BLASTX nr result

ID: Papaver30_contig00011720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00011720
         (683 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010647203.1| PREDICTED: splicing factor U2af large subuni...    69   3e-09
ref|XP_010647283.1| PREDICTED: splicing factor U2af large subuni...    62   3e-07
emb|CBI14816.3| unnamed protein product [Vitis vinifera]               62   3e-07

>ref|XP_010647203.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 552

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 56/177 (31%), Positives = 67/177 (37%), Gaps = 8/177 (4%)
 Frame = -2

Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332
           MSG+D   DGNGE+Y+     G  GGSSP+D  E+RDSHHKH                + 
Sbjct: 1   MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60

Query: 331 RENDYGGYNRDYKSRS-NDXXXXXXXXXXXXXXGFDRLRNCDYXXXXXXXXXXXXXXXXX 155
           R N    ++RDYK RS  D                D  R+ DY                 
Sbjct: 61  RNN---RHHRDYKDRSLRDDRGRGKYDNYDHHRSRDNDRHHDY---SRDRERRQRQRSRS 114

Query: 154 XXXXXXXXXXXXXXXXXXXXXXXXXSGFDMAP------PSTAVPGQLPGAPPINPEM 2
                                    SGFDMAP      P  AVPG+LPG P + P M
Sbjct: 115 RSKDRSRNRSKSRSRSRSRSKSKRTSGFDMAPPVAALLPGAAVPGELPGVPQMVPGM 171


>ref|XP_010647283.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 140

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -2

Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332
           MSG+D   DGNGE+Y+     G  GGSSP+D  E+RDSHHKH                + 
Sbjct: 1   MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60

Query: 331 RENDYGGYNRDYKSRS 284
           R N    ++RDYK RS
Sbjct: 61  RNN---RHHRDYKDRS 73


>emb|CBI14816.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -2

Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332
           MSG+D   DGNGE+Y+     G  GGSSP+D  E+RDSHHKH                + 
Sbjct: 1   MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60

Query: 331 RENDYGGYNRDYKSRS 284
           R N    ++RDYK RS
Sbjct: 61  RNN---RHHRDYKDRS 73


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