BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00007423
         (1227 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB46871.2| retrotransposon protein, putative, Ty3-gypsy subc...   117   3e-23
gb|AAM01019.1|AC090488_19 Putative retroelement [Oryza sativa Ja...   117   3e-23
ref|XP_008671973.1| PREDICTED: uncharacterized protein LOC103649...   116   3e-23
ref|XP_012700015.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   115   6e-23
gb|ABA94439.1| retrotransposon protein, putative, Ty3-gypsy subc...   115   6e-23
gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]     115   8e-23
gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]     114   1e-22
gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subc...   114   1e-22
emb|CAH66904.1| H0823A09.5 [Oryza sativa Indica Group]                114   1e-22
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]                114   1e-22
gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subc...   114   2e-22
gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subc...   114   2e-22
gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group...   114   2e-22
gb|AAM74388.1|AC119149_3 Putative retroelement [Oryza sativa Jap...   114   2e-22
gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Jap...   114   2e-22
gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]         114   2e-22
gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa] gi...   113   3e-22
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc...   113   4e-22
gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group...   113   4e-22
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo...   113   4e-22

>gb|ABB46871.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1446

 Score =  117 bits (292), Expect = 3e-23
 Identities = 99/356 (27%), Positives = 151/356 (42%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKATQFRAPQGSHQRPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 294  TMIVRQYRPFNPSNFPQGSSGSQNHHGGQSNRGAAPRPPMAPAQSG---PSAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>gb|AAM01019.1|AC090488_19 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1475

 Score =  117 bits (292), Expect = 3e-23
 Identities = 99/356 (27%), Positives = 151/356 (42%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKATQFRAPQGSHQRPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 294  TMIVRQYRPFNPSNFPQGSSGSQNHHGGQSNRGAAPRPPMAPAQSG---PSAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>ref|XP_008671973.1| PREDICTED: uncharacterized protein LOC103649491 [Zea mays]
          Length = 1396

 Score =  116 bits (291), Expect = 3e-23
 Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
 Frame = -2

Query: 1004 GQLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRD 825
            G     + ++ P +F G+  NP +A++WL+  E  LE V  D    V     + RGP+  
Sbjct: 271  GSKIADFNRMQPPKFGGSD-NPIEADDWLREIEMKLEVVHADDRDKVLLAVQQLRGPALA 329

Query: 824  WWNAVIKAEGGT--ITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLR 651
            WW++  +  G    + W  F  +F +Q++P SV   K  EF  L +GGM+++ Y  KF  
Sbjct: 330  WWHSYREINGNANEMVWAEFVRIFREQHIPSSVMKLKKDEFRKLRQGGMTVTEYLHKFTE 389

Query: 650  LSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEME 471
            LSRY  E I  D+ K++ F+ GL+ E+R   + + + T+ D   + + +NR +  E+  +
Sbjct: 390  LSRYAPEDINDDDKKQEAFLGGLNPEIR---TLVEVTTHSD---FNNMVNRVITTERNRK 443

Query: 470  DQLVT*VRERPPQFSARQDPAKRQMMSF---PGQTFYIPPIRPWQPGSTSRPIAPRPPSV 300
             +L    R+R  +    Q   K Q   F   PGQ           PGS  +P +   P +
Sbjct: 444  AELSE--RKRRFEIKKPQQAEKFQKTQFPPHPGQRSQGAFSFKAHPGSFQKP-SQSAPVM 500

Query: 299  RPQGQTF*PQGRWMRFQQVRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKP 141
            + Q           R QQ   + LTN       C+ C +  H + +CP L +P
Sbjct: 501  KTQSN--------FRTQQSGGSQLTN----VRTCFHCREAGHYKANCPYLSQP 541


>ref|XP_012700015.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105914005
            [Setaria italica]
          Length = 1737

 Score =  115 bits (289), Expect = 6e-23
 Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 29/372 (7%)
 Frame = -2

Query: 1154 LMKSMADMREHQRLLEGRLGVLPPGN--NPINTGHAPMPDDMLVPLWKQHQFGQLFLQYL 981
            L + + DM     +   RL  +P G+  N       P P  +   L  Q +  +  +Q  
Sbjct: 8    LEEEVTDMEHDMMVRTARLSSIPSGSEDNRAPPPPPPPPPSLEAILAAQTELLRHIVQGQ 67

Query: 980  KLAP--------------EEFSGTPP-------NPEKAEEWLQHAEHVLEHVSND--RDT 870
            +  P              E+F GT P       +P  A+ W+   E   E ++     D 
Sbjct: 68   QHQPQGGRGHQQPQIARYEDFLGTQPPLFHKTEDPLDADAWIHILESKFELLTTPCTDDN 127

Query: 869  WVKFVTYRFRGPSRDWWN---AVIKAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSL 699
              +F   + RG +R WW+   A++ A+   ++WD FK  F   ++P+ + +RK +EF++L
Sbjct: 128  KARFAAQQLRGSARLWWDHYHAMLPADH-IVSWDEFKTAFRGHHIPEGLMERKLNEFLAL 186

Query: 698  TKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*T 519
            T+G   +  Y   F  L RY +    TDE K  +F RGL  E++++L+ +++       T
Sbjct: 187  TQGSRDVLHYAQAFNDLCRYASYHADTDEKKRDRFRRGLSLELKERLNPIKVD------T 240

Query: 518  YEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPG 339
            Y + +N  +  E  M+  L   ++ + P  S    PA++  M        +PP  P +P 
Sbjct: 241  YNELVNLAISQEDCMK-ALKADLKRKAPMISP-SPPARKFRM--------VPPSAPRRPA 290

Query: 338  STSRPIAPRPPSVRPQGQTF*PQGRWMRF-QQVRPATLTNSDSSFERCWECGKTDHLRRD 162
               R +A  PP   P+   F PQ          RPA       +  RC+ CG   H  +D
Sbjct: 291  QPGRWVARPPPPAAPRFPGFQPQVPQRNLPPPPRPA-------NGNRCFTCGNVGHFAKD 343

Query: 161  CPQLRKPPTGLS 126
            CP+ +    G S
Sbjct: 344  CPRNKNQRPGQS 355


>gb|ABA94439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1267

 Score =  115 bits (289), Expect = 6e-23
 Identities = 99/356 (27%), Positives = 150/356 (42%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 294  TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSS---PPAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1850

 Score =  115 bits (288), Expect = 8e-23
 Identities = 100/357 (28%), Positives = 150/357 (42%), Gaps = 29/357 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 297  HQQMHQRMMQHVEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 355

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 356  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCCSFRKAQVPDGVVAQ 415

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 416  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 472

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSF-PGQ---- 378
              Y D     D   R  D   +M+       + +  QF  R  P   Q   F PGQ    
Sbjct: 473  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQF--RAPPGSHQRPRFAPGQQGGP 524

Query: 377  -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQ 246
             T  +   RP+ P               G ++R  APRPP    Q     P  +  +   
Sbjct: 525  TTMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQSKKETG 581

Query: 245  VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
             +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 582  AKPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 628


>gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1708

 Score =  114 bits (286), Expect = 1e-22
 Identities = 99/356 (27%), Positives = 149/356 (41%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   ML    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 307  HQQMYQRMLQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 365

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 366  NLLQCNDQEKVAFTTHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 425

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K+++F+ GLD E+  QL     
Sbjct: 426  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQERFMAGLDDELTNQLIS--- 482

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 483  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFA-PGQQGGPT 535

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G  +R  APRPP    Q     P  +  +    
Sbjct: 536  TMIVRQYRPFHPSNFPQGASGSQNHHGGQPNRGAAPRPPMAPAQSG---PSAQARKETGA 592

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 593  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 638


>gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1364

 Score =  114 bits (286), Expect = 1e-22
 Identities = 100/356 (28%), Positives = 149/356 (41%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   ML    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMLQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  + + Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTATVYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRADQGSHQRPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 294  TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>emb|CAH66904.1| H0823A09.5 [Oryza sativa Indica Group]
          Length = 1716

 Score =  114 bits (286), Expect = 1e-22
 Identities = 102/357 (28%), Positives = 151/357 (42%), Gaps = 29/357 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 329  HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 387

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 388  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 447

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 448  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 504

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 505  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 557

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 246
            T  +   RP+ P               G  +R  APRPP    Q GQ            Q
Sbjct: 558  TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPVAPAQSGQP----------AQ 607

Query: 245  VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
             +  T     S    C+ CG+  H    CP+ R+     +Q  + +AS     + PE
Sbjct: 608  AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFNQARVNHASAEEAQAVPE 660


>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
          Length = 1421

 Score =  114 bits (286), Expect = 1e-22
 Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FGQL-----FLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG L       ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHVEQQHQHFGPLPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +G +  WW+     +  G  +TW  F   F   +VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGLASAWWDNHMATRPPGTEVTWAEFCRSFRKAHVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMSGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   ++   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQKPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 294  TMIVRQYRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRTGPRFIQARVNHASAEEAQAAPE 396


>gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1521

 Score =  114 bits (285), Expect = 2e-22
 Identities = 102/357 (28%), Positives = 149/357 (41%), Gaps = 29/357 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+ KQL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTKQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF + Q    R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRSNQGSQHRPRFT-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 246
            T  +   RP+ P               G  +R  APRPP    Q GQ            Q
Sbjct: 294  TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPMAPAQSGQP----------AQ 343

Query: 245  VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
             +  T     S    C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 344  AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1777

 Score =  114 bits (285), Expect = 2e-22
 Identities = 99/356 (27%), Positives = 149/356 (41%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 321  HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 379

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 380  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 439

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 440  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 496

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 497  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 549

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G  +R  APRPP    Q     P  +  +    
Sbjct: 550  TMIVRQHRPFNPSNFHPGSSGSQNHHGGQPNRGTAPRPPMAPAQSG---PPAQAKKETGA 606

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 607  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQTAPE 652


>gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group]
            gi|31430212|gb|AAP52158.1| retrotransposon protein,
            putative, Ty3-gypsy subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1719

 Score =  114 bits (284), Expect = 2e-22
 Identities = 107/358 (29%), Positives = 152/358 (42%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L + P  FS T  NP +A +WL   E  L
Sbjct: 312  HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLGVRPPTFSSTT-NPMEANDWLHAIEKKL 370

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 371  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 430

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL    I
Sbjct: 431  KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQL----I 486

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRER-PPQFSARQDPAKRQMMSFPGQ---- 378
              Y     Y D   R +D     EDQ     R+R   QF A Q   +R   + PGQ    
Sbjct: 487  SGY-----YAD-FERLVDKAIRQEDQRNKMDRKRKAAQFRAHQGSHQRPRFT-PGQQGGP 539

Query: 377  -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQ 249
             T  +   RP+ P               G  +R  APRPP    Q GQ            
Sbjct: 540  TTMIVRQHRPFNPSNFYQGTSDSQNHHGGQPNRGAAPRPPVASAQSGQP----------A 589

Query: 248  QVRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            Q +  T     S    C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 590  QAKKETEAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 643


>gb|AAM74388.1|AC119149_3 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1458

 Score =  114 bits (284), Expect = 2e-22
 Identities = 98/351 (27%), Positives = 144/351 (41%), Gaps = 23/351 (6%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   ML    +QHQ FG         ++L + P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMLQHAEQQHQQFGPPPPQSKLPEFLLVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFKKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFLAGLDDELTNQLISGDY 243

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQTFYIP 363
              +E          R +D     EDQ     R+R PQ  + Q P           T  + 
Sbjct: 244  ADFE----------RLVDKAIRQEDQRNKMDRKRAPQ-GSHQRPRFAPGQQGGPTTMIVH 292

Query: 362  PIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQVRPATL 228
              RP+ P               G  +R  APRPP    Q     P  +  +    +P + 
Sbjct: 293  QYRPFNPSNFPQGASGSQNHHGGQPNRGAAPRPPMAPAQSG---PSAQAKKETGAKPGS- 348

Query: 227  TNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
                     C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 349  ---------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 390


>gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Japonica Group]
            gi|108709291|gb|ABF97086.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1461

 Score =  114 bits (284), Expect = 2e-22
 Identities = 98/356 (27%), Positives = 150/356 (42%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHVEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NRLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFWKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 241  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFA-PGQQGGPT 293

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  A RPP    Q     P  +  +    
Sbjct: 294  TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAASRPPMAPAQSG---PPAQAKKETGA 350

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 351  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]
          Length = 1181

 Score =  114 bits (284), Expect = 2e-22
 Identities = 107/358 (29%), Positives = 152/358 (42%), Gaps = 30/358 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+  + +QHQ FG         ++L + P  FS T  NP +A +WL   E  L
Sbjct: 65   HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLGVRPPTFSSTT-NPMEANDWLHAIEKKL 123

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 124  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL    I
Sbjct: 184  KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQL----I 239

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRER-PPQFSARQDPAKRQMMSFPGQ---- 378
              Y     Y D   R +D     EDQ     R+R   QF A Q   +R   + PGQ    
Sbjct: 240  SGY-----YAD-FERLVDKAIRQEDQRNKMDRKRKAAQFRAHQGSHQRPRFT-PGQQGGP 292

Query: 377  -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQ 249
             T  +   RP+ P               G  +R  APRPP    Q GQ            
Sbjct: 293  TTMIVRQHRPFNPSNFYQGTSDSQNHHGGQPNRGAAPRPPVASAQSGQP----------A 342

Query: 248  QVRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            Q +  T     S    C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 343  QAKKETEAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 396


>gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa]
            gi|21321760|gb|AAM47295.1|AC122146_14 Putative
            polyprotein [Oryza sativa Japonica Group]
            gi|31430576|gb|AAP52470.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1819

 Score =  113 bits (283), Expect = 3e-22
 Identities = 102/357 (28%), Positives = 149/357 (41%), Gaps = 29/357 (8%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   M+    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 363  HQQMHQRMMQYAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 421

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 422  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 481

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 482  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 538

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + PGQ     
Sbjct: 539  GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAHQGSHQRPRFT-PGQQGGPT 591

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 246
            T  +   RP+ P               G  +R  APRPP    Q GQ            Q
Sbjct: 592  TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPMAPAQSGQP----------TQ 641

Query: 245  VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
             +  T     S    C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 642  AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 694


>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1672

 Score =  113 bits (282), Expect = 4e-22
 Identities = 99/356 (27%), Positives = 149/356 (41%), Gaps = 28/356 (7%)
 Frame = -2

Query: 1058 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 897
            H  M   ML    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L
Sbjct: 255  HQQMHQRMLQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 313

Query: 896  EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 723
              +  +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +
Sbjct: 314  NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWVEFCRSFRKAQVPDGVVAQ 373

Query: 722  KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 543
            K  EF +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL     
Sbjct: 374  KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 430

Query: 542  KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 378
              Y D     D   R  D   +M+       + +  QF A Q   +R   + P Q     
Sbjct: 431  GDYADVERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFA-PRQQGGPT 483

Query: 377  TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 243
            T  +   RP+ P               G ++R  APRPP    Q     P  +  +    
Sbjct: 484  TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQAKKETGA 540

Query: 242  RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
            +P +          C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 541  KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQAAPE 586


>gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|31430814|gb|AAP52680.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1796

 Score =  113 bits (282), Expect = 4e-22
 Identities = 108/411 (26%), Positives = 167/411 (40%), Gaps = 31/411 (7%)
 Frame = -2

Query: 1214 NTEESEGGSGQRIETGNMEILMK---SMADMREHQRLLEGRLGVLPPGNNPINTGHAPMP 1044
            N EE   G    I++GN    +    ++A +  HQ  +   +         +   H  M 
Sbjct: 291  NGEERADGVHPNIDSGNGPPPLPENPTLAQVMAHQTQMMAAM------MQQMQQQHQQMH 344

Query: 1043 DDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSN 882
              M+    +QHQ FG         ++L++ P  FS T  NP +A +WL   E  L  +  
Sbjct: 345  QRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKLNLLQC 403

Query: 881  DRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEF 708
            +    V F T++ +GP+  WW+     +  G  +TW  F   F    VPD V  +K  EF
Sbjct: 404  NDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREF 463

Query: 707  MSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYED 528
             +L +G  +++ Y  +F RL+RY  E + TD  K++KF+ GLD E+  QL       Y D
Sbjct: 464  RALHQGNRTVTEYLQEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS---GDYAD 520

Query: 527  A*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ-----TFYIP 363
                 D   R  D   +M+       + +  QF A Q   +R   + PGQ     T  + 
Sbjct: 521  FERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPTTMIVR 573

Query: 362  PIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQVRPATL 228
              RP+                 G  +R  APRPP    Q     P  +  +    +P + 
Sbjct: 574  QHRPFNSSNFHQGSSGSQNHHGGQPNRGAAPRPPMAPAQSG---PSAQAKKETGAKPGS- 629

Query: 227  TNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPE 75
                     C+ CG+  H    CP+ R+      Q  + +AS     + PE
Sbjct: 630  ---------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQTAPE 671


>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score =  113 bits (282), Expect = 4e-22
 Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 19/325 (5%)
 Frame = -2

Query: 992  LQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWN- 816
            L++L++ P  FS T  NP +A +WL   E  L  +  +    V F T++ +GP+  WW+ 
Sbjct: 94   LEFLRVKPPTFSSTT-NPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPASIWWDN 152

Query: 815  -AVIKAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRY 639
              V +  G  +TW  F+  F    VP+ +  +K  EF SL +G  ++  Y  +F RL+RY
Sbjct: 153  YMVTRPTGAEVTWTEFRHSFNKAQVPEGIVGQKKREFRSLQQGTKTVIEYLHEFNRLARY 212

Query: 638  GTELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLV 459
              E + TD  K++KF+ GLD E+  QL     + YED   +E  +++ +  E++      
Sbjct: 213  APEDVRTDAEKQEKFMSGLDDELTNQLIS---RDYED---FEKLVDKAIRQEEQCNKMN- 265

Query: 458  T*VRERPPQFSARQDPAK--RQMMSFPG--QTFYIPPIRPWQPGSTSR------------ 327
               + +  QF   Q   +  R  M   G   T  I   RP+ PGS ++            
Sbjct: 266  --RKRKAAQFRTPQGKCQKPRYTMGRHGGPSTMIIRQHRPYHPGSFNKTHHSDSHNNSEQ 323

Query: 326  -PIAPRPPSVRPQGQTF*PQGRWMRFQQVRPATLTNSDSSFERCWECGKTDHLRRDCPQL 150
              + P P S++   Q+          Q   P          E C+ C K  H    CP+ 
Sbjct: 324  HSLNPTPSSLKIPAQS---------VQPALPEQPKRLGEKPELCFNCNKPGHTVGKCPKP 374

Query: 149  RKPPTGLSQQGMVYASESA*ISTPE 75
            R+      Q  + +AS     S PE
Sbjct: 375  RRAGPKFVQARVNHASAEEAQSAPE 399