sbjct: 871 TANSMGIPISATLYDLFVRDRWNIRPARSDRQVQIQAFLSSVALSQLPDEYEWTIEGKVW 930
Query: 1151 RKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSF 1044
K +Y+ + +H W G +W +PRHSF
Sbjct: 931 LKYQTGTIYKLLKNHAQTVPWKGAIWNSGGVPRHSF 966
Score = 40.4 bits (93), Expect(2) = 7e-33
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIW 892
++ TR +LLSWG C++ G E+ +HLF F+S +W
Sbjct: 975 RLPTRDRLLSWGLAVPATCLLFNQGDESRDHLFFSCSFSSELW 1017
>ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832284 [Brassica rapa]
Length = 1156
Score = 129 bits (325), Expect(2) = 1e-32
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 6/285 (2%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
DK+ +R+ +W+ + L+F RL L++ VL + F AS F L K +++L F W G
Sbjct: 711 DKIRSRVTSWQARQLSFAGRLQLIQSVLYSIISFWASVFPLSKGCVEDLEKMLNAFLWSG 770
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
V W V E GGL ++ + NT ++ +W++ ++W W+K +
Sbjct: 771 APDSARGAKVAWESVCTAKESGGLGLRRIAELNTVYGIKLLWNIFSGSDSLWVAWVKRHY 830
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
I FW SW R ++ R L R F+ +F DNW G + +
Sbjct: 831 IPPNLFWTADFTTVGSWIWRWLMKLRDLARPFLLTNVVSGRNTSFWHDNWTTDGPILSTT 890
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEW-VFPDSMYA--RVVEAIQQLSYDEFNEEDEHQFIW 1167
P + G+ I V V NG+W + S ++ R + ++ + N +E F+W
Sbjct: 891 GPTGPMVSGIPIDASVASAVTNGDWNISSRSRHSVLRYIRSVLPAQAPDVNSPNEDNFMW 950
Query: 1166 RPS---KTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
S + +R++ PA W+ +VWFK IPRHSFI
Sbjct: 951 LNSLADQPSDFSVSKFFRTLNPDPPAIPWHKVVWFKKRIPRHSFI 995
Score = 40.0 bits (92), Expect(2) = 1e-32
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLK 874
+M TR +L+SWG +C++C + E+ H+F + ++ +W ++ +
Sbjct: 1003 RMVTRDRLISWGMDVSPSCLLCGTRAESVKHIFFECDYSLRVWNDIMAR 1051
>ref|XP_010431573.1| PREDICTED: uncharacterized protein LOC104715904 [Camelina sativa]
Length = 1211
Score = 124 bits (310), Expect(2) = 2e-32
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 5/285 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
D + R +W + L++ RL LL V+ F S F+L K IK++ S + F W+G
Sbjct: 781 DALTKRFSSWAARALSYAGRLQLLSSVIHGTLNFWMSAFILPKGCIKKVESLCRNFLWNG 840
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
R V WS V EEGGL +++L N ++ +W L ++W W+++
Sbjct: 841 DVTKRGSAKVAWSNVCLPKEEGGLGLRNLSFWNRTLCLKLIWRLFSASDSLWALWLRNTK 900
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
IKD FWA+ A + SSW + +L+ R R F+ NF D W P G + ++
Sbjct: 901 IKDGSFWAIDAKKQSSWTWKAMLNLRHTARHFLKARLGNGQQLNFWYDCWTPFGPLIDYL 960
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFN----EEDEHQFI 1170
P +G+ + KV W + + ++ L+ + E+D ++
Sbjct: 961 GPSGPNQVGIPLQGKVAHACSPTGWNLRPARSNQALDLHIFLATIQSPLLALEQDSFFWM 1020
Query: 1169 WRPSKTRKVFQRNMYRSV-PSHNPAPSWNGLVWFKHHIPRHSFIL 1038
P + + + + + P NP P W VWFK IPRH+F++
Sbjct: 1021 TGPVEFQMFSTKRTWEEIRPRQNPLP-WTSQVWFKGAIPRHAFMM 1064
Score = 45.4 bits (106), Expect(2) = 2e-32
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ T+++L SW + D C +C ET +HLF + +W + ++GY TW
Sbjct: 1071 RLPTKARLASWDSHIDATCCLCGCYQETRDHLFLHCKVSEDLWSEVTRRLGYRSFSFHTW 1130
Query: 840 DEVVHW 823
D W
Sbjct: 1131 DAFTSW 1136
>ref|XP_013650374.1| PREDICTED: uncharacterized protein LOC106354876 [Brassica napus]
Length = 738
Score = 114 bits (286), Expect(2) = 2e-32
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Frame = -2
Query: 1778 FCASFFVLLKRAIKELNSKFKGFFWDGPEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTN 1599
F + F+L K I ++ F W G G+Y V W V E GGL +++L + N
Sbjct: 338 FWSGAFILPKECINLIDKMCNAFLWKGTLEGKYVARVAWEKVSTPKEIGGLGLRNLMLWN 397
Query: 1598 TRANMRHVWDLVPEKRTIWKKWIKSNLIKDQDFWALRAPQNSSWWRRRILDHRKLTRQFI 1419
++ +W L+ ++W W++ N+IKD+ FW L+ QN +W ++IL+ R+ ++I
Sbjct: 398 RTCTIKLLWLLLFRPESVWTAWMQDNVIKDESFWMLKPRQNHTWIFKKILEERQTVIKWI 457
Query: 1418 XXXXXXXXXXNFTSDNWKPKGTVDTWINPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYA 1239
NF D W G + ++I P+ G+ + + V D NGEW F +
Sbjct: 458 RIEPGNGSNINFWLDPWTQFGQLISFIGPQGPRQSGIPLASTVTDLWINGEWSFRHARSP 517
Query: 1238 RVVEAIQQLSYDEFNEEDEH-QFIWRPSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHH 1062
++ E + L+ ++ + Q++ + +Y S + W+ L+W K
Sbjct: 518 QMEELLIHLTTVRLTDQPSNIQWVMDGAPKLTFSSSAVYNSFFEQSQIVPWHPLIWIKKG 577
Query: 1061 IPRHS 1047
IP+H+
Sbjct: 578 IPKHN 582
Score = 54.7 bits (130), Expect(2) = 2e-32
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = -1
Query: 1011 TRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTWDEV 832
TR +LL+WG D +C++C +E+ NHL+ + PF+S IW +++ + S W +V
Sbjct: 595 TRDRLLAWGLQTDSSCLLCNLSNESRNHLYFECPFSSAIWTYYAIRLQIIHTTNS-WGDV 653
Query: 831 VH 826
H
Sbjct: 654 AH 655
>ref|XP_010495447.1| PREDICTED: uncharacterized protein LOC104772543 [Camelina sativa]
Length = 1066
Score = 127 bits (320), Expect(2) = 3e-32
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 3/281 (1%)
Frame = -2
Query: 1874 KVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGP 1695
+V +I W +K L+F RL+L+ V++ ++ F S F+L K I+++N+ F W G
Sbjct: 614 QVKGKINNWCSKSLSFAGRLVLINTVIAGISNFWCSTFLLPKACIRKINTMCSSFLWKGH 673
Query: 1694 EMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLI 1515
GR++ V W + ++GGL ++DL NT ++ +W L +W W + + +
Sbjct: 674 CEGRHNARVSWDNITKPKDQGGLGIRDLATWNTACVLKLIWLLFFRSGLVWVAWYRLHFL 733
Query: 1514 KD--QDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTW 1341
+ FW ++ N SW ++L + + +I F SDNW P G + T+
Sbjct: 734 RGSLSSFWTMKKRPNFSWLANKLLKVKDMAYNWIKLRVGNGITCRFWSDNWSPFGNLSTF 793
Query: 1340 INPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNEEDEH-QFIWR 1164
++ LG+ + ++ W P+ V L+ +EE++H ++ +
Sbjct: 794 LS---TTRLGICATATLAQVYNHDNWRLPNPRSDNQVSLHAHLTTLHLSEEEDHYEWEMQ 850
Query: 1163 PSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
+K R +Y + + + W VW K IPRHSF+
Sbjct: 851 GKIYQKYSTRRVYDCIVNQSALVPWRRAVWNKGGIPRHSFL 891
Score = 41.2 bits (95), Expect(2) = 3e-32
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIW 892
+ +TR++LL WG D C++C S E+ NHLF + ++ +W
Sbjct: 899 RCRTRARLLGWGFQTDPRCLLCNSCDESWNHLFFNCHYSWSVW 941
>ref|XP_009109959.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 662
Score = 117 bits (293), Expect(2) = 3e-32
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 4/287 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
+++ A +W K L+F RL LLK V+ + F S F+L K IK + S F W G
Sbjct: 234 NRISACFHSWSAKLLSFAGRLQLLKTVIFGIVNFWTSAFILPKGCIKSIESLCSRFLWSG 293
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
+ + WS V EGGL ++ V N ++ +W L+ + ++W W
Sbjct: 294 SLEKKGIAKIAWSTVCLPKNEGGLGLRSFLVWNQVLCLKFIWILLSKSPSLWADWHWHIH 353
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
+ ++ FW + A N SW +RIL R L QF +F DNW P G + I
Sbjct: 354 LTNKSFWNIEAASNDSWAWKRILKLRPLALQFCKMSLGNGQLASFWYDNWSPLGQLINHI 413
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEF----NEEDEHQFI 1170
P +L + + V D + N W P A+ VE L+ + +D ++++
Sbjct: 414 GPLGPRTLRIRSNAVVADAIVNSTWSLPHPRSAQEVELHAHLTTIPLPLHTDIDDTYEWV 473
Query: 1169 WRPSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFILCPA 1029
S + + + W +VWFK +P+H+F + A
Sbjct: 474 AGDSPGCGFIASTTWEVLRPRDQVKDWVDVVWFKGSVPKHAFTMWTA 520
Score = 51.6 bits (122), Expect(2) = 3e-32
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ TR +L +WG C +CA G+ET +HL ++ +WR + ++ + +TW
Sbjct: 524 RLPTRERLAAWGMPIATTCPLCARGNETRDHLLLSCEYSLQVWREVFIRCTAPSTMFTTW 583
Query: 840 DEVVHW--CVGAFKVRL------------VWKSLRNLFSMLIFLP 748
E++ W G+ +++L +WK NL + +P
Sbjct: 584 SELLSWIRAAGSKELKLLRKVATQAFVFHIWKQRNNLVHNQLSIP 628
>ref|XP_009144152.1| PREDICTED: uncharacterized protein LOC103867818 [Brassica rapa]
Length = 1717
Score = 125 bits (314), Expect(2) = 7e-32
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 4/284 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
+K+ A +W K L+F RL LLK V+S + F S F+L K IK + S F W G
Sbjct: 1289 NKISACFNSWSAKMLSFAGRLQLLKTVISGIIIFWCSAFILPKGCIKSIESLCSRFLWSG 1348
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
+ + + WS V +EGGL ++ V N ++ +W L+ + ++W +W +
Sbjct: 1349 SIVRKGIAKISWSTVCLPKQEGGLGLRSFLVWNQVLCLKFIWILLSKTHSLWSEWHRHIH 1408
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
+ ++ FW + N SW RR+L R L F +F D+W P G + I
Sbjct: 1409 LPNKCFWTIAPASNDSWMWRRLLKLRPLALHFCKVSLGNGREASFWYDSWSPMGQLIEHI 1468
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDE--FNEEDEHQFIW- 1167
P+ +L + + V D + + W P A+ VE L+ + ++ ++W
Sbjct: 1469 GPQGPRNLRIRHNAVVADAIIDDHWALPHPRSAQEVELHAHLTTVSLPLPTDIDYDYVWI 1528
Query: 1166 -RPSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFIL 1038
S R+ + + A W +VWFK +P+H+F +
Sbjct: 1529 AGDSPVREFRAATTWEVMRPREQAKDWVDVVWFKGAVPKHAFTM 1572
Score = 42.0 bits (97), Expect(2) = 7e-32
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ TR +L+SWG C +C+ ET +H+ +++ +W+ + ++ + +TW
Sbjct: 1579 RLPTRERLVSWGMHIAITCPLCSRVPETRDHMLLSCDYSTDVWKEVFIRCLPPSTILTTW 1638
Query: 840 DEVVHW 823
E++ W
Sbjct: 1639 AELLSW 1644
>ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 660
Score = 115 bits (288), Expect(2) = 7e-32
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 8/287 (2%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
DKV RI +W + L+F RL LL+ V+ + F A+ F L + ++EL F W G
Sbjct: 214 DKVRQRISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFLWSG 273
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
V W V E GGL +K L N ++ +W L ++W WIKS+L
Sbjct: 274 APNSAKGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHL 333
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKG---TVD 1347
++ + FW SW R ++ R+ R FI +F DNW G +V
Sbjct: 334 MEGKMFWVSDFANKGSWIWRNLMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLSVT 393
Query: 1346 TWINPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARV--VEAIQQLSYDEFNEEDEHQF 1173
+ P+ G++I V V W S + + A + + + F
Sbjct: 394 GTLGPQY---SGISIDASVHSVVTESGWNVSRSRNPTLTALRAALPAQTPDIDSVEVDYF 450
Query: 1172 IWRPS---KTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
+WR S + +++++ P +W +VWFK+ IP+H+FI
Sbjct: 451 VWRNSVSAQPSNFSTTTLWKTLHPDPPVVNWVSIVWFKNRIPKHAFI 497
Score = 52.0 bits (123), Expect(2) = 7e-32
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
+M TR KL WG C++C + ET +HLF + PF+ +W GL+ G V L
Sbjct: 505 RMSTRDKLRHWGLHVPAECLLCGAADETTSHLFFECPFSQEVWSGLMAGTGLV--LSYKL 562
Query: 840 DEVVHW 823
+++V W
Sbjct: 563 EDMVVW 568
>ref|XP_013674535.1| PREDICTED: uncharacterized protein LOC106379058 [Brassica napus]
Length = 1716
Score = 120 bits (300), Expect(2) = 1e-31
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 6/284 (2%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVL-SCMNFFCASFFVLLKRAIKELNSKFKGFFWD 1701
D++ R +W ++ L++ R LL V+ +NF+ +SF +L K IK + S F W+
Sbjct: 1286 DQLKRRFSSWSSRALSYAGRRQLLSTVIFGTLNFWFSSF-ILPKGCIKAIESLCSRFLWN 1344
Query: 1700 GPEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSN 1521
G R + W V EGGL ++DL N +++ +W L E ++W W K+N
Sbjct: 1345 GNITSRSKAKISWKSVCLPQSEGGLGLRDLTTWNQTLSLKLIWLLHCEDESLWASWTKTN 1404
Query: 1520 LIKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTW 1341
+K + W++ A + SW + IL R L+ +FI +F DNW P G + +
Sbjct: 1405 RLKGESIWSIDAEKQRSWIWKSILHLRPLSERFIRCEVGNGTSASFWFDNWLPLGPLIKF 1464
Query: 1340 INPEVLVSLGVTIHNKVVDFVDNGEWVF-----PDSMYARVVEAIQQLSYDEFNEEDEHQ 1176
+GV +H K+ + N W+ P + +++ L D ++
Sbjct: 1465 FGYNGPQHIGVPLHAKIREICPNEGWLLRPARSPKAEQLQILLCTLPLPARSL-APDVYK 1523
Query: 1175 FIWRPSKTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSF 1044
+ K + ++ + W LVWFK HIPRH+F
Sbjct: 1524 WCVNDLSLAKFTTSLTWEAIRNRGEQAVWAPLVWFKGHIPRHAF 1567
Score = 46.6 bits (109), Expect(2) = 1e-31
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ TR++L +W D +C++C ET +HLF F+ +W + ++GY L TW
Sbjct: 1576 RLPTRARLATWDPGIDASCLLCVGCVETRDHLFLRCSFSEQVWHLITKRLGYRPTLFHTW 1635
Query: 840 DEVVHW 823
W
Sbjct: 1636 TAFGDW 1641
>ref|XP_009114688.1| PREDICTED: uncharacterized protein LOC103839958 [Brassica rapa]
Length = 688
Score = 115 bits (287), Expect(2) = 1e-31
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 7/286 (2%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
DK+ AR R+W K L+F R L++ V+ F AS F++ + L F W+G
Sbjct: 250 DKIEARFRSWTVKHLSFAGRFQLIQAVIYSTISFWASIFIIPPECVSILERMCNAFLWNG 309
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
+ W V E GGL +K + N ++ +W L ++W W++ NL
Sbjct: 310 APNSARGAKIAWESVCTPKEAGGLGLKRIADWNKVLGLKLIWLLFTAGGSLWVSWVRRNL 369
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWI 1338
+ +++FW L + SW R I R L R + +F DNW +G + +
Sbjct: 370 MGEENFWLLNPARRGSWIWRSICKMRTLARPMVVCEVGSGTSASFWQDNWTSRGPLIELV 429
Query: 1337 NPEVLVSLGVTIHNKVVDFVDNGEWVFPDS-MYARVVEAIQQL---SYDEFNEEDEHQFI 1170
G++I V D + G W S + ++ I++ + + + E + QF
Sbjct: 430 GDRGPQVTGLSISAVVADGLTGGGWWLDRSRSRSPIITLIRECLPNAQEILDSEVDDQFG 489
Query: 1169 WRPSKTRKVFQRNMYRSVPSHNPAPS---WNGLVWFKHHIPRHSFI 1041
W P R + + PAP+ W+ VWF IP+H+FI
Sbjct: 490 WYPVPGRGTGIFSASETWRVLFPAPTEVFWHESVWFAGRIPKHAFI 535
Score = 51.6 bits (122), Expect(2) = 1e-31
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
+M TR KL+ WG + C++C+ +E+ HLF D +++ +W + ++ V ++
Sbjct: 543 RMVTRDKLIRWGLTVPETCVLCSGHNESRQHLFFDCAYSNQVWSFFISRLNLVS--PQSF 600
Query: 840 DEVVHW 823
DEV+ W
Sbjct: 601 DEVLRW 606
>ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 658
Score = 115 bits (288), Expect(2) = 2e-31
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 8/287 (2%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDG 1698
DKV RI +W + L+F RL LL+ V+ + F A+ F L + ++EL F W G
Sbjct: 246 DKVRQRISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFLWSG 305
Query: 1697 PEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNL 1518
V W V E GGL +K L N ++ +W L ++W WIKS+L
Sbjct: 306 APNSAKGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHL 365
Query: 1517 IKDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKG---TVD 1347
++ + FW SW R ++ R+ R FI +F DNW G +V
Sbjct: 366 MEGKMFWVSDFANKGSWIWRNLMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLSVT 425
Query: 1346 TWINPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARV--VEAIQQLSYDEFNEEDEHQF 1173
+ P+ G++I V V W S + + A + + + F
Sbjct: 426 GTLGPQY---SGISIDASVHSVVTESGWNVSRSRNPTLTALRAALPAQTPDIDSVEVDYF 482
Query: 1172 IWRPS---KTRKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFI 1041
+WR S + +++++ P +W +VWFK+ IP+H+FI
Sbjct: 483 VWRNSVSAQPSNFSTTTLWKTLHPDPPVVNWVSIVWFKNRIPKHAFI 529
Score = 50.8 bits (120), Expect(2) = 2e-31
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYV 862
+M TR KL WG C++C + ET +HLF + PF+ +W GL+ G V
Sbjct: 537 RMSTRDKLRHWGLHVPAECLLCGAADETTSHLFFECPFSQEVWSGLMAGTGLV 589
>ref|XP_009126318.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 545
Score = 125 bits (313), Expect(2) = 2e-31
Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Frame = -2
Query: 1877 DKVVARIRTWKTKFLTFDVRLILLKFVL-SCMNFFCASFFVLLKRAIKELNSKFKGFFWD 1701
+K+ RI +W +FL++ RL L+ V+ S +NF+ A+F L I+E+ F W
Sbjct: 115 EKIRKRIGSWTGRFLSYAGRLQLINSVIMSLVNFWMAAFR-LPSGCIQEIERICSAFLWS 173
Query: 1700 GPEMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSN 1521
G EM + W V T +EGGL ++ L+ N ++ +W ++ K ++W W+K
Sbjct: 174 GVEMNSRKTKISWKEVCRTKQEGGLGIRSLKEMNVVCILKLIWRILAAK-SLWVSWVKMY 232
Query: 1520 LIKDQDFWALR-APQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDT 1344
LI+ FW+++ Q SW R+IL +R+ ++ +F D W P G +
Sbjct: 233 LIRKGSFWSIKDTSQLGSWTWRKILKYREKAKELYRVEVRNGERASFWYDKWSPLGCLKD 292
Query: 1343 WINPEVLVSLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEFNEEDEHQFIWR 1164
+ + +G+T + KV D + + RV + I++ + + +++E ++WR
Sbjct: 293 LLGNGGCIDMGLTENAKVADCRCHRRKNHRFMILNRVEQEIEKFKVN-WRQDEEDVYLWR 351
Query: 1163 PSKTR---KVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFILCPALHKK 1017
+ K ++ + + W+ VWFKH P++SF++ AL +
Sbjct: 352 SGNNKFKEKFSTAETWQQIREQHQQYDWHKAVWFKHATPKYSFVVWVALRDR 403
Score = 41.2 bits (95), Expect(2) = 2e-31
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKE-LEST 844
++ T S++ W A D +CI C ET +HLF + ++ IW L G +++ S+
Sbjct: 403 RLSTGSRMAQWSASVDTSCIFCQVPAETVDHLFLECSYSKQIWE--KLARGVLRDRFTSS 460
Query: 843 WDEVVHWCVGAFKVRLVWKSLRNLFSMLI 757
W ++ V + +++ ++R +F +
Sbjct: 461 WSDIRRIIVDEDQEKMLLFTIRYVFQTAV 489
>ref|XP_009119465.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 444
Score = 130 bits (328), Expect(2) = 2e-31
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Frame = -2
Query: 1874 KVVARIRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGP 1695
K+ R ++W +K L+F RL+L+K V++ F S F L K +++++S F W G
Sbjct: 12 KIKGRFQSWTSKTLSFAGRLMLIKSVIASTTNFWCSAFCLPKACMEDIDSLCSAFLWSGS 71
Query: 1694 EMGRYHCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLI 1515
V W+ V F+EGGL ++ + + +++ +W L+ E ++W W+K ++
Sbjct: 72 PNDSSKAKVSWTEVCKPFKEGGLGIRSIADVSKVFSLKLIWRLLSESHSLWVDWMKKYIL 131
Query: 1514 KDQDFWALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWIN 1335
+++ FW +R SW R++L R L ++F+ F +D W P+G +
Sbjct: 132 RNESFWDVRDTGLGSWVWRKLLKLRHLAKEFVHIEVHNGQTARFWTDLWHPRGRLIEIAG 191
Query: 1334 PEVLVSLGVTIHNKVVDF-VDNGEWVFPDSMYARVVEAIQQLSYD--EFNEEDEHQFIWR 1164
LG+ + D G W F ++ E I + E N + +WR
Sbjct: 192 ETGTQKLGIDRAALISDVRTAEGVWRFRRCRDRQMREIINMIENHQMEVNHQAPDVVMWR 251
Query: 1163 PSKT---RKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFILCPALHKK 1017
++T R+ F ++ + +H+ W+ +VWF+ +PR +FI A+ +
Sbjct: 252 KNETEYCRQFFTAETWQRIRTHDGLKEWSKVVWFQLGVPRFAFITWLAIRNR 303
Score = 35.4 bits (80), Expect(2) = 2e-31
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWR---GLLLKMGYVKELE 850
++ T + +WG Q C+ C +ET +HLF P+ +W G LL + E
Sbjct: 303 RLSTGERTGAWG--QPQGCLFCGEPNETRDHLFFACPYTYTLWLEVVGTLLGRPPDPDWE 360
Query: 849 STWDEVVHWCVGAFKVRLVWKSLRNLFSMLIFL 751
ST + + G RL + +R +F I++
Sbjct: 361 STLELLTTHSYG----RLEYLLVRLVFQAAIYI 389
>ref|XP_009129000.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 423
Score = 119 bits (299), Expect(2) = 2e-31
Identities = 78/281 (27%), Positives = 120/281 (42%), Gaps = 4/281 (1%)
Frame = -2
Query: 1859 IRTWKTKFLTFDVRLILLKFVLSCMNFFCASFFVLLKRAIKELNSKFKGFFWDGPEMGRY 1680
+R W K L+F RL LL+ V+ F AS ++L K +K + S F W G +
Sbjct: 1 MRAWAVKLLSFAGRLQLLRTVIFGTINFWASAYMLPKGCVKAIESLCAKFLWSGNIDKKA 60
Query: 1679 HCPVGWSYVFHTFEEGGLSVKDLEVTNTRANMRHVWDLVPEKRTIWKKWIKSNLIKDQDF 1500
+GW+ + +EGGL ++ L V N ++ +W L+ ++W W +S + F
Sbjct: 61 IAKIGWTTICLPKQEGGLGIRSLTVWNKVQCLKFIWILLTSSTSLWADWHRSVHLSTSSF 120
Query: 1499 WALRAPQNSSWWRRRILDHRKLTRQFIXXXXXXXXXXNFTSDNWKPKGTVDTWINPEVLV 1320
W L Q SW +R+L R L QF +F D W P G + +I P
Sbjct: 121 WTLSIDQADSWAWKRLLKLRPLAAQFCRSLVGNGQTTSFWWDVWTPLGQLIDFIGPSGPR 180
Query: 1319 SLGVTIHNKVVDFVDNGEWVFPDSMYARVVEAIQQLSYDEF----NEEDEHQFIWRPSKT 1152
+L + KV D + N W P R VE L+ N +D + ++ S
Sbjct: 181 ALRLHQDAKVADAIHNTGWTLPHPRSQREVELHAHLTTITLPLPNNIDDSYIWVAGNSPL 240
Query: 1151 RKVFQRNMYRSVPSHNPAPSWNGLVWFKHHIPRHSFILCPA 1029
+ + W +VWFK HIP+H+F + A
Sbjct: 241 TVFSSAATWEVMRPRQDEKDWFDVVWFKGHIPKHAFTMWTA 281
Score = 46.6 bits (109), Expect(2) = 2e-31
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -1
Query: 1020 KMKTRSKLLSWGAIQDDACIMCASGHETENHLFHDFPFASIIWRGLLLKMGYVKELESTW 841
++ TRS+L +WG C +C+ ET +HL F++ IWR + + TW
Sbjct: 285 RLPTRSRLAAWGMTIAPDCALCSGAVETRDHLLFTCAFSATIWREVFRRCQAPSSAFITW 344
Query: 840 DEVVHW 823
E++ W
Sbjct: 345 AELLSW 350