BLASTX nr result
ID: Papaver30_contig00005330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00005330
(3606 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 990 0.0
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 988 0.0
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme... 977 0.0
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 967 0.0
emb|CDP05596.1| unnamed protein product [Coffea canephora] 959 0.0
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 959 0.0
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 959 0.0
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 959 0.0
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 958 0.0
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme... 949 0.0
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 944 0.0
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 944 0.0
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 944 0.0
ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme... 943 0.0
ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polyme... 939 0.0
ref|XP_008389159.1| PREDICTED: probable RNA-dependent RNA polyme... 939 0.0
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme... 939 0.0
ref|XP_008465250.1| PREDICTED: RNA-dependent RNA polymerase 1 [C... 936 0.0
ref|XP_010670368.1| PREDICTED: RNA-dependent RNA polymerase 1 [B... 935 0.0
ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polyme... 934 0.0
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962527|ref|XP_010275424.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962530|ref|XP_010275500.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962533|ref|XP_010275583.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962536|ref|XP_010275643.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962539|ref|XP_010275710.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
Length = 1136
Score = 990 bits (2559), Expect(2) = 0.0
Identities = 487/673 (72%), Positives = 565/673 (83%), Gaps = 6/673 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NSAWMFAS TAASIR WMGDF +IRNVAKYAARLGQSF SS ETL+VY +E E I D
Sbjct: 467 NSAWMFASSNGYTAASIRQWMGDFSKIRNVAKYAARLGQSFSSSRETLNVYEHETEIIDD 526
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCT-PSAFQIRYGGYKGVVAVDPKAVK 1883
+++E G Y FSDGIGKIS++FA +VA KCG K + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 527 IKVEWRGIEYIFSDGIGKISADFAKQVAKKCGFKGSFPSAFQIRYGGYKGVVAVDPTSTK 586
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR+SM K+ S+NTKLDVLSWSK+QPCFLNRQ+I+LLSTLGV D IFEKKQKEA+DQL
Sbjct: 587 KLSLRRSMSKYESRNTKLDVLSWSKYQPCFLNRQIITLLSTLGVRDSIFEKKQKEAMDQL 646
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILTD L+A EALEIMSP E TNILKEMLLCGY+P+ EPFLSMMLQTFRA+KLLELRT+
Sbjct: 647 DAILTDSLKAQEALEIMSPGENTNILKEMLLCGYEPNAEPFLSMMLQTFRASKLLELRTK 706
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVL-G 1346
TRIF+P GRS++GCLDET TL+YG+VFVQVS +G Q S + + N P ++ G
Sbjct: 707 TRIFVPNGRSLLGCLDETRTLKYGEVFVQVSSIGRRQFHESSLFVFSGNEPEQQKFIVEG 766
Query: 1345 KVVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVC 1166
K++VAKNPCLHPGD+R+L+AV+VPALHHMVDCVVFPQ+GKRPHPNECSGSDLDGDVYFVC
Sbjct: 767 KIIVAKNPCLHPGDVRLLQAVNVPALHHMVDCVVFPQEGKRPHPNECSGSDLDGDVYFVC 826
Query: 1165 WDQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKE 986
WD +LIPPRQ+QPM+Y P++ LDHDV IEE+EEYF NY++N+SLG+IAN HTAFADKE
Sbjct: 827 WDPDLIPPRQIQPMEYLPEPSVNLDHDVTIEEIEEYFTNYIVNESLGIIANAHTAFADKE 886
Query: 985 LLKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGK 806
KAES+ C++LAKLFSIAVDFPKTGVPAEIP HL VKEYPDFMEKLD+PTY S+RVIGK
Sbjct: 887 PKKAESDACLQLAKLFSIAVDFPKTGVPAEIPQHLYVKEYPDFMEKLDKPTYVSERVIGK 946
Query: 805 LFRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDY 626
LFR VKDIAP T I+SFT EVA++ YD DMEVDGFEDYL DAY++KGE+D KL NLMDY
Sbjct: 947 LFRAVKDIAPQTWSIRSFTQEVARRSYDPDMEVDGFEDYLSDAYYYKGEYDSKLGNLMDY 1006
Query: 625 YGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDD 446
YGIKTEAEIL G++MKLSKSF +RDAE+ISLAVR+L+KEAR WF++KS E DD
Sbjct: 1007 YGIKTEAEILSGNIMKLSKSFTKKRDAEAISLAVRSLRKEARAWFNEKS---GPGPEADD 1063
Query: 445 VYAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRK----HNW 278
VYAKASAWYHVTYHP Y+GCY++ + RDHFLSFPWCVYDKLIHIK+ + R+
Sbjct: 1064 VYAKASAWYHVTYHPDYWGCYNEGLKRDHFLSFPWCVYDKLIHIKREKASIRRIRIIDES 1123
Query: 277 SLEDQFMSSLRLS 239
SL QF SLRL+
Sbjct: 1124 SLGLQFRRSLRLN 1136
Score = 482 bits (1241), Expect(2) = 0.0
Identities = 257/442 (58%), Positives = 311/442 (70%), Gaps = 2/442 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P+ VTAE +K+ LE YTG GTVYAL+V KNKG AF +QFT+S +A+ ++ LVNR
Sbjct: 11 PANVTAEAVKELLERYTGDGTVYALKVRHHKNKGHARFAFVIVQFTTSGSADVITSLVNR 70
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RLY+G YLKV +RDI+ KPR+S+ L+ TLHFGCQVS + F L+K DV+V F
Sbjct: 71 --RLYYGTHYLKVRDVERDIVAKPRMSLLSLEHTTLHFGCQVSPEKFSVLWKGADVAVRF 128
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
FG R+L F LS + YKL LSYE+IW+IQLR P+ N +FL+IQM P+++
Sbjct: 129 EFGLRRLHFFLSQFP------IDYKLGLSYENIWQIQLRHPRGQNKKFLLIQMFGVPRIF 182
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ SL N D L YF DDQW R TDFT C IGQSSALCLE+PY LPN RE
Sbjct: 183 KKVKISLENMFEDPILNYFREP-DDQWDRTTDFTPLCCIGQSSALCLELPYSYVLPNIRE 241
Query: 2892 NFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTL 2713
F YY ED+G F ++ G+T SRS LVP+VGP G + Y+ILFKV SLVQNGCLSG TL
Sbjct: 242 YFAYYKEDEGPFVLESGATFSRSLSLVPIVGPSQGSDIPYEILFKVCSLVQNGCLSGPTL 301
Query: 2712 DANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISL 2533
DA FFR+VDP +++I ALEKL+HLK+CCYEPV WLT+QY Y PP+ SISL
Sbjct: 302 DAAFFRLVDPNFISIDYIENALEKLYHLKECCYEPVNWLTKQYRAYCTLKRPPKLPSISL 361
Query: 2532 SDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLS 2353
DGLVYVRR+QITP KVYF GPE+ VSNRVLR Y +IDNFIRISFVDED +KI STD+S
Sbjct: 362 DDGLVYVRRIQITPCKVYFCGPEVIVSNRVLREYSRYIDNFIRISFVDEDLDKIHSTDIS 421
Query: 2352 TRATVNDEKKQTLLYDRILSTL 2287
R + +EK T +YDRILSTL
Sbjct: 422 PRTSFANEKGHTEIYDRILSTL 443
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 988 bits (2555), Expect(2) = 0.0
Identities = 488/667 (73%), Positives = 561/667 (84%), Gaps = 1/667 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
+SAWMFAS+ LTAA IR+WMG+FREIRNVAKYAARLGQSF SS ETLSV+ +EIE I D
Sbjct: 470 SSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPD 529
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTP-SAFQIRYGGYKGVVAVDPKAVK 1883
V+IE T Y FSDGIGK+S+EFA KVA+KCGLK P SAFQIRYGGYKGVVA DP + K
Sbjct: 530 VKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSK 589
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR SM K+ S+ TKLDVL+WSK+QPCFLNRQ+ISLLSTLG+ D IFEKKQ+EAV QL
Sbjct: 590 KLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQL 649
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILTDPL+A EALE+MSP E TNILKE+L+CGYKPD EPFLSMMLQTFRA+KLLELRT+
Sbjct: 650 DAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTK 709
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP GRSMMGCLDET TL YGQVFVQ+S G+ QL G+S S+ +++ +V G
Sbjct: 710 TRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGES-SLFSSSRSRQRFIVQGL 768
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+RVL+AV+VPALHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 769 VVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCW 828
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D ELIPP+Q PMDY + +M LDHDVQIE+VEEYF NY++NDSLG+IAN HT FAD+E
Sbjct: 829 DDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREP 888
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA SE C++LA+ FSIAVDFPKTGVPAEIPPHL VKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 889 HKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKL 948
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR VKDIAPHTS I+ FT EVA++ YD DMEVDGFED++DDA +HKG +DYKL NLMDYY
Sbjct: 949 FRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYY 1008
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTEAEIL GS+MK+SKSF RRDAE+I +AVRAL+KEAR WF +K SGS +DD
Sbjct: 1009 GIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK----SGSDTEDDA 1064
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWYHVTYHP Y+GCY+ M+RDHFLSFPWCVYD+L+ IKK+ + +LE Q
Sbjct: 1065 YAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNAFPALEQQ 1124
Query: 262 FMSSLRL 242
F LR+
Sbjct: 1125 FRQGLRM 1131
Score = 444 bits (1142), Expect(2) = 0.0
Identities = 230/445 (51%), Positives = 313/445 (70%), Gaps = 5/445 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P+ VTAE +KDFLE+ TG GTVYAL++ PK KG R +A +QFT+ + A+ + L R
Sbjct: 11 PAGVTAEAVKDFLESKTGGGTVYALKLRTPK-KGVG-RLYAIVQFTTKEAADTIISLACR 68
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
++L++G SYL ++D +P+PR M ++ LHFGC++SN+ F L++ +V+V+F
Sbjct: 69 TEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNF 128
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RK+ F+LS+ +Y+LEL YE+IWEI+L P+ +++L+IQ+L AP+++
Sbjct: 129 GFGMRKINFLLSHLGE------EYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIF 182
Query: 3066 VEPLSS--LGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ + S L +F DDQWVR TDFT S IGQS+ LC+E+PY ELP+F+E
Sbjct: 183 QKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKE 242
Query: 2892 NFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTL 2713
NF YY E + F ++ GS SRS DLVP+VGPP G L Y+ILFK+N LVQNGC++G L
Sbjct: 243 NFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLL 302
Query: 2712 DANFFRMVDPCSHPVNHIMC---ALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTS 2542
D+NF+R+VDP PV+ I C AL+KL+HLK+CCYEP +WLT+QY +Y S + P S +
Sbjct: 303 DSNFYRLVDPYRAPVS-ISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPA 361
Query: 2541 ISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRST 2362
ISL DGLVYV RVQ+TP +VYF GPEINVSNRVLRH+ IDNF+RISF+DED +KI ST
Sbjct: 362 ISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHST 421
Query: 2361 DLSTRATVNDEKKQTLLYDRILSTL 2287
DLS R + + +T +Y RILSTL
Sbjct: 422 DLSPRGSSATDITRTRIYTRILSTL 446
>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 977 bits (2526), Expect(2) = 0.0
Identities = 478/668 (71%), Positives = 549/668 (82%), Gaps = 2/668 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NSAWMFAS+ LTAA IR WMGDF +IRNVAKYAARLGQSF SS ETL V +EIE I D
Sbjct: 455 NSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPD 514
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKC-TPSAFQIRYGGYKGVVAVDPKAVK 1883
+EI T Y FSDGIGKIS + AH+VA KCG K TPSAFQIRYGGYKGVVAVDP + +
Sbjct: 515 IEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSR 574
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSM K+ S NT LDVL+WSK+QP FLNRQ+I+LLSTLGV D++FEKKQ+ AVDQL
Sbjct: 575 KLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQL 634
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+IL DP+ A EALE+MSP E TN+LKEML+CGYKPD EPFLSMMLQTFRAAKLLELRT+
Sbjct: 635 DTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTK 694
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIF+P GRSMMGCLDET TLEYG+VFVQ+S G Q G S + D ++ GK
Sbjct: 695 TRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFRGSGSHHDNFILEGK 754
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
+VVAKNPCLHPGD+RVL AV+VP LHHMVDCVVFPQKGKRPHPNECSGSDLDGD+YFVCW
Sbjct: 755 IVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCW 814
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D++LIPP+Q+ PMDY +P +LDHDV IEEVEEYF NY++NDSLG+IAN HT FADKE
Sbjct: 815 DRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEY 874
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA + C ELAKLFSIAVDFPKTGVPAEIP +LRVKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 875 DKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKL 934
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKDIAPH +I+SFT +VA++ YD DMEV GFEDY+ DA+++K E+DYKL NLMDYY
Sbjct: 935 FREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYY 994
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTE+EIL GS+M++SKSF+ R+DAE+I LAV++L+KEARTWF+K S E DDV
Sbjct: 995 GIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGS--ETDSEADDV 1052
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIK-KNNSMRRKHNWSLED 266
YAKASAWYHVTYHP Y+GCY++ M RDHFLSFPWCVYDKLIH K K S R H SLE
Sbjct: 1053 YAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLSSLER 1112
Query: 265 QFMSSLRL 242
+ LRL
Sbjct: 1113 RLSQGLRL 1120
Score = 441 bits (1133), Expect(2) = 0.0
Identities = 232/440 (52%), Positives = 307/440 (69%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS V+A+ IK+FLE YTG+GT+ AL++ P++ A +QFTS + AE++ L +
Sbjct: 11 PSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFELAEFIITLCKK 68
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
++++G +YLK D DIIPKPR + + TLHFGCQ+S++ F L+K +VSV F
Sbjct: 69 --KVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RK F LS+ +YKLELSYE+IW+IQL+ P+ ++FL+IQ+L AP++Y
Sbjct: 127 GSGLRKFYFFLSHGSE------EYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQIY 180
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
+ + L YF DDQWVR DFT SC IGQS ALCLE+PYG +LPNFRENF
Sbjct: 181 EKDVPVLS------YYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRENF 234
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
YY E+ G F ++ GS+ S + LVP++GPP G L + ILFK+N+LVQNGCLSG TLD
Sbjct: 235 AYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDT 294
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
+FFR+VDP P++ I ALEKL+HLK+CCYEPV+WL+EQY Y + S +ISL
Sbjct: 295 SFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQYRTY-VKKPVAGSPAISLDT 353
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYVRRVQITP KVYF GPE+NVSNRVLR+Y + IDNF+R+SF+DE+ EKI ST +S R
Sbjct: 354 GLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPR 413
Query: 2346 ATVNDEKKQTLLYDRILSTL 2287
++ E ++T +Y RILS L
Sbjct: 414 --MSKEGRRTGVYRRILSIL 431
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 967 bits (2500), Expect(2) = 0.0
Identities = 481/671 (71%), Positives = 554/671 (82%), Gaps = 4/671 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR WMG F +IRNVA+YAARLGQSFGSSTETLSV S+EIE I D
Sbjct: 466 NSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPD 525
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E+ GT Y FSDGIGKIS+EFA KVA KCG K TPSAFQIRY GYKGVVAVDP + K
Sbjct: 526 IEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSK 585
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR+SM K+ S+NTKLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ FE+KQ+EAVDQL
Sbjct: 586 KLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQL 645
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D++LTDPLRA EALE+MSP E TNILKEMLLCGY+PD EPFLSMMLQTFRA+KLLELRT+
Sbjct: 646 DAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTK 705
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP GRSMMGCLDET TLE+GQVFV+ S L S M + G L+ G
Sbjct: 706 TRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSS-DMFSERGRGQCYLIKGS 764
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+R+L+AVDVPALHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 765 VVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 824
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D ELIP +Q+ PMDY P + LDHDV IEEVEEYF NY++NDSLGVIAN HTA ADKE
Sbjct: 825 DPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKES 884
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
LKA SE C+ELA+ FSIAVDFPKTGVPAEIP +LR +EYPDFMEK D+P+YES+ VIGKL
Sbjct: 885 LKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKL 944
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKDIAP TS I+SFT +VA++ YD DMEVDGFEDY+DDA+++K +DYKL NLM+YY
Sbjct: 945 FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTEAE+L GS MK+SKSF +RDAE+I +AVR+LKKEAR+WF++K S + DDV
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGS--GLDSQADDV 1062
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNW---SL 272
AKASAWYHVTYH Y+GCY++ M+RDHFLSFPWCVYDKLI IK+ NS R + + S+
Sbjct: 1063 DAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSV 1122
Query: 271 EDQFMSSLRLS 239
E QF L LS
Sbjct: 1123 ERQFSRGLHLS 1133
Score = 444 bits (1142), Expect(2) = 0.0
Identities = 230/442 (52%), Positives = 302/442 (68%), Gaps = 2/442 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS TA ++ FLE++TG GTV AL++ + G R +A +QFT+++ AE + L N
Sbjct: 11 PSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGA--RKYAIVQFTTTRAAEQIISLAN- 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RL++G+SYL P DRDIIP+PR + ++ TLHFG Q S + F ++ +VSV+F
Sbjct: 68 -PRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RKL F LS+ +YKL L +E+IW+I+L RP+ ++L+IQ+ AP++Y
Sbjct: 127 GLGMRKLHFFLSHNL------AEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ S N D L YF D+QWVR TDFT SC IG SS+LCLE+P +LPNF E
Sbjct: 181 ERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNE 240
Query: 2892 NFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTL 2713
NF YY E++G F ++ G T SR+ DLVP+VGP G L Y+ILF+VN LVQNGCL+G L
Sbjct: 241 NFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 2712 DANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISL 2533
D F+R+VDP PV I ALEKL+HLK+CCYEP KW EQY +Y S NPPRS +SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSL 360
Query: 2532 SDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLS 2353
GLVYV +VQITP KV+F GPE+NVSNRVLR Y + IDNF+R+SFVDE+ EKI STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVS 420
Query: 2352 TRATVNDEKKQTLLYDRILSTL 2287
R + +E ++T +Y+RILSTL
Sbjct: 421 PRTSSRNELRRTAIYNRILSTL 442
>emb|CDP05596.1| unnamed protein product [Coffea canephora]
Length = 1112
Score = 959 bits (2480), Expect(2) = 0.0
Identities = 469/669 (70%), Positives = 553/669 (82%), Gaps = 3/669 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR WMGDF IRNVAKYAARLGQSF SSTETL+V +EIE I D
Sbjct: 454 NSVWMFASRPGLTAADIRTWMGDFSRIRNVAKYAARLGQSFSSSTETLNVGRHEIEMISD 513
Query: 2059 VEIESN--GTI-YTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPKA 1889
+E+ GT Y FSDGIGK+S++FA +VA KCGL TPSAFQIRYGG+KGVVAVDP +
Sbjct: 514 IEVRGGYFGTSKYVFSDGIGKMSAQFARQVATKCGLSFTPSAFQIRYGGFKGVVAVDPTS 573
Query: 1888 VKKLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVD 1709
KKL LR+SM K+ S NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV D +FEKKQ+EAV
Sbjct: 574 SKKLSLRQSMMKYESDNTKLDVLAWSKYQPCFLNRQLITLLSTLGVKDVVFEKKQREAVA 633
Query: 1708 QLDSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELR 1529
QLD+ILTDPLRA EALE+M+P E TN+LKEML CGYKPD EPFLSMMLQTFRA+KLL+LR
Sbjct: 634 QLDTILTDPLRAREALELMAPGENTNVLKEMLKCGYKPDSEPFLSMMLQTFRASKLLDLR 693
Query: 1528 TRTRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVL 1349
T+TRIFIP GRSM+GCLDET TLEYGQVFVQ S G Q S S T++
Sbjct: 694 TKTRIFIPDGRSMIGCLDETRTLEYGQVFVQFSSAGCRQFYDDSISYYEHK-----TILK 748
Query: 1348 GKVVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFV 1169
G VVVAKNPCLHPGD+R+L+AVD+P LHHMVDCVVFPQKGKRPH NECSGSDLDGD+YFV
Sbjct: 749 GTVVVAKNPCLHPGDIRILKAVDLPTLHHMVDCVVFPQKGKRPHTNECSGSDLDGDIYFV 808
Query: 1168 CWDQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADK 989
CWD +LIPPRQ +PMDY +P M L+H+V IEEVEEYF NY++NDSLG+IAN HT FAD+
Sbjct: 809 CWDPDLIPPRQDEPMDYTPAPTMQLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADR 868
Query: 988 ELLKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIG 809
ELLKA S+ C+ELA+LFSIAVDFPKTGVPAEI HLRVKEYPDFMEK D+ TY+S+ VIG
Sbjct: 869 ELLKARSKPCLELARLFSIAVDFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQHVIG 928
Query: 808 KLFRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMD 629
KLFR+VK+IAPHTS I+SFT EVA+K YD DMEVDGFEDY+D+A+ +K E+DYKL NLMD
Sbjct: 929 KLFREVKEIAPHTSSIRSFTREVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLGNLMD 988
Query: 628 YYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDD 449
YYGIKTEAEIL G +MK+S+SF+ R+DAE++ +AVR+L+KEARTWF++ N G D
Sbjct: 989 YYGIKTEAEILSGGIMKMSRSFDRRKDAEAVGMAVRSLRKEARTWFNR----NGG--HSD 1042
Query: 448 DVYAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLE 269
D +AKASAWY+VTYHP+Y+GCY++ ++R H++SFPWC+YD+LI IKK + R + SLE
Sbjct: 1043 DAFAKASAWYYVTYHPRYWGCYNEGLNRAHYISFPWCIYDRLIQIKKARTRRAQQPSSLE 1102
Query: 268 DQFMSSLRL 242
QF LRL
Sbjct: 1103 VQFNHRLRL 1111
Score = 405 bits (1040), Expect(2) = 0.0
Identities = 220/440 (50%), Positives = 295/440 (67%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS V AE + FLE +TG+GTVYAL+ I ++KG N RA+A +QFT+ ++AEY+ L +
Sbjct: 11 PSVVPAETVTKFLECFTGQGTVYALE--IKQSKGGN-RAYAKVQFTNDRSAEYIMTLAKK 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RL +G+SYL+ + D D++P+ R +++ LHFGCQVS + F L +VSV F
Sbjct: 68 --RLNYGSSYLRAWEMDVDLVPRARSFEHNMEQIVLHFGCQVSKNRFSVLRNVPNVSVRF 125
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RK+ FIL ++ YKLELSYE+IW+I L R ++L +FL+IQ+ AP+V+
Sbjct: 126 GIGMRKMYFILRFRS------CDYKLELSYENIWQIVLHR-RSLAPKFLLIQLFGAPRVF 178
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
+ S YF T DDQWVR TDFT SC IGQSS +CLE+P G +LPN + F
Sbjct: 179 KKLEEST------FSYFKETPDDQWVRTTDFTSSC-IGQSSGICLELPRGIQLPNLGDYF 231
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
++ E F ++ GS S + L P++ PP G L Y ILFKV LVQ GCL G +LDA
Sbjct: 232 AWFKESDSQFFLETGSPYSYNLVLAPILQPPQGLYLPYGILFKVCCLVQTGCLPGPSLDA 291
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
NFFR+VDP + +I ALE L+ LK+CCYEPV+WL EQY +Y P+S +++L D
Sbjct: 292 NFFRLVDPQRIKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTLTLDD 351
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYVRRVQ+TP KVYF GPE+NVSNRVLR++ + +DNF+R+SF+DE+ K+ STDLS R
Sbjct: 352 GLVYVRRVQVTPCKVYFCGPEVNVSNRVLRNFSEDLDNFLRVSFIDEEWNKMFSTDLSPR 411
Query: 2346 ATVNDEKKQTLLYDRILSTL 2287
N E +T +Y+RILSTL
Sbjct: 412 IAAN-ENGRTEIYERILSTL 430
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 959 bits (2479), Expect(2) = 0.0
Identities = 476/670 (71%), Positives = 551/670 (82%), Gaps = 3/670 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR WMG F +IRNVA+YAARLGQSF SSTETLSV +EIE I D
Sbjct: 466 NSCWMFASRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIISD 525
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E+ GT Y FSDGIGKIS+EFA KVA KCG K TPSAFQIRY GYKGVVAVDP + K
Sbjct: 526 IEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTK 585
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR SM K+ S+NTKLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ FE+KQ+EAVDQL
Sbjct: 586 KLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQL 645
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILTDPLRA EAL +MSP E TNILKEMLLCGY+PD EPFLSMMLQTFRA+KLLELRT+
Sbjct: 646 DAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTK 705
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP GR MMGCLDET TLE+GQVFVQ S L S + + G L+ G
Sbjct: 706 TRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSS-DVFSERGRGQCYLIEGS 764
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+R+L+AVDVPALHHMVDCVVFPQKG RPHPN+CSGSDLDGD+YFVCW
Sbjct: 765 VVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGDIYFVCW 824
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D ELIP +Q+ PMDY P + LDHDV IEEVEEYF NY++NDSLG+IAN HTAFADKE
Sbjct: 825 DPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKES 884
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
LKA SE C+ELA+ FSIAVDFPKTGVPAEIP +LRV+EYPDFMEK D+P+YES+ VIGKL
Sbjct: 885 LKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKL 944
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKDIAP TS I+SFT +VA++ YD DMEVDGFEDY+DDA+++K +DYKL NLM+YY
Sbjct: 945 FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTEAE+L GS MK+SKSF +RDAE+I +AVR+L+KEAR+WF++K S + DDV
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGS--GLDSQADDV 1062
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHN--WSLE 269
AKASAWYHVTYH Y+GCY++ M+RDHFLSFPWC+YDKLI IKKN++ R+ S+E
Sbjct: 1063 DAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVE 1122
Query: 268 DQFMSSLRLS 239
QF L LS
Sbjct: 1123 RQFSRGLHLS 1132
Score = 451 bits (1160), Expect(2) = 0.0
Identities = 233/442 (52%), Positives = 305/442 (69%), Gaps = 2/442 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS TA ++ FLE+YTG GTV AL++ + +G R +A +QFT+++ E + L N
Sbjct: 11 PSSATAGAVQVFLESYTGGGTVEALKIRETRTRGA--RKYAIVQFTTTRATEQIISLAN- 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
QRL++G SYL P DRDIIP+PR S+ ++ TLHFG Q S + F ++ +VSV+F
Sbjct: 68 -QRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RKL F LS+ +YKL L +E+IW+I+L RP+ ++L+IQ+ AP++Y
Sbjct: 127 GLGMRKLHFFLSHNL------AEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ S N D L YF D+QWVR TDFT SCSIG SS+LCLE+P +LPNF E
Sbjct: 181 EREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNFNE 240
Query: 2892 NFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTL 2713
NF YY E++G F ++ GST SR+ DLVP+VGP G L Y+ILF+VN LVQNGCL+G L
Sbjct: 241 NFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 2712 DANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISL 2533
D F+R+VDP PV I ALEKL+HLK+CCYEP KW EQY +Y S NPPRS +SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVLSL 360
Query: 2532 SDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLS 2353
GLVYV +VQITP KV+F GPE+N+SNRVLR Y + IDNF+R+SFVDE+ EKI STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTDVS 420
Query: 2352 TRATVNDEKKQTLLYDRILSTL 2287
R + +E ++T +Y+RILSTL
Sbjct: 421 PRTSSRNELRRTAIYNRILSTL 442
>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1127
Score = 959 bits (2478), Expect(2) = 0.0
Identities = 474/666 (71%), Positives = 557/666 (83%), Gaps = 1/666 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR+WMG+FR+IRNVAKYAARLGQSFGSSTETLSV NEIE + D
Sbjct: 465 NSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVSRNEIEILPD 524
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
VE+E T Y FSDGIGKIS+EFA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 525 VEVERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSK 584
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR+SMCK+ S+NTKLDVL +SK+QPCFLNRQ+I+LLSTLGV+D+IFEKKQ+EAVDQL
Sbjct: 585 KLSLRESMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFEKKQREAVDQL 644
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILT+ LRA EAL++MSP ETTNIL EMLLCGY+PD EPFLSMMLQ FRA+KLL+LRT+
Sbjct: 645 DAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLSMMLQMFRASKLLDLRTK 704
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
+RIF+P GRSMMGCLDET LEYGQVFVQ S H Q+ S +M+ G + ++ G
Sbjct: 705 SRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSS-TMVGGIGSGNGFVIEGM 763
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
V+VAKNPCLHPGD+RVLRAV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 764 VIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 823
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIP +Q+ PMDY P++ LDHDV I+EV EYF NY++NDSLG+I+N HT FAD+E
Sbjct: 824 DPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFADREP 883
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA S+ C+ELA FSIAVDFPKTGVPAEI HLRVKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 884 EKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKL 943
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR V+DIAPHTS IKSFTLEVA++ YD DMEVDGFEDY+DDA+++K +DYKL N MDYY
Sbjct: 944 FRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYY 1003
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GI+TEAEILGGS+MK+SK+F +RDAE+I LAVR+L+KEAR+WF ++ S E+DDV
Sbjct: 1004 GIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGS--GLDSEEDDV 1061
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAW++VTYHP Y+G Y++ M+RDHFLSFPWCVYDKLI IK+ R +H SLE Q
Sbjct: 1062 YAKASAWHYVTYHPSYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR--RCQHLSSLERQ 1119
Query: 262 FMSSLR 245
F LR
Sbjct: 1120 FGLRLR 1125
Score = 434 bits (1117), Expect(2) = 0.0
Identities = 222/447 (49%), Positives = 309/447 (69%), Gaps = 7/447 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS+VT + +K FLE+++G+GTV+A+++ KN+G R +A +QF ++++AE + L N+
Sbjct: 11 PSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGR--RKYAIVQFQTARDAELIISLTNK 68
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RL +G SYLK P D DI+PKPR + + TLHFGCQ+S + F L+ +VSV+F
Sbjct: 69 --RLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGTNVSVNF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RKL F LS+ + + YKLELSYE++W+++L P+ + ++L+IQ+ AP+++
Sbjct: 127 GFGMRKLQFFLSHGQ------MGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPRIF 180
Query: 3066 VEPLSS-------LGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCEL 2908
+ +++ L N +D T D+QWVR DFT C IG SS LCLE P +
Sbjct: 181 EKEIATFNVFEIPLFNDLKD------TPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINV 234
Query: 2907 PNFRENFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCL 2728
P F+ENF YY E +G F ++ G+ SR+ DLVP+VGPP G L ++ILF+VN LVQNGCL
Sbjct: 235 PKFQENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCL 294
Query: 2727 SGQTLDANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRS 2548
G LD++F+ +VDP + ++ I AL+KLFHLK+CCY+P +WL EQY +Y S PRS
Sbjct: 295 PGSALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRS 354
Query: 2547 TSISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIR 2368
SISL GLVY+RRVQITP KVYF GPE+NVSNRV+RHY I+NF+R+SFVDE+ EKI
Sbjct: 355 PSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIY 414
Query: 2367 STDLSTRATVNDEKKQTLLYDRILSTL 2287
STDL RA+ + ++T +Y RILSTL
Sbjct: 415 STDLCPRASSGNGDRRTAIYKRILSTL 441
>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 959 bits (2478), Expect(2) = 0.0
Identities = 474/666 (71%), Positives = 557/666 (83%), Gaps = 1/666 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR+WMG+FR+IRNVAKYAARLGQSFGSSTETLSV NEIE + D
Sbjct: 482 NSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVSRNEIEILPD 541
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
VE+E T Y FSDGIGKIS+EFA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 542 VEVERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSK 601
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR+SMCK+ S+NTKLDVL +SK+QPCFLNRQ+I+LLSTLGV+D+IFEKKQ+EAVDQL
Sbjct: 602 KLSLRESMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFEKKQREAVDQL 661
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILT+ LRA EAL++MSP ETTNIL EMLLCGY+PD EPFLSMMLQ FRA+KLL+LRT+
Sbjct: 662 DAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLSMMLQMFRASKLLDLRTK 721
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
+RIF+P GRSMMGCLDET LEYGQVFVQ S H Q+ S +M+ G + ++ G
Sbjct: 722 SRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSS-TMVGGIGSGNGFVIEGM 780
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
V+VAKNPCLHPGD+RVLRAV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 781 VIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 840
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIP +Q+ PMDY P++ LDHDV I+EV EYF NY++NDSLG+I+N HT FAD+E
Sbjct: 841 DPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFADREP 900
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA S+ C+ELA FSIAVDFPKTGVPAEI HLRVKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 901 EKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKL 960
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR V+DIAPHTS IKSFTLEVA++ YD DMEVDGFEDY+DDA+++K +DYKL N MDYY
Sbjct: 961 FRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYY 1020
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GI+TEAEILGGS+MK+SK+F +RDAE+I LAVR+L+KEAR+WF ++ S E+DDV
Sbjct: 1021 GIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGS--GLDSEEDDV 1078
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAW++VTYHP Y+G Y++ M+RDHFLSFPWCVYDKLI IK+ R +H SLE Q
Sbjct: 1079 YAKASAWHYVTYHPSYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR--RCQHLSSLERQ 1136
Query: 262 FMSSLR 245
F LR
Sbjct: 1137 FGLRLR 1142
Score = 434 bits (1117), Expect(2) = 0.0
Identities = 222/447 (49%), Positives = 309/447 (69%), Gaps = 7/447 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS+VT + +K FLE+++G+GTV+A+++ KN+G R +A +QF ++++AE + L N+
Sbjct: 28 PSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGR--RKYAIVQFQTARDAELIISLTNK 85
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RL +G SYLK P D DI+PKPR + + TLHFGCQ+S + F L+ +VSV+F
Sbjct: 86 --RLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGTNVSVNF 143
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RKL F LS+ + + YKLELSYE++W+++L P+ + ++L+IQ+ AP+++
Sbjct: 144 GFGMRKLQFFLSHGQ------MGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPRIF 197
Query: 3066 VEPLSS-------LGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCEL 2908
+ +++ L N +D T D+QWVR DFT C IG SS LCLE P +
Sbjct: 198 EKEIATFNVFEIPLFNDLKD------TPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINV 251
Query: 2907 PNFRENFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCL 2728
P F+ENF YY E +G F ++ G+ SR+ DLVP+VGPP G L ++ILF+VN LVQNGCL
Sbjct: 252 PKFQENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCL 311
Query: 2727 SGQTLDANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRS 2548
G LD++F+ +VDP + ++ I AL+KLFHLK+CCY+P +WL EQY +Y S PRS
Sbjct: 312 PGSALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCHPRS 371
Query: 2547 TSISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIR 2368
SISL GLVY+RRVQITP KVYF GPE+NVSNRV+RHY I+NF+R+SFVDE+ EKI
Sbjct: 372 PSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYSKDINNFLRVSFVDEELEKIY 431
Query: 2367 STDLSTRATVNDEKKQTLLYDRILSTL 2287
STDL RA+ + ++T +Y RILSTL
Sbjct: 432 STDLCPRASSGNGDRRTAIYKRILSTL 458
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 958 bits (2476), Expect(2) = 0.0
Identities = 476/670 (71%), Positives = 550/670 (82%), Gaps = 3/670 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR WMG F +IRNVA+YAARLGQSF SSTETLSV +EIE I D
Sbjct: 466 NSCWMFASRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIISD 525
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E+ GT Y FSDGIGKIS+EFA KVA KCG K TPSAFQIRY GYKGVVAVDP + K
Sbjct: 526 IEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTK 585
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR SM K+ S+NTKLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ FE+KQ+EAVDQL
Sbjct: 586 KLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQL 645
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILTDPLRA EAL +MSP E TNILKEMLLCGY+PD EPFLSMMLQTFRA+KLLELRT+
Sbjct: 646 DAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTK 705
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP GR MMGCLDET TLE+GQVFVQ S L S + + G L+ G
Sbjct: 706 TRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSS-DVFSERGRGQCYLIEGS 764
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+R+L+AVDVPALHHMVDCVVFPQKG RPHP ECSGSDLDGD+YFVCW
Sbjct: 765 VVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPKECSGSDLDGDIYFVCW 824
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D ELIP +Q+ PMDY P + LDHDV IEEVEEYF NY++NDSLG+IAN HTAFADKE
Sbjct: 825 DPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKES 884
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
LKA SE C+ELA+ FSIAVDFPKTGVPAEIP +LRV+EYPDFMEK D+P+YES+ VIGKL
Sbjct: 885 LKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKL 944
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKDIAP TS I+SFT +VA++ YD DMEVDGFEDY+DDA+++K +DYKL NLM+YY
Sbjct: 945 FREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYY 1004
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTEAE+L GS MK+SKSF +RDAE+I +AVR+L+KEAR+WF++K S + DDV
Sbjct: 1005 GIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGS--GLDSQADDV 1062
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHN--WSLE 269
AKASAWYHVTYH Y+GCY++ M+RDHFLSFPWC+YDKLI IKKN++ R+ S+E
Sbjct: 1063 DAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVE 1122
Query: 268 DQFMSSLRLS 239
QF L LS
Sbjct: 1123 RQFSRGLHLS 1132
Score = 451 bits (1160), Expect(2) = 0.0
Identities = 233/442 (52%), Positives = 305/442 (69%), Gaps = 2/442 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS TA ++ FLE+YTG GTV AL++ + +G R +A +QFT+++ E + L N
Sbjct: 11 PSSATAGAVQVFLESYTGGGTVEALKIRETRTRGA--RKYAIVQFTTTRATEQIISLAN- 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
QRL++G SYL P DRDIIP+PR S+ ++ TLHFG Q S + F ++ +VSV+F
Sbjct: 68 -QRLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RKL F LS+ +YKL L +E+IW+I+L RP+ ++L+IQ+ AP++Y
Sbjct: 127 GLGMRKLHFFLSHNL------AEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ S N D L YF D+QWVR TDFT SCSIG SS+LCLE+P +LPNF E
Sbjct: 181 EREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNFNE 240
Query: 2892 NFHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTL 2713
NF YY E++G F ++ GST SR+ DLVP+VGP G L Y+ILF+VN LVQNGCL+G L
Sbjct: 241 NFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSML 300
Query: 2712 DANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISL 2533
D F+R+VDP PV I ALEKL+HLK+CCYEP KW EQY +Y S NPPRS +SL
Sbjct: 301 DDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVLSL 360
Query: 2532 SDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLS 2353
GLVYV +VQITP KV+F GPE+N+SNRVLR Y + IDNF+R+SFVDE+ EKI STD+S
Sbjct: 361 DAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTDVS 420
Query: 2352 TRATVNDEKKQTLLYDRILSTL 2287
R + +E ++T +Y+RILSTL
Sbjct: 421 PRTSSRNELRRTAIYNRILSTL 442
>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
gi|731369199|ref|XP_010650995.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1109
Score = 949 bits (2453), Expect(2) = 0.0
Identities = 465/657 (70%), Positives = 539/657 (82%), Gaps = 1/657 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NSAWMFAS+ LTAA IR MGDF +IRNVAKYAARLGQSF SS ETL V +EIE I D
Sbjct: 453 NSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPD 512
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E +GT Y FSDGIGKIS+E AH+VA KCG K TPSAFQIRYGGYKGVVAVDP + +
Sbjct: 513 IETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSR 572
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSM K+ S+NT LDVLSWSK++PCFLNRQ+I+LLSTLGV D++FEKKQ+EAVDQL
Sbjct: 573 KLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQL 632
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+IL DPLRA EALE+MSP E TNILKEML+CGYKPD EPFLSMMLQTFRAAKLLELRT+
Sbjct: 633 DTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTK 692
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIF+P GRSMMGCLDET TLEYG+VFVQ+S G Q G S + D ++ GK
Sbjct: 693 TRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGSHHDNFILEGK 752
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+R+L AVDVPALHHMVDCVVFPQKG RPHP+ECSGSDLDGD+YFVCW
Sbjct: 753 VVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCW 812
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIPPRQ+ PMDY +P +LDHDV IEEVEEYF NY+ ND LG+IAN HT FADKE
Sbjct: 813 DHDLIPPRQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEY 872
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA C ELAKLFSIA++FPKTGVPAEIP HL VKEYPDFMEK ++PTYES+ VIGKL
Sbjct: 873 DKALCPPCKELAKLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPTYESQSVIGKL 932
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKD+APH ++SFT +VA + YD DMEVDGFEDY+ DA+++K ++D+KL +LMD
Sbjct: 933 FREVKDVAPHNYDVRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCC 992
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GI+TE+EIL GS+MK+SKSF+ R+DAE+I+LAVR+L+KEARTWF+K S DDV
Sbjct: 993 GIRTESEILSGSIMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSGTYAGA--DDV 1050
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSL 272
YA ASAWYHVTYHP Y+GCY++ M DHFLSFPWCVYDKLI IK++ R + SL
Sbjct: 1051 YAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKRDKMSIRSLHLSL 1107
Score = 436 bits (1122), Expect(2) = 0.0
Identities = 236/440 (53%), Positives = 309/440 (70%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS V+A IK+FLE YTG+GT+ AL++ PK+ A +QFTS + AE L+++
Sbjct: 11 PSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVS--MTHAKVQFTSLRLAE---LIISL 65
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
++L++G +YLK D DIIPKPR + + TLHFG Q+SN+ F L+K +VSV F
Sbjct: 66 AKQLWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINVSVKF 125
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RK F LS+ +YKLELS E+IW+IQLR P+ N++FL+IQ+L AP++Y
Sbjct: 126 GFGLRKFYFFLSHGSE------EYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQIY 179
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
+ +S+L YF T DDQWVR DFT SCSIGQSSALCLE+P+G +LPNF ENF
Sbjct: 180 EKDVSALS-------YFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNFCENF 232
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
Y E+ F ++ G++ S + LVP+VGPP G L + ILFK+N+LVQNGCLSG TLD
Sbjct: 233 ARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDT 292
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
NFFR VDP ++ I ALEKL++L++CCYEPV+WL EQY Y +S S +ISL
Sbjct: 293 NFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQYRTY-ISKQVAGSPAISLDT 351
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYVRRVQITP KVYF GPE+NVSNRVLR+Y + IDNF+R+SF+DE+SEKI ST +S R
Sbjct: 352 GLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPR 411
Query: 2346 ATVNDEKKQTLLYDRILSTL 2287
+++E ++T +Y RILS L
Sbjct: 412 --MSNEGRRTGVYRRILSIL 429
>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1126
Score = 944 bits (2441), Expect(2) = 0.0
Identities = 467/661 (70%), Positives = 548/661 (82%), Gaps = 1/661 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR+WMG+FR+IRNVAKYAARLGQSFGSSTETLSV N+IE + D
Sbjct: 464 NSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVRRNQIEILPD 523
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E E T Y FSDGIGKIS+EFA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 524 IEAERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSK 583
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSMCK+ S+NTKLDVL +SK+QPCFLNRQ+I+LLSTLGV D+IFEKKQ+EAVDQL
Sbjct: 584 KLSLRKSMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFEKKQREAVDQL 643
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILT+ LRA EAL++MSP ETTNIL EMLLCGY+PD EPFL+MMLQ FRA+KLL++RT+
Sbjct: 644 DAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLAMMLQMFRASKLLDVRTK 703
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
+RIF+P GRSMMGCLDET LEYGQVFVQ S H Q+ S +M G + ++ G+
Sbjct: 704 SRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSS-TMFGGIGSGNRFVIEGQ 762
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
V+VAKNPCLHPGD+RVLRAV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 763 VIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 822
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIP Q+ PMDY P++ LDHDV I+EV EYF NY++NDSLG+I+N HT FAD+E
Sbjct: 823 DPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFADREP 882
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA S+ C+ELA FSIAVDFPKTGVPAEI HLRVKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 883 AKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKL 942
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR V+DIAPHTS IKSFTLEVA++ YD DMEVDGF+DY+DDA+ +K +DYKL N MDYY
Sbjct: 943 FRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSNYDYKLGNHMDYY 1002
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GI+TEAEILGGS+MK+SK+F +RDAE+I LAV +L KEAR+WF++ S E+DDV
Sbjct: 1003 GIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGS--GLDSEEDDV 1060
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWY+VTYHP Y+G Y++ M+RDHFLSFPWCVYDKLI IK+ R + SLE Q
Sbjct: 1061 YAKASAWYYVTYHPTYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR--RCQPLSSLERQ 1118
Query: 262 F 260
F
Sbjct: 1119 F 1119
Score = 410 bits (1055), Expect(2) = 0.0
Identities = 211/441 (47%), Positives = 297/441 (67%), Gaps = 1/441 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P VT + +K LE+++G GTV+A+++ KN G R +A +QF ++++AE L+++
Sbjct: 11 PPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQ--RKYAIVQFQTARDAE---LIISL 65
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
+R+ +G SYLK +DI+P PR + + TLHFGC++S + F L+ +VSV+F
Sbjct: 66 NKRIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGTNVSVNF 125
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RKL F LS+++ + YKL+LSYE++W+I+L P+ + ++L+IQ+ AP+++
Sbjct: 126 GFGLRKLQFFLSHEQ------MDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPRIF 179
Query: 3066 VEPLSSLGNPGRDL-QYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFREN 2890
+ ++S L YF T D+QWVR DFT C IG SS LCLE P +P F+EN
Sbjct: 180 EKEIASSNVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQEN 239
Query: 2889 FHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLD 2710
F YY E + F ++ G+ S + DLVP+VGPP G L ++ILF+VN LVQ+GCL G LD
Sbjct: 240 FSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGSALD 299
Query: 2709 ANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLS 2530
++F+++VDP ++ I ALEKLFHLK+CCYEP WL EQY +Y S PRS SISL
Sbjct: 300 SSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSISLD 359
Query: 2529 DGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLST 2350
GL YVRR QITP K YF GPE+NVSNRV+R Y I+NF+R+SFVDE+ KI STDLS
Sbjct: 360 TGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTDLSP 419
Query: 2349 RATVNDEKKQTLLYDRILSTL 2287
RA+ + ++T +Y+RILSTL
Sbjct: 420 RASSGNGDRRTAIYNRILSTL 440
>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1150
Score = 944 bits (2441), Expect(2) = 0.0
Identities = 467/661 (70%), Positives = 548/661 (82%), Gaps = 1/661 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR+WMG+FR+IRNVAKYAARLGQSFGSSTETLSV N+IE + D
Sbjct: 488 NSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSVRRNQIEILPD 547
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E E T Y FSDGIGKIS+EFA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 548 IEAERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKGVVAVDPTSSK 607
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSMCK+ S+NTKLDVL +SK+QPCFLNRQ+I+LLSTLGV D+IFEKKQ+EAVDQL
Sbjct: 608 KLSLRKSMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFEKKQREAVDQL 667
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D+ILT+ LRA EAL++MSP ETTNIL EMLLCGY+PD EPFL+MMLQ FRA+KLL++RT+
Sbjct: 668 DAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLAMMLQMFRASKLLDVRTK 727
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
+RIF+P GRSMMGCLDET LEYGQVFVQ S H Q+ S +M G + ++ G+
Sbjct: 728 SRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSS-TMFGGIGSGNRFVIEGQ 786
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
V+VAKNPCLHPGD+RVLRAV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 787 VIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCW 846
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIP Q+ PMDY P++ LDHDV I+EV EYF NY++NDSLG+I+N HT FAD+E
Sbjct: 847 DPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISNAHTVFADREP 906
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
KA S+ C+ELA FSIAVDFPKTGVPAEI HLRVKEYPDFMEK D+PTYES+ VIGKL
Sbjct: 907 AKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKL 966
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR V+DIAPHTS IKSFTLEVA++ YD DMEVDGF+DY+DDA+ +K +DYKL N MDYY
Sbjct: 967 FRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSNYDYKLGNHMDYY 1026
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GI+TEAEILGGS+MK+SK+F +RDAE+I LAV +L KEAR+WF++ S E+DDV
Sbjct: 1027 GIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGS--GLDSEEDDV 1084
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWY+VTYHP Y+G Y++ M+RDHFLSFPWCVYDKLI IK+ R + SLE Q
Sbjct: 1085 YAKASAWYYVTYHPTYWGRYNEGMNRDHFLSFPWCVYDKLIQIKRKR--RCQPLSSLERQ 1142
Query: 262 F 260
F
Sbjct: 1143 F 1143
Score = 410 bits (1055), Expect(2) = 0.0
Identities = 211/441 (47%), Positives = 297/441 (67%), Gaps = 1/441 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P VT + +K LE+++G GTV+A+++ KN G R +A +QF ++++AE L+++
Sbjct: 35 PPDVTVDEVKKCLESHSGDGTVFAMKIRETKNGGQ--RKYAIVQFQTARDAE---LIISL 89
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
+R+ +G SYLK +DI+P PR + + TLHFGC++S + F L+ +VSV+F
Sbjct: 90 NKRIRYGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGTNVSVNF 149
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
GFG RKL F LS+++ + YKL+LSYE++W+I+L P+ + ++L+IQ+ AP+++
Sbjct: 150 GFGLRKLQFFLSHEQ------MDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPRIF 203
Query: 3066 VEPLSSLGNPGRDL-QYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFREN 2890
+ ++S L YF T D+QWVR DFT C IG SS LCLE P +P F+EN
Sbjct: 204 EKEIASSNVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQEN 263
Query: 2889 FHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLD 2710
F YY E + F ++ G+ S + DLVP+VGPP G L ++ILF+VN LVQ+GCL G LD
Sbjct: 264 FSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGSALD 323
Query: 2709 ANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLS 2530
++F+++VDP ++ I ALEKLFHLK+CCYEP WL EQY +Y S PRS SISL
Sbjct: 324 SSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSISLD 383
Query: 2529 DGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLST 2350
GL YVRR QITP K YF GPE+NVSNRV+R Y I+NF+R+SFVDE+ KI STDLS
Sbjct: 384 TGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYSKDINNFLRVSFVDEELGKIHSTDLSP 443
Query: 2349 RATVNDEKKQTLLYDRILSTL 2287
RA+ + ++T +Y+RILSTL
Sbjct: 444 RASSGNGDRRTAIYNRILSTL 464
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|778697870|ref|XP_011654423.1| PREDICTED: RNA-dependent
RNA polymerase 1-like isoform X1 [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus] gi|948561973|gb|ALM88233.1|
RNA-dependent RNA polymerase 1a [Cucumis sativus]
Length = 1130
Score = 944 bits (2441), Expect(2) = 0.0
Identities = 459/651 (70%), Positives = 538/651 (82%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS + AA IR WMGDFR I+N AKYAARLGQSFGSSTE LSV SNE E I D
Sbjct: 465 NSLWMFASGPDIDAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPD 524
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPKAVKK 1880
+E++ Y FSDGIGKISS+FA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 525 IEVQQGEIKYVFSDGIGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIK 584
Query: 1879 LYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQLD 1700
L LRKSMCKF S NTKLDVL SK+QPCFLNRQ+I+L+STLGV D IFEKKQ EAV+QLD
Sbjct: 585 LSLRKSMCKFESDNTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLD 644
Query: 1699 SILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTRT 1520
+ILTDPL+A EALE+MSP E TNILKEML CGY+PD EP+LSMMLQTFRA+KLLELRT++
Sbjct: 645 AILTDPLKAQEALELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKS 704
Query: 1519 RIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGKV 1340
RIFIP GR+MMGCLDET TLEYGQVFVQ+S H L +SF+ N G ++ G V
Sbjct: 705 RIFIPNGRAMMGCLDETRTLEYGQVFVQISSGRHRNL-SESFAF-NRIGREHHLVIEGNV 762
Query: 1339 VVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCWD 1160
VAKNPCLHPGD+RVL+AV++P L+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD
Sbjct: 763 TVAKNPCLHPGDVRVLKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD 822
Query: 1159 QELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKELL 980
ELIP RQ+ PMDY +P LD DV E+++EYF NYM+NDSLG+IAN HTAFADKEL
Sbjct: 823 TELIPSRQIPPMDYTPAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELF 882
Query: 979 KAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKLF 800
KA S C+ELAKLFS+AVDFPKTGVPA IP HL VKE+PDFMEK DRP+YES +VIGKLF
Sbjct: 883 KARSSPCLELAKLFSVAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLF 942
Query: 799 RQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYYG 620
R VKDIAP SHI+SFT +VA++ YD DMEV+GFEDY++DA++HK +DYKL NL+DYYG
Sbjct: 943 RAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYG 1002
Query: 619 IKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDVY 440
IK+EAE+L GS+M++SKSF RRDAE+I+LAVR+L+KEARTWF+ + +S S DD++
Sbjct: 1003 IKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGADSNS---DDLF 1059
Query: 439 AKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRK 287
AKASAWY+VTYH Y+GCY++ M RDH+LSFPWCVYDKL+ IK+NN RR+
Sbjct: 1060 AKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCVYDKLMQIKENNLRRRE 1110
Score = 400 bits (1028), Expect(2) = 0.0
Identities = 224/444 (50%), Positives = 296/444 (66%), Gaps = 4/444 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS+VTA+ +K+FLE +TG GTVYA++V PK G R +A +QFTS+ AE + L N
Sbjct: 11 PSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGG--RLYAIVQFTSATQAELIISLAN- 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
QRL++G+SYLK + DI+PKPR M+ L+ L FGCQVS + F L++ V F
Sbjct: 68 -QRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVDLVTF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RK+ F L YK V+Y+LELSYE IW+IQL P++ + ++L+IQ+ AP++Y
Sbjct: 127 GIGMRKMNFHLKYKS------VEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180
Query: 3066 --VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
V P S L +F DDQWVR TDFT SCSIGQSS+LCL++P G +LP F++
Sbjct: 181 KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240
Query: 2892 NFHYYTEDKGWFTM-QPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQT 2716
NF YY E + F + + S DL P+V H L Y ILFK+N+LVQ GC+
Sbjct: 241 NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRS-HVLPYKILFKINALVQYGCIPWPL 299
Query: 2715 LDANFFRMVDPC-SHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSI 2539
LDA+F+R+V+ + + + ALEKLFHLK+C Y+P +LTEQY +YS +PP S I
Sbjct: 300 LDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYS--RHPPNSPVI 357
Query: 2538 SLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTD 2359
SL DGLVYVRRVQITP KV+F GPE+NVSNRVLRH+ +IDNF+R+SFVDE+ +K+RSTD
Sbjct: 358 SLDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTD 417
Query: 2358 LSTRATVNDEKKQTLLYDRILSTL 2287
L R + E +T +Y RILS L
Sbjct: 418 LLPRMSSKSEDGKTDIYRRILSVL 441
>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058682|ref|XP_011075688.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058684|ref|XP_011075689.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 943 bits (2437), Expect(2) = 0.0
Identities = 468/666 (70%), Positives = 540/666 (81%), Gaps = 1/666 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFA L A IR WMGDFR IRNVAKYAARLGQSFGSSTETLSV +EIERI D
Sbjct: 456 NSLWMFAPTNNLNAHYIRQWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGQHEIERIPD 515
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+E GT Y FSDGIGKIS+EFA +VA +CG+K TPSAFQIRYGGYKGVVAVDP +
Sbjct: 516 IEAVRGGTKYIFSDGIGKISAEFARRVAVRCGVKNSTPSAFQIRYGGYKGVVAVDPTSSV 575
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR SM K+ S+NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV D+ FE+KQ+EAV QL
Sbjct: 576 KLSLRSSMLKYQSENTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHAFERKQREAVAQL 635
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D IL DPLRA EAL++M+P E TNILKEML CGYKPD EPFLSMMLQTFRA+KLL+LR +
Sbjct: 636 DDILVDPLRAQEALDLMAPGENTNILKEMLKCGYKPDGEPFLSMMLQTFRASKLLDLRLK 695
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
RIF+P+GR MMGCLDET TLEYG+VFVQ S Q +S M N +V GK
Sbjct: 696 ARIFVPQGRQMMGCLDETGTLEYGEVFVQFSGALRRQFNEESI-MFNDYMSEYNYIVKGK 754
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+RVL+AVDV ALHHMVDCVVFP+KG RPHPNECSGSDLDGD+YFVCW
Sbjct: 755 VVVAKNPCLHPGDVRVLKAVDVEALHHMVDCVVFPKKGMRPHPNECSGSDLDGDIYFVCW 814
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIPPRQV PMDYD +P LDHDV IEEVEEYF NY++NDSLG+I+N HT FADKE
Sbjct: 815 DPDLIPPRQVSPMDYDPAPTTGLDHDVTIEEVEEYFTNYIVNDSLGIISNAHTVFADKEE 874
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
A SE C+ELA+LFSIAVDFPKTGVPAEIP HLRVKEYPDFM+K D+ YESKRVIGKL
Sbjct: 875 SMALSESCLELARLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMDKPDKTAYESKRVIGKL 934
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
+R+VKDIAPHT+ KSFT EVA++ YD DMEVDGF+DY+D+A+ +K E+DYKL NLM+YY
Sbjct: 935 YREVKDIAPHTTSSKSFTKEVARRSYDPDMEVDGFKDYIDEAFDYKTEYDYKLGNLMEYY 994
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
GIKTEAEIL G +MK SK+F+ R+DAE+I +AVR+L+ EAR+WF K S E DD
Sbjct: 995 GIKTEAEILSGGIMKTSKTFDRRKDAEAIGVAVRSLRNEARSWFKKGS-------ESDDP 1047
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWYHVTYHP ++G Y++ + RDH++SFPWCVYDKLI IK++NS R SLE Q
Sbjct: 1048 YAKASAWYHVTYHPDFWGSYNEGLKRDHYISFPWCVYDKLIKIKEDNSRRAPGISSLEWQ 1107
Query: 262 FMSSLR 245
+ LR
Sbjct: 1108 LGNRLR 1113
Score = 429 bits (1103), Expect(2) = 0.0
Identities = 221/440 (50%), Positives = 297/440 (67%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P + A+++K+FLE TG+GT+ AL+V P KGP RA+A +QFT S+ AE + L +
Sbjct: 11 PYLIAADVVKNFLEQQTGQGTIVALEVK-PSKKGP--RAYAKVQFTHSRYAEMIQNLAST 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RLY+G SYL+V+ D DI+ PR + ++ TL+FGCQ S + F L+K VSV F
Sbjct: 68 --RLYYGTSYLRVWESDSDIVHNPRTYVHEMEQVTLNFGCQTSREKFSVLWKVASVSVKF 125
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G +K+ F+L + V+YKL+LSYE+IW+I L P ++ L+IQ+ AP++Y
Sbjct: 126 GTGMKKMHFLLCHNS------VEYKLQLSYENIWQIVLYHPHGQTAKLLLIQLFGAPRIY 179
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
+ S+ YF T DDQW+R TDFT SC IGQ+S LCLE+PYG LPNF+++F
Sbjct: 180 KKVSESI------YSYFSETQDDQWIRTTDFTPSC-IGQASGLCLELPYGMRLPNFQDHF 232
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
YY++ + F ++ G+ S + DLVP++ PP G +L Y ILFKV SLVQ GCL G LDA
Sbjct: 233 VYYSKSENPFHLERGAPFSHNLDLVPILHPPRGFELPYRILFKVCSLVQTGCLPGPKLDA 292
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
FF++V+P ++ ALEKL++LK+CCY+P WL EQY +Y + P S ISL D
Sbjct: 293 RFFQLVNPQRINTKYVEHALEKLYYLKECCYDPTTWLMEQYEKYRTAKEQPTSPVISLGD 352
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYV RVQ+TP KVYF GPE+NVSNRVLRHY D+IDNF+R+SFVDE+ +K+ STDLS R
Sbjct: 353 GLVYVHRVQVTPTKVYFSGPEVNVSNRVLRHYSDYIDNFLRVSFVDEEWDKMYSTDLSPR 412
Query: 2346 ATVNDEKKQTLLYDRILSTL 2287
DE +T LY+RIL TL
Sbjct: 413 VASADENGKTKLYERILKTL 432
>ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
gi|657979585|ref|XP_008381761.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1114
Score = 939 bits (2428), Expect(2) = 0.0
Identities = 474/671 (70%), Positives = 553/671 (82%), Gaps = 4/671 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTA IR+WMGDF I+NVAKYAARLGQSFGSSTETL+V +EIE I D
Sbjct: 465 NSMWMFASRWGLTADDIREWMGDFCHIKNVAKYAARLGQSFGSSTETLTVAKHEIEVIPD 524
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+ + Y FSDGIGKIS++FA KVA KCG K TPSAFQIRYGGYKGVVA+DP +
Sbjct: 525 IVHDK----YVFSDGIGKISADFAKKVALKCGYKGFTPSAFQIRYGGYKGVVAIDPTSSM 580
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSM K+ S+NTKLDVL+ SK+QPCFLNRQ+I+LLSTL V D +F KKQ+ AV QL
Sbjct: 581 KLSLRKSMSKYESENTKLDVLACSKYQPCFLNRQLITLLSTLEVPDLVFMKKQRAAVQQL 640
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
++ILTDPL+A +AL++MSP ETTNILKE+L CGYKPD EPFLSMMLQTFRA+KLL+LR +
Sbjct: 641 NAILTDPLKAQDALDLMSPGETTNILKELLTCGYKPDVEPFLSMMLQTFRASKLLDLRLK 700
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP GR+MMGCLDET TLEYG+VFVQ+S N + + + + GK
Sbjct: 701 TRIFIPDGRAMMGCLDETGTLEYGEVFVQLSG--------------NRHPGSASNHIEGK 746
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+RVL+AV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 747 VVVAKNPCLHPGDVRVLKAVNVPELHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCW 806
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
DQELIP RQ+QPMDY +P+M LDHDV +EEVEEYF NYMINDSLG+IAN HT FADK+
Sbjct: 807 DQELIPRRQIQPMDYTPAPSMELDHDVTMEEVEEYFVNYMINDSLGIIANAHTVFADKDP 866
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
LKA SE C ELAKLFSIAVDFPKTGVPA IP HL VKE+PDFMEK D+PTY+S VIG L
Sbjct: 867 LKAMSEPCKELAKLFSIAVDFPKTGVPAVIPAHLYVKEFPDFMEKHDKPTYQSCNVIGAL 926
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
F++VKDIAPH S I+SFT +VAK+ YD DMEVDGFEDY++DA ++KG +DYKL NLMDYY
Sbjct: 927 FQEVKDIAPHDSSIRSFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMDYY 986
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKK-SSINSGSQEDDD 446
GIKTEAEIL GSVM++SKSF RRDA+SI++AVR+L+KEAR WF++K + ++SG+ DD
Sbjct: 987 GIKTEAEILSGSVMRMSKSFTKRRDADSINMAVRSLRKEARAWFNEKGTGLDSGA---DD 1043
Query: 445 VYAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNN-SMRRK-HNWSL 272
VYAKASAWYHVTYHP YFG Y++ ++RDHF+SFPWCVYDKL+ IKK+ SMRR H SL
Sbjct: 1044 VYAKASAWYHVTYHPDYFGTYNEGLNRDHFISFPWCVYDKLVVIKKDKASMRRSLHMSSL 1103
Query: 271 EDQFMSSLRLS 239
E QF S L LS
Sbjct: 1104 ERQFRSGLHLS 1114
Score = 348 bits (894), Expect(2) = 0.0
Identities = 200/445 (44%), Positives = 273/445 (61%), Gaps = 5/445 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS +AE + ++LE TGKG+VYA++ N + R +A IQF ++ +AE+++ L +
Sbjct: 11 PSGASAEAVFEWLERKTGKGSVYAMRYRPANN---SRRYYAIIQFETANDAEFINSLADT 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
L++ SYLK D DI+PKPR ++ L+ L+FGC+ + + + +VSVDF
Sbjct: 68 GN-LWYERSYLKSRKMDHDIVPKPRTALHSLQNLELYFGCKTGKEELSYFWCSDNVSVDF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G +KL +L Y E V+YKLELSYE+IW+ +L P+ ++ L+ Q+L AP+++
Sbjct: 127 GIRIQKLICLLKYDE------VEYKLELSYENIWQTELYSPRGHTAKKLLFQLLGAPRIF 180
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ S G D Y T DDQW+R TDFT SC+IGQSS LCLE+PYG +LP+F E
Sbjct: 181 EKEADSSGQAYEDPFQNYCRETPDDQWIRTTDFTPSCAIGQSSVLCLELPYGLQLPDFGE 240
Query: 2892 NFHYY---TEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSG 2722
NF Y D P S SDL +V PP + YDILFKVNSLVQ G L G
Sbjct: 241 NFPGYKGIVRDLVTELCPPFSC----SDLGAMVCPPECIGVPYDILFKVNSLVQQGWLPG 296
Query: 2721 QTLDANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTS 2542
L NFF +VD + I AL+KL++L+D CYEP WL EQY++Y P+S
Sbjct: 297 PKLGDNFFELVDARKRDLACIEYALDKLYNLRDSCYEPSMWLEEQYMKYRRLKKTPKSPV 356
Query: 2541 ISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRST 2362
ISL GLVYVRRVQIT ++++ GPE+N+SNRVLR+Y DNFIR+SFV E+ KI S
Sbjct: 357 ISLDSGLVYVRRVQITSCQIHYCGPEVNISNRVLRNYPMDTDNFIRVSFVGEELAKIYSA 416
Query: 2361 DLSTRATVNDEKKQTLLYDRILSTL 2287
DLS R + ++ ++T Y RILS L
Sbjct: 417 DLSPRKSTTNQDRKTKFYMRILSIL 441
>ref|XP_008389159.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1114
Score = 939 bits (2426), Expect(2) = 0.0
Identities = 468/668 (70%), Positives = 545/668 (81%), Gaps = 1/668 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTAA IR+WMGDFR I+NVAKYAARLGQSFGSSTETL+V +E+E I D
Sbjct: 467 NSMWMFASRXGLTAABIREWMGDFRRIKNVAKYAARLGQSFGSSTETLNVGKHEMEVIPD 526
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPKAVKK 1880
VE Y FSDGIGKIS++FA KVA+KCG TPSAFQIRYGGYKGVVAVDP + K
Sbjct: 527 VENNK----YVFSDGIGKISADFAKKVASKCGFNGTPSAFQIRYGGYKGVVAVDPTSSMK 582
Query: 1879 LYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQLD 1700
L LR+SM K+ S+NTKLDVL+ SK QPCFLNRQ+ISLLSTLGV D F KKQK AV QL+
Sbjct: 583 LSLRRSMSKYESENTKLDVLACSKIQPCFLNRQLISLLSTLGVPDPAFMKKQKAAVQQLN 642
Query: 1699 SILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTRT 1520
+ILTDPL+A EAL++MS ETTN LKE+L+CGYKPD EPF+SMMLQTFRA+KLLELRT+T
Sbjct: 643 AILTDPLKAQEALDLMSAGETTNCLKELLICGYKPDVEPFISMMLQTFRASKLLELRTKT 702
Query: 1519 RIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGKV 1340
RIFIP GR+MMGCLDET TLEYG+VFVQ S H + +++GKV
Sbjct: 703 RIFIPDGRAMMGCLDETRTLEYGEVFVQFSGNRHT-----------VSASNQRFIIVGKV 751
Query: 1339 VVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCWD 1160
VAKNPCLHPGD+RVL+AVDVP L+HMVDCVVFPQKG RPHPNECSGSDLDGD+Y+VCWD
Sbjct: 752 AVAKNPCLHPGDVRVLKAVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYYVCWD 811
Query: 1159 QELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKELL 980
+ELIP +Q++PMDY +P + LDHDV IEEVEEYF NYM+NDSLG+IAN HT FADK+ L
Sbjct: 812 EELIPRKQIEPMDYTPAPTIELDHDVTIEEVEEYFVNYMVNDSLGIIANAHTVFADKDPL 871
Query: 979 KAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKLF 800
KA S ECIELAKLFSIAVDFPKTGVPA IPP L KEYPDFMEKLD+PTY+S VIG LF
Sbjct: 872 KAMSXECIELAKLFSIAVDFPKTGVPAVIPPXLYAKEYPDFMEKLDKPTYQSSNVIGALF 931
Query: 799 RQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYYG 620
R+VKDIAPH S I SFT +VAK+ YD+DM VDG EDY++DA ++KG +DYKL NLM+YYG
Sbjct: 932 REVKDIAPHESSITSFTRQVAKQSYDSDMXVDGXEDYIEDAIYYKGNYDYKLGNLMEYYG 991
Query: 619 IKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKK-SSINSGSQEDDDV 443
IKTEAEIL GSVM++SKSF RRDAESI++AVR+L+KEAR WF++K + ++SG+ D V
Sbjct: 992 IKTEAEILSGSVMRMSKSFTKRRDAESINVAVRSLRKEARAWFNEKGTGLDSGA---DXV 1048
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWYHVTYHP YFG Y++ ++RDHF+SFPWCVYDKL+ IKK+ + R SLE Q
Sbjct: 1049 YAKASAWYHVTYHPDYFGTYNEGLNRDHFISFPWCVYDKLVLIKKDXASIRMS--SLESQ 1106
Query: 262 FMSSLRLS 239
F L LS
Sbjct: 1107 FWDGLHLS 1114
Score = 362 bits (929), Expect(2) = 0.0
Identities = 205/443 (46%), Positives = 283/443 (63%), Gaps = 4/443 (0%)
Frame = -1
Query: 3603 SYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNRP 3424
S VTAE + LE TGKG+VYA+++ K+ R +A +QF +++NA+ + + N
Sbjct: 12 SGVTAEAVVRLLEKETGKGSVYAVRLRKAKD---GRRYYATVQFDTTKNADLIHYMANA- 67
Query: 3423 QRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDFG 3244
+ LY+G SYL + D+DI+PKPRVS+ L FGC+++ + ++ + +VSVDFG
Sbjct: 68 RNLYYGASYLNSWKLDQDIVPKPRVSLHTFANIKLDFGCKIATNKLFSFWNMNNVSVDFG 127
Query: 3243 FGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVYV 3064
G RKL L Y ++Y +ELSYE+IW+I+L R + ++ L+IQM AP++
Sbjct: 128 IGLRKLVCRLKYDA------LEYMJELSYENIWQIELHRXRGXAAKHLLIQMYGAPRISK 181
Query: 3063 EPLSSLGNPGRDL--QYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFREN 2890
+ + S G DL YF + DDQWVR TDFT S +IGQS AL LE+P LP+FREN
Sbjct: 182 KVIRSSGQAYEDLGMTYFKDS-DDQWVRTTDFTPSRAIGQSFALSLELPXSLXLPDFREN 240
Query: 2889 FHYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLR--YDILFKVNSLVQNGCLSGQT 2716
F Y E +G ++ G S + L P+V PP G + YDILFKV+SL+Q G LSG T
Sbjct: 241 FPGYEEIEGNLVLEXGPPYSCNPSLGPMVCPPRGVBVYVPYDILFKVHSLLQLGYLSGPT 300
Query: 2715 LDANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSIS 2536
LD F++MVDP I ALEKL++LK+ CY+P +WL EQY +Y S P+S+ IS
Sbjct: 301 LDVIFYKMVDPXRFDRACIEYALEKLYNLKETCYKPSEWLNEQYRKYLTSKRRPQSSVIS 360
Query: 2535 LSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDL 2356
L GLVYVRRVQITP +V+ GPE+NVSNRVLR+Y IDNFIR+SFVDE+ +++ S+DL
Sbjct: 361 LDSGLVYVRRVQITPCRVFSSGPEVNVSNRVLRNYPXDIDNFIRVSFVDEEMDRVYSSDL 420
Query: 2355 STRATVNDEKKQTLLYDRILSTL 2287
R + E +T +Y RI+ L
Sbjct: 421 LPRTSAAYEDGKTDIYKRIIFIL 443
>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|848895047|ref|XP_012847563.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Erythranthe
guttatus] gi|604316686|gb|EYU28878.1| hypothetical
protein MIMGU_mgv1a000505mg [Erythranthe guttata]
Length = 1110
Score = 939 bits (2426), Expect(2) = 0.0
Identities = 461/667 (69%), Positives = 536/667 (80%), Gaps = 1/667 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFA L A IR+WMGDF IRNVAKYAARLGQSFGSSTETLSV EIE I+D
Sbjct: 456 NSLWMFAPTDGLNADGIREWMGDFSSIRNVAKYAARLGQSFGSSTETLSVSKREIEEIQD 515
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKC-TPSAFQIRYGGYKGVVAVDPKAVK 1883
V+ NGT YTFSDGIGKIS +FA +VA KCG++ TPSAFQIRYGGYKGVVAVDP + K
Sbjct: 516 VK---NGTEYTFSDGIGKISEDFARQVAAKCGVRSSTPSAFQIRYGGYKGVVAVDPSSKK 572
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LR SM K+ S NTKLDVL+WSK+QPCFLNRQ+I+LLSTLGV D++FEK+Q+EAV QL
Sbjct: 573 KLSLRPSMLKYQSDNTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHVFEKRQREAVAQL 632
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
D +L DP+RA EAL++MSP E T+ILKEML CGY+PD EPFLSMMLQTFRA+KLL+LR +
Sbjct: 633 DDVLIDPMRAQEALDLMSPGENTHILKEMLKCGYEPDGEPFLSMMLQTFRASKLLDLRVK 692
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
R+FIPK R MMGCLDET L+YGQVFV+ S L S+ AN D V GK
Sbjct: 693 ARVFIPKARQMMGCLDETGILKYGQVFVRYSGAVKRGLFDDSYDNSTANERFDP--VRGK 750
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+RVL AVDVP L HMVDCVVFP+ GKRPHPNECSGSDLDGD+YFVCW
Sbjct: 751 VVVAKNPCLHPGDVRVLTAVDVPELRHMVDCVVFPKNGKRPHPNECSGSDLDGDIYFVCW 810
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
D +LIP +QV+PMDY+ +P LDHDV IEEVE+YF NY++NDSLG+IAN HT FADKE
Sbjct: 811 DSDLIPTKQVEPMDYNPAPTTRLDHDVTIEEVEDYFTNYIVNDSLGIIANAHTVFADKEP 870
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
L A SE C+ELA+LFSIAVDF KTG+PAEIPPHLRVKEYPDFMEK D+ Y S RVIGKL
Sbjct: 871 LMALSEPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEYPDFMEKPDKINYASSRVIGKL 930
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
FR+VKDIAP TS +SFT EVA++ YD DMEVDGFED++D+A+ HK E+DYKL NLM+YY
Sbjct: 931 FREVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHKTEYDYKLGNLMEYY 990
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDV 443
G+KTEAE+L G +MK+SK+F+ R+DAE+I AVR+L+ EAR+WF K E DDV
Sbjct: 991 GVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVRSLRNEARSWFKK-------GTEADDV 1043
Query: 442 YAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRKHNWSLEDQ 263
YAKASAWY+VTYHP YFGCY++ M RDH+LSFPWCVYDKL+ IKK+NS R SL Q
Sbjct: 1044 YAKASAWYYVTYHPDYFGCYNEGMKRDHYLSFPWCVYDKLVKIKKDNSRRASQMASLRRQ 1103
Query: 262 FMSSLRL 242
F +R+
Sbjct: 1104 FNDRVRI 1110
Score = 427 bits (1098), Expect(2) = 0.0
Identities = 224/440 (50%), Positives = 292/440 (66%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
P V AEL+K FLENYTG+GTV AL+V K RA+A +QFT+ + AE + L
Sbjct: 11 PYLVAAELVKKFLENYTGEGTVIALEVKTAK---VGRRAYARVQFTNIRCAETIIDLAKN 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
RLY+G SYLK + D DI+ PR ++ TL+FGCQ+S F L+K V+V F
Sbjct: 68 --RLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGESVTVKF 125
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G +K+ F L + V+YK++LSYE+IW+I L +S+ L+IQ+ AP++Y
Sbjct: 126 GTGMKKMHFFLRHNS------VEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRIY 179
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
+ S+ YFM T DDQWVR TDFT+S IGQSS+LCL++PYG LPNFR+NF
Sbjct: 180 KKLSGSV------YSYFMVTQDDQWVRTTDFTQSL-IGQSSSLCLQLPYGMRLPNFRDNF 232
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
YY E + F ++ G S +SDLVP+V PP +L Y +LFKV SLVQ GCL G LD
Sbjct: 233 LYYKESETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDR 292
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
+FF +V+P H + +I ALEKL++LK+CCY P WL EQY Y S P+S +I L D
Sbjct: 293 SFFDLVNPAKHDIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDD 352
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYV RVQ+TP +VYF GPE+NVSNRVLRHY D+IDNF+R+SFVDE+ +K+ STDLS R
Sbjct: 353 GLVYVHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSPR 412
Query: 2346 ATVNDEKKQTLLYDRILSTL 2287
DE K+T LY+R++S L
Sbjct: 413 VAAGDENKRTKLYERVISIL 432
>ref|XP_008465250.1| PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo]
gi|659130596|ref|XP_008465251.1| PREDICTED: RNA-dependent
RNA polymerase 1 [Cucumis melo]
gi|659130598|ref|XP_008465252.1| PREDICTED: RNA-dependent
RNA polymerase 1 [Cucumis melo]
gi|659130600|ref|XP_008465253.1| PREDICTED: RNA-dependent
RNA polymerase 1 [Cucumis melo]
gi|659130602|ref|XP_008465254.1| PREDICTED: RNA-dependent
RNA polymerase 1 [Cucumis melo]
Length = 1129
Score = 936 bits (2419), Expect(2) = 0.0
Identities = 458/651 (70%), Positives = 532/651 (81%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS + AA IR WMGDFR I+N AKYAARLGQSFGSSTE LSV SNE E I D
Sbjct: 465 NSLWMFASGPDIDAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPD 524
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPKAVKK 1880
+E++ Y FSDGIGKISS+FA +VA KCG + PSAFQIRYGGYKGVVAVDP + K
Sbjct: 525 IEVQHGEVKYVFSDGIGKISSKFAKEVATKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIK 584
Query: 1879 LYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQLD 1700
L LRKSMCKF S N KLDVL SK+QPCFLNRQ+I+LLSTLGV D IFEKKQ EAV+QLD
Sbjct: 585 LSLRKSMCKFESDNIKLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLD 644
Query: 1699 SILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTRT 1520
+ILTDPL+A EALE+MSP E TNILKEML CGYKPD EP+LSMMLQTFRA+KLLELRT++
Sbjct: 645 AILTDPLKAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKS 704
Query: 1519 RIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGKV 1340
RIFIP GR+MMGCLDET TLEYGQVFVQ+S H L S S +G ++ GKV
Sbjct: 705 RIFIPNGRAMMGCLDETMTLEYGQVFVQISGGRHRNL---SESFAFNSGQEHCLVIEGKV 761
Query: 1339 VVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCWD 1160
VAKNPCLHPGD+RVL+AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD
Sbjct: 762 TVAKNPCLHPGDVRVLKAVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD 821
Query: 1159 QELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKELL 980
ELIPPRQ+ PMDY + + LD DV E+++EYF NYM+NDSLG+IAN HTAFADKE
Sbjct: 822 TELIPPRQITPMDYTPALPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPF 881
Query: 979 KAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKLF 800
KA S C+ELAK FSIAVDFPKTGVPA IP HL VKE+PDFMEK DRP+YESK VIGKLF
Sbjct: 882 KARSSPCVELAKQFSIAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLF 941
Query: 799 RQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYYG 620
R VKDIAP SHI+ FT +VA++ YD DMEV+GFEDY +DA++HK +D KL NL+DYYG
Sbjct: 942 RAVKDIAPTLSHIQPFTRDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYG 1001
Query: 619 IKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDVY 440
IK+EAEIL GS+M++SKSF RRDAE+I+LAVR+L+KEARTWF+ + +S S DD++
Sbjct: 1002 IKSEAEILSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGADSNS---DDLF 1058
Query: 439 AKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNNSMRRK 287
AKASAWY+VTYH Y+GCY++ M RDH+LSFPWC+YDKL+ IK+NN +R+
Sbjct: 1059 AKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCIYDKLMQIKENNLRKRE 1109
Score = 404 bits (1039), Expect(2) = 0.0
Identities = 224/446 (50%), Positives = 300/446 (67%), Gaps = 6/446 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS+VTA+ +K+FLE +TG GTVYA++V PK G R +A +QFTS+ AE + L N
Sbjct: 11 PSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGG--RLYAIVQFTSATQAELIVSLAN- 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
QRL++G+SYLK + DI+PKP+ M+ LK L FGCQVS++ F L++ V F
Sbjct: 68 -QRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEGNVDLVTF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G RK+ F L Y V+Y+LELSYE+IW+IQL P+ + ++L+IQ+ AP++Y
Sbjct: 127 GIGMRKMNFHLKYNS------VEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180
Query: 3066 VEPLSSLG----NPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNF 2899
+ S G NP L +FM DDQWVR TDFT SCSIGQSS+LCL++P G ELP F
Sbjct: 181 KKVAPSSGQIFDNP--ILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTF 238
Query: 2898 RENFHYYTEDKGWFTM-QPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSG 2722
++NF YY E + F + ++ S DL P+V H L Y+I+FK+N+LVQ+GC+
Sbjct: 239 KQNFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRP-HVLPYEIIFKINALVQHGCIPW 297
Query: 2721 QTLDANFFRMVDPC-SHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRST 2545
LD +F+R+V+ + + + ALEKLFHLK+C Y+P +LTEQ+ YS +PP S
Sbjct: 298 SLLDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYS--RHPPNSP 355
Query: 2544 SISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRS 2365
ISL DGLVYVRRVQITP KVYF GPE+NVSNRVLRH+ +IDNF+R+SFVDE+ +K+RS
Sbjct: 356 VISLDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRS 415
Query: 2364 TDLSTRATVNDEKKQTLLYDRILSTL 2287
TDL R + E +T +Y RILS L
Sbjct: 416 TDLLPRMSSKSEDSKTDIYRRILSVL 441
>ref|XP_010670368.1| PREDICTED: RNA-dependent RNA polymerase 1 [Beta vulgaris subsp.
vulgaris] gi|870866168|gb|KMT17177.1| hypothetical
protein BVRB_2g040860 [Beta vulgaris subsp. vulgaris]
Length = 1132
Score = 935 bits (2416), Expect(2) = 0.0
Identities = 453/646 (70%), Positives = 539/646 (83%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NSAWMFAS+ L+AA IR+WMGDFREIRNVAKYAARLGQSF SSTETL+V EIE I D
Sbjct: 468 NSAWMFASRPGLSAADIRNWMGDFREIRNVAKYAARLGQSFSSSTETLTVAREEIEMIPD 527
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLKCTPSAFQIRYGGYKGVVAVDPKAVKK 1880
V++ + FSDGIGKIS++FA KVA KCG TPSAFQIRYGG+KGVVAVDP + KK
Sbjct: 528 VKVTVGRNTHIFSDGIGKISADFACKVAKKCGYNSTPSAFQIRYGGFKGVVAVDPMSCKK 587
Query: 1879 LYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQLD 1700
L LR SMCK+ S N KLDVL++SK+QPC+LNRQ+I+LLSTLGV D +FEKKQKEA++QLD
Sbjct: 588 LSLRNSMCKYQSDNAKLDVLAYSKYQPCYLNRQLITLLSTLGVQDRVFEKKQKEALNQLD 647
Query: 1699 SILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTRT 1520
+IL DPL+A EALE+M P E T+ILKEML CGYKPD EPFLSMMLQTFRAAKL EL T++
Sbjct: 648 AILRDPLKAQEALELMCPGEVTSILKEMLKCGYKPDAEPFLSMMLQTFRAAKLQELLTKS 707
Query: 1519 RIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGKV 1340
RIF+P+GR+MMGCLDET TLEYGQVFVQVS + + + + + V GKV
Sbjct: 708 RIFVPRGRAMMGCLDETKTLEYGQVFVQVSGARFRNVGNELLTCTGYDFEPNNYAVKGKV 767
Query: 1339 VVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCWD 1160
VVAKNPCLHPGD+RVL AVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGD+YFVCWD
Sbjct: 768 VVAKNPCLHPGDVRVLMAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD 827
Query: 1159 QELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKELL 980
EL+PPRQ +PMDY A + +LDH+V +EE+ +YFANY+INDSLG+IAN HTAFAD+E L
Sbjct: 828 HELVPPRQEEPMDYVAPESTVLDHEVTMEEILDYFANYIINDSLGIIANAHTAFADREPL 887
Query: 979 KAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKLF 800
KA S+ CI+LA+LFSIAVDFPKTGVPA PP L VKEYPDFM+K D+PTYES+ VIGKLF
Sbjct: 888 KAMSDPCIQLAQLFSIAVDFPKTGVPAVTPPALYVKEYPDFMDKPDKPTYESQNVIGKLF 947
Query: 799 RQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYYG 620
R+VK+ +P ++ I+SFT E+A+ YD DME DGFED+LDDA ++K ++DYKL NLMDYYG
Sbjct: 948 REVKERSPSSTSIRSFTREIARCSYDPDMEYDGFEDHLDDAEYYKSQYDYKLGNLMDYYG 1007
Query: 619 IKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSSINSGSQEDDDVY 440
I +EAEIL G++M++SKSF+ R+DAE+I++AV++L+KEARTWF+KK N DDDVY
Sbjct: 1008 ITSEAEILSGNIMRMSKSFDKRKDAEAITMAVKSLRKEARTWFNKKG--NDPDSGDDDVY 1065
Query: 439 AKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNN 302
AKASAWY+VTYHP YFG Y++ M+RDH LSFPWCVYD+LI IKKNN
Sbjct: 1066 AKASAWYYVTYHPDYFGMYNEGMNRDHLLSFPWCVYDRLITIKKNN 1111
Score = 412 bits (1060), Expect(2) = 0.0
Identities = 216/441 (48%), Positives = 294/441 (66%), Gaps = 1/441 (0%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS V+AE +K +LE+ TG+GT+YAL++ K+ G R +A +QFTS + AE + L
Sbjct: 13 PSTVSAEAVKTYLEDKTGEGTIYALKIRQFKSGGT--RCYAVVQFTSVRMAELILSLAEP 70
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
P+++++ +++LK D+DI+PKPR + TLH GCQ SND F + R+VS+ F
Sbjct: 71 PKKIWYRSNFLKAREMDKDIVPKPRTYQHRMDNITLHVGCQTSNDKFLAFWSGRNVSLSF 130
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G G R+ F LSY E +YKL+LSYESIW+I+LRRP+ + ++L+IQ+ AP+++
Sbjct: 131 GSGLRRFYFYLSYDEK------EYKLQLSYESIWQIELRRPRANHVKYLLIQLFGAPRIF 184
Query: 3066 VEPLSSLGNPGRDLQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRENF 2887
E + + + YF DDQW R TDFT S +GQSS LCLE+PY CELP+FR F
Sbjct: 185 -EKVERVSGLLFENNYFKEEQDDQWFRTTDFTPSSCVGQSSVLCLELPYNCELPDFRATF 243
Query: 2886 HYYTEDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSGQTLDA 2707
Y+ ED G FT+ G+T S + +LVP+V PP G +L + ILFKVN LVQ GCL G LD
Sbjct: 244 PYFKEDDGQFTLVSGNTFSCNMELVPIVAPPRGVELPFYILFKVNYLVQFGCLPGPNLDH 303
Query: 2706 NFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTSISLSD 2527
+F++M+DP + ALEKL++LK+CCY+P WL +QY +Y S P +ISL
Sbjct: 304 SFYQMIDPRKIDKACVEYALEKLYYLKECCYDPFGWLKQQYTKYLTSKRIPEKPTISLDV 363
Query: 2526 GLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRSTDLSTR 2347
GLVYVRRVQ+TP +VYF GPE+NVSNRVLR+Y +DNF+RISFVDED EK+ STDLS R
Sbjct: 364 GLVYVRRVQVTPCRVYFCGPEVNVSNRVLRNYPYDVDNFLRISFVDEDLEKLYSTDLSPR 423
Query: 2346 -ATVNDEKKQTLLYDRILSTL 2287
++ +T + RI STL
Sbjct: 424 FSSEPGAGMRTNIDRRIRSTL 444
>ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Pyrus x
bretschneideri] gi|694320773|ref|XP_009351562.1|
PREDICTED: probable RNA-dependent RNA polymerase 1 [Pyrus
x bretschneideri]
Length = 1116
Score = 934 bits (2414), Expect(2) = 0.0
Identities = 471/671 (70%), Positives = 547/671 (81%), Gaps = 4/671 (0%)
Frame = -3
Query: 2239 NSAWMFASKGPLTAASIRDWMGDFREIRNVAKYAARLGQSFGSSTETLSVYSNEIERIRD 2060
NS WMFAS+ LTA IR+WMGDF I+NVAKYAARLGQSFGSSTETL+V +EIE I D
Sbjct: 465 NSMWMFASRWGLTADDIREWMGDFCHIKNVAKYAARLGQSFGSSTETLTVARHEIEVIPD 524
Query: 2059 VEIESNGTIYTFSDGIGKISSEFAHKVANKCGLK-CTPSAFQIRYGGYKGVVAVDPKAVK 1883
+ Y FSDGIGKIS++FA KVA KCG K TPSAFQIRYGGYKGVVA+DP +
Sbjct: 525 IVHNK----YVFSDGIGKISADFAKKVALKCGYKGFTPSAFQIRYGGYKGVVAIDPTSSM 580
Query: 1882 KLYLRKSMCKFTSQNTKLDVLSWSKFQPCFLNRQVISLLSTLGVSDYIFEKKQKEAVDQL 1703
KL LRKSM K+ S+N KLDVL+ SK+QPCFLNRQ+I+LLSTL V D +F KKQ+ AV QL
Sbjct: 581 KLSLRKSMSKYESENAKLDVLACSKYQPCFLNRQLITLLSTLEVPDLVFMKKQRAAVQQL 640
Query: 1702 DSILTDPLRAYEALEIMSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLLELRTR 1523
++ILTDPL+A EAL++MSP ETTNILKE+L CGYKPD EPFLSMMLQTFRA+KLL+LR +
Sbjct: 641 NAILTDPLKAQEALDLMSPGETTNILKELLTCGYKPDVEPFLSMMLQTFRASKLLDLRLK 700
Query: 1522 TRIFIPKGRSMMGCLDETATLEYGQVFVQVSRLGHNQLCGKSFSMLNANGPADTTLVLGK 1343
TRIFIP G++MMGCLDET TLEYG+VFVQ S H + + GK
Sbjct: 701 TRIFIPDGQAMMGCLDETGTLEYGEVFVQFSGNRH------------PGSAPNQQFIEGK 748
Query: 1342 VVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVCW 1163
VVVAKNPCLHPGD+RVL AV+VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCW
Sbjct: 749 VVVAKNPCLHPGDVRVLEAVNVPELHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCW 808
Query: 1162 DQELIPPRQVQPMDYDASPAMLLDHDVQIEEVEEYFANYMINDSLGVIANTHTAFADKEL 983
DQELIP RQ+QPMDY +P++ LDHDV +EEVEEYF NYM+NDSLG+IAN HT FADK+
Sbjct: 809 DQELIPRRQIQPMDYTPAPSIELDHDVTMEEVEEYFVNYMVNDSLGIIANAHTVFADKDT 868
Query: 982 LKAESEECIELAKLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMEKLDRPTYESKRVIGKL 803
LKA SE CIELAKLFSIAVDFPKTGVPA IP HL VKE+PDFMEK D+PTY+S VIG L
Sbjct: 869 LKAMSEPCIELAKLFSIAVDFPKTGVPAVIPAHLYVKEFPDFMEKHDKPTYQSCNVIGAL 928
Query: 802 FRQVKDIAPHTSHIKSFTLEVAKKLYDTDMEVDGFEDYLDDAYFHKGEFDYKLANLMDYY 623
F++VKDIA H S I+SFT +VAK+ YD DMEVDGFEDY++DA ++KG +DYKL NLMDYY
Sbjct: 929 FQEVKDIASHDSSIRSFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMDYY 988
Query: 622 GIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKK-SSINSGSQEDDD 446
GIKTEAEILGGSVM++SKSF RRDA+SI++AVR+L+KEAR WF++K + ++SG+ DD
Sbjct: 989 GIKTEAEILGGSVMRMSKSFTKRRDADSINMAVRSLRKEARAWFNEKGTGLDSGA---DD 1045
Query: 445 VYAKASAWYHVTYHPKYFGCYHQEMSRDHFLSFPWCVYDKLIHIKKNN-SMRRK-HNWSL 272
VYAKASAWYHVTYHP YFG Y++ ++RDHF+SFPWCVYDKL+ IKK+ SMRR H L
Sbjct: 1046 VYAKASAWYHVTYHPDYFGTYNEGLNRDHFISFPWCVYDKLVLIKKDKASMRRSLHMSPL 1105
Query: 271 EDQFMSSLRLS 239
E QF S L LS
Sbjct: 1106 ERQFRSGLHLS 1116
Score = 360 bits (925), Expect(2) = 0.0
Identities = 206/445 (46%), Positives = 277/445 (62%), Gaps = 5/445 (1%)
Frame = -1
Query: 3606 PSYVTAELIKDFLENYTGKGTVYALQVTIPKNKGPNPRAFADIQFTSSQNAEYMSLLVNR 3427
PS +AE + ++LE TGKG+VYA++ KN + R +A IQF ++ +AE+++ L N
Sbjct: 11 PSGASAEAVFEWLERKTGKGSVYAMRYRQAKN---SRRYYAIIQFETANDAEFVNSLANT 67
Query: 3426 PQRLYFGNSYLKVFPRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTLFKTRDVSVDF 3247
L++G SYLK D DI+PKPR ++ L+ L+FGC+ + + + +VSVDF
Sbjct: 68 GN-LWYGKSYLKSRKMDHDIVPKPRTALHSLQNLGLYFGCKTGKEELSYFWCSDNVSVDF 126
Query: 3246 GFGFRKLCFILSYKEPLKIKHVKYKLELSYESIWEIQLRRPKNLNSQFLIIQMLAAPKVY 3067
G RKL +L Y E V+YKLELSYE+IW+ +L P+ ++ L+ Q+L AP+++
Sbjct: 127 GIRIRKLICLLKYDE------VEYKLELSYENIWQTELYSPRGHTAKKLLFQLLGAPRIF 180
Query: 3066 VEPLSSLGNPGRD--LQYFMHTLDDQWVRATDFTESCSIGQSSALCLEIPYGCELPNFRE 2893
+ S G D Y T DDQW+R TDFT SC+IGQSSALCLE+PYG +LP+F E
Sbjct: 181 EKEADSSGQAYEDPFQNYCRETPDDQWIRTTDFTPSCAIGQSSALCLELPYGLQLPDFGE 240
Query: 2892 NFHYYT---EDKGWFTMQPGSTVSRSSDLVPVVGPPGGHQLRYDILFKVNSLVQNGCLSG 2722
NF Y D P S SDL +V PP + YDILFKVNSLVQ G L G
Sbjct: 241 NFPGYKGILRDLVTELCPPFSC----SDLGAMVCPPEYVGVPYDILFKVNSLVQQGWLPG 296
Query: 2721 QTLDANFFRMVDPCSHPVNHIMCALEKLFHLKDCCYEPVKWLTEQYLEYSLSANPPRSTS 2542
L NFF +VD + I AL+KL++L+D CYEP WL EQY++Y PP+S
Sbjct: 297 PKLGDNFFELVDAHRRDLACIEYALDKLYNLRDSCYEPSMWLEEQYMKYRRLKKPPKSPV 356
Query: 2541 ISLSDGLVYVRRVQITPLKVYFMGPEINVSNRVLRHYHDHIDNFIRISFVDEDSEKIRST 2362
ISL GLVYVRRVQIT ++++ GPE+N+SNRVLR+Y DNFIR+SFV E+ KI S
Sbjct: 357 ISLDSGLVYVRRVQITSCQIHYCGPEVNISNRVLRNYPMDTDNFIRVSFVGEELAKIYSA 416
Query: 2361 DLSTRATVNDEKKQTLLYDRILSTL 2287
DLS R + ++ ++T Y RILS L
Sbjct: 417 DLSPRKSTTNQDRKTKFYMRILSIL 441