BLASTX nr result
ID: Papaver29_contig00064621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00064621
(637 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008358596.1| PREDICTED: uncharacterized protein LOC103422... 110 9e-22
ref|XP_008385533.1| PREDICTED: uncharacterized protein LOC103448... 110 9e-22
gb|KFL89552.1| hypothetical protein AmDm5_1575 [Acetobacter malo... 106 1e-20
ref|XP_008239124.1| PREDICTED: uncharacterized protein LOC103337... 105 2e-20
ref|XP_008357860.1| PREDICTED: uncharacterized protein LOC103421... 104 5e-20
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 100 7e-19
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 100 1e-18
ref|XP_008350549.1| PREDICTED: uncharacterized protein LOC103413... 99 3e-18
gb|AAB82754.1| retrofit [Oryza longistaminata] 98 4e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 98 4e-18
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 97 1e-17
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 97 1e-17
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 97 1e-17
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 97 1e-17
ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296... 96 2e-17
ref|XP_008357951.1| PREDICTED: uncharacterized protein LOC103421... 95 4e-17
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 95 4e-17
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 94 5e-17
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 94 8e-17
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 93 1e-16
>ref|XP_008358596.1| PREDICTED: uncharacterized protein LOC103422324 [Malus domestica]
Length = 1195
Score = 110 bits (274), Expect = 9e-22
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+IC K+GHS +C HRGNFAYQG +PN+SAM V + P E W DTGA +H+
Sbjct: 386 CQICWKFGHSXIQCYHRGNFAYQGRPXTPNLSAMHVQ--HQPSAPEEQFWVADTGATSHM 443
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+++ N+ + Y+G+D I TASG G+ ISH+G+S + H L N+LH
Sbjct: 444 TSDLANLELAXPYHGNDTITTASGAGLPISHIGSSKLHTSSHTLVLQNVLH 494
>ref|XP_008385533.1| PREDICTED: uncharacterized protein LOC103448069 [Malus domestica]
Length = 852
Score = 110 bits (274), Expect = 9e-22
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+IC K+GHS +C HRGNFAYQG +PN+SAM V + P E W DTGA +H+
Sbjct: 386 CQICWKFGHSXIQCYHRGNFAYQGRPXTPNLSAMHVQ--HQPSAPEEQFWVADTGATSHM 443
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+++ N+ + Y+G+D I TASG G+ ISH+G+S + H L N+LH
Sbjct: 444 TSDLANLELAXPYHGNDTITTASGAGLPISHIGSSKLHTSSHTLVLQNVLH 494
>gb|KFL89552.1| hypothetical protein AmDm5_1575 [Acetobacter malorum]
Length = 1375
Score = 106 bits (265), Expect = 1e-20
Identities = 49/111 (44%), Positives = 74/111 (66%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+IC K+GHSA +C HR NF+YQG SP + ++ ++Y P + W DTGA +H+
Sbjct: 365 CQICWKFGHSALQCYHRANFSYQGR--SPPSTLTVMHANYQPSAPLDQFWVADTGATSHM 422
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+++ N++ +T + G+D I TASG G+ ISH G+S + VP + FQL +ILH
Sbjct: 423 TSDLTNLTQATPFLGADTITTASGSGLPISHTGSSFLHVPQYAFQLKDILH 473
>ref|XP_008239124.1| PREDICTED: uncharacterized protein LOC103337733 [Prunus mume]
Length = 600
Score = 105 bits (263), Expect = 2e-20
Identities = 51/111 (45%), Positives = 69/111 (62%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+IC K H+A +CRHR NFAYQG +AM + S P S WY DTGA NH+
Sbjct: 300 CQICNKPNHTAIECRHRSNFAYQGRSPPARFTAMTATHSPPPS---SSLWYADTGATNHV 356
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
++ N+S+ Y G+DK+ SGEG+ I++ G+ST S +F+LNNILH
Sbjct: 357 TPDLHNLSHQLPYQGNDKVLVGSGEGLPIANTGSSTASASSSSFKLNNILH 407
>ref|XP_008357860.1| PREDICTED: uncharacterized protein LOC103421593 [Malus domestica]
Length = 1018
Score = 104 bits (259), Expect = 5e-20
Identities = 49/111 (44%), Positives = 72/111 (64%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+IC K+GHSA +C HR NF+YQG ++AM ++Y P E W DTGA +H+
Sbjct: 236 CQICWKFGHSALQCYHRANFSYQGRSPPSTLTAM--HANYQPSAPLEQFWVADTGATSHM 293
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+ + N++ +T + G+D I TASG G+ ISH G+S + VP + F+L +ILH
Sbjct: 294 TSYLTNLTQATPFLGADTITTASGSGLPISHTGSSFLHVPKYAFRLKDILH 344
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 100 bits (249), Expect = 7e-19
Identities = 56/149 (37%), Positives = 77/149 (51%)
Frame = +3
Query: 189 GRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHRGNFAY 368
GRGGGR SN PG G G D P+C++C K GH AA+C HR + Y
Sbjct: 234 GRGGGRGTRGRSNPAAPGRG--RGTGGNQTRGGNDRPICQVCLKRGHVAAECWHRYDETY 291
Query: 369 QGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDKINTA 548
P+ + +++Y G+ ++ WY DTGA +H+ + + Y G DKI+TA
Sbjct: 292 V-----PDERSAAAAAAY--GI--DTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTA 342
Query: 549 SGEGMFISHLGNSTVSVPHHNFQLNNILH 635
SG GM I H+G+S + P L NILH
Sbjct: 343 SGAGMEIKHIGDSVIHTPTRELHLKNILH 371
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 99.8 bits (247), Expect = 1e-18
Identities = 56/149 (37%), Positives = 77/149 (51%)
Frame = +3
Query: 189 GRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHRGNFAY 368
GRGGGR SN PG G G D P+C++C K GH AA+C HR + Y
Sbjct: 234 GRGGGRGTRGRSNPAAPGRG--RGTGGNQTRGGNDRPICQVCLKRGHVAAECWHRYDETY 291
Query: 369 QGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDKINTA 548
P+ + +++Y G+ ++ WY DTGA +H+ + + Y G DKI+TA
Sbjct: 292 V-----PDERSAAAAAAY--GI--DTNWYLDTGATDHITNELDKLDVWEKYKGGDKIHTA 342
Query: 549 SGEGMFISHLGNSTVSVPHHNFQLNNILH 635
SG GM I H+G+S + P L NILH
Sbjct: 343 SGAGMEIKHIGDSVIHTPTRELHLKNILH 371
>ref|XP_008350549.1| PREDICTED: uncharacterized protein LOC103413885 [Malus domestica]
Length = 1668
Score = 98.6 bits (244), Expect = 3e-18
Identities = 45/106 (42%), Positives = 67/106 (63%)
Frame = +3
Query: 303 CKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHL 482
C+ICCK+GHSA +C HR NF++QG +I+AM ++Y P E W DTGA +H+
Sbjct: 882 CQICCKFGHSAMQCYHRANFSFQGRPPPSSITAMQ--ANYQPSAPXEQFWVADTGATSHM 939
Query: 483 KTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQL 620
+++ N++ + + G+D I TASG G+ ISH G+S + FQL
Sbjct: 940 TSDLSNLTFAAPFTGTDTITTASGAGLQISHTGSSVLHTXKSVFQL 985
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 97.8 bits (242), Expect = 4e-18
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDM-PLCKICCKYGHSAAKCRHRG 356
N G GGGR S G G G G GQD P C++C K GH+AA C +R
Sbjct: 243 NNSGGGGGR-----SAPGGRGSGSQGRGGRGRGTGGQDRRPTCQVCFKRGHTAADCWYR- 296
Query: 357 NFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDK 536
+ Y + ++SY G+ ++ WY DTGA +H+ ++ ++ YNG ++
Sbjct: 297 ---FDEDYVADEKLVAAATNSY--GI--DTNWYIDTGATDHITGELEKLTTKEKYNGGEQ 349
Query: 537 INTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
I+TASG GM ISH+G++ V P N LNN+L+
Sbjct: 350 IHTASGAGMDISHIGHTIVHTPSRNIHLNNVLY 382
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 97.8 bits (242), Expect = 4e-18
Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGF-----PGDG------FLGXXXXXXXXXGQDMPLCKICCKYG 326
N++ G GR +G +NNG PG G + P C++C KYG
Sbjct: 204 NHQNFGRGRGRGHYNNNGGNFGHGPGRGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYG 263
Query: 327 HSAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMS 506
H A C HR + YQ T N A MV++ P +G+ WY DTGA +HL N+ ++
Sbjct: 264 HIAINCYHRFDQTYQP--TMNNHLAAMVAT---PSTVGDESWYMDTGATHHLTPNLNKLN 318
Query: 507 NSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+ T + GSDK+ +G + IS++G+ST+S + L NILH
Sbjct: 319 SHTPFAGSDKVMVGNGNRLNISNIGHSTISSVSRSLNLKNILH 361
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 96.7 bits (239), Expect = 1e-17
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDM-PLCKICCKYGHSAAKCRHRG 356
N +G GGG +G G G G G GQD P C++C K GH+AA C +R
Sbjct: 245 NSDGGGGGGGRGAPRGRGGGGQGRGGHGRGTG---GQDRRPTCQVCFKRGHTAADCWYR- 300
Query: 357 NFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDK 536
+ Y + ++SY G+ ++ WY DTGA +H+ ++ ++ YNG ++
Sbjct: 301 ---FDEDYVADEKLVAAATNSY--GI--DTNWYIDTGATDHITGELEKLTTKEKYNGGEQ 353
Query: 537 INTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
I+TASG GM ISH+G++ V P N LNN+L+
Sbjct: 354 IHTASGAGMDISHIGHTIVHTPSRNIHLNNVLY 386
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 96.7 bits (239), Expect = 1e-17
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Frame = +3
Query: 195 GGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDM------------PLCKICCKYGHSAA 338
GGG +G +N G +G G GQ P C++C K GH+AA
Sbjct: 233 GGGGGRGGNNNGGHSSNGSGGRGAPRGRSGGQARGRGRGLGGQDRRPTCQVCFKRGHTAA 292
Query: 339 KCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTS 518
C +R + Y + A ++SY G+ ++ WY DTGA +H+ ++ ++
Sbjct: 293 DCWYR----FDEDYVADEKLAAAATNSY--GI--DTNWYIDTGATDHITGELEKLTTKEK 344
Query: 519 YNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
YNG+++I+TASG GM ISH+G++TV P N LNN+L+
Sbjct: 345 YNGNEQIHTASGAGMDISHIGHTTVHTPSRNIHLNNVLY 383
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 96.7 bits (239), Expect = 1e-17
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDM-PLCKICCKYGHSAAKCRHRG 356
N +G GGG +G G G G G GQD P C++C K GH+AA C +R
Sbjct: 245 NSDGGGGGGGRGAPRGRGGGGQGRGGHGRGTG---GQDRRPTCQVCFKRGHTAADCWYR- 300
Query: 357 NFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDK 536
+ Y + ++SY G+ ++ WY DTGA +H+ ++ ++ YNG ++
Sbjct: 301 ---FDEDYVADEKLVAAATNSY--GI--DTNWYIDTGATDHITGELEKLTTKEKYNGGEQ 353
Query: 537 INTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
I+TASG GM ISH+G++ V P N LNN+L+
Sbjct: 354 IHTASGAGMDISHIGHTIVHTPSRNIHLNNVLY 386
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 96.7 bits (239), Expect = 1e-17
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 15/161 (9%)
Frame = +3
Query: 198 GGRFQGFTSNNG---FPGDGFLGXXXXXXXXXGQ--DMPLCKICCKYGHSAAKCRHRGNF 362
GGR QG++ NN + G G G + P C++C K+GH+A C HR +
Sbjct: 249 GGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDI 308
Query: 363 AYQGHYTS----------PNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNS 512
++QG T+ NI AM+ S+S NP + WY D+GA++HL N+ N++++
Sbjct: 309 SFQGGQTTISHSLNNGNQNNIPAMVASASNNPA---DESWYLDSGASHHLTQNLGNLTST 365
Query: 513 TSYNGSDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+ Y G+DK+ +G+ + IS++G+ + H+F+L + H
Sbjct: 366 SPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFH 406
>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
subsp. vesca]
Length = 323
Score = 95.5 bits (236), Expect = 2e-17
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Frame = +3
Query: 189 GRGGGRFQGFTSNN-------GFP-----GDGFLGXXXXXXXXXG-QDMPLCKICCKYGH 329
GRG G +T+ N GFP G LG Q P C+IC K GH
Sbjct: 131 GRGRGPPNYYTARNPTSNFGRGFPLNRGRGASVLGPHPSSSSLFNNQARPTCQICSKTGH 190
Query: 330 SAAKCRHRGNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSN 509
+A C +R N ++QG S N+SAM S S W D+GAN+H+ +++ N+ N
Sbjct: 191 TALDCYNRLNLSFQGRVPSRNLSAMAASGS----TPAPPTWLLDSGANSHITSDLGNLQN 246
Query: 510 STSYNGSDKINTASGE-GMFISHLGNSTVSVPHHNFQLNNILH 635
Y G+D++ E + ISH G++T+S P H F+L++ILH
Sbjct: 247 PKEYQGNDRVGGIGNETPLSISHTGSTTLSTPTHTFKLHDILH 289
>ref|XP_008357951.1| PREDICTED: uncharacterized protein LOC103421687 [Malus domestica]
Length = 1409
Score = 94.7 bits (234), Expect = 4e-17
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Frame = +3
Query: 285 GQDMPLCKICCKYGHSAAKCRHRGNFAYQGHYTSPNISAM-------MVSSSYNPGVLGE 443
G + +C+IC K GH A CRHR N++YQ P+++A M ++ Y V
Sbjct: 237 GYQVLICQICGKKGHHALDCRHRNNYSYQXAPPPPSLTAFSAQAPSHMTAAEYGQNVQHF 296
Query: 444 SP---WYFDTGANNHLKTNMQNMSNSTSYNGSDKINTASGEGMFISHLGNSTVSVPHHNF 614
S W DTG ++H+ +N+ N++ YNG +KI +GE + + H+G +T+S P H
Sbjct: 297 SAADTWVLDTGXSHHMTSNLGNLNQPVQYNGDEKITIGNGEXLAVXHIGXTTLSTPQHLL 356
Query: 615 QLNNILH 635
L N+LH
Sbjct: 357 FLKNVLH 363
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 94.7 bits (234), Expect = 4e-17
Identities = 58/152 (38%), Positives = 77/152 (50%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHRGN 359
N GR GG G SNNG G G G+ P+C +C K GH A C +R
Sbjct: 239 NRGGRSGGNNNGRRSNNG---GGRGGRGNNNGDRGGKPHPVCHLCGKTGHVVADCWYR-- 293
Query: 360 FAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDKI 539
Y ++ N A ++SY GV ++ WY DTGA +H+ + ++ YNG D+I
Sbjct: 294 --YDENFVPENKIA--AAASY--GV--DTNWYVDTGATDHITGELDKLTTREKYNGKDQI 345
Query: 540 NTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
TASG GM I H+G+S + P N L NILH
Sbjct: 346 YTASGAGMDIKHIGHSVICTPTRNIYLKNILH 377
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 94.4 bits (233), Expect = 5e-17
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Frame = +3
Query: 180 NYEGRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHRGN 359
N+ G F+G SN G G P C+ICCK GH A +C HR +
Sbjct: 287 NHRNSSQGGFRGGHSNKGRANPG--------------SRPQCQICCKIGHVATECWHRFD 332
Query: 360 FAYQGHYTSPNISAMMVSSSYN----PGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNG 527
+Q + N + PG+LGE+PW+ DTGA +H+ +++ N+S ++G
Sbjct: 333 NQFQPKASHSNQFSSSAQDPQALMAAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSG 392
Query: 528 SDKINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
DK+ +G+G+++ H G+S++ L N+LH
Sbjct: 393 DDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLH 428
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 93.6 bits (231), Expect = 8e-17
Identities = 52/149 (34%), Positives = 76/149 (51%)
Frame = +3
Query: 189 GRGGGRFQGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHRGNFAY 368
GRG GR +G + G G PLC +C K GH AA C HR Y
Sbjct: 157 GRGSGRGRGSSQQRGNDG-----------------RPLCHVCYKRGHVAANCWHR----Y 195
Query: 369 QGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSDKINTA 548
Y + ++ +++Y+ G +S WY DTGA +H+ + ++ ++ Y G D+I+TA
Sbjct: 196 DEDYVPDD--KLVAAATYSHGA--DSNWYVDTGATDHITSQLEKLNTREVYKGHDQIHTA 251
Query: 549 SGEGMFISHLGNSTVSVPHHNFQLNNILH 635
SG GM I H+G++ V P LNN+LH
Sbjct: 252 SGAGMKIKHIGHAIVHTPTRPLHLNNVLH 280
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 93.2 bits (230), Expect = 1e-16
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Frame = +3
Query: 189 GRGGGRF-----QGFTSNNGFPGDGFLGXXXXXXXXXGQDMPLCKICCKYGHSAAKCRHR 353
G GGGR QG N G G G G D P C++C K GH+ KC R
Sbjct: 113 GNGGGRGHGQPNQGQNLNRGRGGQG--RGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKR 170
Query: 354 GNFAYQGHYTSPNISAMMVSSSYNPGVLGESPWYFDTGANNHLKTNMQNMSNSTSYNGSD 533
+ +T SA +SSY G + WY DTGA +H+ +++ ++ YNG D
Sbjct: 171 ----FDASFTGEEKSAAAATSSYGVG----TNWYIDTGATDHITSDLDKLTVREKYNGGD 222
Query: 534 KINTASGEGMFISHLGNSTVSVPHHNFQLNNILH 635
+++TASG GM I+ +G S V H + L NIL+
Sbjct: 223 QVHTASGSGMKINQIGQSIVRTQHRDLILKNILY 256