BLASTX nr result
ID: Papaver30_contig00014575
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver30_contig00014575 (2766 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 410 0.0 emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 458 0.0 emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 393 0.0 emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 426 0.0 gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposo... 352 e-170 gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposo... 352 e-170 gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 425 e-149 gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 416 e-144 gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 426 e-144 gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 424 e-142 gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 406 e-141 gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus... 398 e-140 emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 417 e-139 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 395 e-138 ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) ... 397 e-136 ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonic... 394 e-136 gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 377 e-135 ref|XP_009359358.1| PREDICTED: uncharacterized protein LOC103949... 393 e-134 emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 380 e-132 gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 369 e-130 >emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] Length = 1365 Score = 410 bits (1054), Expect(3) = 0.0 Identities = 228/540 (42%), Positives = 310/540 (57%), Gaps = 24/540 (4%) Frame = +1 Query: 829 CV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNAAITSVT---- 993 CV LGYS HKGY + LTG++ +S VVFDE FP+A+ S +A+ SV Sbjct: 682 CVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDASDESVIPAII 741 Query: 994 -----------------VLPSSTSATAIDPPTTIINEVXXXXXXXXXXXXXXXXXXXXXX 1122 P+ TSA P T + Sbjct: 742 VSSNPSTLSFHGSNHSMASPNLTSALTHPTPPT---DTPTTRSLREXVLEAEVTLPAQQQ 798 Query: 1123 XXXXXHSMTTRRKQGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALL 1302 +TTR GI K K + I PT +A KDP W +M +I AL Sbjct: 799 VVVPPPRVTTRSMSGITKRK---HIFNLAAFKISEPTTLKQAIKDPNWAEAMQTEIAALH 855 Query: 1303 QNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPV 1482 +N TW LV NIIGCKW++++K DG+++RYKARLVA+G+NQ G+DY + F+PV Sbjct: 856 KNQTWDLVDPPKDVNIIGCKWVYKLKYKPDGSVDRYKARLVARGFNQTFGLDYFETFSPV 915 Query: 1483 VKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKK 1662 VK TIR++++I+L W++RQLDV+N FL+G L E+V+M PPG+ P+ VCKLKK Sbjct: 916 VKAATIRIVLTIALSYRWELRQLDVQNXFLNGDLVEQVYMAXPPGFLHPNHPNKVCKLKK 975 Query: 1663 SLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXX 1842 +LYGLKQ+PRAWF + S L+ GF +S+ D+S+F L V++YVDDI+VTG Sbjct: 976 ALYGLKQSPRAWFTKXSSALLSWGFNSSRXDSSMFVHFGTHSTLIVLVYVDDIIVTGSSP 1035 Query: 1843 XXXXXXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPY 2022 FA++DLG+L +FLGI+ + + +HLSQ +YI++LL +T M SK Sbjct: 1036 VLIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDGGSMHLSQSKYITDLLQRTSMLDSKAA 1095 Query: 2023 STP--FAPSTTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHW 2196 +TP S + L + +YRSVVGALQYAT+TRPDIAF VNKACQ M PT HW Sbjct: 1096 ATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSVNKACQFMHRPTSTHW 1155 Query: 2197 TAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 ++VKRILRYL+GT +GL + S+ +Q ++DAD DRRS+ G ++LG NL+SW Sbjct: 1156 SSVKRILRYLKGTTTHGLXLQPSAHFTVQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSW 1215 Score = 247 bits (631), Expect(3) = 0.0 Identities = 131/318 (41%), Positives = 179/318 (56%), Gaps = 39/318 (12%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDCTFTLSNVLHVPSITRNLIH--QFTKENNCFFEFH 176 D V +GNG L IS+ G + L + +F L V HVP I+ NLI +F +NN EFH Sbjct: 369 DKVTIGNGKHLTISNTGFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFH 428 Query: 177 HDKFYVKDVITNKVLLTGPIRDGLYH---------------------------------- 254 + F+VKD+ T +VL G + +GLY Sbjct: 429 SNGFFVKDLHTKRVLAQGKLENGLYKFPVISNRKTAYVGITNDSTFQCSTIGNKRELWHH 488 Query: 255 --LDLIHSDVW-VSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVEN 425 L+L+++D+W + + S +G KY++ F++ +SR+TW+Y L K + L F +FK VEN Sbjct: 489 SLLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVEN 548 Query: 426 QLQRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXX 605 Q KIK +QSD GGE+R+ ++L GI HR SCP+ +QNGR RKHRH+VET Sbjct: 549 QFDAKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALL 608 Query: 606 XXXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLR 785 FWSYAF+TA FLINR+P+ L SP LF+ PDY FL FGC C P +R Sbjct: 609 AHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIR 668 Query: 786 PFNAHKLEPRSVRCVCFG 839 P+N HKL+ RS++CV G Sbjct: 669 PYNNHKLQYRSLKCVFLG 686 Score = 105 bits (261), Expect(3) = 0.0 Identities = 53/119 (44%), Positives = 75/119 (63%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 +LG + SK K VS SS E+EYR LA AT E++W Q+LL+EL P ++ DN Sbjct: 1207 YLGNNLVSWTASKQKVVSXSSAESEYRGLAIATXEIIWTQALLSELCISJTSIPTLYYDN 1266 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 + A Y+ NP+FH R KHIEI H++R+ V L++++I + DQ A+I K L+ SRF Sbjct: 1267 ISAYYMAKNPVFHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRF 1325 >emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] Length = 1424 Score = 458 bits (1179), Expect(3) = 0.0 Identities = 250/526 (47%), Positives = 319/526 (60%), Gaps = 15/526 (2%) Frame = +1 Query: 835 LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNAAITSVT------- 993 LGYS HKGY+ +P G I+ISRDV+FDE FP+A++ + +++ +S T Sbjct: 757 LGYSLNHKGYKCLSP-NGNILISRDVIFDEXAFPFAQLQSQKQXTSSFSSSXTSLPCQTS 815 Query: 994 ----VLPSSTSATAIDPPTTIINEVXXXXXXXXXXXXXXXXXXXXXXXXXXXHSMTTRRK 1161 VLPSSTS + P I H M TR K Sbjct: 816 LPLMVLPSSTSCSTSSPTNPSI-------FPATSNHNVASQXPPSSAPPFPSHHMITRSK 868 Query: 1162 QGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGTWQLVQADSG 1341 GIFKPK Y PT EA + W+ +M ++ ALL+N TW LV + Sbjct: 869 XGIFKPKAYLIST--------TPTSVPEALQLSHWKQAMTDEYLALLRNNTWDLVPPPTD 920 Query: 1342 YNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMIISIS 1521 +IGCKW+F++K N DGTI +YKARLVAKG++Q+ G D+ + F+PVVKPTTIR++++I+ Sbjct: 921 RKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLTIA 980 Query: 1522 LYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAPRAWF 1701 L W++RQLDV NAFL+G L E++FM QP G+ D + P++VCKL KSLYGLKQAPRAWF Sbjct: 981 LNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRAWF 1040 Query: 1702 VRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXXXXRE 1881 +L Q L GF ++K+D SLF +T Y+++YVDDIL+TG + Sbjct: 1041 EKLHQALGILGFSSTKSDQSLFINITPTHSTYILVYVDDILITGNNDQFVQHVITQLNNQ 1100 Query: 1882 FAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA--PSTTSH 2055 FA+KDLG++ +FLGIQ SAG+HLSQ +YISNLL KTKM K TP S ++ Sbjct: 1101 FALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISNLLQKTKMLHVKSVPTPMVSNQSLSNS 1160 Query: 2056 PSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRYLQGT 2235 S F LYRS VGALQYATITRPDI + VN+ CQ MQ P AHW AVKRILRYL GT Sbjct: 1161 GSAPFSNTQLYRSTVGALQYATITRPDITYSVNRVCQFMQDPLTAHWKAVKRILRYLAGT 1220 Query: 2236 LGYG--LQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNL 2367 L +G LQ +S L I F DAD A D+ DR ST G +FLG NL Sbjct: 1221 LHHGLHLQHNSNSHLNITGFCDADWASDVDDRHSTSGYCLFLGPNL 1266 Score = 207 bits (528), Expect(3) = 0.0 Identities = 102/196 (52%), Positives = 127/196 (64%), Gaps = 1/196 (0%) Frame = +3 Query: 255 LDLIHSDVW-VSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQL 431 L+LIH+D+W + S +G +YY+ FI+++SRFTW+Y L +KSE F+ FK+ VE QL Sbjct: 563 LELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQL 622 Query: 432 QRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXXX 611 KIK VQSDWGGEYR+ + YL + GI HR+SCP+ H QNG A RKHRHIVE Sbjct: 623 GHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQ 682 Query: 612 XXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRPF 791 +W AF T+ +LINRLPT L SPLE LF P Y+ L FGC C P LRPF Sbjct: 683 ASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPF 742 Query: 792 NAHKLEPRSVRCVCFG 839 N HKL+ RS+ C G Sbjct: 743 NHHKLQFRSIPCTFLG 758 Score = 84.3 bits (207), Expect(3) = 0.0 Identities = 39/81 (48%), Positives = 52/81 (64%) Frame = +2 Query: 2471 SLLTELSFHSPRAPVIWCDNMGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFI 2650 SLL EL+ S PVIWCDN+ YL+ANPI H R KHI+I ++VRE V +++ + Sbjct: 1267 SLLRELNISSSTTPVIWCDNLSTVYLSANPILHARTKHIKIDLYFVREKVLQKQIQIHHV 1326 Query: 2651 STQDQLANIFIKGLSFSRFAT 2713 + DQLA++F K SRF T Sbjct: 1327 PSSDQLADVFTKATPNSRFLT 1347 Score = 71.6 bits (174), Expect = 4e-09 Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 5/91 (5%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHD---DCTFTLSNVLHVPSITRNL--IHQFTKENNCFF 167 D V VGNG GL I HIG + T L +LHVP IT+NL + +F +N+ FF Sbjct: 380 DEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFF 439 Query: 168 EFHHDKFYVKDVITNKVLLTGPIRDGLYHLD 260 EFH +VKD T VL+ G ++ GLY D Sbjct: 440 EFHPTSCFVKDPSTRTVLMHGQLKGGLYVFD 470 >emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] Length = 1402 Score = 393 bits (1010), Expect(3) = 0.0 Identities = 224/539 (41%), Positives = 309/539 (57%), Gaps = 23/539 (4%) Frame = +1 Query: 829 CV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNAAITSVT--VL 999 CV LGYS HKGY + LTG++ +S VVFDE FP+A+ S +A+ S+ ++ Sbjct: 732 CVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSPSKDASDESIIPXII 791 Query: 1000 PSSTSAT-----------------AIDPPTTIINEVXXXXXXXXXXXXXXXXXXXXXXXX 1128 SS +T + PT+ + Sbjct: 792 VSSNPSTLSFHGSNHSMASPNLTSTLTHPTSP-TDTPTTRXSREPVLEAEVXLPAQQQVV 850 Query: 1129 XXXHSMTTRRKQGIFKPK-VYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQ 1305 +TTR GI K K ++ + E PT +A KDP W +M +I AL + Sbjct: 851 VPPPRVTTRSMSGITKRKPIFNLAASKISE----PTTLKQAIKDPNWAEAMHTEIAALHK 906 Query: 1306 NGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVV 1485 N TW LV NIIGCKW++++K DG+++RYKARLVA+G+NQ G+DY + F+PVV Sbjct: 907 NQTWDLVDPPKDVNIIGCKWVYKLKYKXDGSVDRYKARLVARGFNQTFGLDYFETFSPVV 966 Query: 1486 KPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKS 1665 K TIR++++I L W++RQLD V+M QPPG+ P+ VCKLKK+ Sbjct: 967 KAATIRIVLTIXLSYRWELRQLD-------------VYMAQPPGFLHPNHPNKVCKLKKA 1013 Query: 1666 LYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXX 1845 LYGLKQ+PRAWF +LS L+ GF +S+TD+S+F L V++YVDDI+VTG Sbjct: 1014 LYGLKQSPRAWFTKLSSALLSXGFNSSRTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPI 1073 Query: 1846 XXXXXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYS 2025 FA++DLG+L +FLGI+ + + LHLSQ +YI++LL +T M SK + Sbjct: 1074 LIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDGGSLHLSQRKYITDLLQRTSMLDSKAAA 1133 Query: 2026 TP--FAPSTTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWT 2199 TP S + L + +YRSVVGALQYAT+TRPDIAF +NKACQ M PT HW+ Sbjct: 1134 TPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSINKACQFMHRPTSTHWS 1193 Query: 2200 AVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 +VKRILRYL+GT+ +GL + S+ IQ ++DAD DRRS+ G ++LG NL+SW Sbjct: 1194 SVKRILRYLKGTITHGLLLQPSAHFTIQAYTDADWGAQPDDRRSSSGYLVYLGNNLVSW 1252 Score = 198 bits (503), Expect(3) = 0.0 Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 1/196 (0%) Frame = +3 Query: 255 LDLIHSDVW-VSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQL 431 L+L+++D+W + + S +G KY++ F++ +SR+TW+Y L K + L F FK VENQ Sbjct: 541 LELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQF 600 Query: 432 QRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXXX 611 + KIK +Q D GGE+R+ ++L GI HR SCP+ +QNGR RKHRH+VET Sbjct: 601 EAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAH 660 Query: 612 XXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRPF 791 FWSYAF+TA FLINR+P+ L SP LF+ PDY FL FGC C P +RP+ Sbjct: 661 AGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPY 720 Query: 792 NAHKLEPRSVRCVCFG 839 N HKL+ RS++CV G Sbjct: 721 NNHKLQYRSLKCVFLG 736 Score = 107 bits (267), Expect(3) = 0.0 Identities = 54/119 (45%), Positives = 76/119 (63%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 +LG + SK K VSRSS E+EYR LA AT+E++W Q+LL EL P ++ DN Sbjct: 1244 YLGNNLVSWTASKQKVVSRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYDN 1303 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 + A Y+ NP+FH R KHIEI H++R+ V L++++I + DQ A+I K L+ SRF Sbjct: 1304 ISAYYMAKNPVFHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTSSRF 1362 Score = 67.4 bits (163), Expect = 7e-08 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDCTFTLSNVLHVPSITRNLIH--QFTKENNCFFEFH 176 D V +GNG L IS+ + L + +F L V HVP I+ NLI +F +NN EFH Sbjct: 369 DKVTIGNGKHLTISNTXFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFH 428 Query: 177 HDKFYVKDVITNKVLLTGPIRDGLYHLDLI 266 + F++KD+ T +VL G + +GLY +I Sbjct: 429 SNGFFLKDLHTKRVLAQGKLENGLYKFPVI 458 >emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] Length = 1319 Score = 426 bits (1096), Expect(2) = 0.0 Identities = 241/533 (45%), Positives = 324/533 (60%), Gaps = 17/533 (3%) Frame = +1 Query: 835 LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAK---IFQPEDSSNAAITS--VTVL 999 LGYS +KG+ + LTG++ I+ VVFDE FP AK + +D+S +T +T Sbjct: 678 LGYSLHNKGFLCLDFLTGRVYITPHVVFDEGQFPLAKTHPLSPTKDTSTDTLTPAIITSF 737 Query: 1000 P--------SSTSATAIDPPTTIINE-VXXXXXXXXXXXXXXXXXXXXXXXXXXXHSMTT 1152 P S TS+ + P T+ ++ V MTT Sbjct: 738 PFLTFCSNGSHTSSLSSSPSTSEASDSVSSPTVTPASSTLPEAIYEDQPPSPSPAPRMTT 797 Query: 1153 RRKQGIFKPK-VYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGTWQLVQ 1329 R +GI K K + V + E P +A KDP W +MD +I AL +N TW LV+ Sbjct: 798 RLMRGITKKKTILNLSVVKISE----PYTLKQALKDPNWIQAMDLEIAALHRNQTWDLVE 853 Query: 1330 ADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMI 1509 S N+IGCKW++++K DG+IERYKA+LVAKGYNQ G+DY + F+PVVK TIR+I Sbjct: 854 QPSEVNLIGCKWVYKLKHKPDGSIERYKAQLVAKGYNQTHGLDYFETFSPVVKAATIRII 913 Query: 1510 ISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAP 1689 ++++L W+IRQLDV NAFL+G L+E+V+M QPPGY D P VC+LKK+LYGLKQAP Sbjct: 914 LTMALSFQWEIRQLDVHNAFLNGELEEQVYMSQPPGYLDTTFPTKVCRLKKALYGLKQAP 973 Query: 1690 RAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXX 1869 RAWF RLS L+Q GF S+TD+S+F L V++YVDDI++TG Sbjct: 974 RAWFQRLSSALIQWGFSNSRTDSSMFLHFGESTTLIVLVYVDDIIITGCSSTQISSLIAK 1033 Query: 1870 XXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA--PS 2043 F ++DLG+L +FLGI+ S + ++LSQ +Y+S++LH+T+M +KP TP A + Sbjct: 1034 LDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDMLHRTEMFDTKPAKTPGAVGKN 1093 Query: 2044 TTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRY 2223 + + YRSVVGALQY TITR DIAF VNKACQ MQ PT AHW +VKRILRY Sbjct: 1094 LSKFDGDPMDEVTQYRSVVGALQYLTITRLDIAFAVNKACQFMQQPTSAHWLSVKRILRY 1153 Query: 2224 LQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISWFS 2382 LQGT+ GL S++L I+ FSDA+ + DRRS+ G ++LG NL+SW S Sbjct: 1154 LQGTMQDGLLLSPSTNLTIKGFSDANWGAQLDDRRSSNGYLVYLGGNLVSWSS 1206 Score = 244 bits (622), Expect(2) = 0.0 Identities = 135/338 (39%), Positives = 179/338 (52%), Gaps = 52/338 (15%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDCTFTLSNVLHVPSITRNLIH--QFTKENNCFFEFH 176 D V +GNG L+IS+ G+ L D +F L V HVP I+ NLI +F +NN EF Sbjct: 349 DKVTIGNGKHLSISNTGSHRLLXDSRSFHLKKVFHVPFISANLISVAKFCSDNNALIEFX 408 Query: 177 HDKFYVKDVITNKVLLTGPIRDGLYH---------------------------------- 254 + F+VKD+ T KVL G + +GLY Sbjct: 409 SNSFFVKDLHTKKVLAQGKLENGLYRFPVLNSKKSCNVSFEKNQNTVCSTVCSSCQLAKS 468 Query: 255 ---------------LDLIHSDVW-VSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEV 386 L+L+H+D+W + + S +G +Y++ F+N +S++TW YPL K + Sbjct: 469 HRLPTHLSLSCASKPLELVHTDLWGPASVKSTSGARYFILFLNDYSQYTWFYPLQTKDQA 528 Query: 387 LDTFIKFKTHVENQLQRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGR 566 L F KFK VENQ KIK +QSD GGE+R+ T+L GI HR SCP+ AQNGR R Sbjct: 529 LPAFKKFKLQVENQFDAKIKCLQSDNGGEFRSFKTFLQQTGIFHRFSCPYNSAQNGRVER 588 Query: 567 KHRHIVETCXXXXXXXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNF 746 KHRH+VET FW YAF+TA FLINR+P+ L SP TLFQ P+Y Sbjct: 589 KHRHVVETGLALLAHASLPMEFWQYAFQTATFLINRMPSKVLQNNSPYFTLFQKVPNYKS 648 Query: 747 LHTFGCACSPCLRPFNAHKLEPRSVRCVCFGLQPATQG 860 L FGC C P +RP N+HKL+ RSV+ + G +G Sbjct: 649 LRVFGCLCYPFIRPCNSHKLQYRSVQSLFLGYSLHNKG 686 Score = 107 bits (268), Expect = 5e-20 Identities = 52/119 (43%), Positives = 77/119 (64%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 +LG S +K K VS SS E+EY LA AT+E++W+Q+LL EL P P++W DN Sbjct: 1196 YLGGNLVSWSSTKQKVVSHSSAESEYCGLALATAEIIWMQALLQELCVPIPAIPLLWYDN 1255 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 + A ++ NP+FH R KHIEI H++R+ V +++ F+ T+DQ A++ K L+ SRF Sbjct: 1256 ISAYHMAKNPVFHARTKHIEIDLHFIRDQVIRGKIQLHFVPTEDQPADLLTKHLTSSRF 1314 >gb|KHN30958.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja] Length = 1237 Score = 352 bits (904), Expect(3) = e-170 Identities = 219/554 (39%), Positives = 286/554 (51%), Gaps = 47/554 (8%) Frame = +1 Query: 820 SGVCV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQ-------------- 954 S +CV +GYS Y +P TG+I SR V F E FP+ + Sbjct: 611 SAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQ 670 Query: 955 ---------PEDSSNAAIT-SVTVLP----SSTSAT----------------AIDPPTTI 1044 PEDSS A + S+T P SST T + PP TI Sbjct: 671 LSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPPPTSQSSPQLSAPPPQTI 730 Query: 1045 INEVXXXXXXXXXXXXXXXXXXXXXXXXXXXHSMTTRRKQGIFKPKVYAYEVQTVCEDII 1224 +N + TR K I KP + + I Sbjct: 731 VNP--------------------------NGGGIITRSKNNIIKP-IQKLNLHVQASSPI 763 Query: 1225 VPTCYTEACKDPKWRASMDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIE 1404 P T+A +DP WR++M + AL N TW LV S N++GCKW+FRIKRN DG+I+ Sbjct: 764 EPNTITQALRDPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSID 823 Query: 1405 RYKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHL 1584 RYKARLVAKG++Q S+ +GW IRQLDV NAFL G L Sbjct: 824 RYKARLVAKGFHQR------------------------SVRQGWPIRQLDVNNAFLQGTL 859 Query: 1585 QEEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSL 1764 +EEVFM+QPPG+ +K P HVC+LKK+LYGLKQAPRAW+ L FL+ GF S D SL Sbjct: 860 KEEVFMIQPPGFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRVFLLSLGFVNSTADASL 919 Query: 1765 FFRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNS 1944 F LY+++YVDDI++TG F++KDLG L +FLG++ ++ Sbjct: 920 FIYQKPEVTLYLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSA 979 Query: 1945 AGLHLSQEQYISNLLHKTKMTFSKPYSTPFAPST--TSHPSPLFEYHVLYRSVVGALQYA 2118 AG+ LSQ +YI +LLHK+ MT +KP STP + S L YR++VG+LQY Sbjct: 980 AGMFLSQRKYIIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYL 1039 Query: 2119 TITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDA 2298 ++TRPDIAF NK Q MQ+P AHW+A+KR+LRYL G+ G+ ++ L +SDA Sbjct: 1040 SLTRPDIAFSTNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDA 1099 Query: 2299 D*AGDITDRRSTGG 2340 D AGD D ST G Sbjct: 1100 DWAGDKDDYVSTTG 1113 Score = 174 bits (442), Expect(3) = e-170 Identities = 86/197 (43%), Positives = 115/197 (58%) Frame = +3 Query: 249 YHLDLIHSDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQ 428 Y L++I SDVW SP+ SI+G +YY F++ F+R+ W+YP+ KS+V F KFK+ VEN Sbjct: 422 YPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENF 481 Query: 429 LQRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXX 608 KIK + +D GGEY + +L N GI H + PH NG + R++RHI ET Sbjct: 482 YHHKIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLH 541 Query: 609 XXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRP 788 +W +A TA +LINRLPT L SP L PDY+ L FGC C P ++P Sbjct: 542 HSGLPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKP 601 Query: 789 FNAHKLEPRSVRCVCFG 839 + HKL P+S CV G Sbjct: 602 YANHKLAPKSAMCVFVG 618 Score = 125 bits (313), Expect(3) = e-170 Identities = 64/108 (59%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Frame = +2 Query: 2387 KHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRA-PVIWCDNMGATYLTANPI 2563 K ++V+RSSTEAEY+ALAD SE++W+ SL TEL H P A PVI+CDN+GAT L+ANP+ Sbjct: 1118 KQRSVARSSTEAEYKALADTASELLWVLSLFTELG-HMPTANPVIYCDNLGATNLSANPV 1176 Query: 2564 FHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 FH+RMKHI +A+H+VRE V V F+ST DQLA+I K L RF Sbjct: 1177 FHSRMKHIALAYHFVREHVQHGKFRVSFVSTNDQLADILTKPLLRPRF 1224 >gb|KHN45997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Glycine soja] Length = 1235 Score = 352 bits (904), Expect(3) = e-170 Identities = 219/554 (39%), Positives = 286/554 (51%), Gaps = 47/554 (8%) Frame = +1 Query: 820 SGVCV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQ-------------- 954 S +CV +GYS Y +P TG+I SR V F E FP+ + Sbjct: 609 SAMCVFVGYSADQHAYLCLDPTTGRIYTSRHVKFVESEFPFNSLVTHASPSPEQQTGPLQ 668 Query: 955 ---------PEDSSNAAIT-SVTVLP----SSTSAT----------------AIDPPTTI 1044 PEDSS A + S+T P SST T + PP TI Sbjct: 669 LSILQPMNPPEDSSPAPSSPSITNSPYMAQSSTEPTNPTQSPPPTSQSSPQLSAPPPQTI 728 Query: 1045 INEVXXXXXXXXXXXXXXXXXXXXXXXXXXXHSMTTRRKQGIFKPKVYAYEVQTVCEDII 1224 +N + TR K I KP + + I Sbjct: 729 VNP--------------------------NGGGIITRSKNNIIKP-IQKLNLHVQASSPI 761 Query: 1225 VPTCYTEACKDPKWRASMDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIE 1404 P T+A +DP WR++M + AL N TW LV S N++GCKW+FRIKRN DG+I+ Sbjct: 762 EPNTITQALRDPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWVFRIKRNPDGSID 821 Query: 1405 RYKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHL 1584 RYKARLVAKG++Q S+ +GW IRQLDV NAFL G L Sbjct: 822 RYKARLVAKGFHQR------------------------SVRQGWPIRQLDVNNAFLQGTL 857 Query: 1585 QEEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSL 1764 +EEVFM+QPPG+ +K P HVC+LKK+LYGLKQAPRAW+ L FL+ GF S D SL Sbjct: 858 KEEVFMIQPPGFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRVFLLSLGFVNSTADASL 917 Query: 1765 FFRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNS 1944 F LY+++YVDDI++TG F++KDLG L +FLG++ ++ Sbjct: 918 FIYQKPEVTLYLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCLSYFLGVEVIPSA 977 Query: 1945 AGLHLSQEQYISNLLHKTKMTFSKPYSTPFAPST--TSHPSPLFEYHVLYRSVVGALQYA 2118 AG+ LSQ +YI +LLHK+ MT +KP STP + S L YR++VG+LQY Sbjct: 978 AGMFLSQRKYIIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPNEYRTLVGSLQYL 1037 Query: 2119 TITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDA 2298 ++TRPDIAF NK Q MQ+P AHW+A+KR+LRYL G+ G+ ++ L +SDA Sbjct: 1038 SLTRPDIAFSTNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISATAPLTFHAYSDA 1097 Query: 2299 D*AGDITDRRSTGG 2340 D AGD D ST G Sbjct: 1098 DWAGDKDDYVSTTG 1111 Score = 174 bits (442), Expect(3) = e-170 Identities = 86/197 (43%), Positives = 115/197 (58%) Frame = +3 Query: 249 YHLDLIHSDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQ 428 Y L++I SDVW SP+ SI+G +YY F++ F+R+ W+YP+ KS+V F KFK+ VEN Sbjct: 420 YPLEIIFSDVWTSPILSIDGLRYYCMFVDHFTRYIWLYPMKRKSDVQTIFPKFKSLVENF 479 Query: 429 LQRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXX 608 KIK + +D GGEY + +L N GI H + PH NG + R++RHI ET Sbjct: 480 YHHKIKILYTDNGGEYIGLRPFLLNHGISHHTTPPHTPEHNGISERRNRHIAETGLSLLH 539 Query: 609 XXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRP 788 +W +A TA +LINRLPT L SP L PDY+ L FGC C P ++P Sbjct: 540 HSGLPLTYWPHAMTTAAYLINRLPTPILGYQSPYSKLLNISPDYHKLKCFGCLCFPWIKP 599 Query: 789 FNAHKLEPRSVRCVCFG 839 + HKL P+S CV G Sbjct: 600 YANHKLAPKSAMCVFVG 616 Score = 125 bits (313), Expect(3) = e-170 Identities = 64/108 (59%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Frame = +2 Query: 2387 KHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRA-PVIWCDNMGATYLTANPI 2563 K ++V+RSSTEAEY+ALAD SE++W+ SL TEL H P A PVI+CDN+GAT L+ANP+ Sbjct: 1116 KQRSVARSSTEAEYKALADTASELLWVLSLFTELG-HMPTANPVIYCDNLGATNLSANPV 1174 Query: 2564 FHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 FH+RMKHI +A+H+VRE V V F+ST DQLA+I K L RF Sbjct: 1175 FHSRMKHIALAYHFVREHVQHGKFRVSFVSTDDQLADILTKPLLRPRF 1222 >gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1460 Score = 425 bits (1093), Expect(2) = e-149 Identities = 222/417 (53%), Positives = 279/417 (66%), Gaps = 8/417 (1%) Frame = +1 Query: 1150 TRRKQGIFKPKVYAYEVQTVCEDIIV----PTCYTEACKDPKWRASMDEKITALLQNGTW 1317 TR + G+ K KVY PT EA KD W+ +MD + AL++N TW Sbjct: 915 TRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNKTW 974 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV G NIIGCKW+++IKR DGT++RYKARLVAKG+ Q GIDY+D F+PVVK T Sbjct: 975 HLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1034 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+I+S+++ KGW +RQLDV+NAFLHG+L+EEV+M+QPPG+ D PHHVCKL K+LYGL Sbjct: 1035 IRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGL 1094 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAWF RLS+ LM GF+ SK DTSLFF ++V++YVDDI+V Sbjct: 1095 KQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAA 1154 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 EFA+KDLGELH+FLGI+ S+ G+ L+Q++Y ++LL K M KP +TP + Sbjct: 1155 LLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 1214 Query: 2038 PS--TTSHPSPLF--EYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAV 2205 S + H L E YRSVVGALQY T+TRPDIAF VNK CQ + +PT HW AV Sbjct: 1215 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAV 1274 Query: 2206 KRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 KRILRYL+ GL+ S S + FSDAD AG + DRRSTGG IFLG+NL+SW Sbjct: 1275 KRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSW 1331 Score = 135 bits (341), Expect(2) = e-149 Identities = 64/115 (55%), Positives = 86/115 (74%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTE+EY+A+A+AT+E++W+Q+LL EL SP+A IWCDN Sbjct: 1323 FLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDN 1382 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLS 2695 +GA YL+ANP+FH R KHIE+ +H+VRE V+ LE+ F+ST DQ+A+ F K LS Sbjct: 1383 LGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLS 1437 Score = 214 bits (544), Expect = 5e-52 Identities = 101/202 (50%), Positives = 131/202 (64%) Frame = +3 Query: 255 LDLIHSDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQLQ 434 L+L+ SDVW S+ KYYVSFI+ FS+FTW+Y + +KS+V D F +F+ VE Q Sbjct: 509 LELVFSDVWGPAPESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFD 568 Query: 435 RKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXXXX 614 RKI +Q+DWGGEY++++++ GI H VSCPH H QNG A RKHRHIVE Sbjct: 569 RKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHA 628 Query: 615 XXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRPFN 794 FW AF+ A +LINR+P+ +H +SPLE LF+ PDY+ L FGCAC P LRP+N Sbjct: 629 SMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYN 688 Query: 795 AHKLEPRSVRCVCFGLQPATQG 860 HKL+ RS RCV G +G Sbjct: 689 NHKLQFRSKRCVFLGFSTMHKG 710 Score = 64.7 bits (156), Expect = 4e-07 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDC-TFTLSNVLHVPSITRNLI--HQFTKENNCFFEF 173 + + +G+G++ISHIG +I+ + + L NVL+VP +NL+ H+ +N+ F E Sbjct: 347 EQIHTASGAGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLEL 406 Query: 174 HHDKFYVKDVITNKVLLTGPIRDGLYHL 257 H D F++KD IT K LL G LY L Sbjct: 407 HRDYFFLKDQITRKTLLKGRSWRRLYPL 434 >gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group] gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1256 Score = 416 bits (1069), Expect(2) = e-144 Identities = 224/480 (46%), Positives = 297/480 (61%), Gaps = 7/480 (1%) Frame = +1 Query: 958 EDSSNAAITSVTVLPSSTSATAIDPPTTIINEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1137 + S++ + S + P+S S+ A P T+ N Sbjct: 668 DSSTHESSISASASPASQSSVATAPEATLPNP-------QQHQQALRSSTPEGEASRPVT 720 Query: 1138 HSMTTRRKQGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGTW 1317 H RK+ I+ + Y T + P +A D W+ +MD K TALL N TW Sbjct: 721 HLQKGIRKEKIYTDRTVKYGCLTTTGE---PRDLHDALHDTNWKHAMDAKFTALLHNKTW 777 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV G NII KW+++IKR DG+++RYKARLVAKG+ Q GIDY+D F+PVVK T Sbjct: 778 HLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 837 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+I+SI++ +GW +RQLDV+NAFLHG L+EEV+M QPPGY DK+ P +VCKL K+LYGL Sbjct: 838 IRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGL 897 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAW+ +LSQ L GFQ SK DTSLFF ++V++YVDDI+V Sbjct: 898 KQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPA 957 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 ++FA+KDLG+LH+FLGI+ ++ S+G+ L+QE+Y+++LL + MT KP STP Sbjct: 958 LLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPL- 1016 Query: 2038 PSTTSHPSPLFEYHVL-------YRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHW 2196 +TS L E +L YRSVVGALQY T+TRPDI F VNK CQ + +PT HW Sbjct: 1017 --STSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHW 1074 Query: 2197 TAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 A+KRILRYL+ GL+ S S+ + +SDAD AG+I DRRSTGG +FLG NL+SW Sbjct: 1075 AAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSW 1134 Score = 127 bits (318), Expect(2) = e-144 Identities = 63/115 (54%), Positives = 82/115 (71%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TV RSSTE+EY+ALA+AT+E++WIQ+LL ELS SP +WCDN Sbjct: 1126 FLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDN 1185 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLS 2695 +GA YL++NP+FH R KHIE+ +H+VRE + LEV FI T DQ+A+ F K LS Sbjct: 1186 LGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKALS 1240 Score = 207 bits (527), Expect = 4e-50 Identities = 102/204 (50%), Positives = 126/204 (61%) Frame = +3 Query: 270 SDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQLQRKIKY 449 +DVW + G KYYVSFI++FSRFTW+Y L YKSEV F +F+ VE RKI Sbjct: 349 ADVWGPAPVAGGGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKIIS 408 Query: 450 VQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXXXXXXXXX 629 +Q+DWGGEY+ ++T+ + GI H VSCPH H QNG A RKHRHIVE Sbjct: 409 MQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLK 468 Query: 630 FWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRPFNAHKLE 809 FW A+++ +LINR+PT L SPLE LF+ PDY L TFGCAC P LRP+N+HK+ Sbjct: 469 FWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMH 528 Query: 810 PRSVRCVCFGLQPATQGV*IFQSS 881 RS RC G P +G SS Sbjct: 529 FRSKRCTFLGYSPLHKGFRCLDSS 552 >gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] Length = 1621 Score = 426 bits (1094), Expect(2) = e-144 Identities = 222/417 (53%), Positives = 279/417 (66%), Gaps = 8/417 (1%) Frame = +1 Query: 1150 TRRKQGIFKPKVYAYEVQTVCEDIIV----PTCYTEACKDPKWRASMDEKITALLQNGTW 1317 TR + G+ K KVY PT EA KD W+ +MD + AL++N TW Sbjct: 637 TRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNKTW 696 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV G NIIGCKW+++IKR DGT++RYKARLVAKG+ Q GIDY+D F+PVVK T Sbjct: 697 HLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 756 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+I+S+++ KGW +RQLDV+NAFLHG+L+EEV+M+QPPG+ D PHHVCKL K+LYGL Sbjct: 757 IRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGL 816 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAWF RLS+ LM GF+ SK DTSLFF ++V++YVDDI+V Sbjct: 817 KQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAA 876 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 EFA+KDLGELH+FLGI+ S+ G+ L+Q++Y ++LL K M KP +TP + Sbjct: 877 LLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 936 Query: 2038 PS--TTSHPSPLF--EYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAV 2205 S + H L E YRSVVGALQY T+TRPDIAF VNK CQ + +PT HW AV Sbjct: 937 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAV 996 Query: 2206 KRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 KRILRYL+ GL+ S S + FSDAD AG + DRRSTGG IFLG+NL+SW Sbjct: 997 KRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSW 1053 Score = 115 bits (289), Expect(2) = e-144 Identities = 53/103 (51%), Positives = 75/103 (72%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTE+EY+A+A+AT+E++W+Q+LL EL SP+A IWCDN Sbjct: 1045 FLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDN 1104 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQ 2659 +GA YL+ANP+FH R KHIE+ +H+VRE + + + + F +Q Sbjct: 1105 LGAKYLSANPVFHARTKHIEVDYHFVRERLLSRFINLGFGCSQ 1147 >gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1478 Score = 424 bits (1090), Expect(2) = e-142 Identities = 215/387 (55%), Positives = 270/387 (69%), Gaps = 4/387 (1%) Frame = +1 Query: 1228 PTCYTEACKDPKWRASMDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIER 1407 PT EA KD W+ +MD + AL++N TW LV G NIIGCKW+++IKR DGT++R Sbjct: 938 PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 997 Query: 1408 YKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQ 1587 YKARLVAKG+ Q GIDY+D F+PVVK TIR+I+S+++ KGW +RQLDV+NAFLHG+L+ Sbjct: 998 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 1057 Query: 1588 EEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLF 1767 EEV+M+QPPG+ D PHHVCKL K+LYGLKQAPRAWF RLS+ LM GF+ SK DTSLF Sbjct: 1058 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 1117 Query: 1768 FRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNSA 1947 F ++V++YVDDI+V EFA+KDLGELH+FLGI+ S+ Sbjct: 1118 FLNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1177 Query: 1948 GLHLSQEQYISNLLHKTKMTFSKPYSTPFAPS--TTSHPSPLF--EYHVLYRSVVGALQY 2115 G+ L+Q++Y ++LL K M KP +TP + S + H L E YRSVVGALQY Sbjct: 1178 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 1237 Query: 2116 ATITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSD 2295 T+TRPDIAF VNK CQ + +PT HW AVKRILRYL+ GL+ S S + FSD Sbjct: 1238 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD 1297 Query: 2296 AD*AGDITDRRSTGGMTIFLGTNLISW 2376 AD AG + DRRSTGG IFLG+NL+SW Sbjct: 1298 ADWAGCLDDRRSTGGFAIFLGSNLVSW 1324 Score = 112 bits (280), Expect(2) = e-142 Identities = 50/88 (56%), Positives = 67/88 (76%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSS E+EY+A+A+AT+E++W+Q+LL EL SP+A IWCDN Sbjct: 1316 FLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDN 1375 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRE 2614 +GA YL+ANP+FH R KHIE+ +H+VRE Sbjct: 1376 LGAKYLSANPVFHARTKHIEVDYHFVRE 1403 Score = 219 bits (558), Expect = 1e-53 Identities = 122/295 (41%), Positives = 167/295 (56%), Gaps = 9/295 (3%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDC-TFTLSNVLHVPSITRNLI--HQFTKENNCFFEF 173 + + +G+G++ISHIG +I+ + + L NVL+VP +NL+ H+ +N+ F E Sbjct: 463 EQIHTASGAGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLEL 522 Query: 174 HHDKFYVKDVITNKVLLTGPIRDGLYHLDLIHSDVWVSPLCSINGFKYYVSFINSFSRFT 353 H D F++KD IT K LL G LY L HS + + Y + S R Sbjct: 523 HRDYFFLKDQITRKTLLKGRSWRRLYPLP--HSSLKQA----------YSAIKLSLDR-- 568 Query: 354 WVYPLAY------KSEVLDTFIKFKTHVENQLQRKIKYVQSDWGGEYRNVSTYLDNCGIG 515 W + L + KS+V D F +F+ VE Q RKI +Q+DWGGEY++++++ GI Sbjct: 569 WHHRLGHPSITTHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIV 628 Query: 516 HRVSCPHAHAQNGRAGRKHRHIVETCXXXXXXXXXXXXFWSYAFETANFLINRLPTLTLH 695 H VSCPH H QNG A RKHRHIVE FW AF+ A +LINR+P+ +H Sbjct: 629 HHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQAATYLINRVPSRVIH 688 Query: 696 QLSPLETLFQTPPDYNFLHTFGCACSPCLRPFNAHKLEPRSVRCVCFGLQPATQG 860 +SPLE LF+ PDY+ L FGCAC P LRP+N HKL+ RS RCV G +G Sbjct: 689 NISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKG 743 >gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1180 Score = 406 bits (1043), Expect(2) = e-141 Identities = 214/420 (50%), Positives = 275/420 (65%), Gaps = 11/420 (2%) Frame = +1 Query: 1150 TRRKQGIFKPKVYAYEVQTVCEDIIV----PTCYTEACKDPKWRASMDEKITALLQNGTW 1317 TR ++GI K K+Y + TV + P EA D W+ +MD + TALL N TW Sbjct: 538 TRLQKGIRKEKIYTDD--TVKYGFLTTTGEPRDLAEALHDTNWKHAMDAEFTALLHNKTW 595 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV G N++ CKW+++IKR DG+++RYK RLVAKG Q GIDY+D F+PVVK T Sbjct: 596 HLVPPQKGKNVMDCKWVYKIKRKQDGSLDRYKVRLVAKGIKQRYGIDYEDTFSPVVKAAT 655 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+++SI++ +GW +RQLDV NAFLHG L+EEV+M QPPGY DK P +CKL K+LYGL Sbjct: 656 IRLVLSIAVSRGWTLRQLDVHNAFLHGILEEEVYMKQPPGYEDKANPGCICKLDKALYGL 715 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAW+ RLSQ L Q GFQ SK DTSLFF ++V+IYVDDI+V Sbjct: 716 KQAPRAWYARLSQKLQQLGFQGSKADTSLFFYNKQGLTIFVLIYVDDIIVASSRQDAVLT 775 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 +EFA+KDLG+LH+FLGI+ ++ S G+ L+QE+Y ++LL + M KP S A Sbjct: 776 LLQDLQKEFALKDLGDLHYFLGIEVNKISNGIILTQEKYANDLLKRVGMIDCKPVS---A 832 Query: 2038 PSTTSHPSPLFEYHVL-------YRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHW 2196 +TS L E +L YRSVVGALQY T+TRPDIAF VNK CQ + +PT HW Sbjct: 833 SLSTSEKLTLHEGDLLGLNDASNYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTIHW 892 Query: 2197 TAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 VKRILRYL+ GL+ S S+ + +SD D AG++ DRRST G +FLG NL+SW Sbjct: 893 ATVKRILRYLKQCTKLGLKISKSKSMLVSGYSDTDWAGNVDDRRSTRGFAVFLGDNLVSW 952 Score = 126 bits (316), Expect(2) = e-141 Identities = 62/115 (53%), Positives = 81/115 (70%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTE+EY+ LA+AT+E++WIQ+LL EL SP +WCDN Sbjct: 944 FLGDNLVSWNARKQATVSRSSTESEYKVLANATAEIMWIQTLLAELGVSSPLMARLWCDN 1003 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLS 2695 +GA YL++NP+FH R KHIE+ +H+VRE V LEV F+ T DQ+A+ F K LS Sbjct: 1004 LGAKYLSSNPVFHARTKHIEVDYHFVRERVQRRLLEVDFVPTGDQVADGFTKALS 1058 >gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii] Length = 3041 Score = 398 bits (1022), Expect(2) = e-140 Identities = 209/418 (50%), Positives = 271/418 (64%), Gaps = 9/418 (2%) Frame = +1 Query: 1150 TRRKQGIFKPKVYAYEVQ-----TVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGT 1314 TR ++G+ +P Y + T E P EA D +W+ +M+E+ L +N T Sbjct: 2248 TRLQKGVIQPVNYKQITKFGLACTTGE----PGTLDEALGDTRWKKAMEEEYMTLQKNKT 2303 Query: 1315 WQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPT 1494 W LV G N+I CKW++RIKR DGTI+RYKARLVAKG+ Q GIDY+D F+PVVK Sbjct: 2304 WHLVSPRRGKNLIDCKWVYRIKRKSDGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAA 2363 Query: 1495 TIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYG 1674 TIR+++SI++ +GW +RQLDV+NAFLHG L+EEV+M QPPG+ +K P HVCKL +LYG Sbjct: 2364 TIRLVLSIAVSRGWSLRQLDVQNAFLHGVLKEEVYMKQPPGFENKDKPFHVCKLDNALYG 2423 Query: 1675 LKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXX 1854 LKQAPRAW+ LSQ L GF SK+DTSLF ++V+IYVDDI+VT Sbjct: 2424 LKQAPRAWYSHLSQKLQALGFVPSKSDTSLFIYNKLKTSIFVLIYVDDIIVTSSSNEAVT 2483 Query: 1855 XXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPF 2034 EFA+KDLG+LHFFLGI+ + GLHLSQE+Y ++L+ + + K TP Sbjct: 2484 GSLKDLSAEFALKDLGDLHFFLGIEVKKTEDGLHLSQEKYAADLVRRAGLQGCKASPTPL 2543 Query: 2035 APS--TTSHPSPLF--EYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTA 2202 + + + L E YRS+VGALQY T+TRPDI+F VNK CQ + +PT H TA Sbjct: 2544 SSTEKLSLEEGDLLGQEDSTRYRSLVGALQYLTLTRPDISFAVNKVCQFLHAPTTVHLTA 2603 Query: 2203 VKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISW 2376 KRI+RY++ T+ GL F SSS + FSD+D AG I DRRSTGG +F G NLISW Sbjct: 2604 AKRIVRYVKNTMSLGLTFTKSSSTLVSAFSDSDWAGCIDDRRSTGGFAVFFGPNLISW 2661 Score = 130 bits (326), Expect(2) = e-140 Identities = 58/108 (53%), Positives = 81/108 (75%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 F G + K TVSRSSTEAEY+ALA+AT+E++W+QS+L EL + P +WCDN Sbjct: 2653 FFGPNLISWCVKKQATVSRSSTEAEYKALANATAEIIWVQSMLRELGVKHTKTPCLWCDN 2712 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLAN 2674 +GATYL+ANP+FH R KHI+I FH+VRE VA L++RF+ ++DQ+++ Sbjct: 2713 LGATYLSANPVFHARTKHIKIDFHFVRERVARRQLDIRFVHSRDQVSS 2760 >emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] Length = 1074 Score = 417 bits (1072), Expect(2) = e-139 Identities = 239/569 (42%), Positives = 323/569 (56%), Gaps = 24/569 (4%) Frame = +1 Query: 748 YIHLVVPVLHVSDHLMLIN*N--QGLSGVCV-LGYSQLHKGYRSFNPLTGKIIISRDVVF 918 Y H V HL +N N Q S C+ LGY+ HKGY NP T ++ ISR VVF Sbjct: 371 YFHFKVFGCLCYPHLKHLNSNKFQPRSTPCIFLGYAPSHKGYLCLNPTTNRVYISRHVVF 430 Query: 919 DEHVFPYAKIFQPEDSS-NAAITSVTVLP----------SSTSATAIDPPTT------II 1047 E FP+ + P S + +T LP SS AT +P T + Sbjct: 431 AETTFPFQALSPPSQQSYHIPVTPAFPLPPSPILFPPTTSSPLATPSEPAPTSPPANSLS 490 Query: 1048 NEVXXXXXXXXXXXXXXXXXXXXXXXXXXXHSMTTRRKQGIFKPKVYAYEVQTVCEDIIV 1227 H M TR K GI K K Y + I Sbjct: 491 LPPLIHVPFVDEAAETPTTSLQDSTAPIPGHPMITRSKSGICKKKTYLTSLT------IE 544 Query: 1228 PTCYTEACKDPKWRASMDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIER 1407 P + +DP W+ +M+++ ALL+N TW LV S II CKW+F++K +G+I+R Sbjct: 545 PRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDR 604 Query: 1408 YKARLVAKGYNQVEGIDYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQ 1587 YKARLVA+G++Q GID+ + F+PVVKP TIR+++SI++ W I+QLDV NAFL+G LQ Sbjct: 605 YKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQ 664 Query: 1588 EEVFMVQPPGYADKLLPHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLF 1767 E+VFM+QPPG+ D P HVC+L+K+LYGLKQ PRAWF +LS FL+Q GFQ S+ + SLF Sbjct: 665 EQVFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLF 724 Query: 1768 FRVTCFEDLYVIIYVDDILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNSA 1947 + + + + ++IYVDDIL+TG FA++DLG++ +FLGI+ +R S Sbjct: 725 YFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLGDISYFLGIKVTRLSH 784 Query: 1948 GLHLSQEQYISNLLHKTKMTFSKPYSTPFAPSTTSHPSPLFEYHVL----YRSVVGALQY 2115 LHL+Q+ YI LL + + +K STP A + VL YRS+VGALQY Sbjct: 785 ALHLNQQHYIHQLLERANLHEAKSASTPGALGKLLSAADGEPLSVLDATHYRSLVGALQY 844 Query: 2116 ATITRPDIAFVVNKACQHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSD 2295 T+TRP+I+F VN+ACQ+M PT +H A KRILRYL+GT +G+ S SL +Q ++D Sbjct: 845 ITLTRPEISFAVNRACQYMARPTTSHLQAAKRILRYLKGTATHGISIHASPSLSLQGYTD 904 Query: 2296 AD*AGDITDRRSTGGMTIFLGTNLISWFS 2382 D A D+RST G +F TNLISW S Sbjct: 905 VDWASCPDDKRSTSGFCLFFCTNLISWSS 933 Score = 109 bits (272), Expect(2) = e-139 Identities = 54/111 (48%), Positives = 73/111 (65%) Frame = +2 Query: 2378 SLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDNMGATYLTAN 2557 S +K + VSRSS E+EY ALA +EV W+Q LL EL P+IWCDN+ AT L AN Sbjct: 932 SSTKQRVVSRSSAESEYWALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAAN 991 Query: 2558 PIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRFA 2710 +FH R KHIEI FH+VR+ V L ++++ + DQLAN+F K + +F+ Sbjct: 992 SVFHARSKHIEIDFHFVRDKVLHKELLIQYVPSTDQLANVFTKHVPSCQFS 1042 Score = 89.0 bits (219), Expect = 2e-14 Identities = 44/109 (40%), Positives = 57/109 (52%) Frame = +3 Query: 534 HAHAQNGRAGRKHRHIVETCXXXXXXXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLE 713 H QNGR K RH+VET FW YAF T LIN +P+ L+ SP Sbjct: 303 HVVEQNGRVECKMRHVVETGLTLLYTATLPSKFWPYAFTTTVTLINCMPSPLLNYSSPFS 362 Query: 714 TLFQTPPDYNFLHTFGCACSPCLRPFNAHKLEPRSVRCVCFGLQPATQG 860 L++ PPDY FGC C P L+ N++K +PRS C+ G P+ +G Sbjct: 363 LLYKHPPDYFHFKVFGCLCYPHLKHLNSNKFQPRSTPCIFLGYAPSHKG 411 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 395 bits (1014), Expect(2) = e-138 Identities = 208/421 (49%), Positives = 277/421 (65%), Gaps = 12/421 (2%) Frame = +1 Query: 1150 TRRKQGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDP----KWRASMDEKITALLQNGTW 1317 TR + GI K KVY TV ++ T E +D W+ +MD + AL++N TW Sbjct: 895 TRLQSGIRKEKVYTDG--TVKWGMLTSTGEPENLQDALQNNNWKCAMDAEYMALIKNNTW 952 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV G N+I CKW+++IKR DG+++RYKARLVAKG+ Q GIDY+D F+PVVK T Sbjct: 953 HLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1012 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+I+SI++ +GW +RQLDV+NAFLHG L+EEV+M QPPGY + P +VCKL K+LYGL Sbjct: 1013 IRIILSIAVSRGWCLRQLDVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVCKLDKALYGL 1072 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAW+ RLS L GF+ SK DTSLFF ++++IYVDDI+V Sbjct: 1073 KQAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSA 1132 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 +EFA+KDLG+LH+FLGI+ ++ G+ +SQE+Y S+LL + M+ K +TP + Sbjct: 1133 LLQDLQKEFALKDLGDLHYFLGIEVTKIPGGILMSQEKYASDLLKRVNMSDCKSVATPLS 1192 Query: 2038 PS--------TTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAH 2193 S T P+ + YRS+VGALQY T+TR DIAF VNK CQ + +PT H Sbjct: 1193 ASEKLIAGKGTILGPNDATQ----YRSIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTEH 1248 Query: 2194 WTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLIS 2373 W AVKRILRY++ G GL+ SSS+ + +SDAD AG + DRRSTGG ++LG NL+S Sbjct: 1249 WAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVS 1308 Query: 2374 W 2376 W Sbjct: 1309 W 1309 Score = 129 bits (323), Expect(2) = e-138 Identities = 62/114 (54%), Positives = 83/114 (72%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 +LG + K TVSRSSTEAEY+ALA+AT+E++W+Q+LL EL+ SP +WCDN Sbjct: 1301 YLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDN 1360 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGL 2692 MGA YL+ NP+FH R KHIE+ +H+VRE VA L+V ++ST DQ+A+ F K L Sbjct: 1361 MGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 1414 Score = 209 bits (532), Expect = 1e-50 Identities = 102/204 (50%), Positives = 126/204 (61%) Frame = +3 Query: 249 YHLDLIHSDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQ 428 Y L+L+ SDVW S+ KYYVSFI+ +S+FTW+Y L YKSEV D F +F++ VE Sbjct: 511 YPLELVFSDVWGPAPQSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERL 570 Query: 429 LQRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXX 608 RKI +Q+DWGGEY+ + ++ + GI H VSCPH H QNG A RKHRHIVE Sbjct: 571 FNRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLA 630 Query: 609 XXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRP 788 FW AF +A +LINR P+ LH +SPLE L PDYN L FGCAC P LRP Sbjct: 631 YSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRP 690 Query: 789 FNAHKLEPRSVRCVCFGLQPATQG 860 +N HKL+ RS C G +G Sbjct: 691 YNKHKLQFRSTTCTFLGYSTLHKG 714 Score = 65.5 bits (158), Expect = 3e-07 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDCTFTLSNVLHVPSITRNLI--HQFTKENNCFFEFH 176 D V +G+G+ ISHIG S++K L +VL+VP +NL+ ++ T +N F E + Sbjct: 346 DQVHTASGAGMEISHIGNSVVKTPSRNLHLKDVLYVPKANKNLVSAYKLTSDNLAFIELY 405 Query: 177 HDKFYVKDVITNKVLLTGPIRDGLYHL 257 F++KD+ + LL G GLY L Sbjct: 406 RKFFFIKDLAMRRTLLRGRCHKGLYAL 432 >ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) [Oryza sativa Indica Group] gi|289065044|ref|YP_003433855.1| hypothetical protein OrrupM_p18 (mitochondrion) [Oryza rufipogon] gi|74100111|gb|AAZ99275.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical protein (mitochondrion) [Oryza sativa Japonica Group] gi|74100220|gb|AAZ99382.1| hypothetical protein (mitochondrion) [Oryza sativa Japonica Group] gi|285026126|dbj|BAI67959.1| hypothetical protein (mitochondrion) [Oryza rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|353685219|gb|AER12982.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|353685288|gb|AER13050.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|374277649|gb|AEZ03755.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|374277659|gb|AEZ03764.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group] gi|528540457|dbj|BAN67511.1| hypothetical protein (mitochondrion) [Oryza rufipogon] gi|528540460|dbj|BAN67513.1| hypothetical protein (mitochondrion) [Oryza rufipogon] Length = 490 Score = 397 bits (1021), Expect(2) = e-136 Identities = 203/371 (54%), Positives = 256/371 (69%), Gaps = 4/371 (1%) Frame = +1 Query: 1276 MDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGI 1455 MDE+ AL++N TW LV A G N+I CKW+++IKR DGTI+RYKARLVAKG+ Q GI Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60 Query: 1456 DYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLL 1635 DY++ F+PVVK TIR+I+S+++ GW +RQLDV+NAFLHG L+E+V+M QPPGY DK Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSK 120 Query: 1636 PHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVD 1815 +VCKL K+LYGLKQAPRAWF RLS L GFQ SK D SLFF ++V+IYVD Sbjct: 121 LDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIYVD 180 Query: 1816 DILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHK 1995 DI+V EFA+KDLG LH+FLGI+ ++ G+ L+QE+Y ++LL + Sbjct: 181 DIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKVHDGIILTQEKYATDLLKR 240 Query: 1996 TKMTFSKPYSTPFAPS---TTSHPSPL-FEYHVLYRSVVGALQYATITRPDIAFVVNKAC 2163 M K +TP + + PL E YRS+VGALQY T+TRPDIAF VNK C Sbjct: 241 VGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGALQYLTLTRPDIAFPVNKVC 300 Query: 2164 QHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGM 2343 Q++ +PT HWTAVKRILRYL+G+LG GL+ S S + FSDAD AG DR+STGG Sbjct: 301 QYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADWAGCPDDRKSTGGF 360 Query: 2344 TIFLGTNLISW 2376 +FLG NLISW Sbjct: 361 AVFLGANLISW 371 Score = 120 bits (301), Expect(2) = e-136 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTEAEY+ALA+AT+E++ +Q+LL E PRA +WCDN Sbjct: 363 FLGANLISWNAWKQATVSRSSTEAEYKALANATAEIISVQTLLKERGIAQPRAACLWCDN 422 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIF 2680 +GAT L+ANP+FH R KHIE+ +H+VRE V+ L++RF+ + DQ+A+ F Sbjct: 423 IGATSLSANPVFHARTKHIEVDYHFVRERVSQGLLDIRFVPSGDQVADGF 472 >ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonica Group] gi|23495377|dbj|BAC19858.1| orf490 (mitochondrion) [Oryza sativa Japonica Group] Length = 490 Score = 394 bits (1013), Expect(2) = e-136 Identities = 201/371 (54%), Positives = 255/371 (68%), Gaps = 4/371 (1%) Frame = +1 Query: 1276 MDEKITALLQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGI 1455 MDE+ AL++N TW LV A G N+I CKW+++IKR DGTI+RYKARLVAKG+ Q GI Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60 Query: 1456 DYQDRFNPVVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLL 1635 DY++ F+PVVK TIR+I+S+++ GW +RQLDV+NAFLHG L+E+V+M QPPGY DK Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSK 120 Query: 1636 PHHVCKLKKSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVD 1815 +VCKL K+LYGL+ APRAWF RLS L GFQ SK D SLFF ++V+IYVD Sbjct: 121 LDYVCKLDKALYGLRHAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIYVD 180 Query: 1816 DILVTGXXXXXXXXXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHK 1995 DI+V EFA+KDLG LH+FLGI+ ++ G+ L+QE+Y ++LL + Sbjct: 181 DIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKVHDGIILTQEKYATDLLKR 240 Query: 1996 TKMTFSKPYSTPFAPS---TTSHPSPL-FEYHVLYRSVVGALQYATITRPDIAFVVNKAC 2163 M K +TP + + PL E YRS+VGALQY T+TRPDIAF VNK C Sbjct: 241 VGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGALQYLTLTRPDIAFPVNKVC 300 Query: 2164 QHMQSPTEAHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGM 2343 Q++ +PT HWTAVKRILRYL+G+LG GL+ S S + FSDAD AG DR+STGG Sbjct: 301 QYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADWAGCPDDRKSTGGF 360 Query: 2344 TIFLGTNLISW 2376 +FLG NLISW Sbjct: 361 AVFLGANLISW 371 Score = 120 bits (301), Expect(2) = e-136 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTEAEY+ALA+AT+E++ +Q+LL E PRA +WCDN Sbjct: 363 FLGANLISWNAWKQATVSRSSTEAEYKALANATAEIISVQTLLKERGIAQPRAACLWCDN 422 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIF 2680 +GAT L+ANP+FH R KHIE+ +H+VRE V+ L++RF+ + DQ+A+ F Sbjct: 423 IGATSLSANPVFHARTKHIEVDYHFVRERVSQGLLDIRFVPSGDQVADGF 472 >gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group] Length = 1803 Score = 377 bits (967), Expect(2) = e-135 Identities = 211/538 (39%), Positives = 292/538 (54%), Gaps = 18/538 (3%) Frame = +1 Query: 829 CV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNA---------- 975 CV +GY H+GYR ++ ++ ++ SR V F E VFP+ P S+ Sbjct: 747 CVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVFPFRDAPSPRPSAPPPPDHGDDTIV 806 Query: 976 -----AITSVTVLPSSTSATAIDPPTTIINEVXXXXXXXXXXXXXXXXXXXXXXXXXXXH 1140 A VT + ++ + A PP+ + H Sbjct: 807 LLPAPAQHVVTPVGTAPAHDAASPPSPASSTPSSAAPAHDVAPPPSPETSSPASASPPRH 866 Query: 1141 SMTTRRKQGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGTWQ 1320 +MTTR + GI KP Y + P+ A +DP WRA+M + ALL N TW Sbjct: 867 AMTTRARAGISKPNP-RYAMTATSTLSPTPSSVRVALRDPNWRAAMQAEFDALLANRTWT 925 Query: 1321 LVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTTI 1500 LV G II KW+F+ K + DG++++YKAR V +G+NQ G+D+ + F+PVVKP TI Sbjct: 926 LVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVDFGETFSPVVKPATI 985 Query: 1501 RMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGLK 1680 R ++++ K W QLDV NAFLHGHLQE V QP G+ D P VC L +SLYGL+ Sbjct: 986 RTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARPADVCLLSRSLYGLR 1045 Query: 1681 QAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXXX 1860 QAPRAWF R + GF S+ D SLF + Y+++YVDD++++ Sbjct: 1046 QAPRAWFKRFADHATSLGFVQSRADPSLFVLRRGSDTAYLLLYVDDMILSASSSSLLQRI 1105 Query: 1861 XXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTP--F 2034 EF +KD+G L +FLGI+ R + G LSQ +Y +++L + M K +TP Sbjct: 1106 IDRLQAEFKVKDMGPLKYFLGIEVQRTADGFVLSQSKYATDVLERAGMANCKAVATPADA 1165 Query: 2035 APSTTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAVKRI 2214 P +S PLF+ YRS+ GALQY T+TRPDIA+ V + C HM +P EAH T +KRI Sbjct: 1166 KPKLSSDEGPLFQDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRI 1225 Query: 2215 LRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISWFSQQ 2388 LRY++GT +GL + S+S + FSDAD AG RRST G IFLG +LISW S++ Sbjct: 1226 LRYIKGTAAFGLHLRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKR 1283 Score = 137 bits (345), Expect(2) = e-135 Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 2/200 (1%) Frame = +3 Query: 246 LYHLDLIHSDVWVSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVEN 425 L+ L+H+DVW SP+ S +G+KYYV F++ F+ + W +P+ KSEV T F + Sbjct: 552 LFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHT 611 Query: 426 QLQRKIKYVQSDWGGEYRNVS--TYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXX 599 Q + +Q+D G EY + + + L G R+SCP++ QNG+A R R I + Sbjct: 612 QFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGKAERILRTINDCVRT 671 Query: 600 XXXXXXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPC 779 FW+ A +TA LINR P L P + L PP Y+ L FGC C P Sbjct: 672 MLVHSAAPLSFWAEALQTAMHLINRRPCRATGSLKPYQLLLGAPPTYDHLRVFGCLCYPN 731 Query: 780 LRPFNAHKLEPRSVRCVCFG 839 HKL PRS+ CV G Sbjct: 732 TIATAPHKLSPRSLACVFIG 751 Score = 106 bits (265), Expect = 1e-19 Identities = 54/119 (45%), Positives = 74/119 (62%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + S + TVSRSS EAEYR +A+A +E W++ LL EL P+A + +CDN Sbjct: 1271 FLGDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECTWLRQLLGELHCRVPQATIAYCDN 1330 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 + + Y++ NP+ H R KHIE+ H+VRE VA L V I + Q A++F KGL S F Sbjct: 1331 ISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRVLPIPSAHQFADVFTKGLPSSMF 1389 >ref|XP_009359358.1| PREDICTED: uncharacterized protein LOC103949948 [Pyrus x bretschneideri] Length = 1243 Score = 393 bits (1010), Expect(2) = e-134 Identities = 202/420 (48%), Positives = 277/420 (65%), Gaps = 3/420 (0%) Frame = +1 Query: 1138 HSMTTRRKQGIFKPKVYAYEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGTW 1317 H +TTR K GI KP TV + + PTC+++A K +WR +M ++ AL + GTW Sbjct: 498 HVITTRSKSGIHKPNPKYVMHLTVDKFPVEPTCFSQAIKSQEWRNAMVQEFNALQKCGTW 557 Query: 1318 QLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPTT 1497 LV S N++ KW+F++KR DG++ER+KARLVA G++Q G+DY + F+PVVK +T Sbjct: 558 TLVPYHSKMNLLPNKWVFKVKRRADGSVERHKARLVANGFHQQAGVDYGETFSPVVKHST 617 Query: 1498 IRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYGL 1677 IR+++S+++ W +RQLDV+NAFLHG L+E+V+M QP G+ D+ P HVCKL++S+YGL Sbjct: 618 IRLVLSLAVSHRWPVRQLDVQNAFLHGFLKEDVYMRQPRGFVDQQFPSHVCKLQRSIYGL 677 Query: 1678 KQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXXX 1857 KQAPRAWF R S FL++ GFQ S D SLF L ++IYVDDIL+TG Sbjct: 678 KQAPRAWFQRFSDFLLELGFQESSCDYSLFVFRQQGVYLILLIYVDDILITGNSPHQISS 737 Query: 1858 XXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPFA 2037 F++KDLG LH+FLG++ N +HL Q +Y +LL +T T +KP STP Sbjct: 738 LITRLGTLFSMKDLGPLHYFLGVEVKYNGTAMHLCQSKYALDLLSRTNFTEAKPISTP-V 796 Query: 2038 PS---TTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAHWTAVK 2208 PS +++ ++ +YRSVVGALQY TITRPD+++ VN+ CQ M SP HW AVK Sbjct: 797 PSGHKLSAYVGESYDKPDVYRSVVGALQYITITRPDLSYAVNQVCQFMHSPKTTHWMAVK 856 Query: 2209 RILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLISWFSQQ 2388 RILRYL+ T +GL +K S QI FSDAD AG+ STGG I+ G+NL+SW S++ Sbjct: 857 RILRYLKATHTHGLLYK-PGSTQISAFSDADYAGNPNSLHSTGGFCIYHGSNLVSWSSKK 915 Score = 116 bits (290), Expect(2) = e-134 Identities = 59/110 (53%), Positives = 74/110 (67%) Frame = +2 Query: 2378 SLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDNMGATYLTAN 2557 S K KTVS SS EAEYR LA +E+ W +SL +L H R P IWCDN+ + L +N Sbjct: 912 SSKKQKTVSWSSAEAEYRQLAYTAAELSWFRSLFKDLHLHLDR-PQIWCDNISSIALASN 970 Query: 2558 PIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSRF 2707 P+FH R KH+E+ +HYVRE V L V +I +QDQLA++F KGLS SRF Sbjct: 971 PVFHARTKHLEVDYHYVREKVVRGQLLVNYICSQDQLADLFTKGLSSSRF 1020 >emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] Length = 1427 Score = 380 bits (977), Expect(2) = e-132 Identities = 205/439 (46%), Positives = 271/439 (61%), Gaps = 22/439 (5%) Frame = +1 Query: 1138 HSMTTRRKQGIFKPKVYA------YEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITAL 1299 H + TR + I PK + + + + PT ++A KDPKW A MD+++ AL Sbjct: 861 HRIVTRSQNNIHCPKQFPDFKTSFHVTKHPLPXSLEPTTASQALKDPKWCAXMDDELAAL 920 Query: 1300 LQNGTWQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNP 1479 +N TW LV S +NI+GCKW+FRIKRN DG+I RYKARLVAKG++Q G+DY D F+P Sbjct: 921 ARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYHDTFSP 980 Query: 1480 VVKPTTIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLK 1659 VVKPTTIR+++SI+L W I QLDV N FLHG L E+V+M QPPGY D+ P HVC+L+ Sbjct: 981 VVKPTTIRVVLSIALSNXWXISQLDVNNXFLHGTLTEDVYMAQPPGYVDQANPTHVCRLQ 1040 Query: 1660 KSLYGLKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXX 1839 K+LYGLKQAPRAW++ L FL+ GF SK DTSLF +Y ++YVDD+LVTG Sbjct: 1041 KALYGLKQAPRAWYMELRTFLLTFGFINSKXDTSLFIYQXRSATIYFLVYVDDLLVTGNC 1100 Query: 1840 XXXXXXXXXXXXREFAIKDLGELHFFLGIQ-ASRNSAGLHLSQEQYISNLLHKTKMTFSK 2016 F++KDLG L +FLG++ A S G+ LSQ QY+ +LL K + K Sbjct: 1101 SQSIRRFIDALAHRFSLKDLGPLSYFLGVEGAISTSDGMFLSQHQYVRDLLAKFNLEGIK 1160 Query: 2017 PYSTPFAPS---TTSHPSPLFEYHVLYRSVVGALQYATITRPDIAFVVNKACQHMQSPTE 2187 STP + + T + SP +RS++G LQY +TR DIAF VNK Q M +PT+ Sbjct: 1161 DSSTPMSSTGHLTLNDGSPPXN-ATQFRSLIGGLQYLQLTRLDIAFAVNKLAQFMHAPTQ 1219 Query: 2188 AHWTAVKRILRYLQGTLGYGLQFKCSSSLQIQ------------DFSDAD*AGDITDRRS 2331 HWTA KR+LRYL+ T+ GL F+ L +Q +SDAD AGD +S Sbjct: 1220 THWTAAKRLLRYLKHTIHLGLTFRRXQPLHLQAYSDVTPPLDLRAYSDADWAGDPDSYKS 1279 Query: 2332 TGGMTIFLGTNLISWFSQQ 2388 T +FLG + ISW S++ Sbjct: 1280 TTAFVLFLGGHPISWCSKK 1298 Score = 120 bits (302), Expect(2) = e-132 Identities = 57/106 (53%), Positives = 77/106 (72%) Frame = +2 Query: 2387 KHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDNMGATYLTANPIF 2566 K KTV+RSSTEAEYRA+A +EV W+ LL+EL ++P I+CDN+ ATYL NP+F Sbjct: 1298 KQKTVARSSTEAEYRAVASTAAEVTWVSHLLSELGITLQQSPTIYCDNLSATYLCVNPLF 1357 Query: 2567 HNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGLSFSR 2704 H+RMKH+ + +H+VRE V SL+V ++TQ QLA++ K LS SR Sbjct: 1358 HSRMKHVALDYHFVREKVXDGSLKVSHVNTQSQLADVLTKPLSKSR 1403 Score = 181 bits (458), Expect(2) = 2e-48 Identities = 89/196 (45%), Positives = 125/196 (63%), Gaps = 1/196 (0%) Frame = +3 Query: 255 LDLIHSDVW-VSPLCSINGFKYYVSFINSFSRFTWVYPLAYKSEVLDTFIKFKTHVENQL 431 LDL++SDVW SP+ SI+GF+YY+ FI+ F+++ W++P+AYKS+V F K+K+ VE Sbjct: 509 LDLVYSDVWGPSPIESIDGFRYYLIFIDYFTKYVWLFPMAYKSDVYTIFPKYKSMVEKYF 568 Query: 432 QRKIKYVQSDWGGEYRNVSTYLDNCGIGHRVSCPHAHAQNGRAGRKHRHIVETCXXXXXX 611 + + +D G EY+++ +Y + GI H+VS P+ G A RKHRH+VET Sbjct: 569 NASLVTLYTDGGTEYKSLKSYFISQGIQHQVSPPYTPEHVGSAERKHRHVVETGLAMLHK 628 Query: 612 XXXXXXFWSYAFETANFLINRLPTLTLHQLSPLETLFQTPPDYNFLHTFGCACSPCLRPF 791 +WSYAF A +LINRLPT L SP E+LFQ P+Y+ L FGC C P +RP+ Sbjct: 629 ASLPLKYWSYAFLAAAYLINRLPTPILKHQSPFESLFQHMPNYDKLRAFGCLCFPWMRPY 688 Query: 792 NAHKLEPRSVRCVCFG 839 + HKL+ RS CV G Sbjct: 689 SDHKLDKRSKPCVFLG 704 Score = 42.4 bits (98), Expect(2) = 2e-48 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +1 Query: 829 CV-LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNAAITSVTVLPS 1005 CV LGYS H Y+ + + ++ ISR V F EH FP+A P D A T + P Sbjct: 700 CVFLGYSNTHNAYKCLDLSSNRVYISRHVQFIEHKFPFASNTTPTDLBQAISTWSSCSP- 758 Query: 1006 STSATAIDPPTTII 1047 + AI P ++ Sbjct: 759 --ALAAIQPSFFVV 770 Score = 63.9 bits (154), Expect = 8e-07 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%) Frame = +3 Query: 3 DHVRVGNGSGLNISHIGTSILKHDDCTFTLSNVLHVPSITRNLI--HQFTKENNCFFEFH 176 D + +G+GSGL I+H G+S L +F LSNVL PSI +NLI +F K NN EF Sbjct: 338 DDILLGDGSGLEITHTGSSKLPATSKSFCLSNVLCXPSIKQNLISVSKFCKTNNTSIEFF 397 Query: 177 HDKFYVKDVITNKVLLTGPIRDGLY 251 F +KD+ T L G +D +Y Sbjct: 398 PSSFVIKDLKTGARLTQGRSKDDVY 422 >gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa] gi|31430072|gb|AAP52036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1058 Score = 369 bits (947), Expect(2) = e-130 Identities = 195/421 (46%), Positives = 258/421 (61%), Gaps = 12/421 (2%) Frame = +1 Query: 1150 TRRKQGIFKPKVYA-----YEVQTVCEDIIVPTCYTEACKDPKWRASMDEKITALLQNGT 1314 TR + GI KPK Y Y E+ P EA K+ W+ +MD++ AL+ N T Sbjct: 546 TRSRHGIHKPKKYTDGTIRYAALVSTEE---PGNLHEALKNKHWKLAMDKEFEALVHNKT 602 Query: 1315 WQLVQADSGYNIIGCKWIFRIKRNVDGTIERYKARLVAKGYNQVEGIDYQDRFNPVVKPT 1494 W LV G NII CKW++++KR D +I+RYKARLVAKG+ Q GIDY+D F+P+VK Sbjct: 603 WHLVPPQKGVNIIDCKWVYKVKRKADESIDRYKARLVAKGFKQRYGIDYEDTFSPIVKAA 662 Query: 1495 TIRMIISISLYKGWQIRQLDVKNAFLHGHLQEEVFMVQPPGYADKLLPHHVCKLKKSLYG 1674 TIR+++S+++ +GW +RQLDV+NAFLHG L+E+V+M QPPGY + P ++CKL K+LYG Sbjct: 663 TIRLVLSLAVSQGWSLRQLDVQNAFLHGFLEEDVYMRQPPGYEEPKAPQYLCKLDKALYG 722 Query: 1675 LKQAPRAWFVRLSQFLMQHGFQASKTDTSLFFRVTCFEDLYVIIYVDDILVTGXXXXXXX 1854 LKQAPRAW+ RL IYVDDI+V Sbjct: 723 LKQAPRAWYSRL-------------------------------IYVDDIIVASSSAQAVT 751 Query: 1855 XXXXXXXREFAIKDLGELHFFLGIQASRNSAGLHLSQEQYISNLLHKTKMTFSKPYSTPF 2034 +EFA+KDLGELH+FLGI+ + S + L+QE+Y S ++ + M K TP Sbjct: 752 ALLRSLEKEFALKDLGELHYFLGIEVKKASGNILLNQERYASEIVKRVSMENCKSVGTPL 811 Query: 2035 APSTTSHPSPLFEYHVL-------YRSVVGALQYATITRPDIAFVVNKACQHMQSPTEAH 2193 +T +E L YRSVVGALQY T+TRPDI+F VNK CQ +Q+PT H Sbjct: 812 ---STVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISFSVNKVCQFLQNPTTVH 868 Query: 2194 WTAVKRILRYLQGTLGYGLQFKCSSSLQIQDFSDAD*AGDITDRRSTGGMTIFLGTNLIS 2373 W VKRILRY++GTLG GL+ + SSS + +SDAD A + D+RSTGG +FLG+NLIS Sbjct: 869 WATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNLIS 928 Query: 2374 W 2376 W Sbjct: 929 W 929 Score = 128 bits (321), Expect(2) = e-130 Identities = 61/114 (53%), Positives = 81/114 (71%) Frame = +2 Query: 2351 FLGLT*FPGSLSKHKTVSRSSTEAEYRALADATSEVVWIQSLLTELSFHSPRAPVIWCDN 2530 FLG + K TVSRSSTEAEY+ALA+AT+E++W++ LL EL P +WCDN Sbjct: 921 FLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCDN 980 Query: 2531 MGATYLTANPIFHNRMKHIEIAFHYVRELVAALSLEVRFISTQDQLANIFIKGL 2692 +GATYL+ NP+FH R KHIEI +H+VRE VA L ++F+ +QDQ+A+ F K L Sbjct: 981 IGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTKAL 1034 Score = 55.5 bits (132), Expect(2) = 8e-07 Identities = 27/73 (36%), Positives = 41/73 (56%) Frame = +1 Query: 835 LGYSQLHKGYRSFNPLTGKIIISRDVVFDEHVFPYAKIFQPEDSSNAAITSVTVLPSSTS 1014 LGYS LHKG++ + TG++ ISRDVVFDE ++P+A + P + + + P Sbjct: 331 LGYSTLHKGFKCLDISTGRVYISRDVVFDEQIYPFANL-HPNAGARLRSEVLVLPPDLLP 389 Query: 1015 ATAIDPPTTIINE 1053 T D I+N+ Sbjct: 390 PTQFDQGGAIVND 402 Score = 28.1 bits (61), Expect(2) = 8e-07 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 765 ACSPCLRPFNAHKLEPRSVRCVCFGLQPATQG 860 A P LRP+N KLE RS +C G +G Sbjct: 308 ARQPNLRPYNHRKLEFRSKQCAFLGYSTLHKG 339