BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00063584
         (678 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   259   8e-67
ref|XP_012701436.1| PREDICTED: uncharacterized protein LOC105914...   256   1e-65
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   252   1e-64
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   252   1e-64
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   252   1e-64
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   251   3e-64
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   249   1e-63
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                249   1e-63
ref|XP_012701527.1| PREDICTED: uncharacterized protein LOC105914...   247   4e-63
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   247   4e-63
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   247   5e-63
gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subc...   243   6e-62
gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subc...   243   6e-62
gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Ja...   243   6e-62
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   243   8e-62
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   243   8e-62
ref|XP_008365969.1| PREDICTED: uncharacterized protein LOC103429...   242   2e-61
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   242   2e-61
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-...   242   2e-61
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   241   2e-61

>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  259 bits (663), Expect = 8e-67
 Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 1/207 (0%)
 Frame = +1

Query: 58   TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYIEHWELVKRILRYLKHSIDYGL 237
            TD T YRS+VG LQYL +TRPDIS AVNK CQ++H P I+HW  VKRILRY+K S+D GL
Sbjct: 1851 TDATRYRSIVGALQYLTLTRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGL 1910

Query: 238  FFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNLVSWNARXXXXXXXXXXXXEYR 417
              +      ++A+ DADWAGS DDRR T G+ ++ G NLVSW+AR            EY+
Sbjct: 1911 KISRSSSTLVSAFLDADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYK 1970

Query: 418  GVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGATYLTANPIFHTRTKHVEIDYHFVR 594
             VA AT+E++W+Q+L+ ELG+ +P T  +WCDN+GATYL  NP+FH RTKH+EIDYHFVR
Sbjct: 1971 AVANATAEVMWVQALLKELGINSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVR 2030

Query: 595  ERVARKQLHVKFVSSRDQLDDIFTKGL 675
            ERVARKQL +KF+SS DQ+ D FTK L
Sbjct: 2031 ERVARKQLEIKFISSGDQVADGFTKPL 2057


>ref|XP_012701436.1| PREDICTED: uncharacterized protein LOC105914402 [Setaria italica]
          Length = 993

 Score =  256 bits (653), Expect = 1e-65
 Identities = 124/229 (54%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            VSTP++ + K+           D T YRSVVG LQYL +TRPDIS AVNK CQY+H P  
Sbjct: 748  VSTPMSTSEKLSAQEGTPLGPKDATAYRSVVGALQYLTLTRPDISFAVNKVCQYLHAPTT 807

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
             HW  VKRILRYLKH++  GL  +      ++A+SDADWAG  DDRR T G+ ++ G NL
Sbjct: 808  LHWAAVKRILRYLKHTMKIGLRISKTSSLLVSAFSDADWAGDVDDRRSTGGFAVFLGSNL 867

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGATYL 531
            ++W+AR            EY+ VA AT+E++WIQ L+ ELG+  P    LWCDNIGA YL
Sbjct: 868  IAWSARKQATVSRSSTEAEYKAVANATAEIMWIQILLYELGIQAPRAAKLWCDNIGAKYL 927

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            +ANP+FH RTKH+E+DYHFVRERVAR+ L ++F+S+RDQ+ D FTK LP
Sbjct: 928  SANPVFHARTKHIEVDYHFVRERVARRLLDIEFISTRDQVADGFTKPLP 976


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  252 bits (644), Expect = 1e-64
 Identities = 122/232 (52%), Positives = 163/232 (70%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1   VSTPLAANVKIQN-----LGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
           VSTPL+ + K+       LG +   D T YRSVVG LQYL +TRPDIS ++NK CQ++H 
Sbjct: 141 VSTPLSTSEKLSVNEGTLLGPQ---DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 197

Query: 166 PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
           P   HW  VKRILRY+K+++D GL F       ++ +SDADWAGS DDRR T G+ ++ G
Sbjct: 198 PTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLG 257

Query: 346 GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGA 522
            NLVSW+AR            EY+ +A AT+E++W+Q+L+ ELGV +P    LWCDN+GA
Sbjct: 258 PNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGA 317

Query: 523 TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            YL+ANPIFH RTKH+E+D+HFVRERVARK L + ++S++DQ+ D FTK +P
Sbjct: 318 KYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIP 369


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  252 bits (644), Expect = 1e-64
 Identities = 122/232 (52%), Positives = 163/232 (70%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1    VSTPLAANVKIQN-----LGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
            VSTPL+ + K+       LG +   D T YRSVVG LQYL +TRPDIS ++NK CQ++H 
Sbjct: 571  VSTPLSTSEKLSVNEGTLLGPQ---DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 627

Query: 166  PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
            P   HW  VKRILRY+K+++D GL F       ++ +SDADWAGS DDRR T G+ ++ G
Sbjct: 628  PTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLG 687

Query: 346  GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGA 522
             NLVSW+AR            EY+ +A AT+E++W+Q+L+ ELGV +P    LWCDN+GA
Sbjct: 688  PNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGA 747

Query: 523  TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
             YL+ANPIFH RTKH+E+D+HFVRERVARK L + ++S++DQ+ D FTK +P
Sbjct: 748  KYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIP 799


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  252 bits (644), Expect = 1e-64
 Identities = 122/232 (52%), Positives = 163/232 (70%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1    VSTPLAANVKIQN-----LGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
            VSTPL+ + K+       LG +   D T YRSVVG LQYL +TRPDIS ++NK CQ++H 
Sbjct: 1149 VSTPLSTSEKLSVNEGTLLGPQ---DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHA 1205

Query: 166  PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
            P   HW  VKRILRY+K+++D GL F       ++ +SDADWAGS DDRR T G+ ++ G
Sbjct: 1206 PTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLG 1265

Query: 346  GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGA 522
             NLVSW+AR            EY+ +A AT+E++W+Q+L+ ELGV +P    LWCDN+GA
Sbjct: 1266 PNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGA 1325

Query: 523  TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
             YL+ANPIFH RTKH+E+D+HFVRERVARK L + ++S++DQ+ D FTK +P
Sbjct: 1326 KYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIP 1377


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  251 bits (641), Expect = 3e-64
 Identities = 126/226 (55%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
 Frame = +1

Query: 1   VSTPLAANVKIQNLGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYIEH 180
           +++P+AA   +      +  DPTLYRS+VG LQY  ITRPDI+  VNK CQ+MH P   H
Sbjct: 78  MASPMAAGPVLSIADGTRLEDPTLYRSLVGALQYCTITRPDIAYTVNKLCQFMHAPTSTH 137

Query: 181 WELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNLVS 360
            ++VKR+LRYLK S+ YGL F P     L AY+DADWA   DDRR TSGYCI+FGGNLVS
Sbjct: 138 LQVVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVS 197

Query: 361 WNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVAT-PTPSLWCDNIGATYLTA 537
           W+A             EYRG+A A +EL WIQSL+ EL +     P L+CDN+  TYL A
Sbjct: 198 WSASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAA 257

Query: 538 NPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
           NPI H+R KHVEIDYHFVRERV +K L V+F+ S DQ+ DI TK L
Sbjct: 258 NPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSL 303


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  249 bits (635), Expect = 1e-63
 Identities = 122/229 (53%), Positives = 157/229 (68%), Gaps = 3/229 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            V TPL+   K+     EK    D T YRSVVG LQYL +TRPDIS +VNK CQ++  P  
Sbjct: 807  VGTPLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISFSVNKVCQFLQNPTT 866

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
             HW  VKRILRY+K ++  GL         ++AYSDADWA   DD+R T G+ ++ G NL
Sbjct: 867  VHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNL 926

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPTPS-LWCDNIGATYL 531
            +SWNAR            EY+ +A AT+E++W++ L+ ELG++ P PS LWCDNIGATYL
Sbjct: 927  ISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYL 986

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            + NP+FH RTKH+EIDYHFVRE+VA+KQL ++FV S+DQ+ D FTK LP
Sbjct: 987  SVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTKALP 1035


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score =  249 bits (635), Expect = 1e-63
 Identities = 125/232 (53%), Positives = 158/232 (68%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1    VSTPLAANVKIQ-----NLGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
            V TPL ++ K+       LGSE   D T Y SVVG LQYL +TRPDIS AVNK CQ++H 
Sbjct: 768  VDTPLCSSEKLSIEDGNKLGSE---DATKYCSVVGALQYLTLTRPDISFAVNKVCQFLHS 824

Query: 166  PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
            P   HW  VKRILRY+K +   G+ F+      ++A++DADWAG  DDRR T G+ ++ G
Sbjct: 825  PTTIHWSAVKRILRYIKGTTKLGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLG 884

Query: 346  GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVA-TPTPSLWCDNIGA 522
             NL+SW A+            EY+ +A AT+E+IW+Q L+ ELGV   P   LWCDN+GA
Sbjct: 885  NNLISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNLGA 944

Query: 523  TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            TYL+ANPIFH RTKH+EID+HFVRERVA+K L V+F+S+ DQL D FTK LP
Sbjct: 945  TYLSANPIFHARTKHIEIDFHFVRERVAQKLLEVRFISTGDQLADGFTKALP 996


>ref|XP_012701527.1| PREDICTED: uncharacterized protein LOC105914440 [Setaria italica]
          Length = 961

 Score =  247 bits (631), Expect = 4e-63
 Identities = 124/228 (54%), Positives = 160/228 (70%), Gaps = 3/228 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQ-NLGSEKFTDPTL-YRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            V+TPL+ + K+  + GS    D T  YRS+VG LQYL +TRPDI+ +VNK CQ++H P  
Sbjct: 710  VNTPLSTSEKLSLHEGSLLGPDDTSRYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTT 769

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
             HW  VKRILRYLK   + GL         ++A+SDADWAGS DDRR T G+ ++ G NL
Sbjct: 770  VHWAAVKRILRYLKQCTELGLKIQKSPSTLVSAFSDADWAGSVDDRRSTGGFAVFLGSNL 829

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPTPS-LWCDNIGATYL 531
            VSW+AR            EY+ +A AT+E++WIQ+L+ ELG+ +P  + LWCDNIGA YL
Sbjct: 830  VSWSARKQATVSRSSTESEYKAIANATAEVMWIQTLLRELGIPSPKAARLWCDNIGAKYL 889

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
            +ANP+FH RTKH+E+DYHFVRERVARK L ++FVSS DQ+ D FTK L
Sbjct: 890  SANPVFHARTKHIEVDYHFVRERVARKLLEIEFVSSGDQIADGFTKAL 937


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  247 bits (631), Expect = 4e-63
 Identities = 118/228 (51%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            V+TPL+ + K+       F   D T YRS+VG LQYL +TRPD+S +VNK CQY+H P  
Sbjct: 1186 VNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTT 1245

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
            +HW   KRILRYLKH++  GL  +      ++A+SDADWAG  DDR  T G+ ++ G NL
Sbjct: 1246 KHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNL 1305

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGATYL 531
            VSW+AR            EY+ +A  T+E++WIQ+L+ ELG+  P    +WCDNIGA Y+
Sbjct: 1306 VSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYM 1365

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
            TANP+FH RTKH+E+DYHFVRERVARK L V+++S++DQ+ D FTK L
Sbjct: 1366 TANPVFHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTL 1413


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  247 bits (630), Expect = 5e-63
 Identities = 121/231 (52%), Positives = 160/231 (69%), Gaps = 6/231 (2%)
 Frame = +1

Query: 1    VSTPLAANVKIQN-----LGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
            V+TPL+ + K+       LG E   D T YRS+VG LQYL +TRPD+S +VNK CQY+H 
Sbjct: 786  VNTPLSISEKLSAHEGNPLGPE---DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHA 842

Query: 166  PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
               +HW   KRILRYLKH++  GL  +      ++A+SDADWAG  DDRR T G+ ++ G
Sbjct: 843  ATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIG 902

Query: 346  GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGA 522
             NLVSW+AR            EY+ +A AT+E++WIQ+L+ ELG+  P    +WCDNIGA
Sbjct: 903  PNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGA 962

Query: 523  TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
             Y+TANP+FH RTKH+E+DYHFVRERVARK L V+++S++DQ+ D FTK L
Sbjct: 963  KYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTL 1013


>gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 846

 Score =  243 bits (621), Expect = 6e-62
 Identities = 121/229 (52%), Positives = 154/229 (67%), Gaps = 3/229 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            VSTPL+ + K+     +     D T YRSVVG LQYL +TRPDI+  VNK CQ++H P  
Sbjct: 602  VSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTT 661

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
             HW  VKRILRYLKH    GL         ++AYSDADWAGS DDRR T G+ ++ G NL
Sbjct: 662  IHWVAVKRILRYLKHCTKLGLKLCKSKSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNL 721

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGV-ATPTPSLWCDNIGATYL 531
            VSW AR            EY+ +A AT+E++W+Q+L+ EL V + P   LWCDN+GA YL
Sbjct: 722  VSWCARKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSPPMAKLWCDNLGAKYL 781

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            ++NP+FHTRTKH+E+DYHFVRERV++K L + FV + DQ+ D FTK LP
Sbjct: 782  SSNPVFHTRTKHIEVDYHFVRERVSQKLLEIDFVPTGDQVADGFTKALP 830


>gb|ABF97142.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 658

 Score =  243 bits (621), Expect = 6e-62
 Identities = 117/228 (51%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
 Frame = +1

Query: 1   VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
           V+TPL+ + K+           D T YRS+VG L YL +TRPD+S +VNK CQY+H P  
Sbjct: 74  VNTPLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTT 133

Query: 175 EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
           EHW   KRILRYLKH++  GL         ++A+SDADWAG  DDRR T G+ ++ G NL
Sbjct: 134 EHWAAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNL 193

Query: 355 VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGATYL 531
           VSW+AR            EY+ +  AT+E++WIQ+L+ ELG+  P T  +WCDNIGATY+
Sbjct: 194 VSWSARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYM 253

Query: 532 TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
            ANP+F+ RTKH+E+DYHFVRERVA+K L V+++S+ DQ+ D FTK L
Sbjct: 254 IANPVFYARTKHIEVDYHFVRERVAQKLLQVEYISTNDQVVDGFTKTL 301


>gb|AAK53860.1|AC016781_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1096

 Score =  243 bits (621), Expect = 6e-62
 Identities = 117/228 (51%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            V+TPL+ + K+           D T YRS+VG L YL +TRPD+S +VNK CQY+H P  
Sbjct: 853  VNTPLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTLTRPDLSFSVNKVCQYLHAPTT 912

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
            EHW   KRILRYLKH++  GL         ++A+SDADWAG  DDRR T G+ ++ G NL
Sbjct: 913  EHWAAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNL 972

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATP-TPSLWCDNIGATYL 531
            VSW+AR            EY+ +  AT+E++WIQ+L+ ELG+  P T  +WCDNIGATY+
Sbjct: 973  VSWSARKQATVSRSSTEAEYKALENATAEIMWIQTLLHELGIQVPKTAKVWCDNIGATYM 1032

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
             ANP+F+ RTKH+E+DYHFVRERVA+K L V+++S+ DQ+ D FTK L
Sbjct: 1033 IANPVFYARTKHIEVDYHFVRERVAQKLLQVEYISTNDQVVDGFTKTL 1080


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  243 bits (620), Expect = 8e-62
 Identities = 115/228 (50%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    STPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYIE 177
            STPL+   K+     +     D + YRS+VG LQYL +TR D+S  VNK CQ++H P   
Sbjct: 691  STPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTV 750

Query: 178  HWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNLV 357
            HW  VKRILRY+K ++++GL F       ++A+SDADWAG SDDRR T G+ ++ G NL+
Sbjct: 751  HWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLI 810

Query: 358  SWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPT-PSLWCDNIGATYLT 534
            SW+AR            EY+ +A AT+E+ W++ ++ EL +A P+   LWCDN+GATYL+
Sbjct: 811  SWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLS 870

Query: 535  ANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            ANP+FH RTKH+EIDYHFVRE+VA+K L ++F+S+ DQL D FTK LP
Sbjct: 871  ANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSLP 918


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  243 bits (620), Expect = 8e-62
 Identities = 120/228 (52%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKF--TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            VSTPL+ + K+     +     D T YRSVVG LQYL +TRPDI+  VNK CQ++H P  
Sbjct: 1003 VSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTT 1062

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNL 354
             HW  VKRILRYLK     GL  +      ++AYSDADWAGS DDRR T G+ ++ G NL
Sbjct: 1063 HHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNL 1122

Query: 355  VSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPT-PSLWCDNIGATYL 531
            VSW+AR            EY+ +A AT+E++W+Q+L+ EL V +P+   LWCDN+GA YL
Sbjct: 1123 VSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYL 1182

Query: 532  TANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
            +ANP+FH RTKH+E+DYHFVRERV+RK L + FV + DQ+ D FTK L
Sbjct: 1183 SANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKAL 1230


>ref|XP_008365969.1| PREDICTED: uncharacterized protein LOC103429605 [Malus domestica]
          Length = 1188

 Score =  242 bits (617), Expect = 2e-61
 Identities = 114/225 (50%), Positives = 156/225 (69%)
 Frame = +1

Query: 1    VSTPLAANVKIQNLGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYIEH 180
            +STP+++  K+     + + +  +YRSVVG LQYL ITRPD+S AVN+ CQ+MH P   H
Sbjct: 928  ISTPVSSGQKLSAYVGDPYANXEMYRSVVGALQYLTITRPDLSYAVNQICQFMHSPKNTH 987

Query: 181  WELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFGGNLVS 360
            W  VKRILRYLK + ++GL + PG   TL AYSDAD+AG+ D R  T G+C+Y G +LVS
Sbjct: 988  WMAVKRILRYLKATYNHGLLYKPG-TATLTAYSDADYAGNPDTRHSTGGFCVYLGSSLVS 1046

Query: 361  WNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPTPSLWCDNIGATYLTAN 540
            W+++            EYR +A   +EL W++SL  +L +    P++WCDNI +  L +N
Sbjct: 1047 WSSKKQKTVSRSSAEAEYRQLAYTAAELSWLRSLYKDLHLHLVPPTIWCDNISSIALASN 1106

Query: 541  PIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGL 675
            P+FH+RTKH+E+DYH+VRE+V RKQL V +V S+DQL DIFTKGL
Sbjct: 1107 PVFHSRTKHLEVDYHYVREKVVRKQLFVSYVCSQDQLADIFTKGL 1151


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  242 bits (617), Expect = 2e-61
 Identities = 120/232 (51%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1    VSTPLAANVKI-----QNLGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
            V+TPL+A+ K+       LG     D T YRS+VG LQYL +TR DI+ +VNK CQ++H 
Sbjct: 1187 VATPLSASEKLIAGKGTILGPN---DATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHN 1243

Query: 166  PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
            P  EHW  VKRILRY+K     GL         ++ YSDADWAG  DDRR T G+ +Y G
Sbjct: 1244 PTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLG 1303

Query: 346  GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPT-PSLWCDNIGA 522
             NLVSWNA+            EY+ +A AT+E++W+Q+L+ EL + +P    LWCDN+GA
Sbjct: 1304 DNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGA 1363

Query: 523  TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
             YL+ NP+FH RTKH+E+DYHFVRERVARK L V +VS+ DQ+ D FTK LP
Sbjct: 1364 KYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKALP 1415


>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class, partial
           [Oryza sativa Japonica Group]
          Length = 352

 Score =  242 bits (617), Expect = 2e-61
 Identities = 120/232 (51%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
 Frame = +1

Query: 1   VSTPLAANVKI-----QNLGSEKFTDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHE 165
           V+TPL+A+ K+       LG     D T YRS+VG LQYL +TR DI+ +VNK CQ++H 
Sbjct: 102 VATPLSASEKLIAGKGTILGPN---DATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHN 158

Query: 166 PYIEHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSDDRR*TSGYCIYFG 345
           P  EHW  VKRILRY+K     GL         ++ YSDADWAG  DDRR T G+ +Y G
Sbjct: 159 PTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLG 218

Query: 346 GNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPT-PSLWCDNIGA 522
            NLVSWNA+            EY+ +A AT+E++W+Q+L+ EL + +P    LWCDN+GA
Sbjct: 219 DNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGA 278

Query: 523 TYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTKGLP 678
            YL+ NP+FH RTKH+E+DYHFVRERVARK L V +VS+ DQ+ D FTK LP
Sbjct: 279 KYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKALP 330


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  241 bits (616), Expect = 2e-61
 Identities = 121/235 (51%), Positives = 159/235 (67%), Gaps = 12/235 (5%)
 Frame = +1

Query: 1    VSTPLAANVKIQ-NLGSEKF-TDPTLYRSVVGTLQYLHITRPDISVAVNKACQYMHEPYI 174
            VSTPL+   K+   +G E   +D T YRS+VG LQYL +TRPDIS +VNK CQ++  P  
Sbjct: 648  VSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTT 707

Query: 175  EHWELVKRILRYLKHSIDYGLFFTPGGDYTLNAYSDADWAGSSD---------DRR*TSG 327
             HW  VKRILRYLK ++D GL         ++A+SDADWAGS D         DRR T G
Sbjct: 708  AHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGGFADRRSTGG 767

Query: 328  YCIYFGGNLVSWNARXXXXXXXXXXXXEYRGVAIATSELIWIQSLVVELGVATPTPS-LW 504
            + ++FG NL+SW+AR            EY+ +A A +E+IW++ L+ ELG+  P  + LW
Sbjct: 768  FAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLW 827

Query: 505  CDNIGATYLTANPIFHTRTKHVEIDYHFVRERVARKQLHVKFVSSRDQLDDIFTK 669
            CDN+GATY+TANP+FH RTKH+E+DYHFVRE+VA+K L + FVSS+DQ+ D FTK
Sbjct: 828  CDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTK 882