BLASTX nr result

ID: Papaver30_contig00000516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00000516
         (1669 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010250283.1| PREDICTED: pre-mRNA-processing protein 40C i...    64   5e-07
ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C i...    64   5e-07

>ref|XP_010250283.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Nelumbo
            nucifera]
          Length = 894

 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +1

Query: 1003 EIYFNMGIDFIFEGCAPQSPSFVC*CLKLTAEASDQVSADGETILTSGTTTK*VLKFDSR 1182
            E  F   +  ++E CA +  + +C  +  T EA+ Q++ DG+T+LTS +T K +LK D R
Sbjct: 776  EKLFREHVKILYERCAREFRTLLCEVI--TTEAASQMTNDGKTVLTSWSTAKRLLKTDPR 833

Query: 1183 YSKMRRKERETLW 1221
            YSKM RKERE LW
Sbjct: 834  YSKMPRKEREALW 846


>ref|XP_010250268.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Nelumbo
            nucifera] gi|719963615|ref|XP_010250275.1| PREDICTED:
            pre-mRNA-processing protein 40C isoform X1 [Nelumbo
            nucifera]
          Length = 1088

 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +1

Query: 1003 EIYFNMGIDFIFEGCAPQSPSFVC*CLKLTAEASDQVSADGETILTSGTTTK*VLKFDSR 1182
            E  F   +  ++E CA +  + +C  +  T EA+ Q++ DG+T+LTS +T K +LK D R
Sbjct: 970  EKLFREHVKILYERCAREFRTLLCEVI--TTEAASQMTNDGKTVLTSWSTAKRLLKTDPR 1027

Query: 1183 YSKMRRKERETLW 1221
            YSKM RKERE LW
Sbjct: 1028 YSKMPRKEREALW 1040


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