BLASTX nr result

ID: Papaver30_contig00012411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00012411
         (1041 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008372403.1| PREDICTED: LOW QUALITY PROTEIN: tetratricope...    67   2e-08
emb|CDP03808.1| unnamed protein product [Coffea canephora]             60   4e-06
ref|XP_009118671.1| PREDICTED: tetratricopeptide repeat protein ...    59   5e-06

>ref|XP_008372403.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 4
            homolog [Malus domestica]
          Length = 360

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
 Frame = -2

Query: 1022 SIMSTESSPLLLWDREHAYTREAIICIMRLILDFPYQRWNIFGISRRQC---------RS 870
            ++M ++S P L WD+EH YTR+AI        +  Y+  +   +S+ +           S
Sbjct: 232  NVMFSDSCPPLSWDQEHNYTRDAI--------ELYYEAGSGVSVSKTEILRCLLEGTPAS 283

Query: 869  LAESIIEDEKXXXXXXXXXXXXXXXXXXXVNEKKKKTLHDVLRQPDFVVPEIRGGLLIHL 690
              ESI +++K                   +   + +TL+DVLR+P+ ++P I        
Sbjct: 284  NVESINDEQKDANENSIGSSSAGKGFSKWIKVNESRTLYDVLREPNLIIPGI-------- 335

Query: 689  PVIIFITSVQFFIFPASINFSFLFVSARSFYVVSKCSSFYEKFKDGKWAPP 537
            PV                           FYVVSKCSSFY++FK G WAPP
Sbjct: 336  PV---------------------------FYVVSKCSSFYKEFKAGNWAPP 359


>emb|CDP03808.1| unnamed protein product [Coffea canephora]
          Length = 363

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
 Frame = -2

Query: 1040 FMMSLASIMSTESSPLLLWDREHAYTREAIICIMRLILDFPYQRWNIFGISRRQ------ 879
            F   +   M +ESSP L WD EHAYTR+A        L+  Y+  +   +S+R+      
Sbjct: 219  FYFDILPYMFSESSPPLPWDNEHAYTRDA--------LELYYEADSGVRLSKREIFHCLA 270

Query: 878  ----CRSLAESIIEDEKXXXXXXXXXXXXXXXXXXXVNEKKKKTLHDVLRQPDFVVPEIR 711
                  +L +  IE+                     +   +++ L+DVL++P+ VVP I 
Sbjct: 271  DGTAAANLEKCDIEENDAAEESSSSTTVLGGGGMRWIKVNERRPLYDVLKEPNLVVPGI- 329

Query: 710  GGLLIHLPVIIFITSVQFFIFPASINFSFLFVSARSFYVVSKCSSFYEKFKDGKWAP 540
                   PV                           FYVVSK SSFY++FK G WAP
Sbjct: 330  -------PV---------------------------FYVVSKKSSFYKEFKSGNWAP 352


>ref|XP_009118671.1| PREDICTED: tetratricopeptide repeat protein 4 homolog [Brassica rapa]
            gi|685369676|ref|XP_009118672.1| PREDICTED:
            tetratricopeptide repeat protein 4 homolog [Brassica
            rapa]
          Length = 362

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
 Frame = -2

Query: 1019 IMSTESSPLLLWDREHAYTREAIICIMRLILDFPYQRWNIFGISRRQCR-SLAESIIEDE 843
            +M +E SP L WD+ H YTREAI          P  R  +        + S AE+  +++
Sbjct: 237  MMFSEDSPPLPWDKNHEYTREAIELYYEAGSGTPLPRSRVLQYLLEGTKGSQAETTGDED 296

Query: 842  KXXXXXXXXXXXXXXXXXXXVNEKKKKTLHDVLRQPDFVVPEIRGGLLIHLPVIIFITSV 663
                                VNE  ++TLHDVL++P+ V+PEI        PV       
Sbjct: 297  TSLPKTPYNVKGKGSSGMVKVNE--RRTLHDVLKEPNLVIPEI--------PV------- 339

Query: 662  QFFIFPASINFSFLFVSARSFYVVSKCSSFYEKFKDGKWAPP 537
                                FY+VSK + FY+ F  GKW+PP
Sbjct: 340  --------------------FYIVSKRTRFYKDFAAGKWSPP 361


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