BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00062005
         (690 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   163   1e-37
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   149   1e-37
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   153   2e-37
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]   152   4e-37
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   152   5e-37
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   152   1e-36
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar...   156   1e-36
emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]   150   1e-36
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  151   2e-36
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   153   2e-36
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   152   2e-36
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   151   3e-36
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   150   4e-36
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  150   4e-36
gb|AAB82754.1| retrofit [Oryza longistaminata]                        157   6e-36
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]   150   7e-36
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]   147   9e-36
emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera]   147   1e-35
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              151   1e-35
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   146   1e-35

>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  163 bits (412), Expect = 1e-37
 Identities = 77/135 (57%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = +1

Query: 61  YSP-QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLE 237
           Y+P QNGI ER  R+VTE GL L+F A +P+S   +AF+TA +LINRLP  +    TP E
Sbjct: 572 YTPSQNGIVERKHRYVTEIGLTLMFHARVPLSLWDEAFSTAVFLINRLPPPSLAGKTPYE 631

Query: 238 LLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRL 417
           LLF K+PDYS LR F CL +P LR Y+ NKL P+S PCV +GYS  HKG++CL R++ R+
Sbjct: 632 LLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLGYSTLHKGFRCLDRKTHRV 691

Query: 418 YISRHVRFEEQTFPF 462
           Y+SRHV+F E TFP+
Sbjct: 692 YVSRHVQFYEHTFPY 706


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  149 bits (375), Expect(2) = 1e-37
 Identities = 75/152 (49%), Positives = 101/152 (66%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG+AER  RH+ E G+ALL QA +P  Y  +AF T+ YLINRLP    +  +PLE+LFH
Sbjct: 661  QNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFH 720

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            ++P YS L+VF C+ YP LR +N +KL+ RS+PC  +GYS  HKGY+CL   +G + ISR
Sbjct: 721  QKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCL-SPNGNILISR 779

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSL 525
             V F+E  FPF  +Q     ++   + S TSL
Sbjct: 780  DVIFDEXAFPFAQLQSQKQXTS-SFSSSXTSL 810



 Score = 35.4 bits (80), Expect(2) = 1e-37
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           + FT YL ++GI HR SCP+TH
Sbjct: 638 RSFTQYLTSNGIIHRISCPYTH 659


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  153 bits (386), Expect(2) = 2e-37
 Identities = 95/221 (42%), Positives = 122/221 (55%), Gaps = 7/221 (3%)
 Frame = +1

Query: 49   FMSSYSPQ-NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQS 225
            F   ++PQ NG A+R IRH+ E G+ALL Q+ +P  Y S AF T+ YLIN LP       
Sbjct: 519  FSCPHTPQQNGRAKRKIRHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQ 578

Query: 226  TPLELLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQ 405
            +PL++LFHK P+Y  LRVF CL +P LR YN +KL  RS  CV +GY++AHKGY CL   
Sbjct: 579  SPLQVLFHKIPNYHHLRVFGCLCFPSLRPYNHHKLSYRSTACVFLGYASAHKGYICLDVS 638

Query: 406  SGRLYISRHVRFEEQTFPFK------PMQQHVPVSNPGITPSDTSLLLTSPF*SRSLQFP 567
            + RLYISR V F E +FPF+      P+ QH P+         TS L+  PF S S   P
Sbjct: 639  TSRLYISRDVLFHESSFPFQSIPAPLPLPQHTPL---------TSALINPPFLSTS--SP 687

Query: 568  QDGAEP*SPVPPEITTQIDDXXXXXXXXXXPEPSIPAQSAS 690
               + P      + T+  D           P PS P  S+S
Sbjct: 688  PTVSFPIPTSSTDCTSTSDSLPPLLQVPFSPTPS-PTPSSS 727



 Score = 30.8 bits (68), Expect(2) = 2e-37
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+FSCPHT
Sbjct: 506 FKPYLEAHGIVHQFSCPHT 524


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score =  152 bits (383), Expect(2) = 4e-37
 Identities = 95/221 (42%), Positives = 120/221 (54%), Gaps = 7/221 (3%)
 Frame = +1

Query: 49   FMSSYSPQ-NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQS 225
            F   ++PQ NG AER I H+ E G+ALL Q+ +P  Y S AF T+ YLIN LP       
Sbjct: 635  FSCPHTPQQNGRAERKICHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPAKLLNFQ 694

Query: 226  TPLELLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQ 405
            +PL++LFHK P+Y  LRVF CL +P LR  N +KL  RS  CV +GY++AHKGY CL   
Sbjct: 695  SPLQVLFHKIPNYHHLRVFGCLCFPSLRPXNHHKLSYRSTACVFLGYASAHKGYICLDVS 754

Query: 406  SGRLYISRHVRFEEQTFPFK------PMQQHVPVSNPGITPSDTSLLLTSPF*SRSLQFP 567
            + RLYISR V F E +FPF+      P+ QH P   P  TP  TS L+  P  S S   P
Sbjct: 755  TSRLYISRDVLFHESSFPFQSIPAPSPLPQHTPSPLPXHTPL-TSALINPPLLSTS--SP 811

Query: 568  QDGAEP*SPVPPEITTQIDDXXXXXXXXXXPEPSIPAQSAS 690
               + P      + T+  D           P PS    S+S
Sbjct: 812  STVSFPVLTSSTDCTSTSDSLPPLLQVPFAPTPSPTPSSSS 852



 Score = 30.8 bits (68), Expect(2) = 4e-37
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+FSCPHT
Sbjct: 622 FKPYLEAHGIVHQFSCPHT 640


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  152 bits (385), Expect(2) = 5e-37
 Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
 Frame = +1

Query: 61  YSP-QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLE 237
           Y+P QNG AER  RHVTE GLALLF +H+   +  DAF+TA Y+INRLP       +P E
Sbjct: 561 YTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGGKSPFE 620

Query: 238 LLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRL 417
           LL+   P Y     F C  YPCLR Y  NKL PRS+PC+ +GYS +HKG++CL   + RL
Sbjct: 621 LLYGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGFRCLDPTTSRL 680

Query: 418 YISRHVRFEEQTFPFKPMQQHVPVSN 495
           YI+RH +F+E  FP  P  Q  P+S+
Sbjct: 681 YITRHAQFDETHFPTVPSSQAQPLSS 706



 Score = 29.6 bits (65), Expect(2) = 5e-37
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F A+L  SGI H+ SCP+T
Sbjct: 544 FKAHLRTSGIHHQLSCPYT 562


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  152 bits (384), Expect(2) = 1e-36
 Identities = 81/154 (52%), Positives = 103/154 (66%), Gaps = 7/154 (4%)
 Frame = +1

Query: 64  SPQNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELL 243
           S QNGI ER  RH+ E GL LL QA +P+ Y  DAF+TA +LINRLP    +Q  P E L
Sbjct: 471 SKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFL 530

Query: 244 FHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYI 423
           F+ +P+YS L+VF CL +P LR YN +KL+ RS PC  +GYS+ HKGY+CL++Q GR++I
Sbjct: 531 FNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQ-GRMFI 589

Query: 424 SRHVRFEEQTFPF-----KPMQ--QHVPVSNPGI 504
           SR V F+E  FPF     KP+Q   H  V  P I
Sbjct: 590 SRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCI 623



 Score = 28.5 bits (62), Expect(2) = 1e-36
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHT 64
           +    Y   +GI HR SCPHT
Sbjct: 450 RSLKTYFEQNGIIHRLSCPHT 470


>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
          Length = 1203

 Score =  156 bits (394), Expect(2) = 1e-36
 Identities = 91/215 (42%), Positives = 116/215 (53%), Gaps = 14/215 (6%)
 Frame = +1

Query: 73   NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFHK 252
            NGI+ER  RH+ E GL LL  A MP +Y S AFTTA YLINR+P    +  +P++ LF  
Sbjct: 626  NGISERKHRHIVETGLTLLTHAKMPKTYWSYAFTTATYLINRMPTPVLDMESPVQKLFGS 685

Query: 253  RPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISRH 432
            +P+YS LRVF CL +P LR YNTNKL+ RS PC+ IGYS     Y CL   SGR+YI+RH
Sbjct: 686  QPNYSKLRVFGCLCFPWLRPYNTNKLQDRSTPCIFIGYSQTQSAYLCLQPSSGRVYITRH 745

Query: 433  VRFEEQTFPFKPMQQHVPVSNPGITPSDTSLL--------------LTSPF*SRSLQFPQ 570
            V+F+E +FPF  +    P + P  T + T  L              LT P   R+ Q   
Sbjct: 746  VKFDESSFPFNKL--ITPKTIPAQTNATTQPLQPIITTIPLTPPRHLTQPPLVRTTQLVP 803

Query: 571  DGAEP*SPVPPEITTQIDDXXXXXXXXXXPEPSIP 675
              ++   P  P  TT              P P+IP
Sbjct: 804  TSSDLHQPASPPSTTS----PVLPSSPAPPSPAIP 834



 Score = 24.6 bits (52), Expect(2) = 1e-36
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 14  AYLNNSGIQHRFSCPHT 64
           A+L++SGI H  S PHT
Sbjct: 606 AFLSSSGISHLTSPPHT 622


>emb|CAN74920.1| hypothetical protein VITISV_022026 [Vitis vinifera]
          Length = 620

 Score =  150 bits (378), Expect(2) = 1e-36
 Identities = 86/186 (46%), Positives = 112/186 (60%), Gaps = 7/186 (3%)
 Frame = +1

Query: 49  FMSSYSPQ-NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQS 225
           F   ++PQ NG AER IRH+ E G+ LL Q+ +P  Y S AF T+ YLIN L        
Sbjct: 370 FSCPHTPQQNGRAERKIRHLVEIGMTLLAQSFLPSKYWSFAFQTSVYLINLLSTKLLNFQ 429

Query: 226 TPLELLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQ 405
           +PL++LFHK P+Y  LRVF CL +P LR YN +KL  RS  CV +GY++AHKGY CL   
Sbjct: 430 SPLQVLFHKIPNYHHLRVFGCLCFPSLRPYNHHKLSYRSTACVFLGYASAHKGYICLDVS 489

Query: 406 SGRLYISRHVRFEEQTFPFK------PMQQHVPVSNPGITPSDTSLLLTSPF*SRSLQFP 567
           + RLYISR V F E +FPF+      P+ QH P+++  I P    LL TS     ++ FP
Sbjct: 490 TSRLYISRDVLFHESSFPFQSIPAPLPLPQHTPLTSALINP---HLLSTSS--PPTVSFP 544

Query: 568 QDGAEP 585
              + P
Sbjct: 545 VHTSSP 550



 Score = 30.8 bits (68), Expect(2) = 1e-36
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+FSCPHT
Sbjct: 357 FKPYLEAHGIVHQFSCPHT 375


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  151 bits (381), Expect(2) = 2e-36
 Identities = 80/156 (51%), Positives = 100/156 (64%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER  RH+ E GL+LL  A MP+ +  +AF  A YLINR+P  T + STPLE LF+
Sbjct: 612  QNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFN 671

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            ++PDY  LRVF C  +P LR YNT+KL+ RS  CV +G+S  HKG++CL   SGR+YISR
Sbjct: 672  QKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISR 731

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLLTS 537
             V F+E  FPF  +      SN G       LLL S
Sbjct: 732  DVVFDENIFPFSTLH-----SNAGARLRSEILLLPS 762



 Score = 29.3 bits (64), Expect(2) = 2e-36
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           +K  ++    GI H  SCPHTH
Sbjct: 589 QKLNSFFAKIGIDHHVSCPHTH 610


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  153 bits (386), Expect(2) = 2e-36
 Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
 Frame = +1

Query: 61   YSP-QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLE 237
            Y+P QNG AER  RHVTE GLALLF +H+P  Y  DAF+TA Y+INRLP       +P E
Sbjct: 565  YTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFE 624

Query: 238  LLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRL 417
            +LF K P+Y     F C  YPCLR Y  +K  PRS+PC+ +GYS++HKG++C    + R 
Sbjct: 625  VLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTTTSRT 684

Query: 418  YISRHVRFEEQTFPFKPMQQHVPVSNPGIT 507
            YI+RH RF+E  FPF        +++ G++
Sbjct: 685  YITRHARFDEHFFPFSNTSSATSIADIGLS 714



 Score = 26.9 bits (58), Expect(2) = 2e-36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 5   KFTAYLNNSGIQHRFSCPHT 64
           +F ++L   GI H+ SCP+T
Sbjct: 547 RFQSHLQQFGIHHQMSCPYT 566


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  152 bits (384), Expect(2) = 2e-36
 Identities = 79/157 (50%), Positives = 101/157 (64%)
 Frame = +1

Query: 70  QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
           QNG AER  RH+ E GL+LL  AHMP+ +  +AF  A YLINR+P    + +TPLE  FH
Sbjct: 482 QNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKFFH 541

Query: 250 KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
           ++PDYS LRVF C  +P LR YN +KL+ RS  C  +G+SN HKG++CL   SGR+YISR
Sbjct: 542 QKPDYSSLRVFGCACWPNLRPYNKHKLQFRSKRCAFLGFSNMHKGFKCLDISSGRVYISR 601

Query: 430 HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLLTSP 540
            V F+E  FPF  +      +N G     + LLL SP
Sbjct: 602 DVVFDENIFPFSELH-----ANAG-ARLRSELLLLSP 632



 Score = 27.7 bits (60), Expect(2) = 2e-36
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           +   ++ +  GI H  SCPHTH
Sbjct: 459 RALNSFFSKIGIVHHVSCPHTH 480


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  151 bits (381), Expect(2) = 3e-36
 Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
 Frame = +1

Query: 64   SPQNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELL 243
            S QNGI ER  RH+ E GL LL QA +P+ Y  DAF+T  +LINRLP    +Q  P E L
Sbjct: 717  SKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFL 776

Query: 244  FHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYI 423
            F+ +P+YS L+VF CL +P LR YN +KL+ RS PC  +GYS+ HKGY+CL++Q GR++I
Sbjct: 777  FNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQ-GRMFI 835

Query: 424  SRHVRFEEQTFPF-----KPMQ--QHVPVSNPGI 504
            SR V F+E  FPF     KP+Q   H  V  P I
Sbjct: 836  SRSVXFDETKFPFXDXLQKPVQXVSHSTVGLPCI 869



 Score = 28.5 bits (62), Expect(2) = 3e-36
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHT 64
           +    Y   +GI HR SCPHT
Sbjct: 696 RSLKTYFEQNGIIHRLSCPHT 716


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  150 bits (378), Expect(2) = 4e-36
 Identities = 79/157 (50%), Positives = 100/157 (63%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER  +H+ E GL+LL  A MP+ +  +AF  A YLINR+P  T + STPLE LF+
Sbjct: 615  QNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFN 674

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            ++PDYS LRVF C  +P L  YNT+KL+ RS  CV +G+S  HKG++ L   SGR+YISR
Sbjct: 675  QKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISR 734

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLLTSP 540
             V F+E  FPF  +      SN G       LLL SP
Sbjct: 735  DVVFDENVFPFSTLH-----SNAGARLRSEILLLPSP 766



 Score = 29.3 bits (64), Expect(2) = 4e-36
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           +K  ++    GI H  SCPHTH
Sbjct: 592 QKLNSFFAQIGIDHHVSCPHTH 613


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  150 bits (378), Expect(2) = 4e-36
 Identities = 79/157 (50%), Positives = 100/157 (63%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER  +H+ E GL+LL  A MP+ +  +AF  A YLINR+P  T + STPLE LF+
Sbjct: 615  QNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFN 674

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            ++PDYS LRVF C  +P L  YNT+KL+ RS  CV +G+S  HKG++ L   SGR+YISR
Sbjct: 675  QKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISR 734

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLLTSP 540
             V F+E  FPF  +      SN G       LLL SP
Sbjct: 735  DVVFDENVFPFSTLH-----SNAGARLRSEILLLPSP 766



 Score = 29.3 bits (64), Expect(2) = 4e-36
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           +K  ++    GI H  SCPHTH
Sbjct: 592 QKLNSFFAQIGIDHHVSCPHTH 613


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  157 bits (397), Expect = 6e-36
 Identities = 82/157 (52%), Positives = 102/157 (64%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER  RH+ E GL+LL  A MP+ +  +AF  A YLINR+P  T + STPLE LF+
Sbjct: 612  QNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFN 671

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            ++PDYS LRVF C  +P LR YNT+KL+ RS  CV +G+S  HKG++CL   SGR+YISR
Sbjct: 672  QKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISR 731

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLLTSP 540
             V F+E  FPF  +      SN G       LLL SP
Sbjct: 732  DVVFDENVFPFSTLH-----SNAGARLRSEILLLPSP 763


>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
          Length = 1539

 Score =  150 bits (378), Expect(2) = 7e-36
 Identities = 84/177 (47%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER I H+ E G+ALL Q+ +P  Y S AF T+ YLIN LP       +PL++LFH
Sbjct: 803  QNGRAERKICHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPAKLLNFQSPLQVLFH 862

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            K P+Y  LRVF CL +P LR YN +KL  RS  CV +GY++AHKGY CL   + RLYISR
Sbjct: 863  KIPNYHHLRVFACLCFPSLRPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISR 922

Query: 430  HVRFEEQTFPFK------PMQQHVPVSNPGITPSDTSLLLTSPF*SRSLQFPQDGAE 582
             V F E +FPF+      P+ QH P+++  I P    LL TS   + S   P    +
Sbjct: 923  DVLFHESSFPFQSIPAPSPLPQHTPLTSALINP---PLLSTSSPSTMSFPVPTSSTD 976



 Score = 28.5 bits (62), Expect(2) = 7e-36
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+F CPHT
Sbjct: 782 FKPYLEAHGIVHQFLCPHT 800


>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
          Length = 828

 Score =  147 bits (371), Expect(2) = 9e-36
 Identities = 86/204 (42%), Positives = 117/204 (57%), Gaps = 17/204 (8%)
 Frame = +1

Query: 49   FMSSYSPQ-NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQS 225
            F   ++PQ NG AER IRH+ E GLAL+ Q+ +P  Y + AF TA YLIN LP       
Sbjct: 530  FSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQ 589

Query: 226  TPLELLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQ 405
            +P++ LFHK P+Y  LRVF CL +P LR Y  +KL  RS  CV +GY+ AH GY CL   
Sbjct: 590  SPIQALFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHNGYLCLDVS 649

Query: 406  SGRLYISRHVRFEEQTFPFK----PMQ--QHVPVSNPGI----------TPSDTSLLLTS 537
            + R+YISR+V F E  FPF+    P+    H+P S P +          +P+ +S ++TS
Sbjct: 650  TSRIYISRNVIFHESYFPFQSSFPPLSPPPHLPSSTPALINSPSLSAPSSPALSSPIITS 709

Query: 538  PF*SRSLQFPQDGAEP*SPVPPEI 609
             F    +  P   + P +P PP +
Sbjct: 710  DFIPPLIPVPFATSSPATPSPPPL 733



 Score = 30.8 bits (68), Expect(2) = 9e-36
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+FSCPHT
Sbjct: 517 FKPYLEAHGILHQFSCPHT 535


>emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera]
          Length = 1508

 Score =  147 bits (370), Expect(2) = 1e-35
 Identities = 79/161 (49%), Positives = 102/161 (63%), Gaps = 7/161 (4%)
 Frame = +1

Query: 49   FMSSYSPQ-NGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQS 225
            F   ++PQ NG AER I H+ E G+ALL Q+ +P  Y S AF T+ YLIN LP       
Sbjct: 811  FSCPHTPQQNGRAERKICHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPAKLLNFQ 870

Query: 226  TPLELLFHKRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQ 405
            +PL++LFHK P+Y  LRVF CL +P LR  N +KL  RS  CV +GY++AHKGY CL   
Sbjct: 871  SPLQVLFHKIPNYHHLRVFGCLCFPSLRPCNHHKLSYRSTACVFLGYASAHKGYICLDVS 930

Query: 406  SGRLYISRHVRFEEQTFPFK------PMQQHVPVSNPGITP 510
            + RLYISR V F E +FPF+      P+ QH P+++  I P
Sbjct: 931  TSRLYISRDVLFHESSFPFQSIPAPSPLPQHTPLTSALINP 971



 Score = 30.8 bits (68), Expect(2) = 1e-35
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCPHT 64
           F  YL   GI H+FSCPHT
Sbjct: 798 FKPYLEAHGIVHQFSCPHT 816


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  151 bits (381), Expect(2) = 1e-35
 Identities = 83/178 (46%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG+AER  RH+ + GL LL  AHMP +Y  D+F TA Y+INRLP      ++P E LFH
Sbjct: 556  QNGLAERKHRHIVDTGLTLLAHAHMPSTYWVDSFNTAVYIINRLPSRVLNYASPYEQLFH 615

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
            + P Y  L+VF C  +P LR YN++KL+ RS  CV +GYS  H+GY+C    SGR+Y+SR
Sbjct: 616  RVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLNHQGYRCFDPSSGRVYLSR 675

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPS-DTSLLLTSPF*SRSLQFPQDGAEP*SPVP 600
            HV F+E +FPF    +    SN  I  S D S+L+  P     L  P     P SP P
Sbjct: 676  HVLFDESSFPF---TEPALTSNSSIDSSTDQSILIFGP-----LSGPSPSLSP-SPSP 724



 Score = 26.6 bits (57), Expect(2) = 1e-35
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 8   FTAYLNNSGIQHRFSCP 58
           F +YL+ +GI  RFSCP
Sbjct: 535 FQSYLSTNGIFQRFSCP 551


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  146 bits (368), Expect(2) = 1e-35
 Identities = 77/154 (50%), Positives = 94/154 (61%)
 Frame = +1

Query: 70   QNGIAERIIRHVTEFGLALLFQAHMPMSY*SDAFTTACYLINRLPKFTTEQSTPLELLFH 249
            QNG AER  RH+ E GLALL Q+ MP+ Y   AF  A YLINR P  T    TPL  L  
Sbjct: 612  QNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTG 671

Query: 250  KRPDYSFLRVFDCLTYPCLRSYNTNKLEPRSVPCVLIGYSNAHKGYQCLHRQSGRLYISR 429
              PDYS LR+F C  +P LR YN +KL+ RS  CV +GYSN HKG++CL   +GR+YISR
Sbjct: 672  ATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISR 731

Query: 430  HVRFEEQTFPFKPMQQHVPVSNPGITPSDTSLLL 531
             V F+E  FPF  + +     N G+  +   LLL
Sbjct: 732  DVVFDEHVFPFASLNK-----NAGVKYTSEVLLL 760



 Score = 31.2 bits (69), Expect(2) = 1e-35
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   KKFTAYLNNSGIQHRFSCPHTH 67
           +K  A+    GI H+ SCPHTH
Sbjct: 589 EKLNAHFKTIGIHHQVSCPHTH 610