BLASTX nr result

ID: Papaver30_contig00009500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00009500
         (961 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Popu...    72   8e-10
ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Popu...    72   8e-10
ref|XP_011034645.1| PREDICTED: F-box protein CPR30-like isoform ...    69   5e-09
ref|XP_011034644.1| PREDICTED: F-box protein CPR30-like isoform ...    69   5e-09
ref|XP_006299272.1| hypothetical protein CARUB_v10015426mg [Caps...    59   7e-06

>ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|566147699|ref|XP_006368651.1| S haplotype-specific
           F-box protein 1 [Populus trichocarpa]
           gi|222844963|gb|EEE82510.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
           gi|550346725|gb|ERP65220.1| S haplotype-specific F-box
           protein 1 [Populus trichocarpa]
          Length = 408

 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 60/242 (24%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
 Frame = -3

Query: 875 QVLGPVNGLVCFVDRGEFAVRLYNVSTREVAPWIQSTLLKEERDLYEKDGTYINNVHGGP 696
           +V+G  NGL+  ++  +F++ LYN STRE    I  + L+   DL +   + + N +G  
Sbjct: 92  EVMGSCNGLLALLN-SDFSIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFNFYG-- 147

Query: 695 VFLFGYDPLAKEHKLFCFWTLSRIRTYLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHE 516
              FG+DP+ +++K+       R   + G + +   +   +  ++ +   W+RID  P++
Sbjct: 148 ---FGHDPINEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD 197

Query: 515 DNQEKLNVVIPAFLN---RKSF-VYANGSIYWINKLMSISGDSVHRTEDKHSKGGDNGDP 348
                L  ++P   +   R+ + V+AN +++W   ++               KG +NG  
Sbjct: 198 -----LRFILPPDYHPRCRRGYGVFANSAVHWKATVVG--------------KGKENGS- 237

Query: 347 DVIVAFDVGSEKFRVIPIPKFILDEPREPAFLQPIAILEMDGRLVLVYRKRLCTVKLWIL 168
           D+IVAFD+G+E+F++IP P +  +E         + +  + G L +   K    V++W++
Sbjct: 238 DLIVAFDLGAEEFKIIPQPDYSSNE-------HEMNVGVLGGCLCVFCNKNCKQVEIWVM 290

Query: 167 ND 162
            +
Sbjct: 291 KE 292


>ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|550346724|gb|ERP65219.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
          Length = 420

 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 60/242 (24%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
 Frame = -3

Query: 875 QVLGPVNGLVCFVDRGEFAVRLYNVSTREVAPWIQSTLLKEERDLYEKDGTYINNVHGGP 696
           +V+G  NGL+  ++  +F++ LYN STRE    I  + L+   DL +   + + N +G  
Sbjct: 92  EVMGSCNGLLALLN-SDFSIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFNFYG-- 147

Query: 695 VFLFGYDPLAKEHKLFCFWTLSRIRTYLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHE 516
              FG+DP+ +++K+       R   + G + +   +   +  ++ +   W+RID  P++
Sbjct: 148 ---FGHDPINEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD 197

Query: 515 DNQEKLNVVIPAFLN---RKSF-VYANGSIYWINKLMSISGDSVHRTEDKHSKGGDNGDP 348
                L  ++P   +   R+ + V+AN +++W   ++               KG +NG  
Sbjct: 198 -----LRFILPPDYHPRCRRGYGVFANSAVHWKATVVG--------------KGKENGS- 237

Query: 347 DVIVAFDVGSEKFRVIPIPKFILDEPREPAFLQPIAILEMDGRLVLVYRKRLCTVKLWIL 168
           D+IVAFD+G+E+F++IP P +  +E         + +  + G L +   K    V++W++
Sbjct: 238 DLIVAFDLGAEEFKIIPQPDYSSNE-------HEMNVGVLGGCLCVFCNKNCKQVEIWVM 290

Query: 167 ND 162
            +
Sbjct: 291 KE 292


>ref|XP_011034645.1| PREDICTED: F-box protein CPR30-like isoform X2 [Populus euphratica]
           gi|743874359|ref|XP_011034646.1| PREDICTED: F-box
           protein CPR30-like isoform X2 [Populus euphratica]
          Length = 412

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 61/243 (25%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
 Frame = -3

Query: 875 QVLGPVNGLVCFVDRGEFAVRLYNVSTREVAPWIQSTLLKEERDLYEKDGTYINNVHGGP 696
           +V+G  NGL+  ++  +F + LYN STRE    I  + L+   DL +   + + N +G  
Sbjct: 96  EVMGSCNGLLALLN-SDFRIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFNFYG-- 151

Query: 695 VFLFGYDPLAKEHKLFCFWTLSRIRTYLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHE 516
              FG+DP+ +++K+       R   + G + +   +   +  ++ +   W+RID  P++
Sbjct: 152 ---FGHDPVNEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD 201

Query: 515 DNQEKLNVVIPAFLN---RKSF-VYANGSIYWINKLMSISGDSVHRTEDKHSKGGDNGDP 348
                L  ++P   +   R+ + V+AN +++W   ++               KG +NG  
Sbjct: 202 -----LRFILPPDYHPRCRRGYGVFANSAVHWKATVVG--------------KGKENGS- 241

Query: 347 DVIVAFDVGSEKFRVIPIPKFILDEPREPAFLQPIAILEMDGRLVLVYRKRLC-TVKLWI 171
           D+I+AFD+G+E+F++IP P +  +E         + +L   G  + V+  R C  V++W+
Sbjct: 242 DLILAFDLGAEEFKIIPQPDYSSNEHE-----MNVGVL---GGCLCVFCNRNCEQVEIWV 293

Query: 170 LND 162
           + +
Sbjct: 294 MKE 296


>ref|XP_011034644.1| PREDICTED: F-box protein CPR30-like isoform X1 [Populus euphratica]
          Length = 448

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 61/243 (25%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
 Frame = -3

Query: 875 QVLGPVNGLVCFVDRGEFAVRLYNVSTREVAPWIQSTLLKEERDLYEKDGTYINNVHGGP 696
           +V+G  NGL+  ++  +F + LYN STRE    I  + L+   DL +   + + N +G  
Sbjct: 96  EVMGSCNGLLALLN-SDFRIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFNFYG-- 151

Query: 695 VFLFGYDPLAKEHKLFCFWTLSRIRTYLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHE 516
              FG+DP+ +++K+       R   + G + +   +   +  ++ +   W+RID  P++
Sbjct: 152 ---FGHDPVNEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD 201

Query: 515 DNQEKLNVVIPAFLN---RKSF-VYANGSIYWINKLMSISGDSVHRTEDKHSKGGDNGDP 348
                L  ++P   +   R+ + V+AN +++W   ++               KG +NG  
Sbjct: 202 -----LRFILPPDYHPRCRRGYGVFANSAVHWKATVVG--------------KGKENGS- 241

Query: 347 DVIVAFDVGSEKFRVIPIPKFILDEPREPAFLQPIAILEMDGRLVLVYRKRLC-TVKLWI 171
           D+I+AFD+G+E+F++IP P +  +E         + +L   G  + V+  R C  V++W+
Sbjct: 242 DLILAFDLGAEEFKIIPQPDYSSNEHE-----MNVGVL---GGCLCVFCNRNCEQVEIWV 293

Query: 170 LND 162
           + +
Sbjct: 294 MKE 296


>ref|XP_006299272.1| hypothetical protein CARUB_v10015426mg [Capsella rubella]
           gi|482567981|gb|EOA32170.1| hypothetical protein
           CARUB_v10015426mg [Capsella rubella]
          Length = 440

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 10/305 (3%)
 Frame = -3

Query: 956 GSGCEEREPEAIIH-NVRMTDNNWFVYDQVLGPVNGLVCFVDRGEFAVRLYNVST---RE 789
           GS  +E +   ++  N +    NW    +++G  NGLVC +  GE AV LYN +T   + 
Sbjct: 154 GSEVDEDDRRVMLTLNAKSHRRNWV---EIVGSSNGLVC-ISPGEGAVFLYNPTTGDSKR 209

Query: 788 VAPWIQSTLLKEERDLYEKDGTYINNVHGGPVFLFGYDPLAKEHKLFCFWTLSRIRTYLG 609
           +   ++   ++  RD ++  G             FG+D L  ++K+            + 
Sbjct: 210 LPETLRPKSVEHGRDNFQSYG-------------FGFDDLTDDYKV------------VK 244

Query: 608 RAIESHNYVSWEALTIGRDTKWRRIDVVPHEDNQEKLNVVIPAFLNRKSFVYANGSIYWI 429
               S +++     ++  D+ WRRI  + +E N               S V+ NG+I+W+
Sbjct: 245 LVASSDDFLDASVYSLKADS-WRRICNLNYEHNDGFYT----------SGVHFNGAIHWV 293

Query: 428 NKLMSISGDSVHRTEDKHSKGGDNGDPDVIVAFDVGSEKFRVIPIPKFILDEPRE-PAFL 252
                        TE  H       D  V+VAFD+ +E+FR IP+P    DE  + P   
Sbjct: 294 F------------TEGSH-------DQRVVVAFDLQTEEFREIPLP----DEAEDCPHRF 330

Query: 251 QPIAILEMDGRLVLVYRKRLCTVKLWILNDDIDRKMENCKGNIRNWSEETIALPF----- 87
           +   +  ++G L ++         +W++N+          G  ++WS   I+L +     
Sbjct: 331 KNFVVGSLNGCLCVINSCYEVHDDIWVMNE---------YGVAKSWSRIRISLLYRSMKP 381

Query: 86  LCDTR 72
           LC T+
Sbjct: 382 LCSTK 386


Top