BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00011206
         (767 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch...   503   e-140
gb|AAS86824.1| RNA polymerase II second largest subunit, partial...   503   e-140
emb|CAD89358.1| RNA polymerase II, second largest subunit [Vitis...   503   e-140
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   503   e-140
gb|AAY85236.1| RNA polymerase II second largest subunit, partial...   503   e-140
gb|AAY85203.1| RNA polymerase II second largest subunit, partial...   503   e-140
gb|AAW22925.1| RNA polymerase II second largest subunit, partial...   501   e-139
gb|AAY85190.1| RNA polymerase II second largest subunit, partial...   501   e-139
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su...   501   e-139
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi...   501   e-139
gb|AAY85199.1| RNA polymerase II second largest subunit, partial...   501   e-139
ref|XP_009419772.1| PREDICTED: DNA-directed RNA polymerase II su...   500   e-139
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo...   500   e-139
gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptid...   500   e-139
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su...   500   e-139
gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriode...   500   e-139
gb|AAY89339.1| RNA polymerase II second largest subunit [Berberi...   500   e-139
gb|AAY85223.1| RNA polymerase II second largest subunit, partial...   500   e-139
gb|AAS86822.1| RNA polymerase II second largest subunit, partial...   500   e-139
gb|AAC08961.1| RNA polymerase II second largest subunit [Nymphae...   499   e-139

>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
          Length = 951

 Score =  503 bits (1295), Expect = e-140
 Identities = 249/255 (97%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLVSAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLVSARVNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>gb|AAS86824.1| RNA polymerase II second largest subunit, partial [Eschscholzia
           californica]
          Length = 559

 Score =  503 bits (1295), Expect = e-140
 Identities = 249/255 (97%), Positives = 253/255 (99%)
 Frame = -1

Query: 767 EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
           EETTMISMTINDLVSAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 177 EETTMISMTINDLVSARVNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 236

Query: 587 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
           SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 237 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 296

Query: 407 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
           SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY
Sbjct: 297 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 356

Query: 227 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
           DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 357 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 415

Query: 47  VVLTTNADGLRFVKV 3
           V+LTTNADGLRFVKV
Sbjct: 416 VLLTTNADGLRFVKV 430


>emb|CAD89358.1| RNA polymerase II, second largest subunit [Vitis piasezkii]
          Length = 551

 Score =  503 bits (1294), Expect = e-140
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767 EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
           EETTMISMTINDL+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 160 EETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 219

Query: 587 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
           SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 220 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 279

Query: 407 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
           SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 280 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 339

Query: 227 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
           DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 340 DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 398

Query: 47  VVLTTNADGLRFVKV 3
           V+LTTNADGLRFVKV
Sbjct: 399 VLLTTNADGLRFVKV 413


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] gi|147841183|emb|CAN72948.1| hypothetical
            protein VITISV_033708 [Vitis vinifera]
            gi|302143287|emb|CBI21848.3| unnamed protein product
            [Vitis vinifera]
          Length = 1193

 Score =  503 bits (1294), Expect = e-140
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 675  EETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 734

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 735  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 794

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 795  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 854

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 855  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 913

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 914  VLLTTNADGLRFVKV 928


>gb|AAY85236.1| RNA polymerase II second largest subunit, partial [Vitis piasezkii]
          Length = 951

 Score =  503 bits (1294), Expect = e-140
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>gb|AAY85203.1| RNA polymerase II second largest subunit, partial [Dicentra formosa]
          Length = 873

 Score =  503 bits (1294), Expect = e-140
 Identities = 248/255 (97%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLVSAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQD++ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDES-QGQASRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>gb|AAW22925.1| RNA polymerase II second largest subunit, partial [Asarum caudatum]
          Length = 565

 Score =  501 bits (1291), Expect = e-139
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767 EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
           EETTMISMTINDLVSAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 156 EETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 215

Query: 587 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
           SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 216 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 275

Query: 407 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
           SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 276 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 335

Query: 227 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
           DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQD++ QGQASRYTRRDHST++RHSESGMVDQ
Sbjct: 336 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDES-QGQASRYTRRDHSTALRHSESGMVDQ 394

Query: 47  VVLTTNADGLRFVKV 3
           V+LTTNADGLRFVKV
Sbjct: 395 VLLTTNADGLRFVKV 409


>gb|AAY85190.1| RNA polymerase II second largest subunit, partial [Aextoxicon
            punctatum]
          Length = 873

 Score =  501 bits (1291), Expect = e-139
 Identities = 246/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLITARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDA QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQASRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
            brachyantha]
          Length = 1184

 Score =  501 bits (1290), Expect = e-139
 Identities = 245/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLV+ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 668  EETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 727

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 728  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 787

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KE+FGRPNRENTMGMRHGSY
Sbjct: 788  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSY 847

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKT+PI QDDA QGQA+RYT+RDHSTS+RHSESGMVDQ
Sbjct: 848  DKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDA-QGQATRYTKRDHSTSLRHSESGMVDQ 906

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 907  VLLTTNADGLRFVKV 921


>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
          Length = 873

 Score =  501 bits (1290), Expect = e-139
 Identities = 246/255 (96%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL+SA+ NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLISAKLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI CY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAITCY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDA QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQASRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>gb|AAY85199.1| RNA polymerase II second largest subunit, partial [Cissus tuberosa]
          Length = 951

 Score =  501 bits (1290), Expect = e-139
 Identities = 247/255 (96%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLVSAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 569  EETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 628

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 629  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 688

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 689  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 748

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDD+ QGQ SRYTRRDHSTS+RHSESGMVDQ
Sbjct: 749  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDS-QGQPSRYTRRDHSTSLRHSESGMVDQ 807

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 808  VLLTTNADGLRFVKV 822


>ref|XP_009419772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
            acuminata subsp. malaccensis]
          Length = 1212

 Score =  500 bits (1288), Expect = e-139
 Identities = 246/255 (96%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 696  EETTMISMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 755

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 756  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 815

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 816  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 875

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            +KLDDDGLAPPGTRVSGEDVIIGKT+PI QDDA QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 876  EKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDA-QGQASRYTRRDHSTSLRHSESGMVDQ 934

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 935  VLLTTNADGLRFVKV 949


>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
          Length = 1218

 Score =  500 bits (1288), Expect = e-139
 Identities = 244/255 (95%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL+ ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 702  EETTMISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 761

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 762  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 821

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KE+FGRPNRENTMGMRHGSY
Sbjct: 822  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSY 881

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKT+PI QDDA QGQA+RYT+RDHSTS+RHSESGMVDQ
Sbjct: 882  DKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDA-QGQATRYTKRDHSTSLRHSESGMVDQ 940

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 941  VLLTTNADGLRFVKV 955


>gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
            expressed [Oryza sativa Japonica Group]
            gi|125545063|gb|EAY91202.1| hypothetical protein
            OsI_12811 [Oryza sativa Indica Group]
          Length = 1222

 Score =  500 bits (1288), Expect = e-139
 Identities = 244/255 (95%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL+ ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 706  EETTMISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 765

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 766  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 825

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KE+FGRPNRENTMGMRHGSY
Sbjct: 826  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSY 885

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKT+PI QDDA QGQA+RYT+RDHSTS+RHSESGMVDQ
Sbjct: 886  DKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDA-QGQATRYTKRDHSTSLRHSESGMVDQ 944

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 945  VLLTTNADGLRFVKV 959


>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
            nucifera]
          Length = 1189

 Score =  500 bits (1287), Expect = e-139
 Identities = 246/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 671  EETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 730

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 731  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 790

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+RENTMGMRHGSY
Sbjct: 791  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSY 850

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDD+ QGQ+SRYTRRDHSTS+RHSESGMVDQ
Sbjct: 851  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDS-QGQSSRYTRRDHSTSLRHSESGMVDQ 909

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 910  VLLTTNADGLRFVKV 924


>gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriodendron tulipifera]
          Length = 942

 Score =  500 bits (1287), Expect = e-139
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTI+DLVSAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 560  EETTMISMTISDLVSARLNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 619

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 620  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 679

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY
Sbjct: 680  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 739

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQD++ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 740  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDES-QGQASRYTRRDHSTSLRHSESGMVDQ 798

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 799  VLLTTNADGLRFVKV 813


>gb|AAY89339.1| RNA polymerase II second largest subunit [Berberidopsis corallina]
          Length = 853

 Score =  500 bits (1287), Expect = e-139
 Identities = 245/255 (96%), Positives = 252/255 (98%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDL++A+ NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 549  EETTMISMTINDLITAKLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 608

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI CY
Sbjct: 609  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAITCY 668

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 669  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 728

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDA QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 729  DKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQASRYTRRDHSTSLRHSESGMVDQ 787

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 788  VLLTTNADGLRFVKV 802


>gb|AAY85223.1| RNA polymerase II second largest subunit, partial [Nelumbo nucifera]
          Length = 865

 Score =  500 bits (1287), Expect = e-139
 Identities = 246/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767  EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
            EETTMISMTINDLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 561  EETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 620

Query: 587  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
            SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 621  SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 680

Query: 407  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
            SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+RENTMGMRHGSY
Sbjct: 681  SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSY 740

Query: 227  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
            DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDD+ QGQ+SRYTRRDHSTS+RHSESGMVDQ
Sbjct: 741  DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDS-QGQSSRYTRRDHSTSLRHSESGMVDQ 799

Query: 47   VVLTTNADGLRFVKV 3
            V+LTTNADGLRFVKV
Sbjct: 800  VLLTTNADGLRFVKV 814


>gb|AAS86822.1| RNA polymerase II second largest subunit, partial [Liriodendron
           tulipifera]
          Length = 539

 Score =  500 bits (1287), Expect = e-139
 Identities = 247/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767 EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
           EETTMISMTI+DLVSAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 157 EETTMISMTISDLVSARLNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 216

Query: 587 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
           SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 217 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 276

Query: 407 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
           SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY
Sbjct: 277 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 336

Query: 227 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
           DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQD++ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 337 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDES-QGQASRYTRRDHSTSLRHSESGMVDQ 395

Query: 47  VVLTTNADGLRFVKV 3
           V+LTTNADGLRFVKV
Sbjct: 396 VLLTTNADGLRFVKV 410


>gb|AAC08961.1| RNA polymerase II second largest subunit [Nymphaea odorata]
          Length = 555

 Score =  499 bits (1286), Expect = e-139
 Identities = 246/255 (96%), Positives = 253/255 (99%)
 Frame = -1

Query: 767 EETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 588
           EETTMISMTI+DLVSAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ
Sbjct: 164 EETTMISMTISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQ 223

Query: 587 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 408
           SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY
Sbjct: 224 SAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACY 283

Query: 407 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSY 228
           SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSY
Sbjct: 284 SGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY 343

Query: 227 DKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQ 48
           DKLDDDGLAPPGTRVSGEDVIIGKT+PI+QDD+ QGQASRYTRRDHSTS+RHSESGMVDQ
Sbjct: 344 DKLDDDGLAPPGTRVSGEDVIIGKTSPISQDDS-QGQASRYTRRDHSTSLRHSESGMVDQ 402

Query: 47  VVLTTNADGLRFVKV 3
           V+LTTNADGLRFVKV
Sbjct: 403 VLLTTNADGLRFVKV 417