BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00062012
         (652 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   235   1e-59
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        227   5e-57
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   226   7e-57
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   226   7e-57
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   226   7e-57
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     226   7e-57
emb|CDP17738.1| unnamed protein product [Coffea canephora]            224   3e-56
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         223   6e-56
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           223   6e-56
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               222   1e-55
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                222   1e-55
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     220   5e-55
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   220   5e-55
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   219   8e-55
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   217   5e-54
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...   216   7e-54
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   215   2e-53
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   214   3e-53
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   213   8e-53
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  212   1e-52

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  235 bits (600), Expect = 1e-59
 Identities = 110/217 (50%), Positives = 153/217 (70%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           +I+++ HDG  R L DVR++P+L+KNLIS+ G+L+S G  +T++DG+L+   GA+V+++G
Sbjct: 267 SIKLRNHDGSTRILRDVRYVPKLKKNLISL-GALESKGLVVTMRDGILKATLGALVMLKG 325

Query: 470 NKQGNLYFLDGSXXXXXXXXXXXA-ESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
             + NLY+  GS           + + +    +LWHMRLGH  EK   IL K+GLL G K
Sbjct: 326 VMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTK 385

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
           + KL FCEHC+ GKQ R KFG+A+HNTK  LDYVH+DVWGP++  S GG  YFV+F+DD+
Sbjct: 386 ACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDF 445

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +RRVWV+ M +K+ V +IFLKWKA  E  T RK+K L
Sbjct: 446 SRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVL 482


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  227 bits (578), Expect = 5e-57
 Identities = 111/217 (51%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 401

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHMSE G   L KRGLL G  
Sbjct: 402 SIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 461

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 462 ISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDY 521

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q F++F +WK M E+QT RK+K L
Sbjct: 522 SRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKIL 558


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  226 bits (577), Expect = 7e-57
 Identities = 111/217 (51%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650  TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
            T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 550  TVQIKMFDGCIRTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 608

Query: 470  N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
            + K  NLY L G+           + S    T LWHMRLGHM+E G   L KRGLL G  
Sbjct: 609  DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQS 668

Query: 293  SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 669  IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 728

Query: 113  TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
            +R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 729  SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 765


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  226 bits (577), Expect = 7e-57
 Identities = 111/217 (51%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 401

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHM+E G   L KRGLL G  
Sbjct: 402 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQS 461

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 462 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 521

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 522 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 558


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  226 bits (577), Expect = 7e-57
 Identities = 112/217 (51%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL+DVRHIP L+++LIS   +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 309 TVQIKMFDGCIRTLSDVRHIPNLKRSLISFC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 367

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHMSE G   L KRGLL G  
Sbjct: 368 DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQS 427

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 428 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 487

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 488 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 524


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  226 bits (577), Expect = 7e-57
 Identities = 112/217 (51%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 252 TVQIKMFDGCIRTLLDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 310

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHMSE G   L KRGLL G  
Sbjct: 311 DIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 370

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 371 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDY 430

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 431 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 467


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  224 bits (572), Expect = 3e-56
 Identities = 107/218 (49%), Positives = 150/218 (68%), Gaps = 2/218 (0%)
 Frame = -3

Query: 650  TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
            +I+++ HDG  R L DVR++P L+++LIS+ G L+S G ++ ++DG+L+V  GA+++++G
Sbjct: 352  SIKLRNHDGSTRILKDVRYVPNLKRSLISL-GLLESKGLEVRMRDGILKVTSGALLMLKG 410

Query: 470  NKQGNLYFLDGSXXXXXXXXXXXAES--ELSNTRLWHMRLGHMSEKGTTILIKRGLLTGV 297
             ++ NLY+  GS           + S  +   T+LWHMRLG   EK    L K+GLL G 
Sbjct: 411  VRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGT 470

Query: 296  KSVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDD 117
            K  KL FCEHC+  KQ + KFG+ +HNTK  LDYVH+DVWGP++  S GG  YFV+FIDD
Sbjct: 471  KVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDD 530

Query: 116  YTRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
            ++RRVWV+ M SKD++  IFLKWKA  E QT RK+K L
Sbjct: 531  FSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKIL 568


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  223 bits (569), Expect = 6e-56
 Identities = 110/216 (50%), Positives = 148/216 (68%), Gaps = 1/216 (0%)
 Frame = -3

Query: 647 IRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN 468
           ++IKM DG + TL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ +
Sbjct: 176 VQIKMFDGCISTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKAD 234

Query: 467 -KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKS 291
            K  NLY L G+           + S    T LWHMRLGHMSE G   L KRGLL G   
Sbjct: 235 IKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 294

Query: 290 VKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDYT 111
            KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY+
Sbjct: 295 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYS 354

Query: 110 RRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 355 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 390


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  223 bits (569), Expect = 6e-56
 Identities = 110/216 (50%), Positives = 148/216 (68%), Gaps = 1/216 (0%)
 Frame = -3

Query: 647 IRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN 468
           ++IKM DG + TL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ +
Sbjct: 176 VQIKMFDGCISTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKAD 234

Query: 467 -KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKS 291
            K  NLY L G+           + S    T LWHMRLGHMSE G   L KRGLL G   
Sbjct: 235 IKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSI 294

Query: 290 VKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDYT 111
            KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ +DDY+
Sbjct: 295 GKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYS 354

Query: 110 RRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           R+VW Y +  K Q FD+F +WK M E+QT RK+K L
Sbjct: 355 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL 390


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  222 bits (566), Expect = 1e-55
 Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 160 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLC-TLDCKGYKYSGGDGILKVTKGSLVVMKA 218

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHMSE G   L  RGLL G  
Sbjct: 219 DIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQS 278

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ ++DY
Sbjct: 279 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDY 338

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q F++F +WK M E+QT RK+K L
Sbjct: 339 SRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKIL 375


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  222 bits (566), Expect = 1e-55
 Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 328 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLC-TLDCKGYKYSGGDGILKVTKGSLVVMKA 386

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  NLY L G+           + S    T LWHMRLGHMSE G   L  RGLL G  
Sbjct: 387 DIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQS 446

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R TSFGG+RY ++ ++DY
Sbjct: 447 IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDY 506

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K Q F++F +WK M E+QT RK+K L
Sbjct: 507 SRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKIL 543


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  220 bits (561), Expect = 5e-55
 Identities = 109/217 (50%), Positives = 148/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650  TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
            T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 378  TVQIKMFDGYIRTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 436

Query: 470  N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
            + K  NLY L G+           + S    T LWHMRLGHMSE G   L KR LL G  
Sbjct: 437  DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQS 496

Query: 293  SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+  TSFGG+RY ++ +DDY
Sbjct: 497  IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDY 556

Query: 113  TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
            +R+VW Y +  K Q FD+F +WK M E+QT +K+K L
Sbjct: 557  SRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKIL 593


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  220 bits (561), Expect = 5e-55
 Identities = 109/217 (50%), Positives = 148/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650  TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
            T++IKM DG +RTL+DVRHIP L+++LIS+  +LD  GYK +  DG+L+V +G++V+++ 
Sbjct: 378  TVQIKMFDGYIRTLSDVRHIPNLKRSLISLC-TLDRKGYKYSGGDGILKVTKGSLVVMKA 436

Query: 470  N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
            + K  NLY L G+           + S    T LWHMRLGHMSE G   L KR LL G  
Sbjct: 437  DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQS 496

Query: 293  SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+  TSFGG+RY ++ +DDY
Sbjct: 497  IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDY 556

Query: 113  TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
            +R+VW Y +  K Q FD+F +WK M E+QT +K+K L
Sbjct: 557  SRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKIL 593


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  219 bits (559), Expect = 8e-55
 Identities = 110/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           TI+IKM DG +RTL+DVRHIP L++NLIS+  +LD  GY+ +  DG+L+V +G++V+++ 
Sbjct: 285 TIQIKMFDGCIRTLSDVRHIPSLKRNLISL-STLDRKGYRYSGGDGILKVTKGSLVVMKA 343

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           + K  +LY L G+               LSN+ LWHMRLGHMSE G   L KRGLL G  
Sbjct: 344 DIKNADLYHLQGTTIVGNVAAVT---DSLSNSDLWHMRLGHMSEIGLAELSKRGLLDGQN 400

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             KL FCEHCIFGK  R KF ++ H T+  LDYVH+D+WGP+R  SFGG+RY ++ +DDY
Sbjct: 401 IGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDDY 460

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  K + F +F +WK M E+QT RK+K L
Sbjct: 461 SRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVL 497


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  217 bits (552), Expect = 5e-54
 Identities = 106/216 (49%), Positives = 138/216 (63%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           +I+I+ HDG   TL +VRH+P + KNLIS+   LDS G+  + KDGVL+V +G+ ++++G
Sbjct: 322 SIKIRTHDGSFCTLNEVRHVPLMTKNLISL-SLLDSKGFSWSGKDGVLRVWKGSNLILKG 380

Query: 470 NKQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKS 291
             +G LYFL GS              +   T+LWH+RLGHM E+G  IL K  LL G K 
Sbjct: 381 VMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKV 440

Query: 290 VKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDYT 111
             L FCEHC+FGK HR KF  A+H TK  LDY+H+D WGP R  S GG R+FVS IDDY+
Sbjct: 441 KSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYS 500

Query: 110 RRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           R  WVY M  K + F  F +WK + E QT +K+K L
Sbjct: 501 RMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRL 536


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  216 bits (551), Expect = 7e-54
 Identities = 106/215 (49%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           TIR+KMHDG + TL DVRHI +L KNLIS+   L+ +G KI ++DGVL+V+R ++V+++G
Sbjct: 18  TIRVKMHDGTIITLNDVRHIQDLHKNLISL-RLLEKNGCKIVLEDGVLKVVRRSLVVMKG 76

Query: 470 NKQGNLYFLDGSXXXXXXXXXXXAESELSN-TRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
              GNLY L G+              + +  T +WHMRLGHMSEKG ++L  +GLL  +K
Sbjct: 77  VSHGNLYPLVGTMVTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGLSLLSGQGLLKNMK 136

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              + FCEH ++GK HR KF ++ H ++  LDYVHTD+WGP++  S  GS YFV+F+DDY
Sbjct: 137 KSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVHTDLWGPAKVNSKDGSWYFVTFVDDY 196

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLK 9
           +R  W+Y +  K++VFDIF +W+AM E +T RKLK
Sbjct: 197 SRYAWIYFLKHKNEVFDIFKQWRAMVENRTGRKLK 231


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  215 bits (547), Expect = 2e-53
 Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           +++IK HDG+ RTL DVRHIP + +NLIS+  +LD+ GYK +   GV++V +G++V + G
Sbjct: 231 SVQIKTHDGMTRTLKDVRHIPRMARNLISL-STLDAEGYKYSGSGGVVKVSKGSLVYMIG 289

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           +    NLY L GS           ++ E S T +WHMRLGHMSE G   L+KR LL G  
Sbjct: 290 DMNSANLYVLRGSTLHGYVTAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCT 349

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              + FCEHC+FGK  R KF ++VH TK  LDYVH D+WGPSR  S GG+RY ++ IDDY
Sbjct: 350 QGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 409

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  KD  F  F +WK M ++QT +++K L
Sbjct: 410 SRKVWPYFLKHKDDTFAAFKEWKVMIKRQTEKEVKVL 446


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  214 bits (545), Expect = 3e-53
 Identities = 106/217 (48%), Positives = 142/217 (65%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           +++IK HDG+ RTL DVRHIP + +NLIS+  +LD+ GYK +   GV++V +G++V + G
Sbjct: 336 SVQIKTHDGMTRTLKDVRHIPGMARNLISL-STLDAEGYKYSSSGGVVKVSKGSLVYMIG 394

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           +    NLY L GS           ++ E   T LWHMRLGHMSE G   L+KR LL G  
Sbjct: 395 DMNSANLYVLRGSTLHGSVTAAAVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCT 454

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
             K+ FCEHC+FGK  R KF ++VH TK  LDYVHTD+WGPSR    GG+RY ++ IDDY
Sbjct: 455 QGKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDY 514

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  KD  F  F +WK   E+QT +++K L
Sbjct: 515 SRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVL 551


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  213 bits (542), Expect = 8e-53
 Identities = 105/217 (48%), Positives = 141/217 (64%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           +++IK HDG+ RTL DVRHIP + +NLIS+  +LD+ GYK +   GV++V +G++V + G
Sbjct: 336 SVQIKTHDGITRTLKDVRHIPGMARNLISL-STLDAEGYKYSGSGGVVKVSKGSLVYMIG 394

Query: 470 N-KQGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
           +    NLY L GS            + E + T LWHMRLGHMSE G   L+KR LL G  
Sbjct: 395 DMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCT 454

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
              + FCE C+FGK  R KF ++VH TK  LDYVH D+WGPSR  S GG+RY ++ IDDY
Sbjct: 455 QGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 514

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +R+VW Y +  KD  F  F +WK M E+QT +++K L
Sbjct: 515 SRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVL 551


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  212 bits (540), Expect = 1e-52
 Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 1/217 (0%)
 Frame = -3

Query: 650 TIRIKMHDGVVRTLTDVRHIPELRKNLISVVGSLDSSGYKITVKDGVLQVLRGAVVLIRG 471
           T++IKM+DG +RTL +VRH+ EL KNL+SV G LD  GYK  ++ G+L+V++G++V+++ 
Sbjct: 334 TVKIKMYDGTIRTLQEVRHVKELAKNLLSV-GQLDDLGYKYDIQGGILKVVKGSLVVMKA 392

Query: 470 NK-QGNLYFLDGSXXXXXXXXXXXAESELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVK 294
            K   NLY L G               E   T +WH RLGHMSE+G  +L +R L+ G+K
Sbjct: 393 KKVAANLYMLLGDTWQMADASVAVGSQE-ETTMMWHRRLGHMSERGLKVLAERNLIPGLK 451

Query: 293 SVKLGFCEHCIFGKQHRTKFGSAVHNTKERLDYVHTDVWGPSRFTSFGGSRYFVSFIDDY 114
           SV L FCEHC+  KQHR KF  +   +K  LD +H+DVW  S   S GG++YFVSFIDDY
Sbjct: 452 SVSLPFCEHCVISKQHRLKFAKSTARSKHILDLIHSDVW-ESPEVSIGGAKYFVSFIDDY 510

Query: 113 TRRVWVYPMASKDQVFDIFLKWKAMTEKQTVRKLKCL 3
           +RR+WVYP+  K  V+ +F ++KA  E +T +++KCL
Sbjct: 511 SRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCL 547