BLASTX nr result

ID: Papaver29_contig00062827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00062827
         (1050 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|15...    85   1e-13
ref|YP_009170670.1| ORF1-ORF2 fusion protein [Maize-associated t...    69   6e-09
ref|YP_009170671.1| capsid protein [Maize-associated totivirus 1...    69   6e-09
gb|EPS72983.1| mitochondrial benzaldehyde dehydrogenase, partial...    61   2e-06
gb|KNA25408.1| hypothetical protein SOVF_006830 [Spinacia oleracea]    60   4e-06

>ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|156186255|gb|ABU55398.1|
           coat protein [Black raspberry virus F]
          Length = 769

 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
 Frame = -2

Query: 404 MDTFVRKFFPKHESPGAAFRLS-NECETSTFFDAITRTKQEEIHQVSRYTASQSMTPAAM 228
           MD F++KFF   E+PGA F  + +     TFF ++ R   + + Q   +  +Q MTP   
Sbjct: 1   MDAFLKKFFEGFEAPGAEFSFNASPARIYTFFQSLLRVDCDGVIQNRPFYVNQPMTPLGK 60

Query: 227 QNIR-----------------------------------GMNQQAWSRHMALMKTWNWGD 153
              R                                   GM   AWS HM ++K WNW D
Sbjct: 61  MTARFGSTVSTLDGISKPYLTPEGVINLNAIGDVLKSTGGMTSNAWSLHMGVVKGWNWAD 120

Query: 152 NHVTLLINALRFVFLRELTADAGNNLNVALSNLIDGRITIDRNQYFTFDY 3
           NHV LL+N LR+  ++ +   AG  L+  L    DG +TI+ +  FT  Y
Sbjct: 121 NHVPLLVNMLRYTLIKHIQTVAG-TLDATLGTYDDGHVTINSDGCFTEAY 169


>ref|YP_009170670.1| ORF1-ORF2 fusion protein [Maize-associated totivirus 1]
           gi|933617333|gb|ALG76597.1| ORF1-ORF2 fusion protein
           [Maize-associated totivirus 1]
          Length = 1261

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 51/160 (31%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
 Frame = -2

Query: 404 MDTFVRKFFPKHESPGAAFRLSNECETSTFFDAITRTKQEEIHQVSRYTASQSMTPAAM- 228
           MDTFVR FF +  +PG  F L + C T T+F         +  + S     Q+MTP  M 
Sbjct: 1   MDTFVRHFFKEVTTPGVPFVLDDACHTWTYFQGFKTVVTGDASKSSARDIYQAMTPLGML 60

Query: 227 ---------------------------QNIR-------GMNQQAWSRHMALMKTWNWGDN 150
                                       NI        GMN Q  S  MA  +T +W DN
Sbjct: 61  ETAFESMGSNYDGLTKNYLTPEGAINYSNIHDTLKQSGGMNNQELSTFMAFCQTISWHDN 120

Query: 149 HVTLLINALRFVFLRELTADAGNNLNVALSNLIDGRITID 30
           HVTLL N LR+V L + + ++  NLN AL    +  + I+
Sbjct: 121 HVTLLFNMLRYVILMK-SKESKQNLNGALGRFQEDFLEIN 159


>ref|YP_009170671.1| capsid protein [Maize-associated totivirus 1]
           gi|933617332|gb|ALG76596.1| capsid protein
           [Maize-associated totivirus 1]
          Length = 417

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 51/160 (31%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
 Frame = -2

Query: 404 MDTFVRKFFPKHESPGAAFRLSNECETSTFFDAITRTKQEEIHQVSRYTASQSMTPAAM- 228
           MDTFVR FF +  +PG  F L + C T T+F         +  + S     Q+MTP  M 
Sbjct: 1   MDTFVRHFFKEVTTPGVPFVLDDACHTWTYFQGFKTVVTGDASKSSARDIYQAMTPLGML 60

Query: 227 ---------------------------QNIR-------GMNQQAWSRHMALMKTWNWGDN 150
                                       NI        GMN Q  S  MA  +T +W DN
Sbjct: 61  ETAFESMGSNYDGLTKNYLTPEGAINYSNIHDTLKQSGGMNNQELSTFMAFCQTISWHDN 120

Query: 149 HVTLLINALRFVFLRELTADAGNNLNVALSNLIDGRITID 30
           HVTLL N LR+V L + + ++  NLN AL    +  + I+
Sbjct: 121 HVTLLFNMLRYVILMK-SKESKQNLNGALGRFQEDFLEIN 159


>gb|EPS72983.1| mitochondrial benzaldehyde dehydrogenase, partial [Genlisea aurea]
          Length = 512

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 30/52 (57%), Positives = 35/52 (67%)
 Frame = -1

Query: 792 ESSRVLLCFCGFDR*EYR*TVALQTWESGNPHEQAAQIELPMFSRLFRYYAG 637
           E  R+LL F            AL+TW+SG P+EQAAQIE+PMF RLFRYYAG
Sbjct: 94  ERQRILLRFADLVEKSNDEIAALETWDSGKPYEQAAQIEVPMFVRLFRYYAG 145


>gb|KNA25408.1| hypothetical protein SOVF_006830 [Spinacia oleracea]
          Length = 534

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -1

Query: 792 ESSRVLLCFCGFDR*EYR*TVALQTWESGNPHEQAAQIELPMFSRLFRYYAG 637
           E SR+LL F            AL+TW++G P+EQAAQIE+PM +RLFRYYAG
Sbjct: 116 ERSRILLKFADLIEKHNDAIAALETWDNGKPYEQAAQIEVPMVARLFRYYAG 167


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