BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00015774
         (2139 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  243   1e-65
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   255   1e-64
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              236   9e-64
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   237   9e-64
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   234   1e-63
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  234   1e-63
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...   250   3e-63
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   238   3e-63
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...   239   4e-63
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   249   9e-63
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   247   3e-62
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431...   236   5e-62
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    230   6e-62
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]                    230   6e-62
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    229   8e-62
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    229   8e-62
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                    229   8e-62
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...   229   8e-62
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    229   8e-62
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops...   229   8e-62

>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  243 bits (619), Expect(2) = 1e-65
 Identities = 122/258 (47%), Positives = 157/258 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C+AC E KS + P+  ST V   PL+L+ SDV GPAP    ++ +YY+ F++ FS+FTWI
Sbjct: 491  CNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKFTWI 549

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              +  KS+V   F  F   VE +F+ KI   Q+D GGEY K   F    G  H  SCPH 
Sbjct: 550  YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHT 609

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
              QNG  ER+HRH++E G            FW +AF  AT+L+N++ S    + +P E L
Sbjct: 610  HQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKL 669

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + PDYLSLR FGC C+P LRPY+  KL  RS  C FL +  HHKG+KCL + +GRVY 
Sbjct: 670  FNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYI 729

Query: 1216 SRDVVFVEEKFPVSTSHA 1163
            SRDVVF E  FP ST H+
Sbjct: 730  SRDVVFDENIFPFSTLHS 747



 Score = 37.7 bits (86), Expect(2) = 1e-65
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTL-----QHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D++T ++ L+G+ R GLY +     +  + +AL     S+   H RL HP L  ++ V+ 
Sbjct: 416  DQVTKDILLEGRCRHGLYPIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVIS 475

Query: 1974 HHCLPVS 1954
             + LP S
Sbjct: 476  KNNLPCS 482



 Score = 79.7 bits (195), Expect = 1e-11
 Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
 Frame = -1

Query: 303  KHAKITDNLFELSCYS---------QAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXX 151
            K    TD   +  C++         +A  D  W+  M+ E  AL+KN T           
Sbjct: 908  KEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKAAMEAEYDALIKNDTWHLVPYEKGQN 967

Query: 150  XIGCKWVYRVKRRADGTVER---RLVAKGFNQQEGIDYGETFGPV 25
             IGCKWVY++KR+ADGT++R   RLVAKGF Q+ GIDY +TF PV
Sbjct: 968  VIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPV 1012


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  255 bits (651), Expect = 1e-64
 Identities = 124/262 (47%), Positives = 162/262 (61%), Gaps = 2/262 (0%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C  C   KS + PF  S     HPLD I  D+ GP+P+ SN+  +YY +FV+ +SR++W 
Sbjct: 488  CEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWF 547

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEY--NKFAKFLQANGTHHRFSCP 1583
             P+H KS+ LS+FI+F K VEN  NTKIKVFQSD GGE+  NK    L  +G HHR SCP
Sbjct: 548  YPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCP 607

Query: 1582 HASAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYE 1403
            +   QNGL ER+HRH+VE G            FW ++FF A +++N+L S    + SPYE
Sbjct: 608  YTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYE 667

Query: 1402 LLFKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRV 1223
             LF   PDY SLR FG  C+P LRP  + K D RS  C FL Y + +KGY+C + PTG+V
Sbjct: 668  ALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKV 727

Query: 1222 YWSRDVVFVEEKFPVSTSHAVL 1157
            Y SR+V+F E + P    +  L
Sbjct: 728  YISRNVIFNESELPFKEKYQSL 749



 Score = 63.9 bits (154), Expect = 6e-07
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = -1

Query: 369  SNHPMVTQGKDGIFKKKFVVASKHAKITD--NLFELSCYSQAKNDPKWRPHMDLEIYALL 196
            ++H M T+ K GI K      +++A IT   N  E    + A   P W   +  EI  + 
Sbjct: 829  NSHAMTTRSKAGIQKPN----TRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVH 884

Query: 195  KNGT*SXXXXXXXXXXIGCKWVYRVKRRADGTVER---RLVAKGFNQQEGIDYGETFGPV 25
               T S          +  KWV++ K   DG++++   RLVAKGF+Q+EG+DY ETF PV
Sbjct: 885  MLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPV 944


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  236 bits (601), Expect(2) = 9e-64
 Identities = 117/261 (44%), Positives = 161/261 (61%), Gaps = 2/261 (0%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS CL NKSHK PF S+T++   PL+ + SDV   +P+ S  +++YY++ V+ ++R+TW+
Sbjct: 593  CSHCLINKSHKLPFYSNTIISYTPLEYVYSDV-WTSPVTSVDNFKYYLILVDHYTRYTWL 651

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   F+ F   VEN F TKI+   SD+GGE+    +FL  +G  H  S PH 
Sbjct: 652  YPLKQKSQVRETFVAFKALVENRFQTKIRTLYSDNGGEFIALRQFLLTHGISHLTSLPHT 711

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NG+ ER+HRH++E+G           S+W  AF  A +L+N+L S    ++SPY  L
Sbjct: 712  PEHNGIAERKHRHILETGLTLLTQASIPTSYWTYAFGTAVYLINRLPSSVLNNESPYSKL 771

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            FK +P+YL LR FGC CFP LRPY   KL+ RS PC FL Y      Y CL   +GRVY 
Sbjct: 772  FKTSPNYLKLRVFGCSCFPWLRPYTNHKLERRSQPCVFLGYSLTQSAYLCLDRSSGRVYT 831

Query: 1216 SRDVVFVEEKFP--VSTSHAV 1160
            SR V FVE++FP  +S +H+V
Sbjct: 832  SRHVQFVEDQFPFSISDTHSV 852



 Score = 38.5 bits (88), Expect(2) = 9e-64
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYT--LQHVTPKALFGE---HASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY   +   TP +LF       ++ + H RL HP    ++S+V 
Sbjct: 518  DLSTGARLLQGRTKDELYEWPVPSNTPISLFASPTPKTTLPSWHSRLGHPSPPVLKSLVS 577

Query: 1974 HHCLPVSNS 1948
               LPVSNS
Sbjct: 578  QFSLPVSNS 586



 Score = 79.7 bits (195), Expect = 1e-11
 Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
 Frame = -1

Query: 384  PPPTTSNHPMVTQGKDGIFKKKFVVASKHAKITDNLFELSCYSQAKNDPKWRPHMDLEIY 205
            PPP T+NHPM T+ K+ I K K  ++     +       +  +QA  D KWR  M  EI 
Sbjct: 987  PPPPTNNHPMRTRAKNHITKPKTKLSLLAKTVQTRPQIPNTVNQALRDEKWRNAMGEEIN 1046

Query: 204  ALLKNGT*SXXXXXXXXXXIGCKWVYRVKRRADGTVER---RLVAKGFNQQEGIDYGETF 34
            A ++N T            I  KW++ +K   +GT++R   RLVA+GF QQ G+ Y ETF
Sbjct: 1047 AQIRNNTFELVPPKPNQNVISTKWIFTLKYLPNGTLDRYKARLVARGFRQQYGLHYSETF 1106

Query: 33   GPV 25
             PV
Sbjct: 1107 SPV 1109


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  237 bits (605), Expect(2) = 9e-64
 Identities = 122/258 (47%), Positives = 154/258 (59%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C+AC + KSH+ PF  S+ V  HPL+L+ SDV GPAP    +  +YY+ F++ FS+FTWI
Sbjct: 485  CNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPESVGRK-KYYVSFIDDFSKFTWI 543

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              +  KS V   F  F   VE  F+ KI   Q+D GGEY     F    G  H  SCPH 
Sbjct: 544  YLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHT 603

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
              QNG  ER+HRH+VE G            FW +AF +AT+L+N++ S    + SP E L
Sbjct: 604  HQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKL 663

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            FK+ PDY SLR FGC C+P LRPY+  KL  RS  C FL +   HKG+KCL + TGR+Y 
Sbjct: 664  FKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYI 723

Query: 1216 SRDVVFVEEKFPVSTSHA 1163
            SRDVVF E  FP +  HA
Sbjct: 724  SRDVVFDENIFPFTELHA 741



 Score = 37.0 bits (84), Expect(2) = 9e-64
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTPKALFGE-HASIQT*HQRLVHPMLRTIQSVVRHHCL 1963
            D+IT +  L+G+    LY L H + K  +     S+   H RL HP + T++ VV    L
Sbjct: 415  DQITRKTLLKGRSWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSL 474

Query: 1962 PVSN 1951
            P S+
Sbjct: 475  PCSD 478



 Score = 79.3 bits (194), Expect = 1e-11
 Identities = 71/215 (33%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
 Frame = -1

Query: 648  SCTHVARTNPTVPGNTTGHRKSAVNDMSASDSVPVPRMPATPDDHRLQSTSLTPSTVHDM 469
            + T   R     PG+      S++ + +A DSV            + Q  S +P+  H  
Sbjct: 830  AATSSGRHPGPTPGSVPRGAASSLAEETAEDSVSQAVQEQESQVVQEQEQS-SPAQEHAQ 888

Query: 468  SAGDLLQSNLFRTA-VTHLSNEQLVYSALPPPTTSNHPMVTQGK---DGIFKKKFVVASK 301
            +  D  ++N  + A VT   +E     A   P T     V + K   DG  K K    + 
Sbjct: 889  AVTD--ETNTLQHADVTDTGSE-----APAGPRTRLQSGVRKEKVYTDGTIKYKHSWFTA 941

Query: 300  HAKITDNLFELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXIGCKWVYRV 121
              + T++L       +A  D  W+  MD E  AL+KN T            IGCKWVY++
Sbjct: 942  SGEPTNDL-------EALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKI 994

Query: 120  KRRADGTVER---RLVAKGFNQQEGIDYGETFGPV 25
            KR+ADGT++R   RLVAKGF Q+ GIDY +TF PV
Sbjct: 995  KRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPV 1029


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  234 bits (597), Expect(2) = 1e-63
 Identities = 118/258 (45%), Positives = 154/258 (59%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C+AC E KSH+ P+  ST V   PL+L+ SDV GPAP    ++ +YY+ F++ FS+FTWI
Sbjct: 494  CNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKFTWI 552

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              +  KS+V   F  F   VE +F+ KI   Q+D GGEY K   F    G  H  SCPH 
Sbjct: 553  YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHT 612

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
              QNG  ER+H+H++E G            FW +AF  AT+L+N++ S    + +P E L
Sbjct: 613  HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKL 672

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + PDY SLR F C C+P L PY+  KL  RS  C FL +  HHKG+K L + +GRVY 
Sbjct: 673  FNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYI 732

Query: 1216 SRDVVFVEEKFPVSTSHA 1163
            SRDVVF E  FP ST H+
Sbjct: 733  SRDVVFDENVFPFSTLHS 750



 Score = 39.3 bits (90), Expect(2) = 1e-63
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTL-----QHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D++T +V L+G+ R GLY +     +    +AL     S+   H RL HP L  ++ V+ 
Sbjct: 419  DQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVIS 478

Query: 1974 HHCLPVS 1954
             + LP S
Sbjct: 479  RNNLPCS 485



 Score = 80.5 bits (197), Expect = 6e-12
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
 Frame = -1

Query: 303  KHAKITDNLFELSCYS---------QAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXX 151
            K    T+   +  C+S         +A  D  WR  M+ E  AL+KN T           
Sbjct: 920  KEKVYTNGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQN 979

Query: 150  XIGCKWVYRVKRRADGTVER---RLVAKGFNQQEGIDYGETFGPV 25
             IGCKWVY+VKR+ADGT++R   RL+AKGF Q+ GIDY +TF PV
Sbjct: 980  IIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPV 1024


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  234 bits (597), Expect(2) = 1e-63
 Identities = 118/258 (45%), Positives = 154/258 (59%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C+AC E KSH+ P+  ST V   PL+L+ SDV GPAP    ++ +YY+ F++ FS+FTWI
Sbjct: 494  CNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFSKFTWI 552

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              +  KS+V   F  F   VE +F+ KI   Q+D GGEY K   F    G  H  SCPH 
Sbjct: 553  YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHT 612

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
              QNG  ER+H+H++E G            FW +AF  AT+L+N++ S    + +P E L
Sbjct: 613  HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKL 672

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + PDY SLR F C C+P L PY+  KL  RS  C FL +  HHKG+K L + +GRVY 
Sbjct: 673  FNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYI 732

Query: 1216 SRDVVFVEEKFPVSTSHA 1163
            SRDVVF E  FP ST H+
Sbjct: 733  SRDVVFDENVFPFSTLHS 750



 Score = 39.3 bits (90), Expect(2) = 1e-63
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTL-----QHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D++T +V L+G+ R GLY +     +    +AL     S+   H RL HP L  ++ V+ 
Sbjct: 419  DQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVIS 478

Query: 1974 HHCLPVS 1954
             + LP S
Sbjct: 479  RNNLPCS 485



 Score = 80.5 bits (197), Expect = 6e-12
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
 Frame = -1

Query: 303  KHAKITDNLFELSCYS---------QAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXX 151
            K    T+   +  C+S         +A  D  WR  M+ E  AL+KN T           
Sbjct: 920  KEKVYTNGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQN 979

Query: 150  XIGCKWVYRVKRRADGTVER---RLVAKGFNQQEGIDYGETFGPV 25
             IGCKWVY+VKR+ADGT++R   RL+AKGF Q+ GIDY +TF PV
Sbjct: 980  IIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPV 1024


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score =  250 bits (639), Expect = 3e-63
 Identities = 125/255 (49%), Positives = 155/255 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CSAC   KSH+ P   S  V+  P +L+V D+ GPAP+ S   Y Y++  V+AFSRF W+
Sbjct: 601  CSACCLGKSHRLPTSLSATVYSQPFELVVCDLWGPAPMQSLGGYNYFLTCVDAFSRFVWV 660

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KSD L  FI F K VE  FN  IK  QS+ GGE+  F K+L   G  HRF+CPH 
Sbjct: 661  FPLRLKSDTLPQFIQFKKMVELQFNYPIKSVQSNGGGEFRPFTKYLNDLGIVHRFTCPHT 720

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
              QNG+VER+HR+ VE+G            FW  +F  A +L+N+L SV   ++S Y  L
Sbjct: 721  HHQNGIVERKHRYTVETGLALLAQSTLPLKFWDHSFVTAAYLINRLPSVSLNNQSLYFKL 780

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
              + PDY  LR FGC CFP LRPY+  KLD RS  C FL Y   HKGYKCL  P G +Y 
Sbjct: 781  LNKQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTAHKGYKCL-APNGHIYI 839

Query: 1216 SRDVVFVEEKFPVST 1172
            S+DV+F E KFP ST
Sbjct: 840  SKDVLFQESKFPYST 854


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  238 bits (608), Expect(2) = 3e-63
 Identities = 122/257 (47%), Positives = 157/257 (61%), Gaps = 3/257 (1%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C AC   KS + PF SS+     PL+ +  D+ GP+PI S + +RYY +F++ +SRF+WI
Sbjct: 498  CEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWI 557

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEY--NKFAKFLQANGTHHRFSCP 1583
             P+  KSD  +IF+ F K VEN  N KI VFQ D GGE+  +KF + LQ +G     S P
Sbjct: 558  YPLKLKSDFYNIFVAFHKLVENQLNHKISVFQCDGGGEFVNHKFLQHLQNHGIQQHISYP 617

Query: 1582 HASAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKL-SSVPTGSKSPY 1406
            H   QNGL ER+HRH+VE G            FW +AFF A FL+N L +S    + SPY
Sbjct: 618  HTPQQNGLAERKHRHLVELGLSMLFQSKVPLKFWVEAFFTANFLINLLPTSAVEDAISPY 677

Query: 1405 ELLFKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGR 1226
            E L +  PDY +LR+FGC CFP +R Y   K D RS  C FL Y   +KGY+CL+ PTGR
Sbjct: 678  EKLHQTTPDYTALRSFGCACFPTMRDYAMNKFDPRSLKCVFLGYNDKYKGYRCLYPPTGR 737

Query: 1225 VYWSRDVVFVEEKFPVS 1175
            VY SR V+F E  +P S
Sbjct: 738  VYISRHVIFDETAYPFS 754



 Score = 33.9 bits (76), Expect(2) = 3e-63
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTP-KALFG---EHASIQT*HQRLVHPMLRTIQSVVRH 1972
            D+ T ++ + G   DGLY L+  +  KA F    + AS +  H+RL HP  + +Q +V+ 
Sbjct: 426  DKATKKLLIMGSTCDGLYCLKDDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQLVKT 485

Query: 1971 HCLPVSNS 1948
            + + ++ +
Sbjct: 486  NSISINKT 493



 Score = 67.4 bits (163), Expect = 5e-08
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
 Frame = -1

Query: 408  EQLVYSALP----PPTTSNHPMVTQGKDGIFKKKFVVASKHAKITDNLFELSCYSQAKND 241
            E L+ + +P    PP T+ HPM+T+ K GI K          K+T    E    + A   
Sbjct: 877  EDLMAAPVPTQQAPPPTNTHPMITRAKVGITKPNPRYVFLSHKVTYP--EPKTVTAALKH 934

Query: 240  PKWRPHMDLEIYALLKNGT*SXXXXXXXXXXIGCKWVYRVKRRADGTVER---RLVAKGF 70
            P W   M  E+    +  T S          +G KWV+R K  ADGT+ +   R+VAK F
Sbjct: 935  PGWTGAMTEEMGNCSETNTWSLVPYTPNMHVLGSKWVFRTKLHADGTLNKLKARIVAKCF 994

Query: 69   NQQEGIDYGETFGPV 25
             Q+EGI Y ET+ PV
Sbjct: 995  LQEEGIGYLETYSPV 1009


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  239 bits (611), Expect(2) = 4e-63
 Identities = 122/255 (47%), Positives = 154/255 (60%), Gaps = 3/255 (1%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            C +C   KS + PF +S  V   PL+ I  DV GP+P+ S + ++YY++ ++ +SR+ W+
Sbjct: 496  CVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYVVLIDNYSRYCWM 555

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEY--NKFAKFLQANGTHHRFSCP 1583
             PM  KSD  SIFI F   V+N F+T I  FQ D GGE+  N+F   LQ NG     SCP
Sbjct: 556  YPMKKKSDFHSIFIAFQSLVQNQFHTTIGTFQCDGGGEFISNQFLLHLQKNGIQQLLSCP 615

Query: 1582 HASAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLS-SVPTGSKSPY 1406
            H   QNGL ERRHRH+VE G            +W +AF  A FL N L  S  T + SPY
Sbjct: 616  HTPQQNGLAERRHRHIVELGLSLLFQSRAPQKYWVEAFMTANFLSNLLPHSANTNTASPY 675

Query: 1405 ELLFKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGR 1226
            E L  ++P Y +LR FGC CFP+LRPY + KLD RS  C FL Y   +KGY+CL   TGR
Sbjct: 676  EKLHNKSPSYDALRIFGCACFPMLRPYTQNKLDPRSLQCVFLGYSEKYKGYRCLLPATGR 735

Query: 1225 VYWSRDVVFVEEKFP 1181
            VY SR V+F E KFP
Sbjct: 736  VYISRHVIFDESKFP 750



 Score = 32.3 bits (72), Expect(2) = 4e-63
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTPKALFGEH---ASIQT*HQRLVHPMLRTIQ 1987
            D+ T +V LQG+   GLY+++     A F      AS +  HQRL HP    +Q
Sbjct: 425  DKATKKVLLQGRNTKGLYSIKEPAFHAFFSTRQVAASDEVWHQRLGHPNPHILQ 478


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  249 bits (635), Expect = 9e-63
 Identities = 125/252 (49%), Positives = 156/252 (61%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS+C   KSH+ P   S+     PL+L+ +D+ GPA + S    +Y+ILFV+ +SR+TW+
Sbjct: 517  CSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWL 576

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              + +K   L IF  F   VEN F  KIK  Q D+GGE+  F  FLQ +G  HRFSCP+ 
Sbjct: 577  YLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYN 636

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
            S+QNG VER+HRHVVE+G            FW  AF  ATFL+N++ S    + SPY  L
Sbjct: 637  SSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFAL 696

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            FKR PDY  LR FGCLC+P +RPY+  KL  RS  C FL Y  HHKGY CL   TGRVY 
Sbjct: 697  FKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYV 756

Query: 1216 SRDVVFVEEKFP 1181
            S  VVF E +FP
Sbjct: 757  SPHVVFDETQFP 768



 Score = 88.2 bits (217), Expect = 3e-14
 Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
 Frame = -1

Query: 606  NTTGHRKSAVNDMSASDSVPVPRMPAT----PDDHRLQSTSLTPSTVHDMSAGDLLQSNL 439
            N +       +D S    + V   P+T      +H + S +LT +  H  S  D   +  
Sbjct: 772  NISSSPSKDASDESIIPXIIVSSNPSTLSFHGSNHSMASPNLTSTLTHPTSPTDTPTTRX 831

Query: 438  FRTAVTHL-----SNEQLVYSALPPPTTSNHPMVTQGKDGIFKKKFVVASKHAKITDNLF 274
             R  V        + +Q+V   +PPP  +     T+   GI K+K +     +KI+    
Sbjct: 832  SREPVLEAEVXLPAQQQVV---VPPPRVT-----TRSMSGITKRKPIFNLAASKIS---- 879

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXIGCKWVYRVKRRADGTVE 94
            E +   QA  DP W   M  EI AL KN T            IGCKWVY++K + DG+V+
Sbjct: 880  EPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLKYKXDGSVD 939

Query: 93   R---RLVAKGFNQQEGIDYGETFGPV 25
            R   RLVA+GFNQ  G+DY ETF PV
Sbjct: 940  RYKARLVARGFNQTFGLDYFETFSPV 965


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  247 bits (631), Expect = 3e-62
 Identities = 125/256 (48%), Positives = 156/256 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C   KSH+ P Q S      PL+L+ +D+ GPA I S    RY+ILFV+ +SR+TW 
Sbjct: 522  CSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWF 581

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
              +  K   L IF  F   +EN F+TKIK  QSD+GGE+  F  FLQA G  HRFSCP+ 
Sbjct: 582  YSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYN 641

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
            S QNG VER+HRHVVE+G            +W+ AF   TFL+N++ S      SPY  L
Sbjct: 642  SXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTL 701

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F+R PDY S R FGCLC+P +RPY+  KL  RS  C FL Y  +HKG+ CL   TGRVY 
Sbjct: 702  FRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYI 761

Query: 1216 SRDVVFVEEKFPVSTS 1169
            +  VVF E  FP++ S
Sbjct: 762  TPHVVFDESTFPLAQS 777



 Score = 94.0 bits (232), Expect = 5e-16
 Identities = 69/199 (34%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
 Frame = -1

Query: 585  SAVNDMSASDSVPV----PRMPATPDDHRLQSTSLTPSTVHDMSAGD----LLQSNLFRT 430
            S+ ND SA  S P     P  P    D ++   S+     H +S  +       S+   T
Sbjct: 781  SSSNDTSAEGSTPALITPPSFPCLLPDSKISHASIDS---HSLSTSESPIPTTSSSPLDT 837

Query: 429  AVTHLSNEQLVYSALPPPTTSNHP-MVTQGKDGIFKKKFVVASKHAKITDNLFELSCYSQ 253
            + +  + +    S   P  T+  P M T+   GI KKK ++     K++    E S   Q
Sbjct: 838  SSSSPAIDLSPKSVPEPQITALAPRMTTRSMRGITKKKTILDLSAIKVS----EPSTLKQ 893

Query: 252  AKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXIGCKWVYRVKRRADGTVER---RLV 82
            A  DP W   M++EI AL +N T            IGCKWVY++K + DG++ER   RLV
Sbjct: 894  AFKDPNWTKAMEMEIAALHRNHTWDLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLV 953

Query: 81   AKGFNQQEGIDYGETFGPV 25
            AKG+NQ  G+DY ETF PV
Sbjct: 954  AKGYNQTHGLDYFETFSPV 972


>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
          Length = 1110

 Score =  236 bits (602), Expect(2) = 5e-62
 Identities = 119/256 (46%), Positives = 160/256 (62%), Gaps = 3/256 (1%)
 Frame = -3

Query: 1939 FCSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTW 1760
            FCS C   KS K PF  S+     PL+L+ +DV GP+P  S++ + YYI+FV+ F+R++W
Sbjct: 735  FCSDCALAKSSKLPFVFSSCTTSKPLELVHTDVWGPSPQXSSQGFXYYIIFVDDFTRYSW 794

Query: 1759 ILPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEY--NKFAKFLQANGTHHRFSC 1586
              P+  KSDVLS F+ +   VEN   TKI   +SDSG EY    F++FL  +G HH+ +C
Sbjct: 795  FYPLKCKSDVLSTFMEYKSLVENSLCTKIXTLRSDSGXEYLSTSFSQFLATHGIHHQLTC 854

Query: 1585 PHASAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSK-SP 1409
            PH   QNG  ER+HRH+VE+             +W +AF  A +L+N+L   PT S+ SP
Sbjct: 855  PHTPEQNGCAERKHRHLVETARTLLTASKVPHIYWVEAFNTAIYLINRL---PTASRQSP 911

Query: 1408 YELLFKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTG 1229
            +E L+ RAP+Y  L+ FGC CFP L+PY  +KLD +S  C FL Y  +HKGY+CL   T 
Sbjct: 912  WESLYHRAPNYDLLKVFGCACFPWLKPYTSSKLDPKSRACVFLGYSLNHKGYRCLDPATH 971

Query: 1228 RVYWSRDVVFVEEKFP 1181
            RVY SR V+F E  FP
Sbjct: 972  RVYISRHVIFNESSFP 987



 Score = 32.3 bits (72), Expect(2) = 5e-62
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTPKALFGEH--------ASIQT*HQRLVHPMLRTIQS 1984
            D  +G    +G V+ G Y   H +  A  G H        AS    HQRL HP ++ +  
Sbjct: 661  DLSSGRXRFKGPVQQGFYPF-HFSSSAT-GNHKALTATAKASTDVWHQRLGHPSVKILHK 718

Query: 1983 VVRHHCLPV 1957
            +    C+PV
Sbjct: 719  LASQSCIPV 727


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  230 bits (586), Expect(2) = 6e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.1 bits (87), Expect(2) = 6e-62
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTPKA--LFGEHASIQT*---HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + +A  +F    S  T    H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 6e-12
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 26.6 bits (57), Expect(2) = 6e-12
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSYNGPQPTTQPHQTQNSN 850


>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  230 bits (586), Expect(2) = 6e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.1 bits (87), Expect(2) = 6e-62
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLYTLQHVTPKA--LFGEHASIQT*---HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + +A  +F    S  T    H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 6e-12
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 26.6 bits (57), Expect(2) = 6e-12
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSYNGPQPTTQPHQTQNSN 850


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 72.4 bits (176), Expect(2) = 3e-11
 Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  +I A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSKINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 25.8 bits (55), Expect(2) = 3e-11
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSN 850


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTILSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 6e-12
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 26.6 bits (57), Expect(2) = 6e-12
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSYNGPQPTAQPHQTQNSN 850


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 1e-11
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSN 850


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 6e-12
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 26.6 bits (57), Expect(2) = 6e-12
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSYNGPQPTAQPHQTQNSN 850


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 498  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 556

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 557  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 616

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 617  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 676

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 677  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 736

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 737  SRHVQFDERCFPFSTTN 753



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 423  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 483  NHSLPVLN 490



 Score = 73.9 bits (180), Expect(2) = 1e-11
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 860  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 919

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 920  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 960

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 961  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 1016

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 1017 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1050



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 817 PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSN 850


>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
            gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
            transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  229 bits (584), Expect(2) = 8e-62
 Identities = 115/257 (44%), Positives = 156/257 (60%)
 Frame = -3

Query: 1936 CSACLENKSHKFPFQSSTMVF*HPLDLIVSDV*GPAPI*SNKSYRYYILFVNAFSRFTWI 1757
            CS C  NKSHK PF +ST+    PL+ I SDV   +PI S  +YRYY++FV+ F+R+TW+
Sbjct: 479  CSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYRYYVIFVDHFTRYTWL 537

Query: 1756 LPMHAKSDVLSIFITFSKHVENLFNTKIKVFQSDSGGEYNKFAKFLQANGTHHRFSCPHA 1577
             P+  KS V   FI F   VEN F T+I    SD+GGE+     +L  +G  H  S PH 
Sbjct: 538  YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHT 597

Query: 1576 SAQNGLVERRHRHVVESGXXXXXXXXXXXSFWYDAFFMATFLMNKLSSVPTGSKSPYELL 1397
               NGL ER+HRH+VE G           ++W  AF +A +L+N+L +     +SP++ L
Sbjct: 598  PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 657

Query: 1396 FKRAPDYLSLRTFGCLCFPLLRPYDRTKLDSRSSPCAFLCYCAHHKGYKCLHLPTGRVYW 1217
            F + P+Y  L+ FGC C+P LRPY+R KL+ +S  CAF+ Y      Y CLH+PTGR+Y 
Sbjct: 658  FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 717

Query: 1216 SRDVVFVEEKFPVSTSH 1166
            SR V F E  FP ST++
Sbjct: 718  SRHVQFDERCFPFSTTN 734



 Score = 38.5 bits (88), Expect(2) = 8e-62
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 2139 DRITGEVALQGQVRDGLY-----TLQHVTPKALFGEHASIQT*HQRLVHPMLRTIQSVVR 1975
            D  TG   LQG+ +D LY     + Q V+  A     A+  + H RL HP L  + SV+ 
Sbjct: 404  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 463

Query: 1974 HHCLPVSN 1951
            +H LPV N
Sbjct: 464  NHSLPVLN 471



 Score = 73.9 bits (180), Expect(2) = 1e-11
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
 Frame = -1

Query: 624  NPTVPGNTTGHRKSAVNDMS-ASDSVPVPRMPATPDDHRLQSTSLTPSTVHDMSAGDLLQ 448
            NP  P   + ++ S +     +S  +P P    +  +    S++ TP     + A  ++Q
Sbjct: 841  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 900

Query: 447  SNLFRTAVTHLSNEQLVYSALPPPTTSNHPMVTQGKDGIFK--KKFVVASKHAKITDNLF 274
             N                 A  P  T  H M T+ KDGI K  +K+  A+  A  ++   
Sbjct: 901  VN-----------------AQAPVNT--HSMATRAKDGIRKPNQKYSYATSLAANSEPRT 941

Query: 273  ELSCYSQAKNDPKWRPHMDLEIYALLKNGT*SXXXXXXXXXXI-GCKWVYRVKRRADGTV 97
             +    QA  D +WR  M  EI A + N T            I GC+W++  K  +DG++
Sbjct: 942  AI----QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 997

Query: 96   ER---RLVAKGFNQQEGIDYGETFGPV*GCTSGR 4
             R   RLVAKG+NQ+ G+DY ETF PV   TS R
Sbjct: 998  NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1031



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 809 PASATATPLGASPTVPSITSSGMSSLHHATTSSN 708
           P+S+ ++P  + PT PS      ++  H T +SN
Sbjct: 798 PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSN 831