BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00008391
         (3213 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1566   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1529   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...  1507   0.0  
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s...  1505   0.0  
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...  1452   0.0  
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s...  1450   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1450   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...  1450   0.0  
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...  1448   0.0  
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...  1448   0.0  
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1447   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1447   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...  1446   0.0  
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital...  1444   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...  1444   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1441   0.0  
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s...  1438   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1436   0.0  
ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1432   0.0  
gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g...  1432   0.0  

>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1566 bits (4056), Expect = 0.0
 Identities = 797/1059 (75%), Positives = 892/1059 (84%), Gaps = 3/1059 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+AQ+LTYPE VS +NIEK
Sbjct: 352  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEK 411

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NG QKYPGANFIR   GS+ NLR+  RK  AD LKYG  VERHLEDGD+VLFNR
Sbjct: 412  LRQCVRNGSQKYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNR 471

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 472  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 531

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNG ILVASTQDFLTS+FLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPA
Sbjct: 532  VQNNLCTPKNGAILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPA 591

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            LIKP+ELWTGKQLF+VL+RPHA MRV++NLTV EK+  K +ET+CPNDGFVYFRNSELIC
Sbjct: 592  LIKPIELWTGKQLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELIC 651

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGLFSVLLRDY+AHAAASCMNR+AKLSARWIGNHGFSIGI DVQPG+
Sbjct: 652  GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGE 711

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L                +LI  Y  G LEL+PGCDAAQTLEA+IT  LN IRE+ A VC
Sbjct: 712  LLKDKKKETIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVC 771

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPR S T
Sbjct: 772  MQELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 831

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDL+++YD
Sbjct: 832  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYD 891

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            +TVR+ASGGVVQFLYGDDG+DP+ MEGK G PLNL+R+Y+K KATCP+  ++SL P+EI 
Sbjct: 892  DTVRNASGGVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIV 951

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGE 1234
            +++  R+S++DMTP+GGCS AFKK L+D   F+QN+        I+ L+NTR+ L LD E
Sbjct: 952  KILDDRISRYDMTPDGGCSSAFKKLLVD---FIQNR--------ISILRNTRKALGLDEE 1000

Query: 1233 ---KRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPGT 1063
               K  S+ LE ++ANI+GIT QQL+VFLETCISRYHLKR                EPGT
Sbjct: 1001 YAKKDNSDILEHIAANISGITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGT 1060

Query: 1062 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCIE 883
            QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLEC ++ KSAR+V+GCIE
Sbjct: 1061 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIE 1120

Query: 882  KTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQHV 703
            KTVLGE+A+S+KI+ T RQA I+++LD+  I+ +QLKISA SV++SI +H   K K + +
Sbjct: 1121 KTVLGEVAKSIKIVMTQRQASIVISLDMARIEAAQLKISADSVKESILKHLNPKFKPK-I 1179

Query: 702  EVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRGKETGE 523
             V    KL +     DR+K+HFELH+LK++LP+VIV GI TV+RA+INK KD      G+
Sbjct: 1180 VVDKGYKLIVIPTESDRSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKD------GK 1233

Query: 522  HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGHGMTI 343
            +NLLVEGTNL  VMGT GVDGC TTSNHIIEVQ TLGIEAAR+CIIDEI YTM  HGM I
Sbjct: 1234 YNLLVEGTNLLGVMGTPGVDGCKTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMDI 1293

Query: 342  DIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEG 163
            DIRHMMLL DLMT KGEVLGITR GIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEG
Sbjct: 1294 DIRHMMLLADLMTYKGEVLGITRTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEG 1353

Query: 162  VSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            VSECII+GIPMQIGTGILK+ QR   VPQL Y P+ I S
Sbjct: 1354 VSECIILGIPMQIGTGILKVIQRYPQVPQLSYKPDPIIS 1392


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score = 1529 bits (3958), Expect = 0.0
 Identities = 785/1061 (73%), Positives = 884/1061 (83%), Gaps = 5/1061 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+A++L+YPE VS +NIEK
Sbjct: 343  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEK 402

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP KYPGA  IR   GS+++L +  RK +AD LKYG  VERHLEDGDVVLFNR
Sbjct: 403  LRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNR 462

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 463  QPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 522

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPA
Sbjct: 523  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPA 582

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNK--GRETLCPNDGFVYFRNSEL 2320
            +IKPVELWTGKQLFNVL+RPHA +RV++NLTV EK+YNK  G+ET+CP+DGFVYFRNSEL
Sbjct: 583  IIKPVELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSEL 642

Query: 2319 ICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQP 2140
            I GQLGKATLGNGNKDGLFSVLLRDY+AHAAA+CMNRLAKLSARWIGNHGFSIGI DVQP
Sbjct: 643  ISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQP 702

Query: 2139 GKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAAT 1960
            G  L+               +LI+ Y  GKL+LQPGC+AAQTLEAEITG+LN IRE  A 
Sbjct: 703  GGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTAN 762

Query: 1959 VCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNS 1780
            VCME LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDR+LPHFPR S
Sbjct: 763  VCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKS 822

Query: 1779 VTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 1600
             TPDAKGFV +SFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI 
Sbjct: 823  KTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQ 882

Query: 1599 YDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTE 1420
            YD TVR+A+G +VQFLYGDDGMDP+RMEGKDG PLN +RL++KVKATCPA  ++SLS  +
Sbjct: 883  YDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQ 942

Query: 1419 IFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLD 1240
            I E  V RL +H+ + E GCSDAFK +L            GFL +C    KNTR  L L 
Sbjct: 943  I-EETVKRLKEHNTSAE-GCSDAFKTNL-----------SGFLEECKEKFKNTREALGLH 989

Query: 1239 GEKRGSESL---EKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEP 1069
            GE  G E+L   EK + NI+GIT +QLQVFL+TCISRY LKR                EP
Sbjct: 990  GEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEP 1049

Query: 1068 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGC 889
            GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK ISTPIITA LEC N+ K+AR+V+G 
Sbjct: 1050 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGR 1109

Query: 888  IEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQ 709
            IE+T LG++A+S+KI+ TSR A I V LD+E IQ SQL I ++ V++SI R+ + KLK Q
Sbjct: 1110 IERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQ 1169

Query: 708  HVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRGKET 529
            H++VL+  KL +H P  DR+ IHFELH+LK++LP V+V GI TVERA+IN  KD + K  
Sbjct: 1170 HIKVLDAGKLEVH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVIN--KDNKVK-- 1224

Query: 528  GEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGHGM 349
              +NLLVEGT L+ VMGT GV G  TTSNHIIEVQ+TLGIEAARKCII+EI YTM  HGM
Sbjct: 1225 --YNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGM 1282

Query: 348  TIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDDKI 169
            +IDIRHMMLL DLMT +GEVLGITRFGIQKM +SVLMLASFEKTADHLFNASV+GRDDKI
Sbjct: 1283 SIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKI 1342

Query: 168  EGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            EGVSECIIMGIPMQ+GTGILK+RQRL+ VP+L YG + I S
Sbjct: 1343 EGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1383


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
            guineensis]
          Length = 1369

 Score = 1507 bits (3902), Expect = 0.0
 Identities = 765/1057 (72%), Positives = 868/1057 (82%), Gaps = 3/1057 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVE+T RTVISPDPNLKITEV IPIL+A+VLTYPE VS YNIEK
Sbjct: 330  RLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMARVLTYPERVSNYNIEK 389

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+ V NGP KYPGANF+    GS  +LRY  ++  A+ LKYG  VERHLEDGD+VLFNR
Sbjct: 390  LRQLVRNGPSKYPGANFVLRPDGSKVHLRYVDKRDIANELKYGYVVERHLEDGDIVLFNR 449

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 450  QPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 509

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMCSYMGDAMD IDLPTPA
Sbjct: 510  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPIDLPTPA 569

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            +IKP+ELWTGKQLFNVLIRP+A  RVF+NL V EK Y+K  ET+CPNDG VYFRNSELIC
Sbjct: 570  IIKPIELWTGKQLFNVLIRPNANTRVFLNLIVKEKIYSKS-ETMCPNDGCVYFRNSELIC 628

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGLF+VLLRDY+ HAAASCMNRLAKLSARWIGNHGFSIGI DVQPG+
Sbjct: 629  GQLGKATLGNGNKDGLFAVLLRDYNPHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE 688

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
            +L+                 I  Y  G+L LQPGC+AAQTLE +ITG+LN IR  A  VC
Sbjct: 689  NLNQQKRKKINEGYRECHGHISSYSKGELILQPGCNAAQTLELKITGVLNQIRATAGNVC 748

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M  LHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA NGFIDR+LPHFP NS T
Sbjct: 749  MNELHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKT 808

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV NSFYTGLT TEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLSI+YD
Sbjct: 809  PAAKGFVANSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYD 868

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
             TVR+ASG +VQF+YGDDGMDP++MEGKDG PLNLD+L+MK+ ATCP R   +LSP EI 
Sbjct: 869  QTVRTASGSIVQFVYGDDGMDPAKMEGKDGIPLNLDQLFMKIMATCPLREQDTLSPAEIL 928

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDG- 1237
             ++  RLSK+DMTPEGGCS +FKK L D           FL K + +L N RR LQLD  
Sbjct: 929  HIMDDRLSKYDMTPEGGCSASFKKMLSD-----------FLHKRVAALCNIRRALQLDEN 977

Query: 1236 --EKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPGT 1063
              +K+    LE V+ANI+GI+ +QLQVFLETCISRYHLK+                EPGT
Sbjct: 978  HLQKQDYSVLESVAANISGISAKQLQVFLETCISRYHLKKIEAGGAIGAIGAQSIGEPGT 1037

Query: 1062 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCIE 883
            QMTLKTFHFAGVASMNVTLGVPRIKEIIN AKNISTPIITATL    D  SAR+V+  ++
Sbjct: 1038 QMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITATLVSDRDVLSARMVRSSLQ 1097

Query: 882  KTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQHV 703
            KTVLGE+A+++KI+  S Q  I+V LD+E I+   ++IS+ SVQQ+I  HPK KLK +H+
Sbjct: 1098 KTVLGEVAKAIKIVLKSSQPYIVVKLDMERIEALHMRISSQSVQQAILNHPKTKLKPEHI 1157

Query: 702  EVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRGKETGE 523
             VL + KL+I+ P  DR+K+ FELHSLK++LPKVIV GI TVERA+IN          G 
Sbjct: 1158 RVLGNNKLKIYPPEADRSKLQFELHSLKAVLPKVIVKGIATVERAVIN-------HANGV 1210

Query: 522  HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGHGMTI 343
            +NLLVEGTNL AVMGT G+DG  T SNHIIEVQ+T+GIEAAR+CII+EI YTM+ HGM+I
Sbjct: 1211 YNLLVEGTNLLAVMGTPGIDGSKTKSNHIIEVQQTIGIEAARQCIINEIQYTMRNHGMSI 1270

Query: 342  DIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEG 163
            D RHMMLL DLMT +GEVLGITRFGI KMK+SVLMLASFEKTA+HLFNAS +GR+D+IEG
Sbjct: 1271 DARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFEKTAEHLFNASYSGRNDQIEG 1330

Query: 162  VSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESI 52
            VSECIIMGIPMQ+GTGILK+RQR+E +P+L Y P+ I
Sbjct: 1331 VSECIIMGIPMQLGTGILKVRQRVEQLPELKYRPDPI 1367


>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
            acuminata subsp. malaccensis]
          Length = 1372

 Score = 1505 bits (3897), Expect = 0.0
 Identities = 762/1059 (71%), Positives = 869/1059 (82%), Gaps = 3/1059 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVE+T RTVISPDPNLKITEV IP+L+A+ LTYPE VS YNIEK
Sbjct: 333  RLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPVLMAKKLTYPERVSAYNIEK 392

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+ + NGP KYPGANFI L  G+ Q+LRY  +K  A  LKYG  VERHLEDGDVVLFNR
Sbjct: 393  LRQRICNGPDKYPGANFILLGDGTKQHLRYVDKKTAASELKYGYIVERHLEDGDVVLFNR 452

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 453  QPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 512

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMCSYMGD+MD IDLP+PA
Sbjct: 513  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDSMDPIDLPSPA 572

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            +IKP+ELWTGKQLF+VLIRP+A+ +VF+NL V EK Y K  ET+CP+DG+VYFRNSELIC
Sbjct: 573  IIKPIELWTGKQLFSVLIRPNARTKVFLNLMVKEKIYTKS-ETMCPSDGYVYFRNSELIC 631

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGK TLGNGNKDGLFSVLLRDY++HAAASCMNRLAKLSARWIGNHGFSIGI DVQPG+
Sbjct: 632  GQLGKVTLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE 691

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L+               +LI  Y  GKL LQPGC+AAQTLE +ITG+LN IR  A  VC
Sbjct: 692  HLNQQKKKKIDEGYRECHELISLYGKGKLTLQPGCNAAQTLELKITGVLNQIRAIAGNVC 751

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M  LHWRNSPLIMSQCGSKGSP NI+QM++CVGQQSVGGRRA NGFIDR+LPHFP NS T
Sbjct: 752  MNELHWRNSPLIMSQCGSKGSPINISQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKT 811

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLSI+YD
Sbjct: 812  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYD 871

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
             TVR+ASGG+VQFLYGDDGMDP++MEGKDG PLN+D+L+MKV ATCP R H  LSPTE  
Sbjct: 872  ETVRNASGGIVQFLYGDDGMDPAKMEGKDGIPLNMDQLFMKVMATCPPREHDMLSPTEAL 931

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGE 1234
             ++  RL+K+DM+PEGGCS AFKK L D           F+ K +++L N R+ L+LD  
Sbjct: 932  RIMDDRLAKYDMSPEGGCSAAFKKLLSD-----------FVHKRVSALANMRKSLKLDET 980

Query: 1233 KRG---SESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPGT 1063
              G   S  LE V+A I+GI+ +QL+VFLETCISRYH K+                EPGT
Sbjct: 981  DMGRKDSTVLENVAAKISGISSKQLEVFLETCISRYHSKKVEAGAAIGAIGAQSIGEPGT 1040

Query: 1062 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCIE 883
            QMTLKTFHFAGVASMNVTLGVPRIKEIIN +KNISTPI+TATL    D  SAR+V+ CIE
Sbjct: 1041 QMTLKTFHFAGVASMNVTLGVPRIKEIINASKNISTPIVTATLLNGRDVLSARVVKSCIE 1100

Query: 882  KTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQHV 703
            KTVLGE+A+++KI+  S +  I+V LD++LI+   +++SA SV  SI  HPK KLK++H+
Sbjct: 1101 KTVLGEVAKALKIVLKSSRPYIVVKLDMDLIEALHMRVSAESVCHSILNHPKIKLKSEHI 1160

Query: 702  EVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRGKETGE 523
              +   KL+I+ P  DR K+ FE+HSLK+MLPKVIV GIPTVERA+IN       +  G 
Sbjct: 1161 NNIGSDKLKIYPPEADRRKLQFEMHSLKAMLPKVIVKGIPTVERAVIN-------ETNGV 1213

Query: 522  HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGHGMTI 343
            +NLLVEGTNL AVMGT G+D   T SNH+IEVQ TLGIEAAR+CII+EI YTM+GHGM+I
Sbjct: 1214 YNLLVEGTNLLAVMGTPGIDASKTRSNHVIEVQRTLGIEAARQCIINEIQYTMRGHGMSI 1273

Query: 342  DIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEG 163
            D RHMMLL DLMT KGEVLGITRFGI KMKESVLMLASFEKTA+HLFNAS  GRDD+IEG
Sbjct: 1274 DTRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYGGRDDQIEG 1333

Query: 162  VSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            VSECIIMGIPMQ+GTGILK+RQR+E +P+L Y P+ I S
Sbjct: 1334 VSECIIMGIPMQLGTGILKVRQRVEKLPELKYAPDPIIS 1372


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score = 1452 bits (3760), Expect = 0.0
 Identities = 751/1063 (70%), Positives = 860/1063 (80%), Gaps = 7/1063 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEK
Sbjct: 341  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEK 400

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA FI+   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNR
Sbjct: 401  LRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNR 460

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 461  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 520

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPK+GEILVASTQDFLTSSFLITR+DTFY+RASFSL+CSYMGD MD IDLPTPA
Sbjct: 521  VQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPA 580

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            LIKPVELWTGKQLF VL+RP+++MRV+VNLTV EKSY+   ET+CP+DGFVYFRNSELI 
Sbjct: 581  LIKPVELWTGKQLFGVLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELIS 640

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+
Sbjct: 641  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 700

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L                  I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +C
Sbjct: 701  ILVKQKLEEIHQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 760

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  
Sbjct: 761  MKALHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKF 820

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV +SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 821  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 880

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            NTVR+AS  ++QF+YGDDGMDPS+ME K G PLN  RL+MKVKATCP RG  SLS +EI 
Sbjct: 881  NTVRNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEIC 940

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCIT-SLKNTRRDLQLDG 1237
            E+V  RLS HDM+PEGGCS+AF+ SL D           FL K +  +LK  R  L LDG
Sbjct: 941  EIVNERLSYHDMSPEGGCSEAFRASLSD-----------FLIKHLAETLKRLREALLLDG 989

Query: 1236 EKRGS---ESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPG 1066
            E+      E LE ++ NI+GIT +QLQVFL  CISRYHLKR                EPG
Sbjct: 990  EQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPG 1049

Query: 1065 TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCI 886
            TQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIITA L    +  +AR+++  I
Sbjct: 1050 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKARI 1109

Query: 885  EKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQH 706
            EKT+LG++A+S+KI+  SR A I +TLD+E IQ SQL I A++V+QSI + PK KLK Q 
Sbjct: 1110 EKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKEQQ 1169

Query: 705  VEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINK--LKDKRGKE 532
            V+VLN RKL +  P  ++ K+HFELH LK+ LP V+V GI TV+RA++NK   +D++   
Sbjct: 1170 VKVLNHRKLEVF-PQANKDKLHFELHRLKNKLPVVVVKGITTVQRAVVNKEQERDRKSDV 1228

Query: 531  TGE-HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGH 355
             GE + LLVEGT L AVMG  GVDG NT SNHI+EVQ+ LGIEAAR  IIDEINYTM  H
Sbjct: 1229 KGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSSH 1288

Query: 354  GMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDD 175
            GMTID+RHMMLL DLMT KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNASVNGRDD
Sbjct: 1289 GMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDD 1348

Query: 174  KIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            KIEGVSECIIMGIPMQIGTG+ K+RQ ++ V +L+Y  E + S
Sbjct: 1349 KIEGVSECIIMGIPMQIGTGMFKLRQCVQQV-ELNYQSEPMLS 1390


>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Amborella trichopoda] gi|548832896|gb|ERM95665.1|
            hypothetical protein AMTR_s00023p00196820 [Amborella
            trichopoda]
          Length = 1383

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 748/1062 (70%), Positives = 855/1062 (80%), Gaps = 8/1062 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFR NL GKRV++T RTVISPDPNLKITEV IP L+AQ+LTY E V+ +NIEK
Sbjct: 340  RLKGKQGRFRSNLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEK 399

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGANF+ ++ G   +LRYG +K  AD LK+GD VERHLEDG++VLFNR
Sbjct: 400  LRQCVRNGPVKYPGANFV-ISGGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNR 458

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 459  QPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMG 518

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQ+NLCTPKNGEILVASTQDFLTSS+LITR+DTFYDRA+FSLMCSYMGD M+ IDLPTPA
Sbjct: 519  VQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPA 578

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            L+KPVELWTGKQLF+VLIRPHA M+V+VNL++ EK+Y+KG ET+C NDGFVY RNSELI 
Sbjct: 579  LLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELIS 638

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGLFSVLLRDY++HAAASCMNRLAKLSARWIGNHGFSIGI DV PG 
Sbjct: 639  GQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGS 698

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L+                 I+ Y  GKL L+PGC+AAQTLEAEIT +LN IR+ AA VC
Sbjct: 699  HLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVC 758

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            ME LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPRN  T
Sbjct: 759  MEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKT 818

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV NSFYTGLTA EFFFHTMGGREGLVDTAVKTADTGY+SRRLIK+LEDLS HYD
Sbjct: 819  PAAKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYD 878

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            +TVR++SG ++QF YGDDGMDP++MEGK G PLNLDRL+MK+KATCPA   +SLSP+EI 
Sbjct: 879  DTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEIS 938

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDG- 1237
             +V  RLSKHDMTPE GCS AFK+ L             F+ K + ++K TR  L LD  
Sbjct: 939  TIVNDRLSKHDMTPERGCSMAFKEEL-----------SNFIKKRMDAIKKTRNMLGLDED 987

Query: 1236 --EKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPGT 1063
              +K     LE V+ANI+GI+ QQL+VFLETCISRYHLKR                EPGT
Sbjct: 988  CVDKEKFSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGT 1047

Query: 1062 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCIE 883
            QMTLKTFHFAGVASMN+TLGVPRIKEI+  +K ISTPIITATL C ND KSAR+V+G IE
Sbjct: 1048 QMTLKTFHFAGVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIE 1107

Query: 882  KTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKA-----KL 718
            KT+LGE+A+++KI  T  QA I +TLD++ I+  Q+ I A +V  SI  + KA     KL
Sbjct: 1108 KTLLGEVAKTVKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKL 1167

Query: 717  KAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRG 538
            K +    L D KL+I  P   R ++ + LH L+S+LPK+IV GIPTVERA+IN +K    
Sbjct: 1168 KVKPTFTLPD-KLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVK---- 1222

Query: 537  KETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKG 358
               G+ NLLVEGTNL AVMGT GVDG NTTSNHI+EV+ TLGIEAARK IIDEI YTMK 
Sbjct: 1223 ---GKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKS 1279

Query: 357  HGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRD 178
            HGM+ID+RHMMLL DLMT +G VLGI RFGI KMKESVLMLASFE+TAD LF+A+  GR 
Sbjct: 1280 HGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRV 1339

Query: 177  DKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESI 52
            D I GVSECIIMG+PMQIGTGIL ++QR E + +L YGP+ I
Sbjct: 1340 DTIAGVSECIIMGVPMQIGTGILSVQQRPEQLAKLTYGPDPI 1381


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 742/1074 (69%), Positives = 854/1074 (79%), Gaps = 18/1074 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNL GKRVE+T RTVISPDPNLKITEV +PI +A++LTYPE V+++NIEK
Sbjct: 339  RLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEK 398

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV+NGP KYPGA  +R   GS+++L    RK  AD LKYG+ VERHLEDGDVVLFNR
Sbjct: 399  LRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNR 458

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HR ++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMG
Sbjct: 459  QPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMG 518

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPA
Sbjct: 519  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPA 578

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYN------KGRETLCPNDGFVYFR 2332
            L+KP+ELWTGKQLF+VL+RPHA M+V++NLTV EKSY+      K RET+CPNDGFVYFR
Sbjct: 579  LVKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFR 638

Query: 2331 NSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGIS 2152
            NSELI GQ+GKATLGNGNKDGL+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGI 
Sbjct: 639  NSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGID 698

Query: 2151 DVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIRE 1972
            DVQPG  L                K I  + TG L  + GCDAAQ+LE++IT ILN IRE
Sbjct: 699  DVQPGDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIRE 758

Query: 1971 KAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHF 1792
              A VCM+NLHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA +GFIDRSLPHF
Sbjct: 759  ATANVCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHF 818

Query: 1791 PRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 1612
             R + TP AKGFV NSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 1611 LSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSL 1432
            LSIHYD++VR+A G +VQF YGDDGMDP++MEGK G PLN +RL++K KATCP+ G+  L
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKIL 938

Query: 1431 SPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRD 1252
            SP+E  E V  RLSK D +PE GCS AF  SL             FL K + + K +   
Sbjct: 939  SPSEFSETVEDRLSKDDASPECGCSPAFVGSLKI-----------FLNKYVEAQKKSWGT 987

Query: 1251 LQLDGEKRGSESL------------EKVSANIAGITLQQLQVFLETCISRYHLKRXXXXX 1108
            L  D E    +S+             KV  NIAG+T +QLQVFL+TC+SRYH K+     
Sbjct: 988  LLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGT 1047

Query: 1107 XXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLEC 928
                       EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK ISTPI+TA L  
Sbjct: 1048 AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTH 1107

Query: 927  KNDAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQ 748
             ++   AR+V+  IEKT LG+IA+ ++I+ +SR A I + LD+E I+ ++L + A+ V+Q
Sbjct: 1108 DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQ 1167

Query: 747  SIWRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERA 568
            +I   PK KLK +H+ VL+DRKLR+     DR K+HF LH LK+MLP V+V GI TV RA
Sbjct: 1168 AILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRA 1227

Query: 567  IINKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCI 388
            +I + KDK  +   + +LLVEGT L+AVMGT GVDGCNT SNHIIEVQ+ LGIEAARKCI
Sbjct: 1228 VIKEEKDK-ARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCI 1286

Query: 387  IDEINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADH 208
            I+EI YTM+ HGM+IDIRHMMLLGDLMT +GEVLGITRFGIQKM +SVLMLASFEKTADH
Sbjct: 1287 IEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1346

Query: 207  LFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            LFNASVNGRDDKIEGVSEC+IMGIPM +GTG+LK+RQR+    QL YGP +I S
Sbjct: 1347 LFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAILS 1400


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
            gi|937914934|dbj|BAS89853.1| Os04g0492300 [Oryza sativa
            Japonica Group]
          Length = 1383

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 738/1065 (69%), Positives = 857/1065 (80%), Gaps = 9/1065 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGK GRFRGNLSGKR EYT RTVISPDPNL+ITEV IPIL+A+VLTYPE VS YNIEK
Sbjct: 333  RLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEK 392

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP K+PGANFI    G+  +L+Y  R+  A  LKYG  VERHLEDGD+VLFNR
Sbjct: 393  LRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNR 452

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 453  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 512

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFL+TR+D FYDR+SFSL+CSY+GDAM+ IDLPTPA
Sbjct: 513  VQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPA 572

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGR------ETLCPNDGFVYFR 2332
            LIKP+ELWTGKQLF+VL+RP+A  +VF+NLTV EK Y   +      E +CPNDGFVYFR
Sbjct: 573  LIKPIELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFR 632

Query: 2331 NSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGIS 2152
            NSEL+ GQ+GKATLGNGNKDG+FS L+RDY++HAAASCMNRLAK SAR+IGNHGFSIG+ 
Sbjct: 633  NSELLSGQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 692

Query: 2151 DVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIRE 1972
            DVQPG+ L+                LI  Y  G L LQPGC+AAQTLE  IT +LN IRE
Sbjct: 693  DVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIRE 752

Query: 1971 KAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHF 1792
            +A  VCM  LHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA NGFIDR+LPHF
Sbjct: 753  EAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHF 812

Query: 1791 PRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 1612
            P NS TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LED
Sbjct: 813  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 872

Query: 1611 LSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSL 1432
            LS+ YD TVR+ASGG+VQFLYGDDGMDP++MEGKDG PLNLD+L+MKV ATCP RG ++L
Sbjct: 873  LSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTL 932

Query: 1431 SPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRD 1252
            SP EI +++  +LS+HD + + GCS+ FK+ L             FL   I  LK+TRR 
Sbjct: 933  SPGEILQILNDKLSEHDASSDDGCSEKFKQLLT-----------YFLEDRIKLLKSTRRA 981

Query: 1251 LQLDGE---KRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXX 1081
            L LD +   +R S   E ++ANI+GI+++QLQVFL+TC+SRYHLK+              
Sbjct: 982  LLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQS 1041

Query: 1080 XXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARL 901
              EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPIITA L  + D  SAR+
Sbjct: 1042 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARI 1101

Query: 900  VQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAK 721
            V+G +EK VLGE+AE++KI+  S Q  ++V LD++ I+   + ISA SVQ SI  HPK K
Sbjct: 1102 VKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIK 1161

Query: 720  LKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKR 541
            LK++HV V++  KLRI+    D++K+ +ELH LKSMLPKVIV GIPTVERA+I++  ++ 
Sbjct: 1162 LKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEEN 1221

Query: 540  GKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMK 361
             K    + LLVEGTNL AVMGT GVD   T SNHI+EV  TLGIEAAR+ IIDEI YTMK
Sbjct: 1222 DK---RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMK 1278

Query: 360  GHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGR 181
             HGM ID RHMMLL DLMT KGE+LGITR+GI KMK SVLMLASFEKTA+HLFNAS +GR
Sbjct: 1279 SHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGR 1338

Query: 180  DDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            +D+IEGVSECIIMGIPMQ+GTGILK+RQRL+H+P+  Y P+ I +
Sbjct: 1339 EDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1383


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score = 1448 bits (3749), Expect = 0.0
 Identities = 747/1063 (70%), Positives = 857/1063 (80%), Gaps = 7/1063 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEK
Sbjct: 341  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEK 400

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA FI+   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNR
Sbjct: 401  LRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNR 460

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 461  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 520

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPK+GEILVASTQDFLTSSFLITR+DTFYDRASFSL+CSYMGD MD IDLPTPA
Sbjct: 521  VQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPA 580

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            LIKPVELWTGKQLF VL+RP+++MRV+VNLTV EKSY+   ET+CP+DGFVYFRNSELI 
Sbjct: 581  LIKPVELWTGKQLFGVLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELIS 640

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+
Sbjct: 641  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 700

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
            +L                  I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +C
Sbjct: 701  NLVKQKQEEIYQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKIC 760

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  
Sbjct: 761  MKALHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKF 820

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV +SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 821  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 880

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            NTVR+AS  ++QF+YGDDGMDPS+ME K G PLN  RL+MKVKATCP RG   LS +EI 
Sbjct: 881  NTVRNASASIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEIC 940

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGE 1234
            E+V  RLS HDM+PEGGCS+AF+ SL D           FL K +       R+  L GE
Sbjct: 941  EIVNERLSYHDMSPEGGCSEAFRASLSD-----------FLIKNLAETLKRLREALLLGE 989

Query: 1233 KR----GSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPG 1066
            ++      E LE V+ NI+GIT +QLQVFL  CISRYHLKR                EPG
Sbjct: 990  EQYAGGDREYLENVALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPG 1049

Query: 1065 TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCI 886
            TQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIITA L    +  +AR+++  I
Sbjct: 1050 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKARI 1109

Query: 885  EKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQH 706
            EKT+LG++A+S+KI+  SR A I +TLD+E IQ SQL I A++V+QSI + PK KLK Q 
Sbjct: 1110 EKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKEQQ 1169

Query: 705  VEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINK--LKDKRGKE 532
            V+VLN RKL +  P  ++ K+HFELH LK+ LP V+V GI TV+RA++NK   +D++   
Sbjct: 1170 VKVLNPRKLEVF-PQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQERDRKSDV 1228

Query: 531  TGE-HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGH 355
             GE + LLVEGT L AVMG  GVDG NT SNHI+EVQ+ LGIEAAR  IIDEINYTM  H
Sbjct: 1229 KGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSSH 1288

Query: 354  GMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDD 175
            GMTID+RHMMLL DLMT KGEVLGITR G+QKMK+SVLMLASFEKT DHLF+ASVNGRDD
Sbjct: 1289 GMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFSASVNGRDD 1348

Query: 174  KIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            KIEGVSECIIMGIPMQIGTG+ K+RQ ++ V +L+Y  E + S
Sbjct: 1349 KIEGVSECIIMGIPMQIGTGMFKLRQCVQQV-ELNYQSEPMLS 1390


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score = 1448 bits (3748), Expect = 0.0
 Identities = 746/1046 (71%), Positives = 850/1046 (81%), Gaps = 7/1046 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEK
Sbjct: 341  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEK 400

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA FI+   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNR
Sbjct: 401  LRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNR 460

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 461  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 520

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPK+GEILVASTQDFLTSSFLITR+DTFY+RASFSL+CSYMGD MD IDLPTPA
Sbjct: 521  VQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPA 580

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            LIKPVELWTGKQLF VL+RP+++MRV+VNLTV EKSY+   ET+CP+DGFVYFRNSELI 
Sbjct: 581  LIKPVELWTGKQLFGVLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELIS 640

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+
Sbjct: 641  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 700

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L                  I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +C
Sbjct: 701  ILVKQKLEEIHQNYKKCEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 760

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  
Sbjct: 761  MKALHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKF 820

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV +SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 821  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 880

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            NTVR+AS  ++QF+YGDDGMDPS+ME K G PLN  RL+MKVKATCP RG  SLS +EI 
Sbjct: 881  NTVRNASTSIIQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEIC 940

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCIT-SLKNTRRDLQLDG 1237
            E+V  RLS HDM+PEGGCS+AF+ SL D           FL K +  +LK  R  L LDG
Sbjct: 941  EIVNERLSYHDMSPEGGCSEAFRASLSD-----------FLIKHLAETLKRLREALLLDG 989

Query: 1236 EKRGS---ESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPG 1066
            E+      E LE ++ NI+GIT +QLQVFL  CISRYHLKR                EPG
Sbjct: 990  EQYAGGDREYLENIALNISGITKKQLQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPG 1049

Query: 1065 TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCI 886
            TQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIITA L    +  +AR+++  I
Sbjct: 1050 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITAKLLSAANLTAARMIKARI 1109

Query: 885  EKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKAQH 706
            EKT+LG++A+S+KI+  SR A I +TLD+E IQ SQL I A++V+QSI + PK KLK Q 
Sbjct: 1110 EKTLLGQVAKSVKIVMASRLASIAITLDMETIQVSQLCIDAYTVKQSILQTPKIKLKEQQ 1169

Query: 705  VEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINK--LKDKRGKE 532
            V+VLN RKL +  P  ++ K+HFELH LK+ LP V+V GI TV+RA++NK   +D++   
Sbjct: 1170 VKVLNHRKLEVF-PQANKDKLHFELHRLKNKLPVVVVKGITTVQRAVVNKEQERDRKSDV 1228

Query: 531  TGE-HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKGH 355
             GE + LLVEGT L AVMG  GVDG NT SNHI+EVQ+ LGIEAAR  IIDEINYTM  H
Sbjct: 1229 KGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSSH 1288

Query: 354  GMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRDD 175
            GMTID+RHMMLL DLMT KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNASVNGRDD
Sbjct: 1289 GMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDD 1348

Query: 174  KIEGVSECIIMGIPMQIGTGILKIRQ 97
            KIEGVSECIIMGIPMQIGTG+ K+RQ
Sbjct: 1349 KIEGVSECIIMGIPMQIGTGMFKLRQ 1374


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score = 1447 bits (3746), Expect = 0.0
 Identities = 745/1074 (69%), Positives = 853/1074 (79%), Gaps = 18/1074 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNL GKRVE+T RTVISPDPNLKITEV +PI +A++LTYPE V+ +NIEK
Sbjct: 339  RLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTSHNIEK 398

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV+NGP KYPGA  +R   GS+++L    RK  AD LKYG+ VERHLEDGDVVLFNR
Sbjct: 399  LRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNR 458

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HR ++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMG
Sbjct: 459  QPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMG 518

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMCSYMGD MD IDLPTPA
Sbjct: 519  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLIDLPTPA 578

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYN------KGRETLCPNDGFVYFR 2332
            LIKP+ELWTGKQLF+VL+RPHA M+V++NLTV EKSY+      K RET+CPNDGFVYFR
Sbjct: 579  LIKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFR 638

Query: 2331 NSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGIS 2152
            NSELI GQ+GKATLGNGNKDGL+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGI 
Sbjct: 639  NSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGID 698

Query: 2151 DVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIRE 1972
            DVQPG  L                K I  + TG L  + GCDAAQ+LEA+IT ILN IRE
Sbjct: 699  DVQPGDQLVXKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLEAKITQILNGIRE 758

Query: 1971 KAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHF 1792
              A VCM+NLHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA +GFIDRSLPHF
Sbjct: 759  ATANVCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHF 818

Query: 1791 PRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 1612
             R + TP AKGFV NSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 1611 LSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSL 1432
            LSI+YD++VR+A G +VQF YGDDGMDP++MEGK G PLN +RL++K KATCP+ G+  L
Sbjct: 879  LSIYYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKIL 938

Query: 1431 SPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRD 1252
            SP+E  E V  RLSK D +PE GCS AF  SL             FL K I + K +   
Sbjct: 939  SPSEFSETVEDRLSKDDASPECGCSPAFIGSLKI-----------FLNKYIEAQKKSWST 987

Query: 1251 LQLDGEKRGSESL------------EKVSANIAGITLQQLQVFLETCISRYHLKRXXXXX 1108
            L  D E    +S+              V  NIAG+T +QLQVFL+TC+SRYH K+     
Sbjct: 988  LLADNETAVDKSIISSSDNDNIVIRNNVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGT 1047

Query: 1107 XXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLEC 928
                       EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK ISTPI+TA L  
Sbjct: 1048 AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTH 1107

Query: 927  KNDAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQ 748
             ++   AR+V+  IEKT LG+IA+ ++I+ +SR A I + LD+E I+ ++L + A+ V+Q
Sbjct: 1108 DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQ 1167

Query: 747  SIWRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERA 568
            +I   PK KLK +H+ VL+DRKLR+     DR K+HF LH LK+MLP V+V GI TV RA
Sbjct: 1168 AILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRA 1227

Query: 567  IINKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCI 388
            +I + KDK  +   + +LLVEGT L+AVMGT GVDGCNT SNHIIEVQ+ LGIEAARKCI
Sbjct: 1228 VIKEEKDK-ARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCI 1286

Query: 387  IDEINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADH 208
            I+EI YTM+ HGM+IDIRHMMLLGDLMT +GEVLGITRFGIQKM +SVLMLASFEKTADH
Sbjct: 1287 IEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1346

Query: 207  LFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            LFNASVNGRDDKIEGVSEC+IMGIPM +GTG+LK+RQR+    QL YGP +I S
Sbjct: 1347 LFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPRQLPYGPPAILS 1400


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
            lycopersicum]
          Length = 1390

 Score = 1447 bits (3746), Expect = 0.0
 Identities = 749/1061 (70%), Positives = 857/1061 (80%), Gaps = 9/1061 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+AQ+LTYPE VSQ+NIEK
Sbjct: 340  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEK 399

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA FIR   G+  +L +  RK YAD LK+G  V+RHLEDGD+VLFNR
Sbjct: 400  LRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNR 459

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 460  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPK+GEILVASTQDFLTSSFLITR+DTFY+RASFSL+CSYMGDAMD  DLP+PA
Sbjct: 520  VQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPA 579

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
             IKPVELWTGKQLF+VL+RP+++MRV+VNLT+ EKSY+   ET+C +DGFVYFRNSELI 
Sbjct: 580  FIKPVELWTGKQLFHVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELIS 639

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGL+SVLLRDY++HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+
Sbjct: 640  GQLGKATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 699

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
            +L                  I  +  GKL +QPGCDAAQTLEAE+T  LN +R+    +C
Sbjct: 700  NLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 759

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ L WRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  
Sbjct: 760  MKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKF 819

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV +SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 820  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            +TVR+AS  +VQF+YGDDGMDPSRME K G PLN  RL+MKVKATCP  G  SLS +EI 
Sbjct: 880  STVRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCIT-SLKNTRRDL---- 1249
            E+V  RLS HDMTPEGGCS+AF+ SL D           FL K +  +LKN R  L    
Sbjct: 940  EIVNERLSYHDMTPEGGCSEAFRASLSD-----------FLIKSLAETLKNLRESLLLGE 988

Query: 1248 -QLDGEKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXE 1072
             Q +G+ RG   LEK+  NI+GIT +QLQVFL TCISRYHLKR                E
Sbjct: 989  EQYEGDDRG--YLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGE 1046

Query: 1071 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQG 892
            PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIITA L    +  +AR+++ 
Sbjct: 1047 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKA 1106

Query: 891  CIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKA 712
             IEKT+LG++A+S+KI+  SR A I ++LD+E IQ SQL I A++V+QSI +  K KLK 
Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166

Query: 711  QHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINK--LKDKRG 538
              ++VLN RKL +  P  ++ K+HFELH LK+ LP V+V GI TV+RA++NK   KD++ 
Sbjct: 1167 HQIKVLNPRKLEVF-PQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKN 1225

Query: 537  KETGE-HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMK 361
               GE + LLVEGT L AVMG  GVDG  T SNHI+EVQ TLGIEAAR  IIDEINYTM 
Sbjct: 1226 DVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMS 1285

Query: 360  GHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGR 181
             HGMTID+RHMMLL DLMT KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNASVNGR
Sbjct: 1286 SHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGR 1345

Query: 180  DDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPE 58
            DDKIEGV+ECIIMGIPM IGTG+ K+RQR+EHV +L+Y P+
Sbjct: 1346 DDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHV-ELNYQPD 1385


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score = 1446 bits (3744), Expect = 0.0
 Identities = 738/1072 (68%), Positives = 856/1072 (79%), Gaps = 16/1072 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGK GRFRGNLSGKR EYT RTVISPDPNLKITEV IP+L+A+VLTYPE VS YNIEK
Sbjct: 333  RLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEK 392

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP KYPGANF+    G  Q+L+YG R+  A  LK G  VERHLEDGDVVLFNR
Sbjct: 393  LRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNR 452

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 453  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 512

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFL+TR+DTFYDR+SF+L+CSY+GDAM+ IDLPTPA
Sbjct: 513  VQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPA 572

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNK-------------GRETLCPN 2353
            LIKP+ELWTGKQLF+VL+RP+A  RVF+NL V EK Y+K             GRET+CPN
Sbjct: 573  LIKPIELWTGKQLFSVLVRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPN 632

Query: 2352 DGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNH 2173
            DG+VYFRNSEL+ GQ+GKATLGNGNKDGL+SVLLRDY++HAAASCMNRLAK SAR+IGNH
Sbjct: 633  DGYVYFRNSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNH 692

Query: 2172 GFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITG 1993
            GFSIG+ DVQPG+ L+                LI  +  G L L PGC+AAQTLE  ITG
Sbjct: 693  GFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITG 752

Query: 1992 ILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFI 1813
            +LN IR  A  VCM+ LHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA +GF+
Sbjct: 753  VLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFL 812

Query: 1812 DRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRR 1633
            +R+LPHFP NS TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRR
Sbjct: 813  NRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRR 872

Query: 1632 LIKALEDLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCP 1453
            L+K LEDLS+ YD TVR+ASGG+VQFLYGDDGMDP++MEGKDG PLNLD+L+MKV ATCP
Sbjct: 873  LMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCP 932

Query: 1452 ARGHSSLSPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITS 1273
             RG  +LSP  I +++  +L +HD + +GGCS+ FKK+L +           FL K I  
Sbjct: 933  QRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSEEFKKNLTE-----------FLDKRIEL 981

Query: 1272 LKNTRRDLQLDG---EKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXX 1102
            +K TRR L L     EK+ S   E V+A I+GI+ +QLQVFL+TC+SRY  K+       
Sbjct: 982  MKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASI 1041

Query: 1101 XXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKN 922
                     EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN A+ ISTPIITA L  K 
Sbjct: 1042 GAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKK 1101

Query: 921  DAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSI 742
            D  SAR+V+G +EK VLGE+A +++I+  S Q  ++V LD++LI+   + ISA SVQ SI
Sbjct: 1102 DVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSI 1161

Query: 741  WRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAII 562
              HPK KLK++HV V++  KLRI+    D+ K+  ELH+LKS+LPKVIV GIPTVER +I
Sbjct: 1162 LNHPKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVI 1221

Query: 561  NKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIID 382
            +++K K   ET  + LLVEGTNL AVMGT GVD   T SNHI+E  +TLGIEAAR+ IID
Sbjct: 1222 DEVKVK--NETERYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIID 1279

Query: 381  EINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLF 202
            EI YTMK HGM ID RHMMLL DLMT KGE+LGITR+GI KMK SVLMLASFEKT++HLF
Sbjct: 1280 EIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLF 1339

Query: 201  NASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            NAS +GR+D+IEGVSECIIMGIPMQ+GTGILK+RQRL+HVP+  Y P+ I S
Sbjct: 1340 NASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPILS 1391


>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
          Length = 1394

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 735/1075 (68%), Positives = 862/1075 (80%), Gaps = 19/1075 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGK GRFRGNLSGKR EYT RTVISPDPNL+ITEV IP+L+A+VLTYPE VS YN+EK
Sbjct: 333  RLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEK 392

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP K+PGANFI    G+  +L+YG R+ +A  LK G TVERHLEDGDVVLFNR
Sbjct: 393  LRQCIRNGPYKHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNR 452

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 453  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 512

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFL+TR+D FYDR+SF+L+CSY+GDAM+ IDLPTPA
Sbjct: 513  VQNNLCTPKNGEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPA 572

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNK----------------GRETL 2362
            LIKP+ELWTGKQLF+VL+RP+A+ +VF+NL V EK Y+K                GRET+
Sbjct: 573  LIKPIELWTGKQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETM 632

Query: 2361 CPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWI 2182
            CPNDG+VYFRNSEL+ GQ+GKATLGNGNKDG++SVLLRDY++HAAASCMNRLAK SAR+I
Sbjct: 633  CPNDGYVYFRNSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFI 692

Query: 2181 GNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAE 2002
            GNHGFSIG+ DVQPG+ L+                LI  +  G L L PGC+AAQTLE +
Sbjct: 693  GNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHK 752

Query: 2001 ITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMN 1822
            ITG+LN IR  A  VCM+ LHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA +
Sbjct: 753  ITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPD 812

Query: 1821 GFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYM 1642
            GFIDR+LPHFP NS TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYM
Sbjct: 813  GFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYM 872

Query: 1641 SRRLIKALEDLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKA 1462
            SRRL+K LEDLS+ YD TVR+ASGG+VQFLYGDDGMDP++MEGKDGTPLNLD+L+MKV A
Sbjct: 873  SRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTA 932

Query: 1461 TCPARGHSSLSPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKC 1282
            TCP RG  +LSP +I +++  +L++H  + +GGCS+ FK+ L             FL + 
Sbjct: 933  TCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKK-----------FLEER 981

Query: 1281 ITSLKNTRRDLQLDGEKRGSESL---EKVSANIAGITLQQLQVFLETCISRYHLKRXXXX 1111
            I  LK TR+ L LD +  G       E ++ANI+GI+ +QLQVFL+TC SRY+ K     
Sbjct: 982  IQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAG 1041

Query: 1110 XXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLE 931
                        EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPIIT  L 
Sbjct: 1042 ASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELL 1101

Query: 930  CKNDAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQ 751
             + D  SAR+V+G +EK VLGE+A ++KI+  S Q  ++V LD++LI+   + ISA SVQ
Sbjct: 1102 SRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQ 1161

Query: 750  QSIWRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVER 571
             SI  HPK KLK++HV V++  KLRI+    D++K+  ELH+LK+MLPKVIV GIPTVER
Sbjct: 1162 LSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVER 1221

Query: 570  AIINKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKC 391
             +I++ K K GK   ++NLLVEGTNL AVMGT GVD  NT SNHI+E+  TLGIEAAR+ 
Sbjct: 1222 VVIDERK-KEGK-LEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRS 1279

Query: 390  IIDEINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTAD 211
            IIDEI YTMK HGM ID+RHMMLL DLMT KGEVLGITR+GI KMK SVLMLASFEKT++
Sbjct: 1280 IIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSE 1339

Query: 210  HLFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTGILK+RQRL+H+P+L Y P+ I S
Sbjct: 1340 HLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQRLDHLPELKYQPDPILS 1394


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
            italica]
          Length = 1397

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 735/1075 (68%), Positives = 862/1075 (80%), Gaps = 19/1075 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGK GRFRGNLSGKR EYT RTVISPDPNL+ITEV IP+L+A+VLTYPE VS YN+EK
Sbjct: 336  RLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEK 395

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP K+PGANFI    G+  +L+YG R+ +A  LK G TVERHLEDGDVVLFNR
Sbjct: 396  LRQCIRNGPYKHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNR 455

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 456  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 515

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFL+TR+D FYDR+SF+L+CSY+GDAM+ IDLPTPA
Sbjct: 516  VQNNLCTPKNGEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPA 575

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNK----------------GRETL 2362
            LIKP+ELWTGKQLF+VL+RP+A+ +VF+NL V EK Y+K                GRET+
Sbjct: 576  LIKPIELWTGKQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETM 635

Query: 2361 CPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWI 2182
            CPNDG+VYFRNSEL+ GQ+GKATLGNGNKDG++SVLLRDY++HAAASCMNRLAK SAR+I
Sbjct: 636  CPNDGYVYFRNSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFI 695

Query: 2181 GNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAE 2002
            GNHGFSIG+ DVQPG+ L+                LI  +  G L L PGC+AAQTLE +
Sbjct: 696  GNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHK 755

Query: 2001 ITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMN 1822
            ITG+LN IR  A  VCM+ LHWRNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA +
Sbjct: 756  ITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPD 815

Query: 1821 GFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYM 1642
            GFIDR+LPHFP NS TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYM
Sbjct: 816  GFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYM 875

Query: 1641 SRRLIKALEDLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKA 1462
            SRRL+K LEDLS+ YD TVR+ASGG+VQFLYGDDGMDP++MEGKDGTPLNLD+L+MKV A
Sbjct: 876  SRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTA 935

Query: 1461 TCPARGHSSLSPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKC 1282
            TCP RG  +LSP +I +++  +L++H  + +GGCS+ FK+ L             FL + 
Sbjct: 936  TCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKK-----------FLEER 984

Query: 1281 ITSLKNTRRDLQLDGEKRGSESL---EKVSANIAGITLQQLQVFLETCISRYHLKRXXXX 1111
            I  LK TR+ L LD +  G       E ++ANI+GI+ +QLQVFL+TC SRY+ K     
Sbjct: 985  IQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAG 1044

Query: 1110 XXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLE 931
                        EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPIIT  L 
Sbjct: 1045 ASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELL 1104

Query: 930  CKNDAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQ 751
             + D  SAR+V+G +EK VLGE+A ++KI+  S Q  ++V LD++LI+   + ISA SVQ
Sbjct: 1105 SRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQ 1164

Query: 750  QSIWRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVER 571
             SI  HPK KLK++HV V++  KLRI+    D++K+  ELH+LK+MLPKVIV GIPTVER
Sbjct: 1165 LSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVER 1224

Query: 570  AIINKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKC 391
             +I++ K K GK   ++NLLVEGTNL AVMGT GVD  NT SNHI+E+  TLGIEAAR+ 
Sbjct: 1225 VVIDERK-KEGK-LEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRS 1282

Query: 390  IIDEINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTAD 211
            IIDEI YTMK HGM ID+RHMMLL DLMT KGEVLGITR+GI KMK SVLMLASFEKT++
Sbjct: 1283 IIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSE 1342

Query: 210  HLFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTGILK+RQRL+H+P+L Y P+ I S
Sbjct: 1343 HLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQRLDHLPELKYQPDPILS 1397


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1441 bits (3731), Expect = 0.0
 Identities = 748/1063 (70%), Positives = 857/1063 (80%), Gaps = 9/1063 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPIL+AQ+LTYPE VSQ+NIEK
Sbjct: 340  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEK 399

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA FIR   GS  +L +  RK +AD LK+G  V+RHLEDGD+VLFNR
Sbjct: 400  LRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNR 459

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 460  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPK+GEILVASTQDFLTSSFLITR+DTFY+RASFSL+CSYMGDAMD  DLP+PA
Sbjct: 520  VQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPA 579

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
             IKPVELWTGKQLF++L+RP+++MRV+VNLTV EKSY+   ET+CP+DGFVYFRNSELI 
Sbjct: 580  FIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELIS 639

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+
Sbjct: 640  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 699

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
            +L                  I  +  GKL +QPGCDAAQTLEAE+T  LN +R+    +C
Sbjct: 700  NLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 759

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ L WRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  
Sbjct: 760  MKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKF 819

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV +SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 820  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            +TVR+AS  +VQF+YGDDGMDPS+ME K G PLN  RL+MKVKATCP  G  SLS +EI 
Sbjct: 880  STVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCIT-SLKNTRRDL---- 1249
            E+V  RLS HDMTPEGGCS+AF+ SL D           FL K +  +LKN R  L    
Sbjct: 940  EIVNERLSYHDMTPEGGCSEAFRSSLSD-----------FLIKNLAETLKNLRESLLLGE 988

Query: 1248 -QLDGEKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXE 1072
             Q +G+ RG   LEK++ NI+GIT +QLQVFL TCISRYHLKR                E
Sbjct: 989  EQYEGDDRG--YLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGE 1046

Query: 1071 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQG 892
            PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIIT  L    +  +AR+++ 
Sbjct: 1047 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKA 1106

Query: 891  CIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKAKLKA 712
             IEKT+LG++A+S+KI+  SR A I ++LD+E IQ SQL I A++V+QSI +  K KLK 
Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166

Query: 711  QHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINK--LKDKRG 538
              ++VLN RKL +  P  ++ K+HFELH LK+ LP V+V GI TV+RA++NK   KD++ 
Sbjct: 1167 HQIKVLNPRKLEVF-PQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKN 1225

Query: 537  KETGE-HNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMK 361
               GE + LLVEGT L AVMG  GVDG  T SNHI+EVQ TLGIEAAR  IIDEINYTM 
Sbjct: 1226 DVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMS 1285

Query: 360  GHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGR 181
             HGMTID+RHMMLL DLMT KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNASVNGR
Sbjct: 1286 SHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGR 1345

Query: 180  DDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESI 52
            DDKIEGV+ECIIMGIPM IGTG+ K+RQR+E V +L+Y P+ I
Sbjct: 1346 DDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQV-ELNYQPDPI 1387


>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Amborella trichopoda]
          Length = 1367

 Score = 1438 bits (3723), Expect = 0.0
 Identities = 742/1048 (70%), Positives = 846/1048 (80%), Gaps = 8/1048 (0%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFR NL GKRV++T RTVISPDPNLKITEV IP L+AQ+LTY E V+ +NIEK
Sbjct: 340  RLKGKQGRFRSNLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEK 399

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGANF+ ++ G   +LRYG +K  AD LK+GD VERHLEDG++VLFNR
Sbjct: 400  LRQCVRNGPVKYPGANFV-ISGGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNR 458

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 459  QPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMG 518

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQ+NLCTPKNGEILVASTQDFLTSS+LITR+DTFYDRA+FSLMCSYMGD M+ IDLPTPA
Sbjct: 519  VQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPA 578

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            L+KPVELWTGKQLF+VLIRPHA M+V+VNL++ EK+Y+KG ET+C NDGFVY RNSELI 
Sbjct: 579  LLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELIS 638

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQLGKATLGNGNKDGLFSVLLRDY++HAAASCMNRLAKLSARWIGNHGFSIGI DV PG 
Sbjct: 639  GQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGS 698

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L+                 I+ Y  GKL L+PGC+AAQTLEAEIT +LN IR+ AA VC
Sbjct: 699  HLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVC 758

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            ME LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPRN  T
Sbjct: 759  MEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKT 818

Query: 1773 PDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 1594
            P AKGFV NSFYTGLTA EFFFHTMGGREGLVDTAVKTADTGY+SRRLIK+LEDLS HYD
Sbjct: 819  PAAKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYD 878

Query: 1593 NTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPTEIF 1414
            +TVR++SG ++QF YGDDGMDP++MEGK G PLNLDRL+MK+KATCPA   +SLSP+EI 
Sbjct: 879  DTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEIS 938

Query: 1413 ELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDG- 1237
             +V  RLSKHDMTPE GCS AFK+ L             F+ K + ++K TR  L LD  
Sbjct: 939  TIVNDRLSKHDMTPERGCSMAFKEEL-----------SNFIKKRMDAIKKTRNMLGLDED 987

Query: 1236 --EKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXXXXXEPGT 1063
              +K     LE V+ANI+GI+ QQL+VFLETCISRYHLKR                EPGT
Sbjct: 988  CVDKEKFSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGT 1047

Query: 1062 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSARLVQGCIE 883
            QMTLKTFHFAGVASMN+TLGVPRIKEI+  +K ISTPIITATL C ND KSAR+V+G IE
Sbjct: 1048 QMTLKTFHFAGVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIE 1107

Query: 882  KTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKA-----KL 718
            KT+LGE+A+++KI  T  QA I +TLD++ I+  Q+ I A +V  SI  + KA     KL
Sbjct: 1108 KTLLGEVAKTVKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKL 1167

Query: 717  KAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIINKLKDKRG 538
            K +    L D KL+I  P   R ++ + LH L+S+LPK+IV GIPTVERA+IN +K    
Sbjct: 1168 KVKPTFTLPD-KLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVK---- 1222

Query: 537  KETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIIDEINYTMKG 358
               G+ NLLVEGTNL AVMGT GVDG NTTSNHI+EV+ TLGIEAARK IIDEI YTMK 
Sbjct: 1223 ---GKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKS 1279

Query: 357  HGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASVNGRD 178
            HGM+ID+RHMMLL DLMT +G VLGI RFGI KMKESVLMLASFE+TAD LF+A+  GR 
Sbjct: 1280 HGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRV 1339

Query: 177  DKIEGVSECIIMGIPMQIGTGILKIRQR 94
            D I GVSECIIMG+PMQIGTGIL ++QR
Sbjct: 1340 DTIAGVSECIIMGVPMQIGTGILSVQQR 1367


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score = 1436 bits (3718), Expect = 0.0
 Identities = 729/1075 (67%), Positives = 853/1075 (79%), Gaps = 19/1075 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGK GRFRGNLSGKR EYT RTVISPDPNL+ITEV IPIL+A+VLTYPE VS YNIEK
Sbjct: 333  RLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEK 392

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+C+ NGP K+PGANFI    G+  +L+Y  R+  A  LKYG  VERHLEDGD+VLFNR
Sbjct: 393  LRQCIRNGPHKHPGANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNR 452

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMG
Sbjct: 453  QPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMG 512

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFL+TR+D FYDR+SF+L+CSY+GDAM+ IDLPTPA
Sbjct: 513  VQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPA 572

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGRETLCPNDGFVYFRNSELIC 2314
            L+KP+ELWTGKQLF+VL+RP+A  +VF+NLTV EK Y+K RET+CPNDGFVYFRNSEL+ 
Sbjct: 573  LVKPIELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLS 632

Query: 2313 GQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGK 2134
            GQ+GK TLGNGNKDG+FS+L+RDY++HAAASCMNRLAK SAR+IGNHGFSIG+ DV+PG+
Sbjct: 633  GQVGKKTLGNGNKDGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGE 692

Query: 2133 SLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVC 1954
             L                 LI  +  G L LQPGC+AAQTLE +IT +LN IRE A  +C
Sbjct: 693  HLDQQKKKKIDEGYKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNIC 752

Query: 1953 MENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVT 1774
            M+ LHWRNSPLIMSQCGSKGSP NI+QM+ CVGQQSVGG RA NGFIDR+LPHFP NS T
Sbjct: 753  MDTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKT 812

Query: 1773 PDAKGFVENSFYTGLT-----------------ATEFFFHTMGGREGLVDTAVKTADTGY 1645
            P AKGFV NSFY GLT                 ATEFFFHTMGGREGLVDTAVKTA+TGY
Sbjct: 813  PAAKGFVANSFYNGLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGY 872

Query: 1644 MSRRLIKALEDLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVK 1465
            MSRRL+K LEDLS+ YD TVR+ASGG+VQFLYGDDGMDP++MEG+DG PLNLD+L+MKV 
Sbjct: 873  MSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVM 932

Query: 1464 ATCPARGHSSLSPTEIFELVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGK 1285
            ATCP RG ++LSP EI +++  +LS+HD + + GCS+ FK+ L D           FL  
Sbjct: 933  ATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLKD-----------FLED 981

Query: 1284 CITSLKNTRRDLQLDGEKRGSESL--EKVSANIAGITLQQLQVFLETCISRYHLKRXXXX 1111
             I  LK+TRR L LD    G +S   E ++ANI+GI+ +QLQVFL+TC+SRYH K+    
Sbjct: 982  RIKLLKSTRRALCLDENHVGKDSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAG 1041

Query: 1110 XXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLE 931
                        EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPIITA L 
Sbjct: 1042 ASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELL 1101

Query: 930  CKNDAKSARLVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQ 751
               D  SAR+V+G +EK VLGE+AE +KI+  S Q  ++V LD++ I+   + ISA SVQ
Sbjct: 1102 SGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQ 1161

Query: 750  QSIWRHPKAKLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVER 571
             SI  HP+ KLK++HV V++  KLR++    D++K+ +ELH+LKSMLPKVIV GIPTVER
Sbjct: 1162 LSILNHPRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVER 1221

Query: 570  AIINKLKDKRGKETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKC 391
            A+I++  DK       ++LLVEGTNL AVMGT GVD   T SNHI+EV  TLGIEAAR+ 
Sbjct: 1222 AVISQTGDK-------YSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRS 1274

Query: 390  IIDEINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTAD 211
            IIDEI YTM  HGM ID RHMMLL DLMT KGE+LGITR+GI KMK SVLMLASFEKTA+
Sbjct: 1275 IIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAE 1334

Query: 210  HLFNASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTGILK+RQRL+H+P+  Y P+ I +
Sbjct: 1335 HLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1389


>ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Eucalyptus grandis]
          Length = 1402

 Score = 1432 bits (3708), Expect = 0.0
 Identities = 744/1072 (69%), Positives = 853/1072 (79%), Gaps = 16/1072 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPI +A++LTYPE V+QYNIEK
Sbjct: 342  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIQMARILTYPERVNQYNIEK 401

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA  IR   G ++ L    RK  AD L +G  V+RHLEDGDVVLFNR
Sbjct: 402  LRQCVRNGPYKYPGARMIRYPDGEMRLLMGSFRKRLADELGFGVIVDRHLEDGDVVLFNR 461

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEAR EALMLMG
Sbjct: 462  QPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARAEALMLMG 521

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+D FYDRA+FSL+CSYMGD MD IDLPTPA
Sbjct: 522  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPA 581

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGR-------ETLCPNDGFVYF 2335
            +IKP+ELWTGKQ+F+VL+RP+A+MRVFVNLT+ EK+Y+K +       ET+CPNDGFVYF
Sbjct: 582  IIKPIELWTGKQIFSVLLRPNARMRVFVNLTLKEKNYSKPKNASERELETMCPNDGFVYF 641

Query: 2334 RNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGI 2155
            RNSELI GQLGKATLGNGNKDGL+S+LLRDY+AHAAASCMNRLAKLSARWIGNHGFSIGI
Sbjct: 642  RNSELISGQLGKATLGNGNKDGLYSILLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGI 701

Query: 2154 SDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIR 1975
             DVQP   L+               + IE Y  GKL+LQPGCDAAQTLEA ITGILN IR
Sbjct: 702  DDVQPDNDLNERKRETILNGYNSCDEKIELYNKGKLDLQPGCDAAQTLEAVITGILNQIR 761

Query: 1974 EKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPH 1795
             +   VCM+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPH
Sbjct: 762  NETGQVCMKKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPH 821

Query: 1794 FPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 1615
            FPR S TP AKGFV NSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE
Sbjct: 822  FPRQSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 881

Query: 1614 DLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSS 1435
            DLSIHYDNTVR+ASG +VQFLYGDDGMDP+ MEGK+G PLN DRL+MKVKATCP+R H  
Sbjct: 882  DLSIHYDNTVRNASGCIVQFLYGDDGMDPALMEGKNGFPLNFDRLFMKVKATCPSREHKY 941

Query: 1434 LSPTEIFELVVARLSKHDMTPEGGCSD---AFKKSLLDEEGFMQNKEGGFLGKCITSLKN 1264
            LSP EI  L+  +L + + TP+GG SD   AFKKS+  +   ++  E G   + I     
Sbjct: 942  LSPVEISALIEQKLPESESTPDGGLSDASKAFKKSV--KAFLLEEHEKG--SEIIMKFGE 997

Query: 1263 TRRDLQLDGEKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXX 1084
                   D      E++ +V+  I GIT  QL+ F++TC+SRYHLKR             
Sbjct: 998  -------DATVENQETVIRVAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQ 1050

Query: 1083 XXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSAR 904
               EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK I TPIITA L+  ++   AR
Sbjct: 1051 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKILTPIITAELDRDDNVNIAR 1110

Query: 903  LVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKA 724
            +V+  I+KTVLG+IA+S+K + TSR   I++TLD+  I+ SQL I A++V++SI + PK 
Sbjct: 1111 MVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIEDSQLCIDANTVRESIMQTPKI 1170

Query: 723  KLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIIN----K 556
            K K   + VL+  KL +  P+ DR K+HFELHSLK+MLP VIV GI TVERA++N    K
Sbjct: 1171 KPKQLQINVLDVTKLEV-VPLVDRGKLHFELHSLKNMLPNVIVKGIKTVERAVVNKGKEK 1229

Query: 555  LKDKRG--KETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIID 382
             KDK G  KE  +++L+VEGT L+ VMGT GVDG  T SNHIIE+Q+TLGIEAAR CII+
Sbjct: 1230 YKDKEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSNHIIEIQQTLGIEAARWCIIE 1289

Query: 381  EINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLF 202
            EI + M  HGM+IDIRHMMLL DLMT +GEVLGITRFGIQKM +SVLMLASFEKT+DHLF
Sbjct: 1290 EIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTSDHLF 1349

Query: 201  NASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            +AS +G+ DKIEGVSECIIMG+PMQ+GTGILK+ QR +  P+L Y  + I S
Sbjct: 1350 HASASGKADKIEGVSECIIMGVPMQLGTGILKVIQR-DEKPELTYASDPIIS 1400


>gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis]
          Length = 1184

 Score = 1432 bits (3708), Expect = 0.0
 Identities = 744/1072 (69%), Positives = 853/1072 (79%), Gaps = 16/1072 (1%)
 Frame = -1

Query: 3213 RLKGKQGRFRGNLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEK 3034
            RLKGKQGRFRGNLSGKRVEYT RTVISPDPNLKITEV IPI +A++LTYPE V+QYNIEK
Sbjct: 124  RLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIQMARILTYPERVNQYNIEK 183

Query: 3033 LRKCVANGPQKYPGANFIRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNR 2854
            LR+CV NGP KYPGA  IR   G ++ L    RK  AD L +G  V+RHLEDGDVVLFNR
Sbjct: 184  LRQCVRNGPYKYPGARMIRYPDGEMRLLMGSFRKRLADELGFGVIVDRHLEDGDVVLFNR 243

Query: 2853 QPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2674
            QPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEAR EALMLMG
Sbjct: 244  QPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARAEALMLMG 303

Query: 2673 VQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPA 2494
            VQNNLCTPKNGEILVASTQDFLTSSFLITR+D FYDRA+FSL+CSYMGD MD IDLPTPA
Sbjct: 304  VQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPA 363

Query: 2493 LIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYNKGR-------ETLCPNDGFVYF 2335
            +IKP+ELWTGKQ+F+VL+RP+A+MRVFVNLT+ EK+Y+K +       ET+CPNDGFVYF
Sbjct: 364  IIKPIELWTGKQIFSVLLRPNARMRVFVNLTLKEKNYSKPKNASERELETMCPNDGFVYF 423

Query: 2334 RNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGI 2155
            RNSELI GQLGKATLGNGNKDGL+S+LLRDY+AHAAASCMNRLAKLSARWIGNHGFSIGI
Sbjct: 424  RNSELISGQLGKATLGNGNKDGLYSILLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGI 483

Query: 2154 SDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIR 1975
             DVQP   L+               + IE Y  GKL+LQPGCDAAQTLEA ITGILN IR
Sbjct: 484  DDVQPDNDLNERKRETILNGYNSCDEKIELYNKGKLDLQPGCDAAQTLEAVITGILNQIR 543

Query: 1974 EKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPH 1795
             +   VCM+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPH
Sbjct: 544  NETGQVCMKKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPH 603

Query: 1794 FPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 1615
            FPR S TP AKGFV NSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE
Sbjct: 604  FPRQSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 663

Query: 1614 DLSIHYDNTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSS 1435
            DLSIHYDNTVR+ASG +VQFLYGDDGMDP+ MEGK+G PLN DRL+MKVKATCP+R H  
Sbjct: 664  DLSIHYDNTVRNASGCIVQFLYGDDGMDPALMEGKNGFPLNFDRLFMKVKATCPSREHKY 723

Query: 1434 LSPTEIFELVVARLSKHDMTPEGGCSD---AFKKSLLDEEGFMQNKEGGFLGKCITSLKN 1264
            LSP EI  L+  +L + + TP+GG SD   AFKKS+  +   ++  E G   + I     
Sbjct: 724  LSPVEISALIEQKLPESESTPDGGLSDASKAFKKSV--KAFLLEEHEKG--SEIIMKFGE 779

Query: 1263 TRRDLQLDGEKRGSESLEKVSANIAGITLQQLQVFLETCISRYHLKRXXXXXXXXXXXXX 1084
                   D      E++ +V+  I GIT  QL+ F++TC+SRYHLKR             
Sbjct: 780  -------DATVENQETVIRVAQKIGGITEGQLRAFIDTCMSRYHLKRIEAGSAIGAIGAQ 832

Query: 1083 XXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECKNDAKSAR 904
               EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK I TPIITA L+  ++   AR
Sbjct: 833  SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKILTPIITAELDRDDNVNIAR 892

Query: 903  LVQGCIEKTVLGEIAESMKIIFTSRQACILVTLDIELIQRSQLKISAHSVQQSIWRHPKA 724
            +V+  I+KTVLG+IA+S+K + TSR   I++TLD+  I+ SQL I A++V++SI + PK 
Sbjct: 893  MVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIEDSQLCIDANTVRESIMQTPKI 952

Query: 723  KLKAQHVEVLNDRKLRIHAPVDDRTKIHFELHSLKSMLPKVIVMGIPTVERAIIN----K 556
            K K   + VL+  KL +  P+ DR K+HFELHSLK+MLP VIV GI TVERA++N    K
Sbjct: 953  KPKQLQINVLDVTKLEV-VPLVDRGKLHFELHSLKNMLPNVIVKGIKTVERAVVNKGKEK 1011

Query: 555  LKDKRG--KETGEHNLLVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGIEAARKCIID 382
             KDK G  KE  +++L+VEGT L+ VMGT GVDG  T SNHIIE+Q+TLGIEAAR CII+
Sbjct: 1012 YKDKEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSNHIIEIQQTLGIEAARWCIIE 1071

Query: 381  EINYTMKGHGMTIDIRHMMLLGDLMTSKGEVLGITRFGIQKMKESVLMLASFEKTADHLF 202
            EI + M  HGM+IDIRHMMLL DLMT +GEVLGITRFGIQKM +SVLMLASFEKT+DHLF
Sbjct: 1072 EIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTSDHLF 1131

Query: 201  NASVNGRDDKIEGVSECIIMGIPMQIGTGILKIRQRLEHVPQLDYGPESIFS 46
            +AS +G+ DKIEGVSECIIMG+PMQ+GTGILK+ QR +  P+L Y  + I S
Sbjct: 1132 HASASGKADKIEGVSECIIMGVPMQLGTGILKVIQR-DEKPELTYASDPIIS 1182