BLASTX nr result
ID: Papaver30_contig00014999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00014999
(2135 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 613 e-172
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 602 e-169
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 597 e-167
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 593 e-166
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 591 e-165
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 590 e-165
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 589 e-165
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 587 e-164
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 585 e-164
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 584 e-163
ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB ... 571 e-159
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 569 e-159
ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB ... 568 e-159
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-... 567 e-158
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ... 567 e-158
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota... 566 e-158
gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 564 e-157
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-... 560 e-156
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-... 560 e-156
gb|AKC88661.1| sigma factor [Melianthus villosus] 559 e-156
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 613 bits (1582), Expect = e-172
Identities = 339/562 (60%), Positives = 396/562 (70%), Gaps = 5/562 (0%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS---AV 1792
MACLLPQF C+PD + K R +C R QC+L+TTTA+ V
Sbjct: 1 MACLLPQF-KCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTV 59
Query: 1791 VDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXXXXX 1612
VD EKL++PSLEAHL+S+ DR ++Y+G++ PPTK E T+ATE
Sbjct: 60 VDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAV 119
Query: 1611 XXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGLQ 1435
A M N ++ D + + ++ T + E+ +
Sbjct: 120 EAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHH 179
Query: 1434 PLQAESRTEEEEIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXX 1255
L AESR +E D D L+PTDEEL+LLQ+QL+ IAVRSGRQTE
Sbjct: 180 SLGAESRPKE-------DSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEK 232
Query: 1254 XXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXX 1078
K + +Q+VDY+DPLRYLRGTTS+SRLLTA EEL+ SEGIQ
Sbjct: 233 VAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLK 292
Query: 1077 XXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 898
ER GG+PT AQWAAAAG+DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN
Sbjct: 293 LEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 352
Query: 897 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 718
YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 353 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 412
Query: 717 FHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGI 538
FHMVEATYRV+EARKQL++E GR PD++E+AEATGLSMKRL AVLLTPKAPRSLDQK GI
Sbjct: 413 FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 472
Query: 537 NESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTL 358
N++LKPSE+I++PD ET+E++L+K+FM+QDLEKVL +LNPREKQV+RWRFGLEDGRMKTL
Sbjct: 473 NQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTL 532
Query: 357 QEIGELMGVSRERIRQIESCAF 292
QEIGELMGVSRERIRQIESCAF
Sbjct: 533 QEIGELMGVSRERIRQIESCAF 554
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 602 bits (1553), Expect = e-169
Identities = 333/567 (58%), Positives = 396/567 (69%), Gaps = 10/567 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYL---FKTRQPVCIRAQCVLTTTTAS-- 1798
MACLLPQF C+PD K+R + + QCVL+TTT +
Sbjct: 1 MACLLPQF-KCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMT 59
Query: 1797 -AVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
+VD+EKL++PSLE+H +S+A DR +SY+G+ GPPTK + E T+A E+
Sbjct: 60 TTLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAA 119
Query: 1620 XXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLL 1444
A M D S + ++ +F ++ L T+ +
Sbjct: 120 AAAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGR 179
Query: 1443 GLQPLQAESRTEEEEIIPVT--DCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1270
+ ESR EEE+ + + D D L+ +DEE +LLQ+QL IAVRSGRQTE
Sbjct: 180 IDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRA 239
Query: 1269 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1093
+ A +Q++DY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 240 RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299
Query: 1092 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 913
Q ERCGG+PT AQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI
Sbjct: 300 QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359
Query: 912 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 733
SIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 360 SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419
Query: 732 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 553
TIRLPFHMVEATYRV+EA+KQL++E GR PD++E+AEATGLSMKRL AVLLTPKAP SLD
Sbjct: 420 TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479
Query: 552 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 373
QK G+N+ +KPSEII++PD ET+E++LIKQFM+QDLEKVL +LNPREKQV+RWRFG+EDG
Sbjct: 480 QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539
Query: 372 RMKTLQEIGELMGVSRERIRQIESCAF 292
RMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 540 RMKTLQEIGELMGVSRERIRQIESCAF 566
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 597 bits (1538), Expect = e-167
Identities = 338/563 (60%), Positives = 390/563 (69%), Gaps = 6/563 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTT---TASAV 1792
M+CLLPQF C PD K+R+PVC RAQC+L+TT T++AV
Sbjct: 1 MSCLLPQF-KCQPDTFSIHFRTHYLQNSNFCQSA-KSREPVCFRAQCILSTTSPSTSTAV 58
Query: 1791 VDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXXXXX 1612
+D+EKL+LPS EAH SL + +YVGS+GPP KE T+ATET
Sbjct: 59 LDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPP-KETFGSTLATETLITGDDAVIAAAAA 117
Query: 1611 XXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGLQP 1432
A + + + +E P + +T+ +R+ +
Sbjct: 118 EAVALARAAAKVAKDAAILVKSFPSSEAESKLEI-PSIADVSSRWPQFTETDRARIIGDS 176
Query: 1431 LQAESRTEEEEII--PVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXX 1258
+ AE+ + EE + P + D LEPT EELELLQ QL+ IAVRS RQTE
Sbjct: 177 VTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAE 236
Query: 1257 XXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXX 1081
K P+QEVDY+DPLRYLRGTTS+S+LLTA EEL+LSEGIQ
Sbjct: 237 KAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLL 296
Query: 1080 XXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAK 901
ERCGG+PT QWAAAAGVDQKTLR RLNYGI CKD+MIKSNIRLVISIAK
Sbjct: 297 KLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAK 356
Query: 900 NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 721
NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 357 NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 416
Query: 720 PFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFG 541
PFHMVEATYRVKEARKQL++E GR PDD+E+AEATGLSMKRL AVLLTPKAPRSLDQK G
Sbjct: 417 PFHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIG 476
Query: 540 INESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKT 361
IN LKPSEII++PD ET+ED+L+KQFM+QDLEKVL +L+PRE QV+RWRFGLEDGR+KT
Sbjct: 477 INMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKT 536
Query: 360 LQEIGELMGVSRERIRQIESCAF 292
LQEIGE+MGVSRERIRQIES AF
Sbjct: 537 LQEIGEIMGVSRERIRQIESSAF 559
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 593 bits (1530), Expect = e-166
Identities = 336/572 (58%), Positives = 395/572 (69%), Gaps = 10/572 (1%)
Frame = -3
Query: 1977 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1798
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1797 A------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXX 1636
V+D+EKL+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1635 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFQPKTESIHLGTVHYTDA 1459
A M ++ A+ K + T + + T+
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TER 194
Query: 1458 ERSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEX 1285
ER+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 195 ERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTER 254
Query: 1284 XXXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQ 1108
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+Q
Sbjct: 255 KARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQ 314
Query: 1107 LSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSN 928
LS GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SN
Sbjct: 315 LSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSN 374
Query: 927 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 748
IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL
Sbjct: 375 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 434
Query: 747 SDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKA 568
SDQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKA
Sbjct: 435 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKA 494
Query: 567 PRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRF 388
PRSLDQKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRF
Sbjct: 495 PRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRF 554
Query: 387 GLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
GLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 555 GLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 591 bits (1523), Expect = e-165
Identities = 334/571 (58%), Positives = 392/571 (68%), Gaps = 9/571 (1%)
Frame = -3
Query: 1977 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1798
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1797 A------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXX 1636
V+D+EKL+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1635 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAE 1456
A M ++ A+ K S + T+ E
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTSTSMWA-QLTERE 195
Query: 1455 RSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1282
R+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 196 RASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERK 255
Query: 1281 XXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQL 1105
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QL
Sbjct: 256 ARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQL 315
Query: 1104 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 925
S GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNI
Sbjct: 316 SAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNI 375
Query: 924 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 745
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 376 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 435
Query: 744 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 565
DQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+A+ATGLSMKRL AVLL PKAP
Sbjct: 436 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAP 495
Query: 564 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 385
RSLDQKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFG
Sbjct: 496 RSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFG 555
Query: 384 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
LEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 556 LEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 605
Score = 590 bits (1521), Expect = e-165
Identities = 333/571 (58%), Positives = 392/571 (68%), Gaps = 9/571 (1%)
Frame = -3
Query: 1977 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1798
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1797 A------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXX 1636
V+D+EKL+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1635 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAE 1456
A M ++ A+ K + + T+ E
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERE 195
Query: 1455 RSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1282
R+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 196 RASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERK 255
Query: 1281 XXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQL 1105
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QL
Sbjct: 256 ARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQL 315
Query: 1104 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 925
S GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNI
Sbjct: 316 SAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNI 375
Query: 924 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 745
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 376 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 435
Query: 744 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 565
DQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAP
Sbjct: 436 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAP 495
Query: 564 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 385
RSLDQK GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFG
Sbjct: 496 RSLDQKIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFG 555
Query: 384 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
LEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 556 LEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 589 bits (1519), Expect = e-165
Identities = 338/568 (59%), Positives = 387/568 (68%), Gaps = 12/568 (2%)
Frame = -3
Query: 1959 ACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA----- 1795
+CLLPQF C PD + K R+ RAQC+L+ T+ S
Sbjct: 15 SCLLPQF-KCQPDTFSIQFRT----------HAQKNRETTYFRAQCLLSATSPSTLSSAA 63
Query: 1794 ---VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXX 1624
V+DMEKL+LPSLE S +R +Y G+VGPP + N+ T+ATET
Sbjct: 64 TAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIA 123
Query: 1623 XXXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSL 1447
A M + S + +D+K +E +T + + E S
Sbjct: 124 AAASEAVTLAKAALKSAKHAALMIRNESSSNIDNK-LELSSRTSTSLSKHAELLELEHSN 182
Query: 1446 LGLQPLQAESRTEEEEIIPVTD--CDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXX 1273
+ + ++ E E ++ + + LEPT EEL+LLQVQL IAVRS RQTE
Sbjct: 183 ILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIR 242
Query: 1272 XXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEG 1096
K A +QEVDY+DPLRYLRGTTSSSRLLTA EE +LSEG
Sbjct: 243 ERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEG 302
Query: 1095 IQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLV 916
IQ ERCGG+P AQWAAAAGVDQKTLRKRLNYG LCKDKMIKSNIRLV
Sbjct: 303 IQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLV 362
Query: 915 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 736
ISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 363 ISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 422
Query: 735 RTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSL 556
RTIRLPFHMVEATYRVKEARKQL++E GRQPD++E+AEATGLSMKRL AVL+TPKAPRSL
Sbjct: 423 RTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSL 482
Query: 555 DQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLED 376
DQK GIN++LKPSE+I++P+ ETSED+L+KQFMRQDLEKVL TLNPREKQVVRWRFGLED
Sbjct: 483 DQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLED 542
Query: 375 GRMKTLQEIGELMGVSRERIRQIESCAF 292
GRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 543 GRMKTLQEIGELMGVSRERIRQIESCAF 570
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 587 bits (1512), Expect = e-164
Identities = 332/567 (58%), Positives = 386/567 (68%), Gaps = 10/567 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTT------A 1801
M+CLLPQF C PD L K R+ + R QC L+TT+
Sbjct: 1 MSCLLPQF-KCPPDTFSTHPKLHI---------LSKNREAIYFRVQCALSTTSPPLSTST 50
Query: 1800 SAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
+AV+D+EKL+LPSLE+H S+A R +Y+G VGPPT+ N E T+A ET
Sbjct: 51 TAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAA 110
Query: 1620 XXXXXXXXXXXXXXXXXXAF-MGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAER-SL 1447
A + G N+ A+ + K F ++ + +T+ ER +
Sbjct: 111 AAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGI 170
Query: 1446 LGLQPLQAESRTEEEEIIPVT-DCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1270
LG + + VT D D LEPT EELELL+ + + I VRS RQ E
Sbjct: 171 LGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRA 230
Query: 1269 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1093
K +QEVDY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 231 RAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGI 290
Query: 1092 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 913
Q ER G KPT AQWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVI
Sbjct: 291 QDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVI 350
Query: 912 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 733
SIAKNYQGAGMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 351 SIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 410
Query: 732 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 553
TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 411 TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLD 470
Query: 552 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 373
QK GIN++LKPSE+I++PD ET+E++LIKQFMR+DLEKVL +LNPREKQV+RWR+GLEDG
Sbjct: 471 QKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDG 530
Query: 372 RMKTLQEIGELMGVSRERIRQIESCAF 292
R KTLQEIGELMGVSRERIRQIESCAF
Sbjct: 531 RTKTLQEIGELMGVSRERIRQIESCAF 557
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
[Theobroma cacao]
Length = 623
Score = 585 bits (1509), Expect = e-164
Identities = 323/541 (59%), Positives = 386/541 (71%), Gaps = 17/541 (3%)
Frame = -3
Query: 1863 LFKTRQPVCIRAQCVLTTT------TASAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSV 1702
L K ++ +C R QCVL+TT TA+AV+D+EKL+LPS EAH S+A+DR +Y+G+
Sbjct: 62 LAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGAT 121
Query: 1701 GPPTKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHK 1522
GPP++ ++ T+AT+ A + +N +
Sbjct: 122 GPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEM 181
Query: 1521 HVEFQPKTESIHLGTVHYTDAERS-LLGLQPL-QAESRTEEEEIIPVTDCDSLEPTDEEL 1348
T+S +T+AER+ ++G P ++E ++ E T+ D LEPT+EEL
Sbjct: 182 KSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEEL 241
Query: 1347 ELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADP 1171
E L+ QL+ IAVRS RQTE + +Q+VDY+DP
Sbjct: 242 EHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDP 301
Query: 1170 LRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQ 991
LRYLRGTTS+SRLLTANEEL+LSEGIQ ERCGG+PT AQWAAAAGVDQ
Sbjct: 302 LRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQ 361
Query: 990 KTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 811
KTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS
Sbjct: 362 KTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 421
Query: 810 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKE 631
KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GR PD++E
Sbjct: 422 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEE 481
Query: 630 IAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPS--------EIISNPDDETSEDI 475
+AEATGLSMKRL AVLLTPKAPRSLDQK GIN++LKPS E+I++P+ ET+ED+
Sbjct: 482 VAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDM 541
Query: 474 LIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 295
LIKQFMR+DLEKVL +L+ RE+QV+RWRFG+EDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 542 LIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCA 601
Query: 294 F 292
F
Sbjct: 602 F 602
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 584 bits (1505), Expect = e-163
Identities = 329/534 (61%), Positives = 376/534 (70%), Gaps = 12/534 (2%)
Frame = -3
Query: 1857 KTRQPVCIRAQCVLTTTTASA--------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSV 1702
K R+ RAQC+L+ T+ S V+DMEKL+LPSLE S +R +Y G+V
Sbjct: 51 KNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAV 110
Query: 1701 GPPTKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDH 1525
GPP + N+ T+ATET A M + S + +D+
Sbjct: 111 GPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNIDN 170
Query: 1524 KHVEFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIPVTD--CDSLEPTDEE 1351
K +E +T + + E S + + ++ E E ++ + + LEPT EE
Sbjct: 171 K-LELSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEE 229
Query: 1350 LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYAD 1174
L+LLQVQL IAVRS RQTE K A +QEVDY+D
Sbjct: 230 LQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSD 289
Query: 1173 PLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVD 994
PLRYLRGTTSSSRLLTA EE +LSEGIQ ERCGG+P AQWAAAAGVD
Sbjct: 290 PLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVD 349
Query: 993 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 814
QKTLRKRLNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA
Sbjct: 350 QKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDA 409
Query: 813 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDK 634
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GRQPD++
Sbjct: 410 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNE 469
Query: 633 EIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMR 454
E+AEATGLSMKRL AVL+TPKAPRSLDQK GIN++LKPSE+I++P+ ETSED+L+KQFMR
Sbjct: 470 EVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMR 529
Query: 453 QDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
QDLEKVL TLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 530 QDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 583
>ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Pyrus x
bretschneideri]
Length = 643
Score = 571 bits (1471), Expect = e-159
Identities = 313/534 (58%), Positives = 375/534 (70%), Gaps = 12/534 (2%)
Frame = -3
Query: 1857 KTRQPVCIRAQCVLTTTTASA------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGP 1696
KTR P+C RAQ +L+TT+ S V+D+E+L+LPSLE + SLA R +Y G++GP
Sbjct: 93 KTRDPLCFRAQYILSTTSHSTSTATTTVLDLERLRLPSLEVNSDSLASSRPWTYTGAIGP 152
Query: 1695 PTKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFM---GGDNSDARLDH 1525
T+ N T+ATET M N A+ +
Sbjct: 153 LTEANFGATLATETLLTSEEAVIEAAAAEAVTLAKAALKVAKDVAMLVSSSTNHSAKPES 212
Query: 1524 KHVEFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEE 1351
P+T+++H + + E+ + AE+ E+ I + + + +E T EE
Sbjct: 213 SS-PVSPETKALHFNWAQHMETEQVSRVGASMGAETAFVEDHFIQSAIKELEEVEQTYEE 271
Query: 1350 LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYAD 1174
ELLQ QL+ I +S RQTE K + +QE+D++D
Sbjct: 272 FELLQEQLSKGITAKSSRQTERKARRAKAAEKAAASVVSVKSGSATRKKRSSVQEIDHSD 331
Query: 1173 PLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVD 994
PLRYLR TT +SRLLTANEE++ SEGIQ +RCGG+PT+AQWAAAAGVD
Sbjct: 332 PLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQPTIAQWAAAAGVD 391
Query: 993 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 814
QKTLRKR+NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Sbjct: 392 QKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 451
Query: 813 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDK 634
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++ GR P+D+
Sbjct: 452 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSLNGRHPNDE 511
Query: 633 EIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMR 454
E+AEATGLSMKRL AVLLTPKAPRSL+QK GIN++LKPSE+IS+PD ET+ED+L+K+FM+
Sbjct: 512 EVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEDLLMKKFMK 571
Query: 453 QDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
QDLEKVL +LN REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 572 QDLEKVLDSLNTREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 625
>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 569 bits (1466), Expect = e-159
Identities = 318/566 (56%), Positives = 390/566 (68%), Gaps = 9/566 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1798
M+CLLPQF C PD K ++ +C R+QCVL+TT+++
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSTATT 52
Query: 1797 AVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXXX 1618
AV+D+EKL+LPS EAH S+ DR +Y G+ GPP++ + T+ATE
Sbjct: 53 AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112
Query: 1617 XXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLG 1441
A M ++S A+ + K T+++ +T+AER+ +
Sbjct: 113 AAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPG-SSATDTLTSKWGLFTEAERAGIV 171
Query: 1440 LQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1267
+ E EE++ + D LEPT+EEL+LL+ QL+ IAVRS RQ E
Sbjct: 172 GDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTR 231
Query: 1266 XXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 1090
+ +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 232 AAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQ 291
Query: 1089 VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 910
ERCG PT AQWAAAA VD+KTLR+RLNYG +CKDKMIKSNIRLVIS
Sbjct: 292 DLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVIS 351
Query: 909 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 730
IAKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 352 IAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 411
Query: 729 IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 550
IRLPFHMVEATYRVKEARKQL++E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQ
Sbjct: 412 IRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQ 471
Query: 549 KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 370
K GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR
Sbjct: 472 KIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGR 531
Query: 369 MKTLQEIGELMGVSRERIRQIESCAF 292
MKTLQEIGE MGVSRERIRQIE CAF
Sbjct: 532 MKTLQEIGESMGVSRERIRQIELCAF 557
>ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Malus
domestica]
Length = 638
Score = 568 bits (1465), Expect = e-159
Identities = 313/531 (58%), Positives = 370/531 (69%), Gaps = 9/531 (1%)
Frame = -3
Query: 1857 KTRQPVCIRAQCVLTTTTASA------VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGP 1696
KTR P+C RAQ +L+TT S V+DMEKL+LPSLE + SLA R +Y G++ P
Sbjct: 91 KTRDPLCFRAQYILSTTPRSTSTATTTVLDMEKLRLPSLEFNSDSLASSRPWTYTGAIDP 150
Query: 1695 PTKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHV 1516
PT+ N T+ATET M +
Sbjct: 151 PTEANFGSTLATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVAMLVSTIHSAKPEISS 210
Query: 1515 EFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIPVTDCDS--LEPTDEELEL 1342
P+T ++H + + E+ +G + AE+ E+ I + +S +E T+EE EL
Sbjct: 211 PVSPETNALHFNWAQHIETEQVRVGAS-MGAETAFLEDHFIQYAEKESEEVERTNEEFEL 269
Query: 1341 LQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLR 1165
LQ QL+ I +S RQTE K + +QE+D++DPLR
Sbjct: 270 LQEQLSKGITAKSSRQTERKARRSKAAEKAAASVVSVKSGSTTRKKRSSVQEIDHSDPLR 329
Query: 1164 YLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKT 985
YLR TT +SRLLTANEE++LS GIQ +RCG +PT+AQWAAAAGVDQKT
Sbjct: 330 YLRSTTHTSRLLTANEEIELSAGIQELLKLEKLQEELTQRCGRQPTIAQWAAAAGVDQKT 389
Query: 984 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 805
LRKR+N GILCKDKMIKSNIRLVISIAKNYQG+GMNLQDLVQ+GCRGLVRGAEKFDASKG
Sbjct: 390 LRKRVNCGILCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQQGCRGLVRGAEKFDASKG 449
Query: 804 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIA 625
FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ GR P+D+E+A
Sbjct: 450 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSLNGRHPNDEEVA 509
Query: 624 EATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDL 445
EATGLSMKRL AVLLTPKAPRSLDQK GIN + KPSE+IS+PD ET+ED+L+K+FM+QDL
Sbjct: 510 EATGLSMKRLSAVLLTPKAPRSLDQKIGINLNFKPSEVISDPDAETAEDLLMKKFMKQDL 569
Query: 444 EKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
EKVL +LNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 570 EKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 620
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
sinensis]
Length = 525
Score = 567 bits (1462), Expect = e-158
Identities = 315/507 (62%), Positives = 367/507 (72%), Gaps = 4/507 (0%)
Frame = -3
Query: 1800 SAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
+ V+D+EKL+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 2 TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61
Query: 1620 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFQPKTESIHLGTVHYTDAERSLL 1444
A M ++ A+ K + T + + T+ ER+ +
Sbjct: 62 SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 119
Query: 1443 GLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1270
+ E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 120 IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 179
Query: 1269 XXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1093
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 180 RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 239
Query: 1092 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 913
Q ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 240 QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 299
Query: 912 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 733
SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 300 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 359
Query: 732 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 553
TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 360 TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLD 419
Query: 552 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 373
QKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDG
Sbjct: 420 QKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDG 479
Query: 372 RMKTLQEIGELMGVSRERIRQIESCAF 292
RMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 480 RMKTLQEIGELMGVSRERIRQIESSAF 506
>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
gi|763778947|gb|KJB46070.1| hypothetical protein
B456_007G347300 [Gossypium raimondii]
Length = 578
Score = 567 bits (1461), Expect = e-158
Identities = 315/565 (55%), Positives = 385/565 (68%), Gaps = 8/565 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1798
M+CLLPQF C PD K ++ +C R+QCVL+TT+++
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSMATT 52
Query: 1797 AVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXXX 1618
AV+D+EKL+LPS EAH S+ DR +Y G+ GPP++ + T+ATE
Sbjct: 53 AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112
Query: 1617 XXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGL 1438
A + N + T+++ +T+AER+ +
Sbjct: 113 AAEAVALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVG 172
Query: 1437 QPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXX 1264
+ E EE+ + + D LEPT+EEL+LL+ QL+ IAVRS RQTE
Sbjct: 173 DYVSDELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRA 232
Query: 1263 XXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQV 1087
+ +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 233 AEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQD 292
Query: 1086 XXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 907
ERCG PT AQWAAAA VD+KTLR+RLNYG +C DKMIKSNIRLVISI
Sbjct: 293 LLKLEGLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISI 352
Query: 906 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 727
AKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 353 AKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 412
Query: 726 RLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQK 547
RLPFHMVEATYRVKEARKQLF+E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQK
Sbjct: 413 RLPFHMVEATYRVKEARKQLFSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQK 472
Query: 546 FGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRM 367
GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR+
Sbjct: 473 IGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRV 532
Query: 366 KTLQEIGELMGVSRERIRQIESCAF 292
KTLQEIGE MGVSRERIRQIE CAF
Sbjct: 533 KTLQEIGESMGVSRERIRQIELCAF 557
>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 574
Score = 566 bits (1458), Expect = e-158
Identities = 329/571 (57%), Positives = 386/571 (67%), Gaps = 14/571 (2%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA---- 1795
M+CLLPQF NC PD S+L K R + AQCVL+TT+ S
Sbjct: 1 MSCLLPQF-NCKPDTFSAQFNFRTHSLPTPNSHLPKARD-INSLAQCVLSTTSPSTSVGA 58
Query: 1794 --VVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
V+ +EKL+ PSL+A+ S+ +R +Y G+ GPP + N E T+ATET
Sbjct: 59 TYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAA 118
Query: 1620 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTD---AERS 1450
DA L V + ESI L + + A+ +
Sbjct: 119 AAAEAVTLAKAAVKVA---------KDAAL---LVRPSTRAESISLVSSEARNIKTAQAA 166
Query: 1449 LLGLQPLQAESRTEEEEIIPVTDC----DSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1282
L+AE E+ P D + L+PT+EEL +LQ QL+ IAVRS RQ+E
Sbjct: 167 SRVRDSLRAEMALIEDH--PPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERK 224
Query: 1281 XXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQL 1105
K A +Q+VD++DPLRYLR TTS+SRLLTA EE++L
Sbjct: 225 AKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIEL 284
Query: 1104 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 925
SEGIQ ERCGG PT AQWAAAAGVDQKTLR+R+NYGILCKDKMIKSN+
Sbjct: 285 SEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNV 344
Query: 924 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 745
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 345 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 404
Query: 744 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 565
DQSRTIRLPFHMVEATYRVKEARKQL++E GRQP+D+E+AEATGLSMKRL AVLLTPKAP
Sbjct: 405 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAP 464
Query: 564 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 385
RSL+QK GIN++LKPSEII++PD ET ED+L +QFM+QDL+KVL +LN REKQV+RWRFG
Sbjct: 465 RSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFG 524
Query: 384 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
++DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 525 MDDGRMKTLQEIGELMGVSRERIRQIESCAF 555
>gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 525
Score = 564 bits (1453), Expect = e-157
Identities = 312/506 (61%), Positives = 364/506 (71%), Gaps = 3/506 (0%)
Frame = -3
Query: 1800 SAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
+ V+D+EKL+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 2 TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61
Query: 1620 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLG 1441
A M ++ A+ K + + T+ ER+ +
Sbjct: 62 SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERERASII 120
Query: 1440 LQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1267
+ E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 121 GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 180
Query: 1266 XXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 1090
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 181 AAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 240
Query: 1089 VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 910
ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 241 DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 300
Query: 909 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 730
IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 301 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 360
Query: 729 IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 550
IRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAPRSLDQ
Sbjct: 361 IRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQ 420
Query: 549 KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 370
K GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDGR
Sbjct: 421 KIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGR 480
Query: 369 MKTLQEIGELMGVSRERIRQIESCAF 292
MKTLQEIGELMGVSRERIRQIES AF
Sbjct: 481 MKTLQEIGELMGVSRERIRQIESSAF 506
>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 629
Score = 560 bits (1443), Expect = e-156
Identities = 316/516 (61%), Positives = 362/516 (70%), Gaps = 9/516 (1%)
Frame = -3
Query: 1812 TTTASAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXX 1633
+T SAV+D+ +L+L S EA+ S+A DR +Y G+VGPPT+ N + +ATE
Sbjct: 98 STATSAVLDIPRLKLLSFEANPDSVAPDRPWTYTGAVGPPTEANTKSALATENLVTSDEA 157
Query: 1632 XXXXXXXXXXXXXXXXXXXXXXAFM--GGDN----SDARLDHKHVEFQPKTESIHLGTVH 1471
A + G +N DA ES+ L
Sbjct: 158 VVAAAAAEAVALAKAALKFAKDAVLLVGHNNLKNSDDAGRGTLSEARTTPFESVPLAQPS 217
Query: 1470 YTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGR 1297
T R +G + +E + E + +TD D LEP+ EELE+LQ QL+N IAV+S R
Sbjct: 218 ETGRVR--VGAEFKGSEMKWSESSLFEDSLTDSDDLEPSPEELEILQSQLSNVIAVKSTR 275
Query: 1296 QTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTAN 1120
QTE K +QEVDY+DPLRYLRGTT SSRLLTA+
Sbjct: 276 QTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTAS 335
Query: 1119 EELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKM 940
EE +LS GIQ RCGG+PT+AQWAAAAGV+QKTLRKRLNYGILCKDKM
Sbjct: 336 EEQELSRGIQDLLKLERLEQELAARCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKM 395
Query: 939 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 760
IKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAV
Sbjct: 396 IKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAV 455
Query: 759 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLL 580
RKSLSDQSRTIRLPFHMVEATYRVKEARKQLF E GR P+D+E+AEATGLSMKRL AV+L
Sbjct: 456 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVML 515
Query: 579 TPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVV 400
TPKAPRSLDQK G N+SLKPSE+I++P+ ETSE++L+KQFMRQDLEKVL TLNPREKQVV
Sbjct: 516 TPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLEKVLDTLNPREKQVV 575
Query: 399 RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
+WRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 576 KWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 611
>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis]
Length = 641
Score = 560 bits (1443), Expect = e-156
Identities = 313/516 (60%), Positives = 363/516 (70%), Gaps = 9/516 (1%)
Frame = -3
Query: 1812 TTTASAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXX 1633
+T SAV+D+ +L+L S EA+ S+A DR +Y G VGPPT+ N + +ATE
Sbjct: 110 STATSAVLDIPRLKLLSFEANPDSVAPDRPWTYTGPVGPPTEANTKSVLATENLVTSDEA 169
Query: 1632 XXXXXXXXXXXXXXXXXXXXXXAFM--GGDN----SDARLDHKHVEFQPKTESIHLGTVH 1471
+ G +N DA ES+HL
Sbjct: 170 VVAAAAAEAVALAKAALKFAKDVVLLVGHNNLKNSDDAGRGTLSEARTTPFESVHLAQPS 229
Query: 1470 YTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGR 1297
T R +G + +E + E ++ +TD D L+P+ EELE+LQ QL+N IAV+S R
Sbjct: 230 ETG--RVGVGAEFKGSEMKWSESSLLEDSLTDSDDLDPSPEELEILQSQLSNVIAVKSTR 287
Query: 1296 QTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTAN 1120
QTE K +QEVDY+DPLRYLRGTT SSRLLTA+
Sbjct: 288 QTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTAS 347
Query: 1119 EELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKM 940
EE +LS GIQ +RCGG+PT+AQWAAAAGV+QKTLRKRLNYGILCKDKM
Sbjct: 348 EEQELSRGIQDQLKLERLEQELADRCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKM 407
Query: 939 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 760
IKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAV
Sbjct: 408 IKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAV 467
Query: 759 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLL 580
RKSLSDQSRTIRLPFHMVEATYRVKEARKQLF E GR P+D+E+AEATGLSMKRL AV+L
Sbjct: 468 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVML 527
Query: 579 TPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVV 400
TPKAPRSLDQK G N+SLKPSE+I++P+ ETSE++L+KQFMRQDLE+VL TLNPREKQVV
Sbjct: 528 TPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLERVLDTLNPREKQVV 587
Query: 399 RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 292
+WRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 588 KWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 623
>gb|AKC88661.1| sigma factor [Melianthus villosus]
Length = 565
Score = 559 bits (1441), Expect = e-156
Identities = 323/567 (56%), Positives = 383/567 (67%), Gaps = 10/567 (1%)
Frame = -3
Query: 1962 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTA------ 1801
MACLLPQF + + R+ V R QC+L TT+
Sbjct: 1 MACLLPQF--------KYPRETLFLQFRPHHYHHPRNREVVYFRPQCILCTTSTPTSEAT 52
Query: 1800 SAVVDMEKLQLPSLEAHLLSLAMDRSMSYVGSVGPPTKENIEDTVATETXXXXXXXXXXX 1621
++V++MEKL++P+LEAH SLA++R +Y+G++GPPT+ N+++T++ E
Sbjct: 53 TSVLEMEKLRMPTLEAHSTSLAVNRPWTYMGAIGPPTEGNLKETLSVEETLLADDEAVIA 112
Query: 1620 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTES---IHLGTVHYTDAERS 1450
+ NS + E +P S V T+ ER
Sbjct: 113 AAAAEAVALARAAVEFAKDAVLIANS---YQSANAESKPVISSKFDTSWSNVQLTETER- 168
Query: 1449 LLGLQPLQAESRTEEEEIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1270
+GL E T + ++ + D EPT EELEL+Q +L N I VRS RQTE
Sbjct: 169 -VGL----LEDDTMQNAVL---ESDDAEPTHEELELIQEELFNNITVRSKRQTERKARRA 220
Query: 1269 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1093
K +QE+DY+D LRYLRGTTSSSRLLTANEELQLS GI
Sbjct: 221 RAAEKAAANVVSVKSGSTSRKKHVSLQEIDYSDQLRYLRGTTSSSRLLTANEELQLSVGI 280
Query: 1092 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 913
Q ERCG +PT AQ AAAAGVD+KTLRKRLN+GI+CK+KMIKSNIRLVI
Sbjct: 281 QDLLKLEKLQEELAERCGCQPTFAQCAAAAGVDKKTLRKRLNHGIICKNKMIKSNIRLVI 340
Query: 912 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 733
SIAKNYQGAGMNLQDLVQEGCRGL RGAEKFDASKGFKFSTYAHWWIKQA+RKSLSDQSR
Sbjct: 341 SIAKNYQGAGMNLQDLVQEGCRGLARGAEKFDASKGFKFSTYAHWWIKQAIRKSLSDQSR 400
Query: 732 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 553
TIRLPFHMVEATYRVKEARKQL++E GR PDD+EIAEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 401 TIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEATGLSMKRLTAVLLTPKAPRSLD 460
Query: 552 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 373
QK GIN++LKPSE+I++P+ ET+ED+LIK+FM+QDLEKVL +LN REKQVVRWR+GL DG
Sbjct: 461 QKIGINQNLKPSEVIADPEVETAEDLLIKKFMKQDLEKVLNSLNLREKQVVRWRYGLVDG 520
Query: 372 RMKTLQEIGELMGVSRERIRQIESCAF 292
R+KTLQEIGELMGVSRERIRQIESCAF
Sbjct: 521 RIKTLQEIGELMGVSRERIRQIESCAF 547