BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00002757
         (1730 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255357.1| PREDICTED: mediator of RNA polymerase II tra...   523   e-145
ref|XP_010255352.1| PREDICTED: mediator of RNA polymerase II tra...   523   e-145
ref|XP_010661792.1| PREDICTED: mediator of RNA polymerase II tra...   474   e-130
ref|XP_002274479.2| PREDICTED: mediator of RNA polymerase II tra...   474   e-130
ref|XP_010241891.1| PREDICTED: mediator of RNA polymerase II tra...   471   e-130
ref|XP_010241889.1| PREDICTED: mediator of RNA polymerase II tra...   471   e-130
ref|XP_010241888.1| PREDICTED: mediator of RNA polymerase II tra...   471   e-130
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   460   e-126
ref|XP_007220570.1| hypothetical protein PRUPE_ppa000036mg [Prun...   453   e-124
ref|XP_008232897.1| PREDICTED: mediator of RNA polymerase II tra...   452   e-124
ref|XP_010105926.1| Putative mediator of RNA polymerase II trans...   447   e-122
ref|XP_009340104.1| PREDICTED: mediator of RNA polymerase II tra...   443   e-121
ref|XP_012083389.1| PREDICTED: mediator of RNA polymerase II tra...   440   e-120
ref|XP_008338849.1| PREDICTED: mediator of RNA polymerase II tra...   440   e-120
ref|XP_009367854.1| PREDICTED: mediator of RNA polymerase II tra...   437   e-119
ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus t...   436   e-119
gb|KJB38933.1| hypothetical protein B456_007G099500 [Gossypium r...   431   e-118
gb|KJB38928.1| hypothetical protein B456_007G099500 [Gossypium r...   431   e-118
gb|KJB38926.1| hypothetical protein B456_007G099500 [Gossypium r...   431   e-118
ref|XP_012489946.1| PREDICTED: mediator of RNA polymerase II tra...   431   e-118

>ref|XP_010255357.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X2 [Nelumbo nucifera]
          Length = 2260

 Score =  523 bits (1346), Expect = e-145
 Identities = 307/579 (53%), Positives = 376/579 (64%), Gaps = 13/579 (2%)
 Frame = -3

Query: 1707 RDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIPSHII 1528
            RDQS P  L +GSV    GDS  T L D E P +HFKWWYMVRILQ H+AE L++PSHII
Sbjct: 272  RDQS-PQMLLAGSVHK--GDSTPT-LTDDEEPSLHFKWWYMVRILQWHHAEGLVLPSHII 327

Query: 1527 DWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGESNLV 1348
            +WVL QLQ+K SL+T QLLLPI++++IE+I LSQTY R+LVE+AVR I E S  G S+LV
Sbjct: 328  EWVLSQLQDKESLETLQLLLPIIYAMIETIVLSQTYVRNLVEVAVRSIQEPS-SGGSDLV 386

Query: 1347 DGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKVPASR 1168
            D SR+AY + A++EMLRYLIVAVPDT V+L+C P+ P V     V   R FF      S 
Sbjct: 387  DNSRRAYTASAVIEMLRYLIVAVPDTFVALECFPLAPSVI--SGVTNGRSFFSKASEDSE 444

Query: 1167 K---------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAKALQA 1015
            K         ++ G + +DAH++F S D ++SSI+KRADNL KAVSPG+QGHGVAKA+QA
Sbjct: 445  KTHYGPGELITMYGDRRQDAHNQFLSFDYLVSSIQKRADNLGKAVSPGLQGHGVAKAVQA 504

Query: 1014 LDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVSASLIC 838
            LDKAL LGD+RGAYN LF E+L DG+ E V     WIA VSP L SS+ W   VS S IC
Sbjct: 505  LDKALTLGDLRGAYNFLF-ENLCDGNIEEV-----WIAEVSPCLYSSMKWMGMVSFSFIC 558

Query: 837  SIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLFRCX 658
            S+FFL EWATCDFRDCRT S+  D K +G  DFSQVY+A LLLKMK + +C++       
Sbjct: 559  SLFFLFEWATCDFRDCRT-SLPLDLKFTGRKDFSQVYIAVLLLKMKMEDMCNS------- 610

Query: 657  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSSEKK 478
                                                GS     +  G    E+ F S+ K
Sbjct: 611  -------------------------------IQSKNGSTLGAGIFSGGTTGENVFVSKNK 639

Query: 477  PKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILSGIFRPQ 298
             K+   G    SSD FQSPGPVHDI+VCWIDQH V K EG KRLQLLI+ELI SGIF P 
Sbjct: 640  SKSL--GGRIDSSDIFQSPGPVHDIIVCWIDQHDVGKGEGFKRLQLLIIELIRSGIFYPP 697

Query: 297  AYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMSMETMSV 118
            AYVRQL+VSGIM++ ET +D D++KRHY VLKQLPG  + ++ EEAQ A +P+  E + V
Sbjct: 698  AYVRQLIVSGIMDRSETLVDLDRRKRHYHVLKQLPGAYMLDSLEEAQIADVPVLEEALHV 757

Query: 117  YSSERHLILHGFLG---GQSKNRTSTDCVSSTEKDNRTS 10
            Y++ER L+L G LG     SKN       S  +KDN +S
Sbjct: 758  YANERRLLLLGLLGDHTSHSKNGNDVSFFSPKQKDNPSS 796


>ref|XP_010255352.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X1 [Nelumbo nucifera]
            gi|719998247|ref|XP_010255353.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X1 [Nelumbo nucifera] gi|719998250|ref|XP_010255354.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like isoform X1 [Nelumbo nucifera]
            gi|719998254|ref|XP_010255355.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X1 [Nelumbo nucifera] gi|719998257|ref|XP_010255356.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like isoform X1 [Nelumbo nucifera]
          Length = 2265

 Score =  523 bits (1346), Expect = e-145
 Identities = 307/579 (53%), Positives = 376/579 (64%), Gaps = 13/579 (2%)
 Frame = -3

Query: 1707 RDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIPSHII 1528
            RDQS P  L +GSV    GDS  T L D E P +HFKWWYMVRILQ H+AE L++PSHII
Sbjct: 272  RDQS-PQMLLAGSVHK--GDSTPT-LTDDEEPSLHFKWWYMVRILQWHHAEGLVLPSHII 327

Query: 1527 DWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGESNLV 1348
            +WVL QLQ+K SL+T QLLLPI++++IE+I LSQTY R+LVE+AVR I E S  G S+LV
Sbjct: 328  EWVLSQLQDKESLETLQLLLPIIYAMIETIVLSQTYVRNLVEVAVRSIQEPS-SGGSDLV 386

Query: 1347 DGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKVPASR 1168
            D SR+AY + A++EMLRYLIVAVPDT V+L+C P+ P V     V   R FF      S 
Sbjct: 387  DNSRRAYTASAVIEMLRYLIVAVPDTFVALECFPLAPSVI--SGVTNGRSFFSKASEDSE 444

Query: 1167 K---------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAKALQA 1015
            K         ++ G + +DAH++F S D ++SSI+KRADNL KAVSPG+QGHGVAKA+QA
Sbjct: 445  KTHYGPGELITMYGDRRQDAHNQFLSFDYLVSSIQKRADNLGKAVSPGLQGHGVAKAVQA 504

Query: 1014 LDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVSASLIC 838
            LDKAL LGD+RGAYN LF E+L DG+ E V     WIA VSP L SS+ W   VS S IC
Sbjct: 505  LDKALTLGDLRGAYNFLF-ENLCDGNIEEV-----WIAEVSPCLYSSMKWMGMVSFSFIC 558

Query: 837  SIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLFRCX 658
            S+FFL EWATCDFRDCRT S+  D K +G  DFSQVY+A LLLKMK + +C++       
Sbjct: 559  SLFFLFEWATCDFRDCRT-SLPLDLKFTGRKDFSQVYIAVLLLKMKMEDMCNS------- 610

Query: 657  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSSEKK 478
                                                GS     +  G    E+ F S+ K
Sbjct: 611  -------------------------------IQSKNGSTLGAGIFSGGTTGENVFVSKNK 639

Query: 477  PKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILSGIFRPQ 298
             K+   G    SSD FQSPGPVHDI+VCWIDQH V K EG KRLQLLI+ELI SGIF P 
Sbjct: 640  SKSL--GGRIDSSDIFQSPGPVHDIIVCWIDQHDVGKGEGFKRLQLLIIELIRSGIFYPP 697

Query: 297  AYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMSMETMSV 118
            AYVRQL+VSGIM++ ET +D D++KRHY VLKQLPG  + ++ EEAQ A +P+  E + V
Sbjct: 698  AYVRQLIVSGIMDRSETLVDLDRRKRHYHVLKQLPGAYMLDSLEEAQIADVPVLEEALHV 757

Query: 117  YSSERHLILHGFLG---GQSKNRTSTDCVSSTEKDNRTS 10
            Y++ER L+L G LG     SKN       S  +KDN +S
Sbjct: 758  YANERRLLLLGLLGDHTSHSKNGNDVSFFSPKQKDNPSS 796


>ref|XP_010661792.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X1 [Vitis vinifera]
            gi|731421562|ref|XP_010661793.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 isoform X1
            [Vitis vinifera] gi|731421564|ref|XP_010661794.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 isoform X1 [Vitis vinifera]
            gi|731421566|ref|XP_010661795.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 isoform X1
            [Vitis vinifera]
          Length = 2273

 Score =  474 bits (1219), Expect = e-130
 Identities = 281/586 (47%), Positives = 363/586 (61%), Gaps = 18/586 (3%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+S    L++GS+Q+K    +     D E P +HFKWWY+VRILQ H+AE L
Sbjct: 271  SHSTQHSRDKSQ-QILYAGSIQHKSDPVSGL---DSEEPSLHFKWWYVVRILQWHHAEGL 326

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDW L QLQ+K  L+  QLLLPI++ +IE++ LSQTY R+LV +AVR+I E S 
Sbjct: 327  ILPSLIIDWALRQLQDKELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKEPS- 385

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCV-------------Y 1228
            PG S+LVD SR+AY S ALVEMLR+LI+AVPDT V+LDC P+PPCV              
Sbjct: 386  PGGSDLVDNSRRAYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFLTKV 445

Query: 1227 LSDSVNCSRRFFPSKVPASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGV 1048
              D++    R  P++VP    ++   K  D      S D+I+SSI+KRADNLAKA SPG 
Sbjct: 446  SEDTIKIKNR--PAEVP----TVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKAASPGY 499

Query: 1047 QGHGVAKALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTW 868
              H  AKA+QALDKAL+ GDVRGAY  LF +D  DG+  V E  GWIA VSP LRSSL W
Sbjct: 500  PCHSEAKAVQALDKALVDGDVRGAYKFLF-DDHCDGA--VNE--GWIAEVSPCLRSSLKW 554

Query: 867  FSSVSASLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMK---- 700
              +VS+SL+CS+FFLCEWATCDFRD RT+    D K +G  DFSQVY+A  LLK+K    
Sbjct: 555  IGTVSSSLVCSVFFLCEWATCDFRDFRTAP-PHDMKFTGRKDFSQVYIAIRLLKLKLRDV 613

Query: 699  -NDYICSTSSLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVS 523
             N   C  +S                                     +LA+GS      +
Sbjct: 614  QNPGCCKNNS--------------------------------TAGINTLAKGSSQPNN-N 640

Query: 522  DGTVVVEDTFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQ 343
             G + V + + ++   KN  + +S  S D FQSPGP+HDI+VCWIDQH   K EG KRLQ
Sbjct: 641  SGRISVVNAYENKNNLKNM-DRASIDSLDIFQSPGPLHDIIVCWIDQHEAHKGEGFKRLQ 699

Query: 342  LLIVELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEE 163
            LLI+EL  SGIF PQ YVRQL+VSGIM++    +D D++KRHY++LKQLPG  +R+A E 
Sbjct: 700  LLIMELARSGIFYPQVYVRQLIVSGIMDRYGPIVDLDRRKRHYRILKQLPGSYMRDALEG 759

Query: 162  AQGAFIPMSMETMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEK 25
            AQ   + +  + + +YS+ER L+L G L  Q K++      S   K
Sbjct: 760  AQVTEVGLLSDAILIYSNERRLVLQGLLWDQYKSKNIASISSRRPK 805


>ref|XP_002274479.2| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X2 [Vitis vinifera]
          Length = 2272

 Score =  474 bits (1219), Expect = e-130
 Identities = 281/586 (47%), Positives = 363/586 (61%), Gaps = 18/586 (3%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+S    L++GS+Q+K    +     D E P +HFKWWY+VRILQ H+AE L
Sbjct: 270  SHSTQHSRDKSQ-QILYAGSIQHKSDPVSGL---DSEEPSLHFKWWYVVRILQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDW L QLQ+K  L+  QLLLPI++ +IE++ LSQTY R+LV +AVR+I E S 
Sbjct: 326  ILPSLIIDWALRQLQDKELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKEPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCV-------------Y 1228
            PG S+LVD SR+AY S ALVEMLR+LI+AVPDT V+LDC P+PPCV              
Sbjct: 385  PGGSDLVDNSRRAYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFLTKV 444

Query: 1227 LSDSVNCSRRFFPSKVPASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGV 1048
              D++    R  P++VP    ++   K  D      S D+I+SSI+KRADNLAKA SPG 
Sbjct: 445  SEDTIKIKNR--PAEVP----TVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKAASPGY 498

Query: 1047 QGHGVAKALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTW 868
              H  AKA+QALDKAL+ GDVRGAY  LF +D  DG+  V E  GWIA VSP LRSSL W
Sbjct: 499  PCHSEAKAVQALDKALVDGDVRGAYKFLF-DDHCDGA--VNE--GWIAEVSPCLRSSLKW 553

Query: 867  FSSVSASLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMK---- 700
              +VS+SL+CS+FFLCEWATCDFRD RT+    D K +G  DFSQVY+A  LLK+K    
Sbjct: 554  IGTVSSSLVCSVFFLCEWATCDFRDFRTAP-PHDMKFTGRKDFSQVYIAIRLLKLKLRDV 612

Query: 699  -NDYICSTSSLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVS 523
             N   C  +S                                     +LA+GS      +
Sbjct: 613  QNPGCCKNNS--------------------------------TAGINTLAKGSSQPNN-N 639

Query: 522  DGTVVVEDTFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQ 343
             G + V + + ++   KN  + +S  S D FQSPGP+HDI+VCWIDQH   K EG KRLQ
Sbjct: 640  SGRISVVNAYENKNNLKNM-DRASIDSLDIFQSPGPLHDIIVCWIDQHEAHKGEGFKRLQ 698

Query: 342  LLIVELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEE 163
            LLI+EL  SGIF PQ YVRQL+VSGIM++    +D D++KRHY++LKQLPG  +R+A E 
Sbjct: 699  LLIMELARSGIFYPQVYVRQLIVSGIMDRYGPIVDLDRRKRHYRILKQLPGSYMRDALEG 758

Query: 162  AQGAFIPMSMETMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEK 25
            AQ   + +  + + +YS+ER L+L G L  Q K++      S   K
Sbjct: 759  AQVTEVGLLSDAILIYSNERRLVLQGLLWDQYKSKNIASISSRRPK 804


>ref|XP_010241891.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X4 [Nelumbo nucifera]
          Length = 1902

 Score =  471 bits (1212), Expect = e-130
 Identities = 296/584 (50%), Positives = 364/584 (62%), Gaps = 16/584 (2%)
 Frame = -3

Query: 1707 RDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIPSHII 1528
            RD+S P  L +GSV    GDS S  L + E P ++FKWWYMVRI++ H++E LL PS +I
Sbjct: 268  RDES-PQILLAGSVHK--GDS-SLGLTESEEPSLYFKWWYMVRIIRWHHSEGLLYPSLVI 323

Query: 1527 DWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGESNLV 1348
            DWVL QLQ+K SL+T QLLLPI++ +IE+I LSQTY  +LVE+AVR I E S    S+LV
Sbjct: 324  DWVLNQLQDKESLETLQLLLPIIYGLIETIVLSQTYVHNLVEVAVRSIQESS--SGSDLV 381

Query: 1347 DGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKVPASR 1168
            D S+KAYI+ A+VEML YLIVAVPDT V+LDC P+P  V LS   N  RRFF SKV    
Sbjct: 382  DNSQKAYIASAMVEMLWYLIVAVPDTFVALDCFPLPLPV-LSGVAN--RRFFLSKVSEDA 438

Query: 1167 K----------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAKALQ 1018
            +          +L G K + AH  F + D ++SSI+KRADNL KAVSP  QGHGVAKA+Q
Sbjct: 439  EKTRNGAEELLTLYGEKRQVAHHHFLTFDYVVSSIQKRADNLVKAVSPVPQGHGVAKAVQ 498

Query: 1017 ALDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVSASLI 841
            ALDKAL LGD++ AYN LF EDL DG  E +     WIA VSP L+SSL W  +VS S I
Sbjct: 499  ALDKALTLGDLKRAYNFLF-EDLCDGCIEEI-----WIAKVSPCLQSSLKWMGTVSFSFI 552

Query: 840  CSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYI-----CSTS 676
            CS+FFL EWATCDFRD RT S+  D K +G  DFSQVY+A LLLKMK + +     C   
Sbjct: 553  CSLFFLFEWATCDFRDFRT-SLPCDLKFTGRKDFSQVYIAVLLLKMKIEDMHTSNQCKNG 611

Query: 675  SLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDT 496
            S F                                   +L   + H    S G V  E+ 
Sbjct: 612  STF--------------------------------GANNLGRDASHHDSFSGG-VTGENV 638

Query: 495  FSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILS 316
               + K KN   G    SSD F+SPGPVHDI+VCWIDQH V K EG KRLQLLI+ELI S
Sbjct: 639  SIRKNKSKNL--GGRIDSSDIFESPGPVHDIIVCWIDQHEVGKGEGFKRLQLLIMELICS 696

Query: 315  GIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMS 136
            GIF P AY RQL+VSGIM++ ET +D D+++RHY VLKQLPG  + +   E + A I   
Sbjct: 697  GIFNPPAYARQLIVSGIMDRSETLVDLDRRRRHYFVLKQLPGAYMLDFL-EVRIADISAL 755

Query: 135  METMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEKDNRTSLD 4
             E ++VYS+ER L+LHG L   + +       S    DN  ++D
Sbjct: 756  EEALNVYSNERRLLLHGLLSDLTSH-------SRNGNDNNVNID 792


>ref|XP_010241889.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X2 [Nelumbo nucifera]
          Length = 2244

 Score =  471 bits (1212), Expect = e-130
 Identities = 296/584 (50%), Positives = 364/584 (62%), Gaps = 16/584 (2%)
 Frame = -3

Query: 1707 RDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIPSHII 1528
            RD+S P  L +GSV    GDS S  L + E P ++FKWWYMVRI++ H++E LL PS +I
Sbjct: 268  RDES-PQILLAGSVHK--GDS-SLGLTESEEPSLYFKWWYMVRIIRWHHSEGLLYPSLVI 323

Query: 1527 DWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGESNLV 1348
            DWVL QLQ+K SL+T QLLLPI++ +IE+I LSQTY  +LVE+AVR I E S    S+LV
Sbjct: 324  DWVLNQLQDKESLETLQLLLPIIYGLIETIVLSQTYVHNLVEVAVRSIQESS--SGSDLV 381

Query: 1347 DGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKVPASR 1168
            D S+KAYI+ A+VEML YLIVAVPDT V+LDC P+P  V LS   N  RRFF SKV    
Sbjct: 382  DNSQKAYIASAMVEMLWYLIVAVPDTFVALDCFPLPLPV-LSGVAN--RRFFLSKVSEDA 438

Query: 1167 K----------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAKALQ 1018
            +          +L G K + AH  F + D ++SSI+KRADNL KAVSP  QGHGVAKA+Q
Sbjct: 439  EKTRNGAEELLTLYGEKRQVAHHHFLTFDYVVSSIQKRADNLVKAVSPVPQGHGVAKAVQ 498

Query: 1017 ALDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVSASLI 841
            ALDKAL LGD++ AYN LF EDL DG  E +     WIA VSP L+SSL W  +VS S I
Sbjct: 499  ALDKALTLGDLKRAYNFLF-EDLCDGCIEEI-----WIAKVSPCLQSSLKWMGTVSFSFI 552

Query: 840  CSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYI-----CSTS 676
            CS+FFL EWATCDFRD RT S+  D K +G  DFSQVY+A LLLKMK + +     C   
Sbjct: 553  CSLFFLFEWATCDFRDFRT-SLPCDLKFTGRKDFSQVYIAVLLLKMKIEDMHTSNQCKNG 611

Query: 675  SLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDT 496
            S F                                   +L   + H    S G V  E+ 
Sbjct: 612  STF--------------------------------GANNLGRDASHHDSFSGG-VTGENV 638

Query: 495  FSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILS 316
               + K KN   G    SSD F+SPGPVHDI+VCWIDQH V K EG KRLQLLI+ELI S
Sbjct: 639  SIRKNKSKNL--GGRIDSSDIFESPGPVHDIIVCWIDQHEVGKGEGFKRLQLLIMELICS 696

Query: 315  GIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMS 136
            GIF P AY RQL+VSGIM++ ET +D D+++RHY VLKQLPG  + +   E + A I   
Sbjct: 697  GIFNPPAYARQLIVSGIMDRSETLVDLDRRRRHYFVLKQLPGAYMLDFL-EVRIADISAL 755

Query: 135  METMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEKDNRTSLD 4
             E ++VYS+ER L+LHG L   + +       S    DN  ++D
Sbjct: 756  EEALNVYSNERRLLLHGLLSDLTSH-------SRNGNDNNVNID 792


>ref|XP_010241888.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            isoform X1 [Nelumbo nucifera]
          Length = 2249

 Score =  471 bits (1212), Expect = e-130
 Identities = 296/584 (50%), Positives = 364/584 (62%), Gaps = 16/584 (2%)
 Frame = -3

Query: 1707 RDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIPSHII 1528
            RD+S P  L +GSV    GDS S  L + E P ++FKWWYMVRI++ H++E LL PS +I
Sbjct: 268  RDES-PQILLAGSVHK--GDS-SLGLTESEEPSLYFKWWYMVRIIRWHHSEGLLYPSLVI 323

Query: 1527 DWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGESNLV 1348
            DWVL QLQ+K SL+T QLLLPI++ +IE+I LSQTY  +LVE+AVR I E S    S+LV
Sbjct: 324  DWVLNQLQDKESLETLQLLLPIIYGLIETIVLSQTYVHNLVEVAVRSIQESS--SGSDLV 381

Query: 1347 DGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKVPASR 1168
            D S+KAYI+ A+VEML YLIVAVPDT V+LDC P+P  V LS   N  RRFF SKV    
Sbjct: 382  DNSQKAYIASAMVEMLWYLIVAVPDTFVALDCFPLPLPV-LSGVAN--RRFFLSKVSEDA 438

Query: 1167 K----------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAKALQ 1018
            +          +L G K + AH  F + D ++SSI+KRADNL KAVSP  QGHGVAKA+Q
Sbjct: 439  EKTRNGAEELLTLYGEKRQVAHHHFLTFDYVVSSIQKRADNLVKAVSPVPQGHGVAKAVQ 498

Query: 1017 ALDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVSASLI 841
            ALDKAL LGD++ AYN LF EDL DG  E +     WIA VSP L+SSL W  +VS S I
Sbjct: 499  ALDKALTLGDLKRAYNFLF-EDLCDGCIEEI-----WIAKVSPCLQSSLKWMGTVSFSFI 552

Query: 840  CSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYI-----CSTS 676
            CS+FFL EWATCDFRD RT S+  D K +G  DFSQVY+A LLLKMK + +     C   
Sbjct: 553  CSLFFLFEWATCDFRDFRT-SLPCDLKFTGRKDFSQVYIAVLLLKMKIEDMHTSNQCKNG 611

Query: 675  SLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDT 496
            S F                                   +L   + H    S G V  E+ 
Sbjct: 612  STF--------------------------------GANNLGRDASHHDSFSGG-VTGENV 638

Query: 495  FSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILS 316
               + K KN   G    SSD F+SPGPVHDI+VCWIDQH V K EG KRLQLLI+ELI S
Sbjct: 639  SIRKNKSKNL--GGRIDSSDIFESPGPVHDIIVCWIDQHEVGKGEGFKRLQLLIMELICS 696

Query: 315  GIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMS 136
            GIF P AY RQL+VSGIM++ ET +D D+++RHY VLKQLPG  + +   E + A I   
Sbjct: 697  GIFNPPAYARQLIVSGIMDRSETLVDLDRRRRHYFVLKQLPGAYMLDFL-EVRIADISAL 755

Query: 135  METMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEKDNRTSLD 4
             E ++VYS+ER L+LHG L   + +       S    DN  ++D
Sbjct: 756  EEALNVYSNERRLLLHGLLSDLTSH-------SRNGNDNNVNID 792


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score =  460 bits (1184), Expect = e-126
 Identities = 276/582 (47%), Positives = 360/582 (61%), Gaps = 8/582 (1%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+S P  L++GSVQ +  D A+ ++ DGE P +HFKWWY+VR+L  H++E L
Sbjct: 271  SHSALHTRDRS-PQMLYAGSVQYRS-DPATFSI-DGEEPSLHFKWWYVVRLLHWHHSEGL 327

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+PS IIDWVL QLQEK  L+  QLLLPI++ +++S+ LSQTY R+L  +AV YI E S 
Sbjct: 328  LLPSIIIDWVLSQLQEKDLLEILQLLLPIIYGVLDSVVLSQTYVRTLAGIAVHYIREPS- 386

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVY---LSDSVNCSRR 1198
            PG S+LVD SR+AY + AL+EMLRYLI+AVPDT V++DC P+PP V    ++D V  SR 
Sbjct: 387  PGGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVFVSRA 446

Query: 1197 FFPSKVPASRKSLCGG----KERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVA 1030
               ++      +   G    K  DA  +  S + ++ SI+KR DNLAKA  PG   H  A
Sbjct: 447  SEEARKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKAACPGYLVHSAA 506

Query: 1029 KALQALDKALILGDVRGAYNVLFVEDLFDGS-EGVGEGCGWIAAVSPSLRSSLTWFSSVS 853
            KA+QALDKALILGD++ AYN LF E+  DG+ +G     GWI  VSP LRSSL W  SV 
Sbjct: 507  KAVQALDKALILGDIKEAYNFLF-ENFCDGAVDG-----GWIEEVSPCLRSSLKWMGSVD 560

Query: 852  ASLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSS 673
             S +CS+FFLCEWATCD+RD RT+    D K +G  DFSQVY+A  LLK+K         
Sbjct: 561  LSFVCSVFFLCEWATCDYRDFRTAP-PHDLKFTGRKDFSQVYIATRLLKLK--------- 610

Query: 672  LFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTF 493
             FR                                  SLA+G      V  G   V   +
Sbjct: 611  -FR-----------------DLQSKPRRKNEKSLGINSLAKGLSQHNYV--GRAHVRSGY 650

Query: 492  SSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILSG 313
             +    K      ST SSD F+SPGP+HDI+VCWIDQH V+K EG KRLQLLIVELI SG
Sbjct: 651  ETIGNSK-IVNAKSTNSSDIFESPGPLHDIIVCWIDQHEVQKREGLKRLQLLIVELIRSG 709

Query: 312  IFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMSM 133
            IF PQ+YVRQL++SGIM+     ++ D++KRHYQ+LKQLPG  + +  EEA+ A  P  +
Sbjct: 710  IFYPQSYVRQLIISGIMDANVPAVELDRRKRHYQILKQLPGLFIHDILEEARIAEGPELL 769

Query: 132  ETMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEKDNRTSL 7
            E M +YS+ER L+L G L  Q ++   ++     +K + TS+
Sbjct: 770  EAMLIYSNERRLLLCGILSEQCQDSVKSNISVQKQKHHTTSI 811


>ref|XP_007220570.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
            gi|462417032|gb|EMJ21769.1| hypothetical protein
            PRUPE_ppa000036mg [Prunus persica]
          Length = 2210

 Score =  453 bits (1166), Expect = e-124
 Identities = 270/566 (47%), Positives = 346/566 (61%), Gaps = 10/566 (1%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S++  RD+S P TL++GSV  +  D AS A+PDGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 270  SHSTSHNRDRS-PQTLYAGSVPQRS-DPAS-AVPDGEEPSLHFKWWYVVRLLQWHHAEGL 326

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+P+ II+WVL QLQEK  L+  QLLLPIV+ ++E++ LSQTY R+LV +AVR+I E S 
Sbjct: 327  LLPTLIIEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPS- 385

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
             G S++V  SR+AY    +VEMLRYLI+AVPDT V+LDC P+P CV +S  VN       
Sbjct: 386  QGGSDVVGNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCV-VSYIVNDGLPKMS 444

Query: 1188 SKV------PASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
              V      PA   S    K  DA  +  + D+++SSI+KRADNLAKA SP    H +AK
Sbjct: 445  EDVRKIGNGPAEVASAFRSKGFDAQYQSLAFDHVVSSIQKRADNLAKAASPSYPFHSIAK 504

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+QALD++L+ GDVRGAY  LF ED  DG         WI  VSP LR+SL W  + + S
Sbjct: 505  AVQALDRSLVQGDVRGAYRFLF-EDPCDGVANE----SWITGVSPCLRTSLKWIGTANLS 559

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMK-NDYICSTSSL 670
             +CS+FFLCEWATCDFRD RT+    + K +G  DFSQV++   LLK+K  D  CS    
Sbjct: 560  FVCSVFFLCEWATCDFRDFRTAPPC-ELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQ-- 616

Query: 669  FRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFS 490
                                                 L  GS   G        V  +  
Sbjct: 617  -------------------------------RKNDSFLGVGSVAKGSTQHNNFPVRISMG 645

Query: 489  SEKKPKNFYEGS---STGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELIL 319
            +  + KN  +     S  SS+ F+SPGP+HDI+VCWIDQH   K EG KRLQLL++ELI 
Sbjct: 646  NSYETKNRSKNGDQRSIKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIR 705

Query: 318  SGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPM 139
            SGIF P AYVRQL+VSGIM+     ++ D++KRHYQ+LK LPG  +R A +EA  A  P 
Sbjct: 706  SGIFHPHAYVRQLIVSGIMDTDGPVVEVDRRKRHYQILKLLPGLLMRHALKEAGIAEEPQ 765

Query: 138  SMETMSVYSSERHLILHGFLGGQSKN 61
              E M++YS+ER LIL G L  Q+KN
Sbjct: 766  LSEAMNLYSTERRLILRGLLSDQNKN 791


>ref|XP_008232897.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Prunus mume]
          Length = 2277

 Score =  452 bits (1162), Expect = e-124
 Identities = 269/566 (47%), Positives = 345/566 (60%), Gaps = 10/566 (1%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S++  RD+S P TL++GSV  +  DS S  L DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 270  SHSTSHNRDRS-PQTLYAGSVPQRS-DSTSAVL-DGEEPSLHFKWWYVVRLLQWHHAEGL 326

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+P+ II+WVL QLQEK  L+  QLLLPIV+ ++E++ LSQTY R+LV +AVR+I E S 
Sbjct: 327  LLPTLIIEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPS- 385

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
             G S++VD SR+AY    +VEMLRYLI+AVPDT V+LDC P+P CV +S  VN       
Sbjct: 386  QGGSDVVDNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCV-VSYIVNDGLSKMS 444

Query: 1188 SKV------PASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
              V       A   S    K  DA  +  + D+++SSI+KRADNLAKA SP    H +AK
Sbjct: 445  EDVRKIGNGSAEVASAFRSKGFDAQYQSLAFDHVVSSIQKRADNLAKAASPSYPVHSIAK 504

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+QALD++L+ GDVRGAY  LF ED  DG         WI  VSP LR+SL W  + + S
Sbjct: 505  AVQALDRSLVQGDVRGAYRFLF-EDPCDGVANE----SWITGVSPCLRTSLKWIGTANLS 559

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMK-NDYICSTSSL 670
             +CS+FFLCEWATCDFRD RT+    + K +G  DFSQV++   LLK+K  D  CS    
Sbjct: 560  FVCSVFFLCEWATCDFRDFRTAPPC-ELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQ-- 616

Query: 669  FRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFS 490
                                                 L  GS   G        V  +  
Sbjct: 617  -------------------------------RKNDSFLGVGSVAKGSTQHNNFPVRISMG 645

Query: 489  SEKKPKNFYEGS---STGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELIL 319
            +  + KN  +     ST SS+ F+SPGP+HDI+VCWIDQH   K EG KRLQLL++ELI 
Sbjct: 646  NSYETKNRSKNGDQRSTKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIR 705

Query: 318  SGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPM 139
            SGIF P AYVRQL+V GIM+     ++ D++KRHY++LK LPG  +R+A EEA  A  P 
Sbjct: 706  SGIFHPHAYVRQLIVCGIMDTDGPVVEVDRRKRHYRILKLLPGLLMRDALEEAGIAEEPQ 765

Query: 138  SMETMSVYSSERHLILHGFLGGQSKN 61
              E M++YS+ER LIL G L  Q+KN
Sbjct: 766  LSEAMNLYSTERRLILRGLLSDQNKN 791


>ref|XP_010105926.1| Putative mediator of RNA polymerase II transcription subunit 12
            [Morus notabilis] gi|587919337|gb|EXC06808.1| Putative
            mediator of RNA polymerase II transcription subunit 12
            [Morus notabilis]
          Length = 2274

 Score =  447 bits (1149), Expect = e-122
 Identities = 268/567 (47%), Positives = 361/567 (63%), Gaps = 7/567 (1%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S++  RD+S+   L++GSV  +  D  S  L D E   +HFKWWYM+R+LQ H A+ L
Sbjct: 270  SHSTSHSRDRST-QFLYAGSVHQRS-DPVSAGL-DIEDSSLHFKWWYMMRLLQWHYADGL 326

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDWVL QLQ+K SL+  QLLLPI++ ++E++ LSQTY RSLV +AVR+I E S 
Sbjct: 327  ILPSLIIDWVLRQLQDKESLEIVQLLLPIIYGVLETVVLSQTYVRSLVGIAVRFIREPS- 385

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCV--YLSDSVNCSRRF 1195
            PG S+LVD SRKAY + ALVEMLRYLIVAVPDT V+LDC P+P CV  ++    + S+  
Sbjct: 386  PGGSDLVDNSRKAYTTSALVEMLRYLIVAVPDTFVALDCFPLPSCVVSHVVADGSLSKSS 445

Query: 1194 FPS----KVPASRKSL-CGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVA 1030
            F      K+ +S  S+    K  DA  +  ++D ++SSI+KRAD+LAKA  PG  GH VA
Sbjct: 446  FEDVRKIKIGSSEISVPFRSKGLDAQYQSLALDYVVSSIQKRADSLAKAARPGYPGHSVA 505

Query: 1029 KALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSA 850
            K ++ALD++ +LGDVRGAY  LF EDL +G+  V E   WIA VSP LRSSL W  +VS 
Sbjct: 506  KVVEALDRSRVLGDVRGAYTFLF-EDLCEGA--VNE--HWIAEVSPCLRSSLKWIGTVSL 560

Query: 849  SLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSL 670
            SL+CS+F LCEWATCDFRD RT+   +  K +G  DFSQVY+A  +LK+K + + S+   
Sbjct: 561  SLVCSVFLLCEWATCDFRDFRTAPPDK-LKFTGRKDFSQVYIAIRILKLKAEGLQSSC-- 617

Query: 669  FRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFS 490
             RC                                   ++ +  L + S G     D + 
Sbjct: 618  -RCKSDNSLGVKTITKSS--------------------SQQNSFLARTSMG-----DLYD 651

Query: 489  SEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILSGI 310
             +   +N  +  S  +S  F+SPG +HDI+VCWIDQH   K +G +RLQLLIVELI +GI
Sbjct: 652  LKSNIRN-VDQQSMKTSCIFESPGALHDIVVCWIDQHEACKGDGFQRLQLLIVELIRAGI 710

Query: 309  FRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMSME 130
            F PQAYVRQL+VSGIM    + +D+D++KRHY++L+QLP   +R+A +EA  A  P  +E
Sbjct: 711  FYPQAYVRQLMVSGIMEMNGSTVDADRRKRHYRILRQLPEFFVRDALQEAGFAEGPQLLE 770

Query: 129  TMSVYSSERHLILHGFLGGQSKNRTST 49
             M VY++ER L+L G +   +KN   T
Sbjct: 771  AMHVYANERRLVLSGLICNLNKNLNKT 797


>ref|XP_009340104.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Pyrus x bretschneideri]
            gi|694424665|ref|XP_009340105.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like [Pyrus x
            bretschneideri] gi|694424667|ref|XP_009340106.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like [Pyrus x bretschneideri]
          Length = 2264

 Score =  443 bits (1140), Expect = e-121
 Identities = 267/574 (46%), Positives = 345/574 (60%), Gaps = 18/574 (3%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S SS+  RD+S P TL++ S +N   D AS  L DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 267  SHSSSNNRDRS-PQTLYAASQRN---DPASAVL-DGEEPSVHFKWWYVVRLLQWHHAEGL 321

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+P+ II+WVL QLQ+K  L+  QL LPI++ ++E++ LSQTY R+LV +AVR+I E S 
Sbjct: 322  LLPTLIIEWVLSQLQDKELLEIMQLFLPIIYGVLETVVLSQTYVRNLVRVAVRFISEPS- 380

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCV--YLSDS-----VN 1210
             G S+LVD SR+AYI  ++VEMLRYLI+AVPDT V+LDC P+P  V  Y+S+        
Sbjct: 381  QGGSDLVDNSRRAYIVSSMVEMLRYLILAVPDTFVALDCFPLPSSVVSYVSNGGLPKMSE 440

Query: 1209 CSRRFFPSKVPASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVA 1030
              R+     V A   S    K  D   +  + D I+S I+K A+NLAKA  P   GH +A
Sbjct: 441  DERKI--KNVSAEVASALRSKVFDTQYQCLAFDRIVSCIQKCAENLAKAARPSYPGHSIA 498

Query: 1029 KALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSA 850
            KA+QALD++L+ GDVRGAY  LF ED  DG         WIA VSP LR+SL W  + + 
Sbjct: 499  KAVQALDRSLVQGDVRGAYRFLF-EDPCDGVASE----SWIAGVSPCLRTSLKWIGTANL 553

Query: 849  SLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKM----------- 703
            S +CS+FFLCEWATCDFRD RT+    + K +G  DFSQV++   LLK+           
Sbjct: 554  SFVCSVFFLCEWATCDFRDFRTAPPC-ELKFTGRKDFSQVFVVTRLLKLKIRDLQSSTQR 612

Query: 702  KNDYICSTSSLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVS 523
            KND +   SS                                      +A+GS       
Sbjct: 613  KNDSVLGVSS--------------------------------------VAKGSTQQNNFP 634

Query: 522  DGTVVVEDTFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQ 343
             G  +     S E KPKN  +  S  SS+ F+SPGP+HDI+VCWIDQH   K EG KRLQ
Sbjct: 635  VGVSLGN---SCEVKPKN-VDQRSMKSSNIFESPGPLHDIIVCWIDQHEAGKGEGLKRLQ 690

Query: 342  LLIVELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEE 163
            LL++ELI SGIF P AYVRQL+VSGIM+     ++ D+ KRH+++LK LPG  + +A EE
Sbjct: 691  LLLIELIRSGIFNPHAYVRQLIVSGIMDMNGPVVEVDRWKRHFRILKLLPGLLMHDALEE 750

Query: 162  AQGAFIPMSMETMSVYSSERHLILHGFLGGQSKN 61
            A  A  P   E M+ YS+ER LIL G L  Q+KN
Sbjct: 751  AGIAVGPQLSEAMNFYSTERRLILRGLLSNQNKN 784


>ref|XP_012083389.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Jatropha curcas]
          Length = 2266

 Score =  440 bits (1131), Expect = e-120
 Identities = 269/584 (46%), Positives = 358/584 (61%), Gaps = 10/584 (1%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+S P  L++GS+Q++     +    D E P +HFKWWY+VR++  H+AE L
Sbjct: 270  SHSAPHTRDRS-PQMLYAGSLQHRS--DPAVVFVDSEEPSLHFKWWYVVRLIHWHHAEGL 326

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+PS IIDWVL QLQEK  L+  QLLLPI++ ++++I LSQ+Y R+L  +AVRYI E S 
Sbjct: 327  LLPSVIIDWVLSQLQEKEMLEILQLLLPIIYGVLDTIILSQSYVRTLAVIAVRYIVELS- 385

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
            P  S+LVD SR+AY + AL+EMLRYLI+AVPDT V+LDC P+P  V LS +VN       
Sbjct: 386  PVGSDLVDNSRRAYTTSALIEMLRYLILAVPDTFVALDCFPLPQIV-LSYTVNDGAFALK 444

Query: 1188 SKVPASRK--------SLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGV 1033
            S   A +          +   K  DA  +  S + ++SSI+KRADNLAKA  PG   H V
Sbjct: 445  SSEEARKTIDNSAGAVGVLRNKGFDAQYQSFSFNKVVSSIQKRADNLAKAACPGYLVHSV 504

Query: 1032 AKALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVS 853
            AKA+QALDKAL  GD+R AYN LF E+  DG+  V E  GWI  VSP LRSSL W  +VS
Sbjct: 505  AKAVQALDKALSQGDIREAYNFLF-ENFCDGA--VDE--GWIEEVSPCLRSSLKWIGTVS 559

Query: 852  ASLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSS 673
             S ICS+FFLCEWATCD+RD R ++   D + SG  D SQVY+A+ LL++K   + S S 
Sbjct: 560  LSFICSVFFLCEWATCDYRDFR-AAPPNDVQFSGKKDVSQVYIASRLLRLKIRDMQSRS- 617

Query: 672  LFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGK--VSDGTVVVED 499
                                                  L++   ++G+  V +G     +
Sbjct: 618  --------------------------RRKNERSLGIKGLSQ-HNYVGRVPVGNGCENKGN 650

Query: 498  TFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELIL 319
            T +  +K +N         SD F+SPGP+HDI+VCWIDQH V+K EG KRLQLLIVELI 
Sbjct: 651  TKNGNRKIRNL--------SDIFESPGPLHDIIVCWIDQHEVQKGEGLKRLQLLIVELIQ 702

Query: 318  SGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPM 139
            SGIF P +YVRQL++SGIM+      D D++KRHYQ+LKQLPG  L +  EEA+      
Sbjct: 703  SGIFYPHSYVRQLIISGIMDASGPAGDLDRRKRHYQILKQLPGLFLHDILEEARIVEGSD 762

Query: 138  SMETMSVYSSERHLILHGFLGGQSKNRTSTDCVSSTEKDNRTSL 7
             +E M VYS+ER L+L G L  Q++N   ++ +   ++ + TS+
Sbjct: 763  LLEAMHVYSNERRLLLRGVLCEQNQNLCRSNILMRKQRHHPTSV 806


>ref|XP_008338849.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
            [Malus domestica] gi|658007346|ref|XP_008338850.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12 [Malus domestica]
            gi|658007348|ref|XP_008338851.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12 [Malus
            domestica]
          Length = 2257

 Score =  440 bits (1131), Expect = e-120
 Identities = 266/574 (46%), Positives = 346/574 (60%), Gaps = 18/574 (3%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S SS+  RD+S P TL++ S+  +  D AS  L DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSSSNNRDRS-PQTLYTASLPLRS-DPASAVL-DGEEPSVHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+P+ II+WVL QLQ+K  L+  QL LPI++ ++E++ LSQTY R+LV +AVR+I E S 
Sbjct: 326  LLPTLIIEWVLSQLQDKELLEIMQLFLPIIYGVLETVVLSQTYVRNLVRVAVRFIAEPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCV--YLSDS-----VN 1210
             G S+LVD SR+ YI  +LVEMLRYLI+AVPDT V+LDC P+P  V  Y+S         
Sbjct: 385  QGGSDLVDNSRRGYIVSSLVEMLRYLILAVPDTFVALDCFPLPSSVVSYVSKDGLPKISE 444

Query: 1209 CSRRFFPSKVPASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVA 1030
             +R+     V A   S    K  D   +  + D I+SSI+K A+NLAKA  P   GH +A
Sbjct: 445  DARKI--KNVSAEVASAVRSKVFDTQYQSLAFDRIVSSIQKCAENLAKAARPSYPGHSIA 502

Query: 1029 KALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSA 850
            KA+QALD++L+ GDVRGAY  LF ED  DG         WIA VSP LR+SL W  + + 
Sbjct: 503  KAVQALDRSLVQGDVRGAYRFLF-EDPCDGVASE----SWIAGVSPCLRTSLKWIGTANL 557

Query: 849  SLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKM----------- 703
            S +CS+FFLCEWATCDFRD RT+    + K +G  DFSQV++   LLK+           
Sbjct: 558  SFVCSVFFLCEWATCDFRDFRTAPPC-ELKFTGRKDFSQVFVVTRLLKLKIRDLQSSPHR 616

Query: 702  KNDYICSTSSLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVS 523
            KND +   SS                                      +A+GS       
Sbjct: 617  KNDSVLGVSS--------------------------------------VAKGSTQQNNFP 638

Query: 522  DGTVVVEDTFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQ 343
               V + +  S E KPKN  +  S  SS+ F+SPGP+HDI+VCWIDQH   K EG KRLQ
Sbjct: 639  VSRVSLGN--SCEVKPKN-VDQRSMKSSNIFESPGPLHDIIVCWIDQHEAGKGEGLKRLQ 695

Query: 342  LLIVELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEE 163
            LL++ELI  GIF P AYVRQL+VSGIM+     ++ D++KRH+++LK LPG  +R+A EE
Sbjct: 696  LLLIELIRCGIFNPHAYVRQLIVSGIMDMNGLVVEVDRRKRHFRILKLLPGLFMRDALEE 755

Query: 162  AQGAFIPMSMETMSVYSSERHLILHGFLGGQSKN 61
            A  A  P   E M+ Y +ER LIL G L  Q+KN
Sbjct: 756  AGIAEGPQLSEAMNFYITERRLILRGLLSDQNKN 789


>ref|XP_009367854.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Pyrus x bretschneideri]
            gi|694383850|ref|XP_009367855.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like [Pyrus x
            bretschneideri] gi|694383852|ref|XP_009367856.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like [Pyrus x bretschneideri]
          Length = 2268

 Score =  437 bits (1124), Expect = e-119
 Identities = 265/574 (46%), Positives = 345/574 (60%), Gaps = 18/574 (3%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S++  RD+S P  L++GS+  +G D AS  L DGEGP IHFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSTSHNRDRS-PQILYAGSLPQRG-DPASAVL-DGEGPSIHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            L+P+ II+WVL QLQEK  L+  QLLLPI++ ++E+I LSQTY R+LV +AVR+I E S 
Sbjct: 326  LLPTLIIEWVLSQLQEKELLEIMQLLLPIIYGVLETIVLSQTYVRNLVRVAVRFIGEPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVY-------LSDSVN 1210
             G S+ VD SR+ Y   +LVEMLRYLI+AVPDT V+ DC P+P  +        L     
Sbjct: 385  QGGSDHVDNSRRGYTVSSLVEMLRYLILAVPDTFVAFDCFPLPSSIVSYVANDGLPKMSE 444

Query: 1209 CSRRFFPSKVPASRKSLCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVA 1030
             +R+    KV A   S    K  D   +  + D+I+SSI+K A+NLAKA  P   GH +A
Sbjct: 445  DARKI--QKVSAEVASAFRSKVFDTQYQSLAFDHIVSSIQKHAENLAKAARPSYPGHSIA 502

Query: 1029 KALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSA 850
            KA+QALD++L+ GDVR A+  LF ED  DG         WIA VSP L++SL W  + + 
Sbjct: 503  KAVQALDRSLVQGDVRVAFRFLF-EDPCDGVANE----SWIAGVSPCLQTSLKWIGTANL 557

Query: 849  SLICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKM----------- 703
            S +C++FFLCEWATCDFRD  T++   + K +G  DFSQV++   LLK+           
Sbjct: 558  SFVCAVFFLCEWATCDFRDF-TTAPPCELKFTGRKDFSQVFVVTRLLKLKMRDLQLSPQR 616

Query: 702  KNDYICSTSSLFRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVS 523
            KND I   SS                                      LA+GS    + +
Sbjct: 617  KNDSIPGVSS--------------------------------------LAKGST---QQN 635

Query: 522  DGTVVVEDTFSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQ 343
            +  V V    S E KPKN  +  S  SS+ F+SPGP+HDI+VCWIDQH   K EG KRLQ
Sbjct: 636  NFPVRVSMGNSCEVKPKN-VDQRSMKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQ 694

Query: 342  LLIVELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEE 163
            LL++ELI SGIF P AYVRQL+VSGIM+   T  + D+  RH+++LK LP   + +A EE
Sbjct: 695  LLVIELIRSGIFNPHAYVRQLIVSGIMDTNGTGFEVDRWNRHFRILKLLPAHFMHDALEE 754

Query: 162  AQGAFIPMSMETMSVYSSERHLILHGFLGGQSKN 61
            A  A  P   E M+ YS+ER LIL G L  Q+KN
Sbjct: 755  AGAAEGPQLSEAMNFYSTERRLILRGLLSNQNKN 788


>ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus trichocarpa]
            gi|550345126|gb|EEE81860.2| CRYPTIC PRECOCIOUS family
            protein [Populus trichocarpa]
          Length = 2219

 Score =  436 bits (1121), Expect = e-119
 Identities = 270/570 (47%), Positives = 344/570 (60%), Gaps = 12/570 (2%)
 Frame = -3

Query: 1719 SAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERLLIP 1540
            SA      S   L++GSVQ++     S+A+ D E P +H K WY+ R+L  H+AE LL+P
Sbjct: 222  SAPHSKDRSQQMLYTGSVQHRS--DPSSAILDSEEPSLHLKLWYVARLLHWHHAEGLLLP 279

Query: 1539 SHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESLPGE 1360
            S IIDWVL QLQEK  L+  QLLLPI++ ++E++ LSQ++ R+LV +AVR+I E S PG 
Sbjct: 280  SVIIDWVLSQLQEKDLLEILQLLLPILYGVLETVILSQSFVRTLVGVAVRFIHEPS-PGG 338

Query: 1359 SNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFPSKV 1180
            S+LVD SR+AY + AL+EMLRYLI+AVPDT V+LDC P+PP V +S +VN    F     
Sbjct: 339  SDLVDNSRRAYTTSALIEMLRYLILAVPDTFVALDCFPLPPSV-VSYAVN-DGTFLSKAS 396

Query: 1179 PASRKS---------LCGGKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
              +RK+         +   K  DA  +  S D ++SSI+KRADNLAKAVS G   H VAK
Sbjct: 397  EDARKTKDNSAEVACVFRSKGLDAQYQSLSFDRVVSSIQKRADNLAKAVSSGYPVHSVAK 456

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            ALQALDKAL LGD+R AY  LF E+  +G+  V E   WI  VSP LRSSL W   VS S
Sbjct: 457  ALQALDKALSLGDIREAYGYLF-ENFCEGA--VHE--SWIKEVSPCLRSSLKWLRGVSLS 511

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLF 667
            LICS+F LCEWATCD+RD R S+   + K +G  DFSQVY+A+ LLK K   I    S F
Sbjct: 512  LICSVFLLCEWATCDYRDFR-SAPPHELKFTGRKDFSQVYIASRLLKSK---IRDLQSPF 567

Query: 666  RCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEG---SRHLGKVSDGTVVVEDT 496
            R                                  SL +G   S + G++  G       
Sbjct: 568  R------------------------RKNEKSPGVNSLVKGLNQSNYFGRIPVGNGY---- 599

Query: 495  FSSEKKPKNFYEGSSTGSSDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLIVELILS 316
                K       G  T  S+ F+SPGP+HDI VCWIDQH V   EG KRLQLLIVELI S
Sbjct: 600  --EIKSNSKTVSGQGTNMSNIFESPGPLHDITVCWIDQHEVCNVEGLKRLQLLIVELIHS 657

Query: 315  GIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQGAFIPMS 136
            GIF PQ YVRQL++SGIM+    P D D++KRHY+VLKQLPG  + +  E+A+ A     
Sbjct: 658  GIFSPQVYVRQLIISGIMDAAGPPADLDRRKRHYRVLKQLPGRFVHDVLEDARIAEGSEL 717

Query: 135  METMSVYSSERHLILHGFLGGQSKNRTSTD 46
             E M +YS+ER L+LHG    + +N   ++
Sbjct: 718  SEAMRIYSNERRLLLHGLFCERYQNSVKSN 747


>gb|KJB38933.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
          Length = 2110

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/561 (45%), Positives = 345/561 (61%), Gaps = 15/561 (2%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+  P   ++GS+Q++     + A+ DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSTQHGRDRL-PQIHYAGSLQHRS--DLAPAVIDGEEPSLHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDWVL QLQEK  L+  QLLLPI++ ++E+I L QTY R+LV +A+R+I E S 
Sbjct: 326  VLPSLIIDWVLNQLQEKDLLEILQLLLPIIYGVLETIILCQTYVRNLVGVAIRFIREPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
            PG S+LVD SR+AY   ALVEMLRYLI A PDT V+LDC P+P CV LS + +       
Sbjct: 385  PGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCV-LSHTPSDGGFLSK 443

Query: 1188 SKVPASRKSLCG------GKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
                A++K+         GK  D+  +  S ++++S+++KRADNLAK  + G     VAK
Sbjct: 444  PSDDAAKKNYTADAYAVRGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPSQSVAK 503

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+Q LDKAL+ GDV  AY  +F  DL+DG+  VGE  GW+A VSPSLRSSL W  +V+ S
Sbjct: 504  AVQTLDKALLQGDVIDAYKHIF-NDLYDGA--VGE--GWVAEVSPSLRSSLKWLQTVNLS 558

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLF 667
            LICS+FFLCEWATCD+RD RT+  S D K +G+ DFSQ+YLA  LLK+K   +       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPS-DVKFTGSKDFSQIYLAIQLLKLKMKEL------- 610

Query: 666  RCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSS 487
                                                  +     G+ S      ++++SS
Sbjct: 611  --------------------------------------QKKLKKGRASRKNTSQQNSYSS 632

Query: 486  EKKPKNFYEGSSTGS---------SDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLI 334
            +    + +E  S G          SD F SPGP+HDI+VCWIDQH   K EG KRLQL +
Sbjct: 633  KDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFM 692

Query: 333  VELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQG 154
            +ELI SGIF PQAYVRQLLVSGI++      D +++KRH ++LKQLPG+ +  A EEA+ 
Sbjct: 693  LELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRHQRILKQLPGQFMLNALEEARI 752

Query: 153  AFIPMSMETMSVYSSERHLIL 91
            A     +E ++VYS+ER L+L
Sbjct: 753  AEGSELLEAINVYSNERLLVL 773


>gb|KJB38928.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
          Length = 2231

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/561 (45%), Positives = 345/561 (61%), Gaps = 15/561 (2%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+  P   ++GS+Q++     + A+ DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSTQHGRDRL-PQIHYAGSLQHRS--DLAPAVIDGEEPSLHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDWVL QLQEK  L+  QLLLPI++ ++E+I L QTY R+LV +A+R+I E S 
Sbjct: 326  VLPSLIIDWVLNQLQEKDLLEILQLLLPIIYGVLETIILCQTYVRNLVGVAIRFIREPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
            PG S+LVD SR+AY   ALVEMLRYLI A PDT V+LDC P+P CV LS + +       
Sbjct: 385  PGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCV-LSHTPSDGGFLSK 443

Query: 1188 SKVPASRKSLCG------GKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
                A++K+         GK  D+  +  S ++++S+++KRADNLAK  + G     VAK
Sbjct: 444  PSDDAAKKNYTADAYAVRGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPSQSVAK 503

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+Q LDKAL+ GDV  AY  +F  DL+DG+  VGE  GW+A VSPSLRSSL W  +V+ S
Sbjct: 504  AVQTLDKALLQGDVIDAYKHIF-NDLYDGA--VGE--GWVAEVSPSLRSSLKWLQTVNLS 558

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLF 667
            LICS+FFLCEWATCD+RD RT+  S D K +G+ DFSQ+YLA  LLK+K   +       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPS-DVKFTGSKDFSQIYLAIQLLKLKMKEL------- 610

Query: 666  RCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSS 487
                                                  +     G+ S      ++++SS
Sbjct: 611  --------------------------------------QKKLKKGRASRKNTSQQNSYSS 632

Query: 486  EKKPKNFYEGSSTGS---------SDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLI 334
            +    + +E  S G          SD F SPGP+HDI+VCWIDQH   K EG KRLQL +
Sbjct: 633  KDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFM 692

Query: 333  VELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQG 154
            +ELI SGIF PQAYVRQLLVSGI++      D +++KRH ++LKQLPG+ +  A EEA+ 
Sbjct: 693  LELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRHQRILKQLPGQFMLNALEEARI 752

Query: 153  AFIPMSMETMSVYSSERHLIL 91
            A     +E ++VYS+ER L+L
Sbjct: 753  AEGSELLEAINVYSNERLLVL 773


>gb|KJB38926.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
            gi|763771804|gb|KJB38927.1| hypothetical protein
            B456_007G099500 [Gossypium raimondii]
            gi|763771809|gb|KJB38932.1| hypothetical protein
            B456_007G099500 [Gossypium raimondii]
          Length = 2220

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/561 (45%), Positives = 345/561 (61%), Gaps = 15/561 (2%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+  P   ++GS+Q++     + A+ DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSTQHGRDRL-PQIHYAGSLQHRS--DLAPAVIDGEEPSLHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDWVL QLQEK  L+  QLLLPI++ ++E+I L QTY R+LV +A+R+I E S 
Sbjct: 326  VLPSLIIDWVLNQLQEKDLLEILQLLLPIIYGVLETIILCQTYVRNLVGVAIRFIREPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
            PG S+LVD SR+AY   ALVEMLRYLI A PDT V+LDC P+P CV LS + +       
Sbjct: 385  PGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCV-LSHTPSDGGFLSK 443

Query: 1188 SKVPASRKSLCG------GKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
                A++K+         GK  D+  +  S ++++S+++KRADNLAK  + G     VAK
Sbjct: 444  PSDDAAKKNYTADAYAVRGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPSQSVAK 503

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+Q LDKAL+ GDV  AY  +F  DL+DG+  VGE  GW+A VSPSLRSSL W  +V+ S
Sbjct: 504  AVQTLDKALLQGDVIDAYKHIF-NDLYDGA--VGE--GWVAEVSPSLRSSLKWLQTVNLS 558

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLF 667
            LICS+FFLCEWATCD+RD RT+  S D K +G+ DFSQ+YLA  LLK+K   +       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPS-DVKFTGSKDFSQIYLAIQLLKLKMKEL------- 610

Query: 666  RCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSS 487
                                                  +     G+ S      ++++SS
Sbjct: 611  --------------------------------------QKKLKKGRASRKNTSQQNSYSS 632

Query: 486  EKKPKNFYEGSSTGS---------SDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLI 334
            +    + +E  S G          SD F SPGP+HDI+VCWIDQH   K EG KRLQL +
Sbjct: 633  KDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFM 692

Query: 333  VELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQG 154
            +ELI SGIF PQAYVRQLLVSGI++      D +++KRH ++LKQLPG+ +  A EEA+ 
Sbjct: 693  LELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRHQRILKQLPGQFMLNALEEARI 752

Query: 153  AFIPMSMETMSVYSSERHLIL 91
            A     +E ++VYS+ER L+L
Sbjct: 753  AEGSELLEAINVYSNERLLVL 773


>ref|XP_012489946.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Gossypium raimondii] gi|763771802|gb|KJB38925.1|
            hypothetical protein B456_007G099500 [Gossypium
            raimondii] gi|763771806|gb|KJB38929.1| hypothetical
            protein B456_007G099500 [Gossypium raimondii]
            gi|763771807|gb|KJB38930.1| hypothetical protein
            B456_007G099500 [Gossypium raimondii]
          Length = 2246

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/561 (45%), Positives = 345/561 (61%), Gaps = 15/561 (2%)
 Frame = -3

Query: 1728 SFSSAQRRDQSSPNTLFSGSVQNKGGDSASTALPDGEGPPIHFKWWYMVRILQSHNAERL 1549
            S S+   RD+  P   ++GS+Q++     + A+ DGE P +HFKWWY+VR+LQ H+AE L
Sbjct: 269  SHSTQHGRDRL-PQIHYAGSLQHRS--DLAPAVIDGEEPSLHFKWWYVVRLLQWHHAEGL 325

Query: 1548 LIPSHIIDWVLLQLQEKVSLDTFQLLLPIVFSIIESIALSQTYARSLVELAVRYIPEESL 1369
            ++PS IIDWVL QLQEK  L+  QLLLPI++ ++E+I L QTY R+LV +A+R+I E S 
Sbjct: 326  VLPSLIIDWVLNQLQEKDLLEILQLLLPIIYGVLETIILCQTYVRNLVGVAIRFIREPS- 384

Query: 1368 PGESNLVDGSRKAYISCALVEMLRYLIVAVPDTIVSLDCVPIPPCVYLSDSVNCSRRFFP 1189
            PG S+LVD SR+AY   ALVEMLRYLI A PDT V+LDC P+P CV LS + +       
Sbjct: 385  PGGSDLVDNSRRAYTISALVEMLRYLIQATPDTFVALDCFPLPTCV-LSHTPSDGGFLSK 443

Query: 1188 SKVPASRKSLCG------GKERDAHSRFSSVDNILSSIKKRADNLAKAVSPGVQGHGVAK 1027
                A++K+         GK  D+  +  S ++++S+++KRADNLAK  + G     VAK
Sbjct: 444  PSDDAAKKNYTADAYAVRGKGFDSQYQSLSFNHVVSTVEKRADNLAKGATAGYPSQSVAK 503

Query: 1026 ALQALDKALILGDVRGAYNVLFVEDLFDGSEGVGEGCGWIAAVSPSLRSSLTWFSSVSAS 847
            A+Q LDKAL+ GDV  AY  +F  DL+DG+  VGE  GW+A VSPSLRSSL W  +V+ S
Sbjct: 504  AVQTLDKALLQGDVIDAYKHIF-NDLYDGA--VGE--GWVAEVSPSLRSSLKWLQTVNLS 558

Query: 846  LICSIFFLCEWATCDFRDCRTSSVSRDTKLSGTHDFSQVYLAALLLKMKNDYICSTSSLF 667
            LICS+FFLCEWATCD+RD RT+  S D K +G+ DFSQ+YLA  LLK+K   +       
Sbjct: 559  LICSVFFLCEWATCDYRDFRTAPPS-DVKFTGSKDFSQIYLAIQLLKLKMKEL------- 610

Query: 666  RCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEGSRHLGKVSDGTVVVEDTFSS 487
                                                  +     G+ S      ++++SS
Sbjct: 611  --------------------------------------QKKLKKGRASRKNTSQQNSYSS 632

Query: 486  EKKPKNFYEGSSTGS---------SDCFQSPGPVHDILVCWIDQHSVEKSEGCKRLQLLI 334
            +    + +E  S G          SD F SPGP+HDI+VCWIDQH   K EG KRLQL +
Sbjct: 633  KDLLGDTHEAKSNGKGLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFM 692

Query: 333  VELILSGIFRPQAYVRQLLVSGIMNKGETPLDSDKQKRHYQVLKQLPGECLREASEEAQG 154
            +ELI SGIF PQAYVRQLLVSGI++      D +++KRH ++LKQLPG+ +  A EEA+ 
Sbjct: 693  LELIRSGIFYPQAYVRQLLVSGIIDTNGPMADLNRRKRHQRILKQLPGQFMLNALEEARI 752

Query: 153  AFIPMSMETMSVYSSERHLIL 91
            A     +E ++VYS+ER L+L
Sbjct: 753  AEGSELLEAINVYSNERLLVL 773