BLASTX nr result

ID: Papaver30_contig00011236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00011236
         (675 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010261025.1| PREDICTED: protein GIGANTEA-like isoform X2 ...    60   1e-06
ref|XP_010261024.1| PREDICTED: protein GIGANTEA-like isoform X1 ...    60   1e-06
emb|CAN81809.1| hypothetical protein VITISV_032939 [Vitis vinifera]    58   5e-06
gb|ADZ72836.1| GIGANTEA-like protein [Aquilegia formosa]               57   8e-06

>ref|XP_010261025.1| PREDICTED: protein GIGANTEA-like isoform X2 [Nelumbo nucifera]
          Length = 1102

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 35/60 (58%), Positives = 41/60 (68%)
 Frame = -3

Query: 673  SKQEEIQSTKHVSPLSQYLSLGGNIDWHAEIEKCLTWEAQKGHAAGVSNTFLSAASKELG 494
            SKQE IQ+         YLSLG  IDWH +IEKCL  EAQ  HA+G++ TFL AA+KELG
Sbjct: 1041 SKQEGIQAIHGTR--YPYLSLG-IIDWHEDIEKCLKCEAQSRHASGMNITFLGAAAKELG 1097


>ref|XP_010261024.1| PREDICTED: protein GIGANTEA-like isoform X1 [Nelumbo nucifera]
          Length = 1174

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 35/60 (58%), Positives = 41/60 (68%)
 Frame = -3

Query: 673  SKQEEIQSTKHVSPLSQYLSLGGNIDWHAEIEKCLTWEAQKGHAAGVSNTFLSAASKELG 494
            SKQE IQ+         YLSLG  IDWH +IEKCL  EAQ  HA+G++ TFL AA+KELG
Sbjct: 1113 SKQEGIQAIHGTR--YPYLSLG-IIDWHEDIEKCLKCEAQSRHASGMNITFLGAAAKELG 1169


>emb|CAN81809.1| hypothetical protein VITISV_032939 [Vitis vinifera]
          Length = 1172

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -3

Query: 625  QYLSLGGNIDWHAEIEKCLTWEAQKGHAAGVSNTFLSAASKELG 494
            QY++LG  IDW A+IEKCLTWEA    A G++N FL AA+KELG
Sbjct: 1125 QYVNLG-IIDWQADIEKCLTWEAHSRLATGMTNQFLDAAAKELG 1167


>gb|ADZ72836.1| GIGANTEA-like protein [Aquilegia formosa]
          Length = 750

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 601 IDWHAEIEKCLTWEAQKGHAAGVSNTFLSAASKELG 494
           IDW+ +IEKCLTWEA+  H  GVS TFL AA+K+LG
Sbjct: 710 IDWNKDIEKCLTWEARSRHTTGVSTTFLDAAAKDLG 745


Top