BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00000874
         (954 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated prot...   300   8e-79
ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated prot...   300   8e-79
ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily pr...   297   7e-78
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   297   7e-78
ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfam...   289   3e-75
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   289   3e-75
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   289   3e-75
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot...   288   4e-75
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   288   4e-75
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr...   288   6e-75
gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]    287   7e-75
gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   287   7e-75
gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   287   7e-75
gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   287   7e-75
ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated prot...   287   1e-74
ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated prot...   287   1e-74
ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated prot...   286   1e-74
ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated prot...   285   3e-74
ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated prot...   285   4e-74
ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated prot...   285   4e-74

>ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Nelumbo nucifera]
          Length = 484

 Score =  300 bits (769), Expect = 8e-79
 Identities = 170/295 (57%), Positives = 205/295 (69%), Gaps = 4/295 (1%)
 Frame = +2

Query: 80  PGDNGKRV--SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFN 253
           PG     V  S  S  +F +SRN D + ++SSS L+ E+SPDA SEKELGNEYFKQKKFN
Sbjct: 88  PGGESPSVHYSRNSKYRFDFSRNFDAVNKLSSSYLNAEDSPDATSEKELGNEYFKQKKFN 147

Query: 254 EAIDCYSRSIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATAR 433
           EAIDCYSRSIAL P+AVAYANRAMAYL+IKRFEEAE+DCTEALNLDDRYIKAYSRRATAR
Sbjct: 148 EAIDCYSRSIALMPTAVAYANRAMAYLKIKRFEEAEDDCTEALNLDDRYIKAYSRRATAR 207

Query: 434 KELRKLKESIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRV 613
           KEL KLK +IED+EFALRLEP NQE+KKQ+A+ K LY KE+LKKAS   AR++ Q     
Sbjct: 208 KELGKLKAAIEDAEFALRLEPNNQELKKQYAESKALYDKEILKKAS-GIARNAIQGETAA 266

Query: 614 GVTEIQTGHTKVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGG--KALKVNPQGV 787
            V  ++    K   KPS +    K+   +   G  S   +S G  E    K+     +G 
Sbjct: 267 QVDRMKGTDGKFPSKPSIIVQEIKSK--TTVGGTRSWIKESDGSQEDATLKSSADTFKGS 324

Query: 788 QSLDKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
            ++DK+ E KT+VQEL             KN++PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 325 HAVDKREELKTSVQELASRAASRAMAEAVKNITPPKSAYEFEVSWRGLSGDRALQ 379


>ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Nelumbo nucifera]
          Length = 489

 Score =  300 bits (769), Expect = 8e-79
 Identities = 170/295 (57%), Positives = 205/295 (69%), Gaps = 4/295 (1%)
 Frame = +2

Query: 80  PGDNGKRV--SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFN 253
           PG     V  S  S  +F +SRN D + ++SSS L+ E+SPDA SEKELGNEYFKQKKFN
Sbjct: 93  PGGESPSVHYSRNSKYRFDFSRNFDAVNKLSSSYLNAEDSPDATSEKELGNEYFKQKKFN 152

Query: 254 EAIDCYSRSIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATAR 433
           EAIDCYSRSIAL P+AVAYANRAMAYL+IKRFEEAE+DCTEALNLDDRYIKAYSRRATAR
Sbjct: 153 EAIDCYSRSIALMPTAVAYANRAMAYLKIKRFEEAEDDCTEALNLDDRYIKAYSRRATAR 212

Query: 434 KELRKLKESIEDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRV 613
           KEL KLK +IED+EFALRLEP NQE+KKQ+A+ K LY KE+LKKAS   AR++ Q     
Sbjct: 213 KELGKLKAAIEDAEFALRLEPNNQELKKQYAESKALYDKEILKKAS-GIARNAIQGETAA 271

Query: 614 GVTEIQTGHTKVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGG--KALKVNPQGV 787
            V  ++    K   KPS +    K+   +   G  S   +S G  E    K+     +G 
Sbjct: 272 QVDRMKGTDGKFPSKPSIIVQEIKSK--TTVGGTRSWIKESDGSQEDATLKSSADTFKGS 329

Query: 788 QSLDKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
            ++DK+ E KT+VQEL             KN++PPK+AY+FEVSW+GLSGD ALQ
Sbjct: 330 HAVDKREELKTSVQELASRAASRAMAEAVKNITPPKSAYEFEVSWRGLSGDRALQ 384


>ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           3, partial [Theobroma cacao] gi|508719765|gb|EOY11662.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 3, partial [Theobroma cacao]
          Length = 412

 Score =  297 bits (761), Expect = 7e-78
 Identities = 171/306 (55%), Positives = 202/306 (66%), Gaps = 23/306 (7%)
 Frame = +2

Query: 104 SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 283
           S TS+ Q+ Y +N D    +SSS + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 29  STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 88

Query: 284 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESI 463
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESI
Sbjct: 89  GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 148

Query: 464 EDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEI----- 628
           ED+EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E      
Sbjct: 149 EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSETKENGL 207

Query: 629 ----------QTGHTKVGG---KPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALK 769
                     +TG   V G   K S+     K  + SV S  I  +    G  + G  L 
Sbjct: 208 GMHSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAGSRKDGTQLD 267

Query: 770 VNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLS 934
               G++S+ K     K E K +VQEL             KN+SPP TAYQFEVSW+ LS
Sbjct: 268 SGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALS 327

Query: 935 GDPALQ 952
           GD ALQ
Sbjct: 328 GDRALQ 333


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  297 bits (761), Expect = 7e-78
 Identities = 171/306 (55%), Positives = 202/306 (66%), Gaps = 23/306 (7%)
 Frame = +2

Query: 104 SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 283
           S TS+ Q+ Y +N D    +SSS + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 61  STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 120

Query: 284 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESI 463
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESI
Sbjct: 121 GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 180

Query: 464 EDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEI----- 628
           ED+EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E      
Sbjct: 181 EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSETKENGL 239

Query: 629 ----------QTGHTKVGG---KPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALK 769
                     +TG   V G   K S+     K  + SV S  I  +    G  + G  L 
Sbjct: 240 GMHSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAGSRKDGTQLD 299

Query: 770 VNPQGVQSLDK-----KREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLS 934
               G++S+ K     K E K +VQEL             KN+SPP TAYQFEVSW+ LS
Sbjct: 300 SGIVGLESIKKNNRTRKPELKASVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALS 359

Query: 935 GDPALQ 952
           GD ALQ
Sbjct: 360 GDRALQ 365


>ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 5 [Theobroma cacao] gi|508719767|gb|EOY11664.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 5 [Theobroma cacao]
          Length = 389

 Score =  289 bits (739), Expect = 3e-75
 Identities = 165/283 (58%), Positives = 192/283 (67%)
 Frame = +2

Query: 104 SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 283
           S TS+ Q+ Y +N D    +SSS + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 29  STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 88

Query: 284 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESI 463
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESI
Sbjct: 89  GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 148

Query: 464 EDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHT 643
           ED+EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     T
Sbjct: 149 EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----T 202

Query: 644 KVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTA 823
           K  G      S S T R  VA+       Q Y   +  +             +K E K +
Sbjct: 203 KENGLGMHSASNS-TQRTGVAT------VQGYQTKKNNRT------------RKPELKAS 243

Query: 824 VQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
           VQEL             KN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 244 VQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 286


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  289 bits (739), Expect = 3e-75
 Identities = 165/283 (58%), Positives = 192/283 (67%)
 Frame = +2

Query: 104 SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 283
           S TS+ Q+ Y +N D    +SSS + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 61  STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 120

Query: 284 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESI 463
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESI
Sbjct: 121 GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 180

Query: 464 EDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHT 643
           ED+EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     T
Sbjct: 181 EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----T 234

Query: 644 KVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTA 823
           K  G      S S T R  VA+       Q Y   +  +             +K E K +
Sbjct: 235 KENGLGMHSASNS-TQRTGVAT------VQGYQTKKNNRT------------RKPELKAS 275

Query: 824 VQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
           VQEL             KN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 276 VQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 318


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  289 bits (739), Expect = 3e-75
 Identities = 165/283 (58%), Positives = 192/283 (67%)
 Frame = +2

Query: 104 SMTSANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 283
           S TS+ Q+ Y +N D    +SSS + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 62  STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 121

Query: 284 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESI 463
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESI
Sbjct: 122 GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 181

Query: 464 EDSEFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHT 643
           ED+EFALRLEP NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     T
Sbjct: 182 EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----T 235

Query: 644 KVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQKTA 823
           K  G      S S T R  VA+       Q Y   +  +             +K E K +
Sbjct: 236 KENGLGMHSASNS-TQRTGVAT------VQGYQTKKNNRT------------RKPELKAS 276

Query: 824 VQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
           VQEL             KN+SPP TAYQFEVSW+ LSGD ALQ
Sbjct: 277 VQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQ 319


>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
           sinensis]
          Length = 438

 Score =  288 bits (737), Expect = 4e-75
 Identities = 170/335 (50%), Positives = 216/335 (64%), Gaps = 18/335 (5%)
 Frame = +2

Query: 2   GMLSDLQGWXXXXXXXXXXXXAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPITRIS 166
           G L+DLQ W             ++ S  DN    S+ SA +       YSRN DP++ IS
Sbjct: 14  GFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSYSRNYDPVSHIS 72

Query: 167 SSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKR 346
           SSL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+++R
Sbjct: 73  SSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRR 132

Query: 347 FEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHA 526
           F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP+NQE+KKQ A
Sbjct: 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192

Query: 527 DVKGLYKKEVLKKAS-------AAAARDSTQEAKRVGVTEIQTGHTKVGGKPSDVGSGSK 685
           +VK LY+KEV +KAS        +  + +  E + V  T  +TG  ++     D+    K
Sbjct: 193 EVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTTQKTGVAEI----QDLTISKK 248

Query: 686 TARISVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQELXXXX 847
           T      + N+  + ++ G  +G  A   N   +  LDK+  +        +VQEL    
Sbjct: 249 T-----ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQELATRA 300

Query: 848 XXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                    KN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 301 TSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
            gi|550337753|gb|ERP60190.1| hypothetical protein
            POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  288 bits (737), Expect = 4e-75
 Identities = 176/349 (50%), Positives = 213/349 (61%), Gaps = 32/349 (9%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSP---GDNGKRVSMTSA--------NQFGYSRNSD 148
            G L+DLQ W                S    G++G+    TSA         Q+ YSRN  
Sbjct: 18   GFLNDLQDWELLKDTDKKMKKKSRASDVKIGEDGRSEGKTSAADSSRSGSGQYEYSRNFG 77

Query: 149  PITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMA 328
             I R+SSS   DE + DA +EKELGNEYFKQKKFNEAI+CYSRSIALSP+AVAYANRAMA
Sbjct: 78   AINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMA 137

Query: 329  YLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQE 508
            YL+IKRF EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFAL+LEP NQE
Sbjct: 138  YLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALKLEPNNQE 197

Query: 509  VKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE------------IQTGHTKVG 652
            +KKQ+A+VK LY+KE+L+KAS    R S Q  ++ G +E            I T  T V 
Sbjct: 198  IKKQYAEVKSLYEKEILQKAS-GTLRSSLQGTQQGGRSEASVNGHAVHPVSIATQKTGVS 256

Query: 653  GKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNP-QGVQSLDK-----K 805
                D      G+   + SV    + ++ +S G           P   V+S+ K     +
Sbjct: 257  ASKKDNTKENDGNNLVKKSVHVKELRNRSKSDGHVGNDSPANATPSSSVESVQKNNRTRR 316

Query: 806  REQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
            +E KT+V EL             KN++PP +AYQFEVSW+G SGD ALQ
Sbjct: 317  QELKTSVIELASQAASRAMAEAAKNITPPNSAYQFEVSWQGFSGDRALQ 365


>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
            gi|557535662|gb|ESR46780.1| hypothetical protein
            CICLE_v10003914mg [Citrus clementina]
          Length = 977

 Score =  288 bits (736), Expect = 6e-75
 Identities = 170/331 (51%), Positives = 213/331 (64%), Gaps = 14/331 (4%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPITRIS 166
            G L+DLQ W             ++ S  DN    S+ S  +       YSRN DP++RIS
Sbjct: 553  GFLNDLQDWDLSLHEKDKKMKHKASSK-DNLVSSSLKSGEKPSPSGNSYSRNYDPVSRIS 611

Query: 167  SSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKR 346
            SSL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+++R
Sbjct: 612  SSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRR 671

Query: 347  FEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHA 526
            F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP+NQE+KKQ A
Sbjct: 672  FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 731

Query: 527  DVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSDVGSGSKTARI 697
            +VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D+    KT   
Sbjct: 732  EVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQDLTISKKT--- 788

Query: 698  SVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQELXXXXXXXX 859
               + N+  + ++ G  +G  A   N   +  LDK+  +        +VQEL        
Sbjct: 789  --ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQELATRATSRA 843

Query: 860  XXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                 KN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 844  VAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 874


>gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]
          Length = 472

 Score =  287 bits (735), Expect = 7e-75
 Identities = 173/362 (47%), Positives = 213/362 (58%), Gaps = 45/362 (12%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSPGDN-----------GKRV-----SMTSANQFGY 133
            G L+DLQ W              S + G             GKR      S TS+ Q+ Y
Sbjct: 15   GFLNDLQDWELSLKDKGKNKKMTSQASGKEQLNITEKGRPTGKRSLNSSSSTTSSEQYDY 74

Query: 134  SRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYA 313
             +N D  + +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSP+AVAYA
Sbjct: 75   LKNYDKWSNLSTSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAYA 134

Query: 314  NRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLE 493
            NRAMAYL+I++F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIED+EF LRLE
Sbjct: 135  NRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFGLRLE 194

Query: 494  PENQEVKKQHADVKGLYKKEVLKKASAAAAR------------------------DSTQE 601
            P +Q++KKQHA+ K LY+KE+L+KAS    +                        DSTQ 
Sbjct: 195  PNSQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEVGKSATIDNGLGMHTMSDSTQ- 253

Query: 602  AKRVGVTEIQTGHTKVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQ 781
              R G+   Q   TKV    S++    K  + SV    I  +  S G +  G  L V   
Sbjct: 254  --RKGIAAAQGSQTKV----SEIDKQKKPEKGSVTLEEIGKRNTSAGNTADGTQLDVEIA 307

Query: 782  GVQSL-----DKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPA 946
            G +++      +K+E K +VQ+L             KN+SPP TAYQFEVSW+ LSGD  
Sbjct: 308  GPENIKRNTKTRKQELKASVQDLAFRAASRAMAEAAKNISPPNTAYQFEVSWRALSGDRL 367

Query: 947  LQ 952
            LQ
Sbjct: 368  LQ 369


>gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 431

 Score =  287 bits (735), Expect = 7e-75
 Identities = 170/331 (51%), Positives = 213/331 (64%), Gaps = 14/331 (4%)
 Frame = +2

Query: 2   GMLSDLQGWXXXXXXXXXXXXAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPITRIS 166
           G L+DLQ W             ++ S  DN    S+ SA +       YSRN DP++ IS
Sbjct: 7   GFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSYSRNYDPVSHIS 65

Query: 167 SSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKR 346
           SSL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+++R
Sbjct: 66  SSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRR 125

Query: 347 FEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHA 526
           F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP+NQE+KKQ A
Sbjct: 126 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 185

Query: 527 DVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSDVGSGSKTARI 697
           +VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D+    KT   
Sbjct: 186 EVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQDLTISKKT--- 242

Query: 698 SVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQELXXXXXXXX 859
              + N+  + ++ G  +G  A   N   +  LDK+  +        +VQEL        
Sbjct: 243 --ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQELATRATSRA 297

Query: 860 XXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                KN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 298 VAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 328


>gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 372

 Score =  287 bits (735), Expect = 7e-75
 Identities = 170/331 (51%), Positives = 213/331 (64%), Gaps = 14/331 (4%)
 Frame = +2

Query: 2   GMLSDLQGWXXXXXXXXXXXXAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPITRIS 166
           G L+DLQ W             ++ S  DN    S+ SA +       YSRN DP++ IS
Sbjct: 14  GFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSYSRNYDPVSHIS 72

Query: 167 SSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKR 346
           SSL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+++R
Sbjct: 73  SSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRR 132

Query: 347 FEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHA 526
           F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP+NQE+KKQ A
Sbjct: 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192

Query: 527 DVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSDVGSGSKTARI 697
           +VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D+    KT   
Sbjct: 193 EVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQDLTISKKT--- 249

Query: 698 SVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQELXXXXXXXX 859
              + N+  + ++ G  +G  A   N   +  LDK+  +        +VQEL        
Sbjct: 250 --ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQELATRATSRA 304

Query: 860 XXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                KN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 305 VAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 438

 Score =  287 bits (735), Expect = 7e-75
 Identities = 170/331 (51%), Positives = 213/331 (64%), Gaps = 14/331 (4%)
 Frame = +2

Query: 2   GMLSDLQGWXXXXXXXXXXXXAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPITRIS 166
           G L+DLQ W             ++ S  DN    S+ SA +       YSRN DP++ IS
Sbjct: 14  GFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSYSRNYDPVSHIS 72

Query: 167 SSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKR 346
           SSL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+++R
Sbjct: 73  SSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRR 132

Query: 347 FEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEVKKQHA 526
           F+EAE+DCTEALNLDDRYIKAYSRRATARKEL KLKESIEDSEFALRLEP+NQE+KKQ A
Sbjct: 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192

Query: 527 DVKGLYKKEVLKKASAAAARDSTQEAKRVG--VTEIQTGHTKVG-GKPSDVGSGSKTARI 697
           +VK LY+KEV +KAS    +      K  G  V  ++    K G  +  D+    KT   
Sbjct: 193 EVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQDLTISKKT--- 249

Query: 698 SVASGNISSKPQSYGPSEGGKALKVNPQGVQSLDKKREQ------KTAVQELXXXXXXXX 859
              + N+  + ++ G  +G  A   N   +  LDK+  +        +VQEL        
Sbjct: 250 --ENKNLRDESKTEGQRDGSGA---NATHISGLDKRNHRTKKAVLDASVQELATRATSRA 304

Query: 860 XXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                KN++PPK+AY+FEVSW+G +GD ALQ
Sbjct: 305 VAEAAKNITPPKSAYEFEVSWRGFAGDHALQ 335


>ref|XP_011038926.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
            [Populus euphratica]
          Length = 472

 Score =  287 bits (734), Expect = 1e-74
 Identities = 175/353 (49%), Positives = 212/353 (60%), Gaps = 36/353 (10%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSP--GDNGKRVSMTSA--------NQFGYSRNSDP 151
            G L+DLQ W                S   G++G+    TSA         Q+ YSRN   
Sbjct: 18   GFLNDLQDWELLKDTDKKVKTKSQASDKIGEDGRSKGKTSAVDSSRSGSGQYDYSRNFGA 77

Query: 152  ITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAY 331
            I R+SS+   DE + DA +EKELGNEYFKQKKFNEAI+CYSRSIALSP+AVAYANRAMAY
Sbjct: 78   INRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAY 137

Query: 332  LRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEV 511
            L+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKESIEDSEFAL+LEP NQE+
Sbjct: 138  LKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKESIEDSEFALKLEPINQEI 197

Query: 512  KKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE------------IQTGHTKVGG 655
            KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E            I T +T V  
Sbjct: 198  KKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVNGHAVHPVSIPTQNTGVSA 256

Query: 656  KPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNP------QGVQSLDK-- 802
               D      G+   + SV    + +K    G    G     +P        V S+ K  
Sbjct: 257  SKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKNN 316

Query: 803  ---KREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
               ++E KT+V EL             KN++PP +AYQFEVSW+G SGD ALQ
Sbjct: 317  RTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRGFSGDRALQ 369


>ref|XP_011038925.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
            [Populus euphratica]
          Length = 472

 Score =  287 bits (734), Expect = 1e-74
 Identities = 175/353 (49%), Positives = 212/353 (60%), Gaps = 36/353 (10%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSP--GDNGKRVSMTSA--------NQFGYSRNSDP 151
            G L+DLQ W                S   G++G+    TSA         Q+ YSRN   
Sbjct: 18   GFLNDLQDWELLKDTDKKVKTKSQASDVIGEDGRSKGKTSAVDSSRSGSGQYDYSRNFGA 77

Query: 152  ITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAY 331
            I R+SS+   DE + DA +EKELGNEYFKQKKFNEAI+CYSRSIALSP+AVAYANRAMAY
Sbjct: 78   INRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMAY 137

Query: 332  LRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQEV 511
            L+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKESIEDSEFAL+LEP NQE+
Sbjct: 138  LKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKESIEDSEFALKLEPINQEI 197

Query: 512  KKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE------------IQTGHTKVGG 655
            KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E            I T +T V  
Sbjct: 198  KKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVNGHAVHPVSIPTQNTGVSA 256

Query: 656  KPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNP------QGVQSLDK-- 802
               D      G+   + SV    + +K    G    G     +P        V S+ K  
Sbjct: 257  SKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKNN 316

Query: 803  ---KREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
               ++E KT+V EL             KN++PP +AYQFEVSW+G SGD ALQ
Sbjct: 317  RTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRGFSGDRALQ 369


>ref|XP_011038924.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
            [Populus euphratica]
          Length = 473

 Score =  286 bits (733), Expect = 1e-74
 Identities = 175/354 (49%), Positives = 212/354 (59%), Gaps = 37/354 (10%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSP---GDNGKRVSMTSA--------NQFGYSRNSD 148
            G L+DLQ W                S    G++G+    TSA         Q+ YSRN  
Sbjct: 18   GFLNDLQDWELLKDTDKKVKTKSQASDVKIGEDGRSKGKTSAVDSSRSGSGQYDYSRNFG 77

Query: 149  PITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMA 328
             I R+SS+   DE + DA +EKELGNEYFKQKKFNEAI+CYSRSIALSP+AVAYANRAMA
Sbjct: 78   AINRLSSNFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAYANRAMA 137

Query: 329  YLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLEPENQE 508
            YL+IKRF EAE+DCTE LNLDD YIKAYSRRATARKEL KLKESIEDSEFAL+LEP NQE
Sbjct: 138  YLKIKRFREAEDDCTETLNLDDHYIKAYSRRATARKELGKLKESIEDSEFALKLEPINQE 197

Query: 509  VKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTE------------IQTGHTKVG 652
            +KKQ+A+VK LY+KE+L+KAS  A R S Q  ++ G +E            I T +T V 
Sbjct: 198  IKKQYAEVKSLYEKEILQKAS-GALRSSLQGTQKGGRSEASVNGHAVHPVSIPTQNTGVS 256

Query: 653  GKPSD---VGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNP------QGVQSLDK- 802
                D      G+   + SV    + +K    G    G     +P        V S+ K 
Sbjct: 257  ASKKDNTKENDGNNLVKKSVRVKEVRNKGTGAGSKSDGHVGNDSPANATLSSSVDSVQKN 316

Query: 803  ----KREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
                ++E KT+V EL             KN++PP +AYQFEVSW+G SGD ALQ
Sbjct: 317  NRTQRQELKTSVMELASQAASRAMAEAAKNITPPNSAYQFEVSWRGFSGDRALQ 370


>ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Gossypium raimondii] gi|763778334|gb|KJB45457.1|
            hypothetical protein B456_007G306700 [Gossypium
            raimondii]
          Length = 472

 Score =  285 bits (730), Expect = 3e-74
 Identities = 171/362 (47%), Positives = 213/362 (58%), Gaps = 45/362 (12%)
 Frame = +2

Query: 2    GMLSDLQGWXXXXXXXXXXXXAQSHSPGDN-----------GKRV-----SMTSANQFGY 133
            G L+DLQ W              S + G             GKR      S TS+ Q+ Y
Sbjct: 15   GFLNDLQDWELSLKDKGKNKKMTSQASGKEQLNITEKGRPTGKRSLNNSSSTTSSEQYDY 74

Query: 134  SRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYA 313
             +N D  + +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSP+AVAYA
Sbjct: 75   LKNYDKRSNLSTSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAYA 134

Query: 314  NRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDSEFALRLE 493
            NRAMAYL+I++F+EAE+DC+EALNLDDRYIKAYSRRATARKEL KLKESIED+EF LRLE
Sbjct: 135  NRAMAYLKIRKFQEAEDDCSEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFGLRLE 194

Query: 494  PENQEVKKQHADVKGLYKKEVLKKASAAAAR------------------------DSTQE 601
            P NQ++KKQHA+ K LY+KE+L+KAS    +                        DSTQ 
Sbjct: 195  PNNQDMKKQHAEFKALYEKEILQKASGVIKKSMQGAQEVGKSATIDNGLGMHTMSDSTQ- 253

Query: 602  AKRVGVTEIQTGHTKVGGKPSDVGSGSKTARISVASGNISSKPQSYGPSEGGKALKVNPQ 781
              R G+  +Q   TKV    S+     K  + SV    I  +  S G +  G  L     
Sbjct: 254  --RKGIAAVQGSQTKV----SECDKQKKPEKGSVTLEEIGKRNTSAGNTADGTQLDAEIA 307

Query: 782  GVQSL-----DKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPA 946
            G +++      +K+E K +VQ+L             K++SPP TAYQFEVSW+ LSGD +
Sbjct: 308  GPENIKRDTKSRKQELKASVQDLASRAASRAMAEAAKSISPPSTAYQFEVSWRALSGDRS 367

Query: 947  LQ 952
            LQ
Sbjct: 368  LQ 369


>ref|XP_009767331.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5
           [Nicotiana sylvestris]
          Length = 449

 Score =  285 bits (729), Expect = 4e-74
 Identities = 158/295 (53%), Positives = 192/295 (65%), Gaps = 15/295 (5%)
 Frame = +2

Query: 113 SANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALS 292
           +A  + YS+  +P + +SS +L +E + DANSEKELGNE+FKQKKF EAIDCYSRSIALS
Sbjct: 63  AAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALS 122

Query: 293 PSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDS 472
           P+AVAYANRAMAYL++KRF+EAENDCTEALNLDDRYIKAYSRR+TARKEL KLKESIED+
Sbjct: 123 PTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDA 182

Query: 473 EFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVG 652
           EFA RLEP+NQE+KKQ+ +VK LY+KE+LK+ S A    S Q A+  G T       K G
Sbjct: 183 EFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATG-VSAQGAQNTGKT------NKTG 235

Query: 653 GKPSDVGSGSKTARISVASGNISSKP---------------QSYGPSEGGKALKVNPQGV 787
                VGS  K A +       SS+                 S G         +NP   
Sbjct: 236 PVIQSVGSSQKVAEVRKIPAKESSRDVPGTAMEVEDTHMQINSKGSDASATVPTLNPAKR 295

Query: 788 QSLDKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
              + K+E K +VQEL             KN++PP +AYQFEVSW+GLSGD  LQ
Sbjct: 296 PHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQ 350


>ref|XP_009767326.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
           [Nicotiana sylvestris]
          Length = 454

 Score =  285 bits (729), Expect = 4e-74
 Identities = 158/295 (53%), Positives = 192/295 (65%), Gaps = 15/295 (5%)
 Frame = +2

Query: 113 SANQFGYSRNSDPITRISSSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALS 292
           +A  + YS+  +P + +SS +L +E + DANSEKELGNE+FKQKKF EAIDCYSRSIALS
Sbjct: 68  AAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELGNEFFKQKKFKEAIDCYSRSIALS 127

Query: 293 PSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELRKLKESIEDS 472
           P+AVAYANRAMAYL++KRF+EAENDCTEALNLDDRYIKAYSRR+TARKEL KLKESIED+
Sbjct: 128 PTAVAYANRAMAYLKLKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESIEDA 187

Query: 473 EFALRLEPENQEVKKQHADVKGLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVG 652
           EFA RLEP+NQE+KKQ+ +VK LY+KE+LK+ S A    S Q A+  G T       K G
Sbjct: 188 EFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATG-VSAQGAQNTGKT------NKTG 240

Query: 653 GKPSDVGSGSKTARISVASGNISSKP---------------QSYGPSEGGKALKVNPQGV 787
                VGS  K A +       SS+                 S G         +NP   
Sbjct: 241 PVIQSVGSSQKVAEVRKIPAKESSRDVPGTAMEVEDTHMQINSKGSDASATVPTLNPAKR 300

Query: 788 QSLDKKREQKTAVQELXXXXXXXXXXXXXKNLSPPKTAYQFEVSWKGLSGDPALQ 952
              + K+E K +VQEL             KN++PP +AYQFEVSW+GLSGD  LQ
Sbjct: 301 PHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQ 355