BLASTX nr result
ID: Papaver30_contig00000538
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00000538
(1535 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010270866.1| PREDICTED: chloroplast stem-loop binding pro... 652 0.0
ref|XP_010270864.1| PREDICTED: chloroplast stem-loop binding pro... 650 0.0
ref|XP_012088856.1| PREDICTED: chloroplast stem-loop binding pro... 644 0.0
ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding pro... 639 e-180
ref|XP_010458216.1| PREDICTED: chloroplast stem-loop binding pro... 635 e-179
ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding pro... 635 e-179
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu... 635 e-179
ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding pro... 635 e-179
ref|XP_011023817.1| PREDICTED: chloroplast stem-loop binding pro... 635 e-179
ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding pro... 634 e-179
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr... 634 e-179
gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides] 634 e-179
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 634 e-179
ref|XP_009148185.1| PREDICTED: chloroplast stem-loop binding pro... 634 e-179
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop... 634 e-179
emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana] 634 e-179
gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina] 633 e-178
ref|XP_008442117.1| PREDICTED: chloroplast stem-loop binding pro... 633 e-178
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps... 632 e-178
gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana] 632 e-178
>ref|XP_010270866.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 381
Score = 652 bits (1681), Expect = 0.0
Identities = 321/380 (84%), Positives = 347/380 (91%), Gaps = 2/380 (0%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHP-IQY-KRKEWQTRGALQVKASAAKKILI 1143
+RLVVVQQKQ DFNG+RL + IQ+ KRKEWQ +GA QVKAS+AKKILI
Sbjct: 2 ARLVVVQQKQPSFSLLPSSLS-DFNGVRLSNSSIQFSKRKEWQAKGAFQVKASSAKKILI 60
Query: 1142 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKD 963
MGGTRFIG+FLSRLLVKEGHQVTLFTRGK PI+Q LPGES+QDY DFSSKI HLKGDRKD
Sbjct: 61 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPITQQLPGESDQDYADFSSKILHLKGDRKD 120
Query: 962 YDFVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFES 783
++FVKTSLAAEGFDVVYDINGREA+EVEPILD LPKLEQYIYCSSAGVYLKSDLLPHFE+
Sbjct: 121 FEFVKTSLAAEGFDVVYDINGREADEVEPILDGLPKLEQYIYCSSAGVYLKSDLLPHFET 180
Query: 782 DAVDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 603
DAVDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRP+PIP
Sbjct: 181 DAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPVPIP 240
Query: 602 NSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPE 423
NSG QITQLGHVKDLA AF+ VLGN KAS+QV+NISG+KYVTFDGLARACAKA GFPEPE
Sbjct: 241 NSGVQITQLGHVKDLARAFVQVLGNAKASKQVYNISGEKYVTFDGLARACAKAAGFPEPE 300
Query: 422 LVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTF 243
+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK+ELGWKPE+DL+EGL DSYNLDFGRGT+
Sbjct: 301 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKTELGWKPEFDLIEGLADSYNLDFGRGTY 360
Query: 242 RKAADFSTDDMILEKCLVPQ 183
RKAADFSTDDMIL K LV Q
Sbjct: 361 RKAADFSTDDMILNKSLVLQ 380
>ref|XP_010270864.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 382
Score = 650 bits (1676), Expect = 0.0
Identities = 321/381 (84%), Positives = 346/381 (90%), Gaps = 3/381 (0%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHP-IQY--KRKEWQTRGALQVKASAAKKIL 1146
+RLVVVQQKQ DFNG+RL + IQ KRKEWQ +GA QVKAS+AKKIL
Sbjct: 2 ARLVVVQQKQPSFSLLPSSLS-DFNGVRLSNSSIQQFSKRKEWQAKGAFQVKASSAKKIL 60
Query: 1145 IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRK 966
IMGGTRFIG+FLSRLLVKEGHQVTLFTRGK PI+Q LPGES+QDY DFSSKI HLKGDRK
Sbjct: 61 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPITQQLPGESDQDYADFSSKILHLKGDRK 120
Query: 965 DYDFVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFE 786
D++FVKTSLAAEGFDVVYDINGREA+EVEPILD LPKLEQYIYCSSAGVYLKSDLLPHFE
Sbjct: 121 DFEFVKTSLAAEGFDVVYDINGREADEVEPILDGLPKLEQYIYCSSAGVYLKSDLLPHFE 180
Query: 785 SDAVDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 606
+DAVDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRP+PI
Sbjct: 181 TDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPVPI 240
Query: 605 PNSGNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEP 426
PNSG QITQLGHVKDLA AF+ VLGN KAS+QV+NISG+KYVTFDGLARACAKA GFPEP
Sbjct: 241 PNSGVQITQLGHVKDLARAFVQVLGNAKASKQVYNISGEKYVTFDGLARACAKAAGFPEP 300
Query: 425 ELVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGT 246
E+VHYNPKEFDFGKKKAFPFRDQHFFAS+EKAK+ELGWKPE+DL+EGL DSYNLDFGRGT
Sbjct: 301 EIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKTELGWKPEFDLIEGLADSYNLDFGRGT 360
Query: 245 FRKAADFSTDDMILEKCLVPQ 183
+RKAADFSTDDMIL K LV Q
Sbjct: 361 YRKAADFSTDDMILNKSLVLQ 381
>ref|XP_012088856.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Jatropha curcas]
gi|643708446|gb|KDP23362.1| hypothetical protein
JCGZ_23195 [Jatropha curcas]
Length = 380
Score = 644 bits (1661), Expect = 0.0
Identities = 319/378 (84%), Positives = 340/378 (89%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 1137
+RLV VQQ+ SDFNG RL IQ KRK WQT+GALQV AS +K ILIMG
Sbjct: 2 ARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTKGALQVTASTSKNILIMG 61
Query: 1136 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 957
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+Q LPGES+Q+Y DFSSKI HLKGDRKD++
Sbjct: 62 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDFE 121
Query: 956 FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 777
FVK+SL+A+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E+DA
Sbjct: 122 FVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETDA 181
Query: 776 VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 597
VDPKSRHKGKLETESLL SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182 VDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241
Query: 596 GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 417
G QITQLGHVKDLA AFI VLGN+KAS+QVFNISG+KYVTFDGLARACAKAGGFPEPELV
Sbjct: 242 GVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPELV 301
Query: 416 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 237
HYNPKEFDFGKKKAFPFRDQHFFASIEKAK LGWKPE+DLVEGL DSYNLDFGRGTFRK
Sbjct: 302 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFRK 361
Query: 236 AADFSTDDMILEKCLVPQ 183
ADFSTDD+IL K LV Q
Sbjct: 362 EADFSTDDLILGKSLVLQ 379
>ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Solanum lycopersicum]
Length = 379
Score = 639 bits (1647), Expect = e-180
Identities = 315/376 (83%), Positives = 337/376 (89%)
Frame = -1
Query: 1310 LVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGT 1131
LV +Q KQ DFNG RL QYKRK ++GALQV AS+ KKILIMGGT
Sbjct: 4 LVAIQPKQPSFSLLPSSNS-DFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMGGT 62
Query: 1130 RFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFV 951
RFIG+FLSRLLVKEGHQVTLFTRGKAPISQ LPGES+QDY DFSSK+ HLKGDR D+DFV
Sbjct: 63 RFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFDFV 122
Query: 950 KTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVD 771
K+SL+AEG+DVVYDINGREA EVEPILDALP LEQYIYCSSAGVYLK+D LPHFE DA D
Sbjct: 123 KSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDAGD 182
Query: 770 PKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGN 591
PKSRHKGKLETESLLVS+ VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG
Sbjct: 183 PKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGM 242
Query: 590 QITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHY 411
QITQLGHVKDLA AF+ VLGN+KAS+QVFNISG+KYVTFDGLA+ACAKAGGFPEPELVHY
Sbjct: 243 QITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELVHY 302
Query: 410 NPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAA 231
NPKEFDFGKKKAFPFRDQHFF SIEK+K+ELGWKP++DLVEGLTDSYNLDFGRGTFRKAA
Sbjct: 303 NPKEFDFGKKKAFPFRDQHFFTSIEKSKAELGWKPDFDLVEGLTDSYNLDFGRGTFRKAA 362
Query: 230 DFSTDDMILEKCLVPQ 183
DFSTDDMILEK LVPQ
Sbjct: 363 DFSTDDMILEKKLVPQ 378
>ref|XP_010458216.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Camelina sativa]
Length = 379
Score = 635 bits (1639), Expect = e-179
Identities = 305/356 (85%), Positives = 332/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +G L V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVHQPKGGLYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL +KGV
Sbjct: 143 EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQTKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISGDKYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGDKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKRVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum tuberosum]
Length = 379
Score = 635 bits (1639), Expect = e-179
Identities = 314/376 (83%), Positives = 336/376 (89%)
Frame = -1
Query: 1310 LVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGT 1131
LV +Q KQ DFNG RL QYKRK ++GALQV AS+ KKILIMGGT
Sbjct: 4 LVAIQPKQPSFSVLPSSHS-DFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMGGT 62
Query: 1130 RFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFV 951
RFIG+FLSRLLVKEGHQVTLFTRGKAPISQ LPGES+QDY DFSSK+ HLKGDR D+DFV
Sbjct: 63 RFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFDFV 122
Query: 950 KTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVD 771
K+SL+AEG+DVVYDINGREA EVEPILDALP LEQYIYCSSAGVYLK+D LPHFE DA D
Sbjct: 123 KSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDAGD 182
Query: 770 PKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGN 591
PKSRHKGKLETESLLVS+ VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG
Sbjct: 183 PKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGM 242
Query: 590 QITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHY 411
QITQLGHVKDLA AF+ VLGN+KAS+QVFNISG+KYVTFDGLA+ACAKAGGFPEPELVHY
Sbjct: 243 QITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELVHY 302
Query: 410 NPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAA 231
NPKEFDFGKKKAFPFRDQHFF SIEK+K+ LGWKP++DLVEGLTDSYNLDFGRGTFRKAA
Sbjct: 303 NPKEFDFGKKKAFPFRDQHFFTSIEKSKALLGWKPDFDLVEGLTDSYNLDFGRGTFRKAA 362
Query: 230 DFSTDDMILEKCLVPQ 183
DFSTDDMILEK LVPQ
Sbjct: 363 DFSTDDMILEKKLVPQ 378
>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
gi|550324645|gb|EEE95397.2| hypothetical protein
POPTR_0013s00760g [Populus trichocarpa]
Length = 380
Score = 635 bits (1639), Expect = e-179
Identities = 310/378 (82%), Positives = 339/378 (89%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 1137
+RLV VQQ+ SDFNG RL ++ KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2 ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSASSSKNILIMG 61
Query: 1136 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 957
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QPLPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDFE 121
Query: 956 FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 777
FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122 FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181
Query: 776 VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 597
VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182 VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241
Query: 596 GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 417
G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242 GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301
Query: 416 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 237
HYNPK+FDFGKKKAFPFRDQHFFASI+KAK LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302 HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361
Query: 236 AADFSTDDMILEKCLVPQ 183
ADF TDD+I+ K LV Q
Sbjct: 362 EADFFTDDLIIGKSLVLQ 379
>ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Camelina sativa]
Length = 379
Score = 635 bits (1638), Expect = e-179
Identities = 304/356 (85%), Positives = 333/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG ++ +QYKRK Q +GAL V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKIHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL +KGV
Sbjct: 143 EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQTKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISGDKYVTFDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASKEIFNISGDKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKRVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|XP_011023817.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Populus euphratica]
Length = 380
Score = 635 bits (1637), Expect = e-179
Identities = 311/378 (82%), Positives = 338/378 (89%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 1137
+RLV VQQ+ SDFNG RL +Q KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2 ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIMG 61
Query: 1136 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 957
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+Q LPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYADFSSKILHLKGDRKDFE 121
Query: 956 FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 777
FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122 FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181
Query: 776 VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 597
VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182 VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241
Query: 596 GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 417
G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242 GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301
Query: 416 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 237
HYNPK+FDFGKKKAFPFRDQHFFASI+KAK LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302 HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361
Query: 236 AADFSTDDMILEKCLVPQ 183
ADF TDD+IL K LV Q
Sbjct: 362 EADFFTDDLILGKSLVLQ 379
>ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica oleracea var. oleracea]
gi|923877393|ref|XP_013711566.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b, chloroplastic-like
[Brassica napus] gi|674938358|emb|CDX94984.1|
BnaC05g06870D [Brassica napus]
Length = 378
Score = 634 bits (1636), Expect = e-179
Identities = 307/356 (86%), Positives = 332/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIGIFLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHSQVQYKRKVQQPKGALYVSASSEKKILIMGGTRFIGIFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPILDALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
gi|557095353|gb|ESQ35935.1| hypothetical protein
EUTSA_v10007937mg [Eutrema salsugineum]
Length = 379
Score = 634 bits (1636), Expect = e-179
Identities = 305/356 (85%), Positives = 333/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK +Q +GAL V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 634 bits (1636), Expect = e-179
Identities = 311/378 (82%), Positives = 338/378 (89%)
Frame = -1
Query: 1316 SRLVVVQQKQXXXXXXXXXXXSDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 1137
+RLV VQQ+ SDFNG RL +Q KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2 ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIMG 61
Query: 1136 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 957
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+Q LPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFE 121
Query: 956 FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 777
FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122 FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181
Query: 776 VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 597
VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182 VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241
Query: 596 GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 417
G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242 GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301
Query: 416 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 237
HYNPK+FDFGKKKAFPFRDQHFFASI+KAK LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302 HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361
Query: 236 AADFSTDDMILEKCLVPQ 183
ADF TDD+IL K LV Q
Sbjct: 362 EADFFTDDLILGKSLVLQ 379
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 634 bits (1635), Expect = e-179
Identities = 304/356 (85%), Positives = 333/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK +Q +GAL V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KY+TFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|XP_009148185.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica rapa]
gi|923640343|ref|XP_013641012.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b, chloroplastic
isoform X1 [Brassica napus] gi|674939829|emb|CDX93509.1|
BnaA06g05390D [Brassica napus]
Length = 378
Score = 634 bits (1634), Expect = e-179
Identities = 307/356 (86%), Positives = 332/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIGIFLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVQQPKGALYVSASSEKKILIMGGTRFIGIFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPILDALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
chloroplast stem-loop binding protein [Arabidopsis
thaliana]
Length = 378
Score = 634 bits (1634), Expect = e-179
Identities = 304/356 (85%), Positives = 333/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIG+FLSR+LVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 634 bits (1634), Expect = e-179
Identities = 304/356 (85%), Positives = 333/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIG+FLSR+LVKEGHQVTL
Sbjct: 19 DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTL 78
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 79 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 138
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 139 EEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGV 198
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 199 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 258
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 259 NEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 318
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 319 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 374
>gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina]
Length = 379
Score = 633 bits (1633), Expect = e-178
Identities = 304/356 (85%), Positives = 332/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK +Q +GAL V AS+ KKILIMGGTRFIGIFLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGIFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETES L SKGV
Sbjct: 143 EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESFLESKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFVTVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNI+G+KYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNIAGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>ref|XP_008442117.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Cucumis melo]
Length = 383
Score = 633 bits (1632), Expect = e-178
Identities = 309/356 (86%), Positives = 325/356 (91%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG RL +QYKRK Q +G L V ASA K ILIMGGTRFIGIFLSRLLVKEGHQVTL
Sbjct: 27 DFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTL 86
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGKAP++Q LPGESE DY DF SKI HLKGDRKD+DFVK+SL+A GFDVVYDINGREA
Sbjct: 87 FTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREA 146
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPHFE DAVDPKSRHKGKLETESLL SK V
Sbjct: 147 VEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDV 206
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG QITQLGHVKDLATAF+ VLG
Sbjct: 207 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAFVQVLG 266
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
NDKASQQVFNISG+KYVTFDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKK FPFRDQHF
Sbjct: 267 NDKASQQVFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHF 326
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAKS LGWKPE+DLVEGL DSYNLDFGRGTFRK ADFSTDD+IL K LV Q
Sbjct: 327 FASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ 382
>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
gi|482573799|gb|EOA37986.1| hypothetical protein
CARUB_v10009455mg [Capsella rubella]
Length = 379
Score = 632 bits (1631), Expect = e-178
Identities = 304/356 (85%), Positives = 331/356 (92%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPI++ALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPIIEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLKVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378
>gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 632 bits (1631), Expect = e-178
Identities = 304/356 (85%), Positives = 332/356 (93%)
Frame = -1
Query: 1250 DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 1071
DFNG +L +QYKRK Q +GAL V AS+ KKILIMGGTRFIG+FLSR+LVKEGHQVTL
Sbjct: 23 DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTL 82
Query: 1070 FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 891
FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83 FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142
Query: 890 EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 711
EEVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143 EEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGV 202
Query: 710 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 531
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 203 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 262
Query: 530 NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 351
N+KAS+++FNISG+KYVTFDGLA ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263 NEKASREIFNISGEKYVTFDGLAXACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322
Query: 350 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 183
FAS+EKAK LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323 FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378