BLASTX nr result
ID: Papaver30_contig00018885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00018885
(423 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub... 78 2e-12
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 2e-11
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub... 74 4e-11
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial... 74 4e-11
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub... 74 4e-11
ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 67 1e-09
gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Ambore... 67 1e-09
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub... 67 7e-09
gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri] 67 7e-09
gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum dem... 67 7e-09
ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 3e-08
ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 3e-08
ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 3e-08
ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 3e-08
emb|CDX72007.1| BnaC08g28670D [Brassica napus] 64 3e-08
emb|CDY06084.1| BnaA09g36960D [Brassica napus] 64 3e-08
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 4e-08
ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I sub... 64 6e-08
emb|CDX67702.1| BnaA07g17420D [Brassica napus] 64 6e-08
gb|KKA03263.1| DNA-directed RNA polymerase I subunit [Hanseniasp... 63 1e-07
>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
acuminata subsp. malaccensis]
Length = 1640
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -2
Query: 359 DALLMKFNIY*GHARAS*REN-TSSLLKKQRASL-QLRKKDFLKLMKLKYFISLAHPGEL 186
D L K N Y S R+N T +LKKQ++S Q+ KKDF+KLMKLKY SLA PGE
Sbjct: 1063 DTSLAKSNAYIRELPCSLRDNATDFVLKKQKSSPHQINKKDFMKLMKLKYLSSLAEPGEA 1122
Query: 185 VGVLAAESVVEPSSEMTSDTF 123
VGV+AA+SV EPS++MT +TF
Sbjct: 1123 VGVVAAQSVGEPSTQMTLNTF 1143
>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
guineensis]
Length = 1674
Score = 75.1 bits (183), Expect = 2e-11
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 231
Q +++ L EDA L K N Y REN ++ L K + SL Q+R+KD +KL
Sbjct: 1072 QTVVLDRLSSQLEDAHLSKSNGYLKELPYLLRENATTFARLSKNHQGSLRQIRRKDLMKL 1131
Query: 230 MKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
MKLKY SLA PGE VGV+AA+SV EPS++MT +TF
Sbjct: 1132 MKLKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTF 1167
>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
acuminata subsp. malaccensis]
Length = 1641
Score = 73.9 bits (180), Expect = 4e-11
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTSSLLKKQRASL--QLRKKDFLKLMK 225
Q++++ D L K N Y S R+ + + K + S Q+ +KDF+KLMK
Sbjct: 1046 QKVVLQKFSDQISDTSLAKSNAYIRELPCSLRDKATDFILKNQKSFPHQINQKDFMKLMK 1105
Query: 224 LKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
LKY SLA PGE VGV+AA+SV EPS++MT +TF
Sbjct: 1106 LKYLSSLAEPGEAVGVVAAQSVGEPSTQMTLNTF 1139
>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
Length = 1669
Score = 73.9 bits (180), Expect = 4e-11
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 231
Q +++ L EDA L K N Y REN ++ L K + SL Q+R++D +KL
Sbjct: 1068 QTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTFARLSKNHQGSLHQIRRRDLMKL 1127
Query: 230 MKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
MKLKY SLA PGE VGV+AA+SV EPS++MT +TF
Sbjct: 1128 MKLKYMSSLAEPGEPVGVIAAQSVGEPSTQMTLNTF 1163
>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
dactylifera]
Length = 1665
Score = 73.9 bits (180), Expect = 4e-11
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTSS---LLKKQRASL-QLRKKDFLKL 231
Q +++ L EDA L K N Y REN ++ L K + SL Q+++KD +KL
Sbjct: 1062 QTVVLDRLSSQLEDAHLSKSNGYIKELPYLLRENATTFARLSKNHQGSLHQIKRKDLMKL 1121
Query: 230 MKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
MKLKY SLA PGE VGV+AA+SV EPS++MT +TF
Sbjct: 1122 MKLKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTF 1157
>ref|XP_011625527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
rpa1 [Amborella trichopoda]
Length = 1605
Score = 67.4 bits (163), Expect(2) = 1e-09
Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -2
Query: 287 LLKKQRASLQLRK-KDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
L KK+R SL LRK K F L+KLKYF SLA PGE VGV+AA+S+ EPS++MT +TF
Sbjct: 1040 LSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQPGEAVGVIAAQSIGEPSTQMTLNTF 1095
Score = 21.9 bits (45), Expect(2) = 1e-09
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = -3
Query: 418 SWKTD------DDKNYSCRLLV--VAAKMPS**NSIFIKDMPEPLEGKIHQ 290
SW T+ + K S RL V + +PS +S +IKD+P+ LE K+++
Sbjct: 986 SWLTEFKFLAANKKTLSARLGVHQLEDALPSEYDS-YIKDLPDALEEKMNK 1035
>gb|ERN11762.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 67.4 bits (163), Expect(2) = 1e-09
Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -2
Query: 287 LLKKQRASLQLRK-KDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
L KK+R SL LRK K F L+KLKYF SLA PGE VGV+AA+S+ EPS++MT +TF
Sbjct: 1035 LSKKKRDSLHLRKLKHFRNLLKLKYFSSLAQPGEAVGVIAAQSIGEPSTQMTLNTF 1090
Score = 21.9 bits (45), Expect(2) = 1e-09
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = -3
Query: 418 SWKTD------DDKNYSCRLLV--VAAKMPS**NSIFIKDMPEPLEGKIHQ 290
SW T+ + K S RL V + +PS +S +IKD+P+ LE K+++
Sbjct: 981 SWLTEFKFLAANKKTLSARLGVHQLEDALPSEYDS-YIKDLPDALEEKMNK 1030
>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
nucifera]
Length = 1676
Score = 66.6 bits (161), Expect = 7e-09
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -2
Query: 305 RENTSSLLKKQRASLQLRK-KDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSD 129
++ +L KK+ SL LRK KDF+KLM+ KY SLA PGE VGV+AA+SV EPS++MT +
Sbjct: 1122 KDYIDTLSKKKLKSLNLRKRKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPSTQMTLN 1181
Query: 128 TF 123
TF
Sbjct: 1182 TF 1183
>gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]
Length = 539
Score = 66.6 bits (161), Expect = 7e-09
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTS----SLLKKQRASLQLRK-KDFLK 234
Q +++ L G EDA L K + Y + SL KK+R SL LRK K+F+
Sbjct: 451 QNIVLEKLSGQLEDAHLSKSDAYIKELPNALERKAKDFFCSLTKKKRHSLHLRKQKNFMN 510
Query: 233 LMKLKYFISLAHPGELVGVLAAESVVEPS 147
LMKLKY SLA PGE VGV+AA+SV EPS
Sbjct: 511 LMKLKYLSSLAQPGEAVGVIAAQSVGEPS 539
>gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum demersum]
Length = 538
Score = 66.6 bits (161), Expect = 7e-09
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = -2
Query: 398 QELLMSTLGGGCEDALLMKFNIY*GHARAS*RENTSSLL----KKQRASLQLRKKDFLKL 231
Q+++ L G +DA L F+ Y G + E L K++R SL L KK F+KL
Sbjct: 451 QDVVQEKLCGKNKDARLHHFHGYLGAFPSGLEEKAKDYLNGLSKEKRTSLGLSKKGFMKL 510
Query: 230 MKLKYFISLAHPGELVGVLAAESVVEPS 147
MKLKY SLA PGE VG++AA+SV EPS
Sbjct: 511 MKLKYLTSLAQPGEPVGIIAAQSVGEPS 538
>ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like isoform X1
[Brassica napus] gi|923714914|ref|XP_013663558.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa1-like isoform X2 [Brassica napus]
gi|923714919|ref|XP_013663559.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa1-like isoform X3 [Brassica
napus]
Length = 1643
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Brassica
napus]
Length = 1643
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica
oleracea var. oleracea]
Length = 1643
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica rapa]
Length = 1640
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>emb|CDX72007.1| BnaC08g28670D [Brassica napus]
Length = 1535
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>emb|CDY06084.1| BnaA09g36960D [Brassica napus]
Length = 1521
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -2
Query: 284 LKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+K++ AS +R++D LKL+K K+F SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1094 MKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1147
>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
hassleriana]
Length = 1671
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = -2
Query: 365 CEDALLMKFNIY*GHARAS*RENTSSLLK----KQRASLQLRKKDFLKLMKLKYFISLAH 198
C + +L + N Y + ++ ++ K+R + +L K++ LKL+K KYF SLA
Sbjct: 1093 CSEDMLSESNCYITDLPVTLKKQAEKFVEALPLKERIASKLVKEELLKLVKPKYFASLAQ 1152
Query: 197 PGELVGVLAAESVVEPSSEMTSDTF 123
PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1153 PGEPVGVLAAQSVGEPSTQMTLNTF 1177
>ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Brassica
rapa]
Length = 1625
Score = 63.5 bits (153), Expect = 6e-08
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -2
Query: 269 ASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
AS +R++D LKL+K KYF SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1090 ASKMVRQEDLLKLVKSKYFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1138
>emb|CDX67702.1| BnaA07g17420D [Brassica napus]
Length = 1509
Score = 63.5 bits (153), Expect = 6e-08
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -2
Query: 269 ASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
AS +R++D LKL+K KYF SLA PGE VGVLAA+SV EPS++MT +TF
Sbjct: 1069 ASKMVRQEDLLKLVKSKYFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1117
>gb|KKA03263.1| DNA-directed RNA polymerase I subunit [Hanseniaspora uvarum DSM 2768]
Length = 1648
Score = 62.8 bits (151), Expect = 1e-07
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = -2
Query: 302 ENTSSLLKKQRASLQLRKKDFLKLMKLKYFISLAHPGELVGVLAAESVVEPSSEMTSDTF 123
+N +L KK + L +K F LM+LKY SL HPGE VG++AA+SV EPS++MT +TF
Sbjct: 1129 DNNGALFKKAKKINGLTEKKFKALMQLKYMRSLIHPGEAVGIIAAQSVGEPSTQMTLNTF 1188