BLASTX nr result

ID: Papaver29_contig00062686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00062686
         (488 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_010912918.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Glycine max]
           gi|947075538|gb|KRH24378.1| hypothetical protein
           GLYMA_12G037500 [Glycine max]
          Length = 711

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 139 DPIERFFKTRAEFDSEDPHNEGRINLQKNRRSAWHLA 29
           DPI +FFKTR  F S+DP  EG+++LQKNRR +WHLA
Sbjct: 96  DPIYKFFKTRTRFSSQDPGKEGKLSLQKNRRISWHLA 132


>ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Glycine max]
           gi|734418923|gb|KHN39840.1| Pentatricopeptide
           repeat-containing protein, chloroplastic [Glycine soja]
           gi|947080561|gb|KRH29350.1| hypothetical protein
           GLYMA_11G111200 [Glycine max]
          Length = 703

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 139 DPIERFFKTRAEFDSEDPHNEGRINLQKNRRSAWHLA 29
           DPI +FFKTR  F S+DP  EG+++LQKNRR +WHLA
Sbjct: 88  DPIYKFFKTRTRFSSQDPGKEGKLSLQKNRRISWHLA 124


>ref|XP_008808163.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 744

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -2

Query: 139 DPIERFFKTRAEFDSEDPHNEGRINLQKNRRSAWHLADIKSMDTIE 2
           DPI  FFK+R+E  + DP  EGR+ LQ+NRRS WH+AD++S D  E
Sbjct: 120 DPIRNFFKSRSE--TRDPKREGRLTLQRNRRSTWHIADLQSDDIEE 163


>ref|XP_008808162.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 756

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -2

Query: 139 DPIERFFKTRAEFDSEDPHNEGRINLQKNRRSAWHLADIKSMDTIE 2
           DPI  FFK+R+E  + DP  EGR+ LQ+NRRS WH+AD++S D  E
Sbjct: 120 DPIRNFFKSRSE--TRDPKREGRLTLQRNRRSTWHIADLQSDDIEE 163


>ref|XP_010912918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Elaeis guineensis]
          Length = 738

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = -2

Query: 139 DPIERFFKTRAEFDSEDPHNEGRINLQKNRRSAWHLADIKSMDTIE 2
           DPI  FFK+R+E  ++DP  EGR+ LQ+NRRS+WH+AD +S D  E
Sbjct: 117 DPILNFFKSRSE--TQDPKREGRLTLQRNRRSSWHIADFESDDLEE 160


Top