BLASTX nr result
ID: Papaver30_contig00004886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00004886
(729 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011626898.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 100 2e-28
ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II su... 102 3e-28
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 4e-26
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 96 4e-26
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 96 4e-26
gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subu... 94 1e-25
ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II su... 93 2e-25
ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II su... 93 2e-25
gb|AKF43238.1| DNA-directed RNA polymerase II non-catalytic subu... 93 2e-25
gb|AKF43221.1| DNA-directed RNA polymerase II non-catalytic subu... 93 2e-25
gb|AKF43216.1| DNA-directed RNA polymerase II non-catalytic subu... 93 2e-25
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th... 93 2e-25
gb|AFK39298.1| unknown [Lotus japonicus] 93 2e-25
ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Th... 93 2e-25
gb|KHF99091.1| DNA-directed RNA polymerase II subunit RPB7 [Goss... 93 2e-25
ref|XP_007016302.1| DNA-directed RNA polymerase II isoform 6 [Th... 93 2e-25
ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Th... 93 2e-25
ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Th... 93 2e-25
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 92 3e-25
ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II su... 96 4e-25
>ref|XP_011626898.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB7 [Amborella trichopoda]
Length = 184
Score = 100 bits (248), Expect(3) = 2e-28
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKL+AKLMKDVEGTCSGRHGFVVAITGVDN+GKGLIRDGTG F
Sbjct: 17 HFGPHLRDKLIAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-28
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 37.0 bits (84), Expect(3) = 2e-28
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2
Query: 488 FKCFEYFGMAFSAEAGLVQIFVSNHVVAPDL 396
+K Y M F AEAG VQIFVSNH++ D+
Sbjct: 94 WKILXYVQMGFFAEAGPVQIFVSNHLIPDDM 124
>ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082116|ref|XP_010242493.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082119|ref|XP_010242494.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera]
Length = 177
Score = 102 bits (254), Expect(3) = 3e-28
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDN+GKGLIRDGTG F
Sbjct: 17 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 3e-28
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 3e-28
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 95.5 bits (236), Expect(3) = 4e-26
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG F
Sbjct: 76 HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 127
Score = 37.0 bits (84), Expect(3) = 4e-26
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 124 FVTFPVKYQCVVFRPF 139
Score = 33.9 bits (76), Expect(3) = 4e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 154 MGFFAEAGPVQIFVSNHLIPDDM 176
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7
[Brachypodium distachyon] gi|944070871|gb|KQK06355.1|
hypothetical protein BRADI_2g25940 [Brachypodium
distachyon]
Length = 177
Score = 95.5 bits (236), Expect(3) = 4e-26
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG F
Sbjct: 17 HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 4e-26
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 4e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 95.5 bits (236), Expect(3) = 4e-26
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG F
Sbjct: 17 HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 4e-26
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 4e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subunit [Erodium
trifolium]
Length = 176
Score = 94.0 bits (232), Expect(3) = 1e-25
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LVAKLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVAKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 1e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 1e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747084765|ref|XP_011089806.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085755|ref|XP_011090351.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085757|ref|XP_011090352.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085759|ref|XP_011090354.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085761|ref|XP_011090355.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum]
Length = 177
Score = 93.2 bits (230), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG +LRDKLVAKLMKDVEGTCSGRHGF+VAITG+++VGKGLIRDGTG F
Sbjct: 17 HFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Elaeis guineensis]
Length = 177
Score = 93.2 bits (230), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAIT V+++GKGLIR+GTG F
Sbjct: 17 HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|AKF43238.1| DNA-directed RNA polymerase II non-catalytic subunit [Pelargonium
nanum]
Length = 176
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRESLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|AKF43221.1| DNA-directed RNA polymerase II non-catalytic subunit [Francoa
sonchifolia] gi|817499350|gb|AKF43222.1| DNA-directed
RNA polymerase II non-catalytic subunit [Geranium
incanum] gi|817499352|gb|AKF43223.1| DNA-directed RNA
polymerase II non-catalytic subunit [Geranium maderense]
gi|817499354|gb|AKF43224.1| DNA-directed RNA polymerase
II non-catalytic subunit [Geranium phaeum]
gi|817499356|gb|AKF43225.1| DNA-directed RNA polymerase
II non-catalytic subunit [Hypseocharis bilobata]
gi|817499358|gb|AKF43226.1| DNA-directed RNA polymerase
II non-catalytic subunit [Melianthus villosus]
gi|817499360|gb|AKF43227.1| DNA-directed RNA polymerase
II non-catalytic subunit [Monsonia emarginata]
gi|817499362|gb|AKF43228.1| DNA-directed RNA polymerase
II non-catalytic subunit [Monsonia marlothii]
gi|817499364|gb|AKF43229.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium australe]
gi|817499366|gb|AKF43230.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium citronellum]
gi|817499368|gb|AKF43231.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium cotyledonis]
gi|817499370|gb|AKF43232.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium dichondrifolium]
gi|817499372|gb|AKF43233.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium echinatum]
gi|817499374|gb|AKF43234.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium exstipulatum]
gi|817499376|gb|AKF43235.1| DNA-directed RNA polymerase
II non-catalytic subunit [Pelargonium fulgidum]
Length = 176
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|AKF43216.1| DNA-directed RNA polymerase II non-catalytic subunit [Erodium
chrysanthum] gi|817499340|gb|AKF43217.1| DNA-directed
RNA polymerase II non-catalytic subunit [Erodium
foetidum] gi|817499342|gb|AKF43218.1| DNA-directed RNA
polymerase II non-catalytic subunit [Erodium gruinum]
gi|817499344|gb|AKF43219.1| DNA-directed RNA polymerase
II non-catalytic subunit [Erodium texanum]
Length = 176
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
II isoform 1 [Theobroma cacao]
Length = 176
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
+FG NLRD LVAKLMKDVEGTCSGRHGFVVA+TG++NVGKGLIRDGTG F
Sbjct: 17 YFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Theobroma cacao]
gi|508786664|gb|EOY33920.1| DNA-directed RNA polymerase
II isoform 5 [Theobroma cacao]
Length = 174
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>gb|KHF99091.1| DNA-directed RNA polymerase II subunit RPB7 [Gossypium arboreum]
Length = 173
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 92 MGFFAEAGPVQIFVSNHLIPDDM 114
>ref|XP_007016302.1| DNA-directed RNA polymerase II isoform 6 [Theobroma cacao]
gi|508786665|gb|EOY33921.1| DNA-directed RNA polymerase
II isoform 6 [Theobroma cacao]
Length = 173
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Theobroma cacao]
gi|508786662|gb|EOY33918.1| DNA-directed RNA polymerase
II isoform 3 [Theobroma cacao]
Length = 173
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 92 MGFFAEAGPVQIFVSNHLIPDDM 114
>ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Theobroma cacao]
gi|508786663|gb|EOY33919.1| DNA-directed RNA polymerase
II isoform 4 [Theobroma cacao]
Length = 157
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 2e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 2e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|778702031|ref|XP_011655124.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|778702034|ref|XP_011655125.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Cucumis
sativus] gi|700195707|gb|KGN50884.1| hypothetical
protein Csa_5G312340 [Cucumis sativus]
Length = 176
Score = 92.4 bits (228), Expect(3) = 3e-25
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++N+GKGLIRDGTG F
Sbjct: 17 HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIRDGTGFVTF 68
Score = 37.0 bits (84), Expect(3) = 3e-25
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQCVVF PF
Sbjct: 65 FVTFPVKYQCVVFRPF 80
Score = 33.9 bits (76), Expect(3) = 3e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
>ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 isoform X2
[Musa acuminata subsp. malaccensis]
Length = 177
Score = 95.5 bits (236), Expect(3) = 4e-25
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -1
Query: 729 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGL*RF 574
HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG F
Sbjct: 17 HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Score = 33.9 bits (76), Expect(3) = 4e-25
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 464 MAFSAEAGLVQIFVSNHVVAPDL 396
M F AEAG VQIFVSNH++ D+
Sbjct: 95 MGFFAEAGPVQIFVSNHLIPDDM 117
Score = 33.5 bits (75), Expect(3) = 4e-25
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3
Query: 586 FVTFPVKYQCVVFTPF 539
FVTFPVKYQ VVF PF
Sbjct: 65 FVTFPVKYQAVVFRPF 80