BLASTX nr result
ID: Papaver30_contig00011720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver30_contig00011720 (683 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010647203.1| PREDICTED: splicing factor U2af large subuni... 69 3e-09 ref|XP_010647283.1| PREDICTED: splicing factor U2af large subuni... 62 3e-07 emb|CBI14816.3| unnamed protein product [Vitis vinifera] 62 3e-07 >ref|XP_010647203.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera] Length = 552 Score = 68.9 bits (167), Expect = 3e-09 Identities = 56/177 (31%), Positives = 67/177 (37%), Gaps = 8/177 (4%) Frame = -2 Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332 MSG+D DGNGE+Y+ G GGSSP+D E+RDSHHKH + Sbjct: 1 MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60 Query: 331 RENDYGGYNRDYKSRS-NDXXXXXXXXXXXXXXGFDRLRNCDYXXXXXXXXXXXXXXXXX 155 R N ++RDYK RS D D R+ DY Sbjct: 61 RNN---RHHRDYKDRSLRDDRGRGKYDNYDHHRSRDNDRHHDY---SRDRERRQRQRSRS 114 Query: 154 XXXXXXXXXXXXXXXXXXXXXXXXXSGFDMAP------PSTAVPGQLPGAPPINPEM 2 SGFDMAP P AVPG+LPG P + P M Sbjct: 115 RSKDRSRNRSKSRSRSRSRSKSKRTSGFDMAPPVAALLPGAAVPGELPGVPQMVPGM 171 >ref|XP_010647283.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera] Length = 140 Score = 62.0 bits (149), Expect = 3e-07 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -2 Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332 MSG+D DGNGE+Y+ G GGSSP+D E+RDSHHKH + Sbjct: 1 MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60 Query: 331 RENDYGGYNRDYKSRS 284 R N ++RDYK RS Sbjct: 61 RNN---RHHRDYKDRS 73 >emb|CBI14816.3| unnamed protein product [Vitis vinifera] Length = 144 Score = 62.0 bits (149), Expect = 3e-07 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -2 Query: 508 MSGFDNSRDGNGETYKVEQDHGG-GGSSPHDLVEDRDSHHKHXXXXXXXXXXXXXXXGQH 332 MSG+D DGNGE+Y+ G GGSSP+D E+RDSHHKH + Sbjct: 1 MSGYDTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSHHKHNSRELDREKSRTRERDRD 60 Query: 331 RENDYGGYNRDYKSRS 284 R N ++RDYK RS Sbjct: 61 RNN---RHHRDYKDRS 73