BLASTX nr result
ID: Papaver29_contig00060932
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00060932
(595 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 162 2e-37
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 160 4e-37
emb|CDP17738.1| unnamed protein product [Coffea canephora] 154 3e-35
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 140 7e-31
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 136 7e-30
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 134 5e-29
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 133 8e-29
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 133 8e-29
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 132 2e-28
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 131 2e-28
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 131 2e-28
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 131 3e-28
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 129 9e-28
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 129 9e-28
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 129 9e-28
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 129 1e-27
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 129 1e-27
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 129 2e-27
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 127 4e-27
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 126 1e-26
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 162 bits (409), Expect = 2e-37
Identities = 88/198 (44%), Positives = 120/198 (60%), Gaps = 2/198 (1%)
Frame = -1
Query: 595 DR*DLSSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTR-LQKDECAWCHDFGHWAK 419
D+ S + + L+ARGR SKS+ R + KDECA+CH+ GHW K
Sbjct: 129 DKMKTKSTTSEEALVARGRQQSQTKERRGM------SKSKGRAVAKDECAFCHEKGHWKK 182
Query: 418 DCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICP 239
DC K + +E + V K SD SD SL V+ S D W+LD+G TYH+CP
Sbjct: 183 DCPKLQKKEKVLQDANVAECK----SDVESDISLIVSLSASLYLD-EWILDSGCTYHMCP 237
Query: 238 YRDWFASFEELDGEV-RMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISL 62
RDWF F+ELDG V MGN++ C+ +GIGS++++ HDG R L++VR+VP +KKNLISL
Sbjct: 238 IRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISL 297
Query: 61 GTLEAKGYKIVAENGVLK 8
G LE+KG + +G+LK
Sbjct: 298 GALESKGLVVTMRDGILK 315
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 160 bits (406), Expect = 4e-37
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
Frame = -1
Query: 487 SKSRTRL-QKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTV 311
SKS+ R+ KDECA+CH+ GHW KDC K + +E + V K SD SD SL V
Sbjct: 158 SKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECK----SDVESDISLIV 213
Query: 310 TPSTCAITDGTWVLDTGATYHICPYRDWFASFEELDGEV-RMGNNHTCRVIGIGSVRIKM 134
+ S + D W+LD+G TYH+CP RDWF F+ELDG V MGN++ C+ +GIGS++++
Sbjct: 214 SLSASSYPD-EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRN 272
Query: 133 HDGMVRELKEVRFVPAIKKNLISLGTLEAKGYKIVAENGVLK 8
HDG R L++VR+VP +KKNLISLG LE+KG + +G+LK
Sbjct: 273 HDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILK 314
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 154 bits (389), Expect = 3e-35
Identities = 85/190 (44%), Positives = 120/190 (63%), Gaps = 1/190 (0%)
Frame = -1
Query: 571 ANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMKRKARE 392
A + L+ARGR SKS +R+ KDECA+C + GHW KDC K K +
Sbjct: 223 AADEALVARGRQQSQSKGRRGW------SKSISRVAKDECAFCREKGHWKKDCPKLKKK- 275
Query: 391 GDNNNTEVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRDWFASFE 212
+VN+A+ +SD SDFSL V+ T + W+LD+ TYH+ P R+WF FE
Sbjct: 276 -GKAPQDVNVAEC--KSDAESDFSLAVSRLTSHPDE--WILDSTCTYHMTPMREWFFEFE 330
Query: 211 ELDGE-VRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGTLEAKGYK 35
ELDG V MGN++ C+ +GIGS++++ HDG R LK+VR+VP +K++LISLG LE+KG +
Sbjct: 331 ELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLE 390
Query: 34 IVAENGVLKV 5
+ +G+LKV
Sbjct: 391 VRMRDGILKV 400
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 140 bits (352), Expect = 7e-31
Identities = 80/204 (39%), Positives = 113/204 (55%), Gaps = 13/204 (6%)
Frame = -1
Query: 577 SEANSDLLLARGR----STDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCM 410
S + + L+ RGR +TD RSKSR R + C +C GH DC
Sbjct: 135 SNSQPESLVVRGRQQEKNTDNKSRDKSSSGYRGRSKSRGRYKS--CKYCKRGGHDISDCW 192
Query: 409 KRKAREGDNNNTEVNIAKGNDE--------SDDASDFSLTVTPSTCAITDGTWVLDTGAT 254
K + +E N + KG E +D+ D L V + C T W+LDTG T
Sbjct: 193 KLQNKEKHKGNYK---PKGKQEEQGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCT 249
Query: 253 YHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKK 77
YH+CP RDWF ++E + G V MG+N C+V G+G+++IKM DG +R L +VR +P++K+
Sbjct: 250 YHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKR 309
Query: 76 NLISLGTLEAKGYKIVAENGVLKV 5
NLISL TL+ KGY+ +G+LKV
Sbjct: 310 NLISLSTLDRKGYRYSGGDGILKV 333
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 136 bits (343), Expect = 7e-30
Identities = 79/199 (39%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Frame = -1
Query: 577 SEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDE----CAWCHDFGHWAKDCM 410
S +SD L RGRS D R +S+++ C +CH GH +C
Sbjct: 190 SSNSSDGLFVRGRSNDVASTYQGGNGGKNRGRSKSKKPNSNKHKTCNYCHLKGHIKSECY 249
Query: 409 KRKAREGDNNNTEVNIAKGND--ESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPY 236
K K ++ ++ KG + S D S ++ W++D+G ++H+ PY
Sbjct: 250 KLKNKQSGDSKPR----KGKEPMNSADVSYVDFDSESGALDVSKSEWIMDSGCSFHVTPY 305
Query: 235 RDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLG 59
+D F S+EE +G V MGNN TC+V+GIGSV I M DG VR L +VR VP +KKNLISLG
Sbjct: 306 KDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGTVRTLSKVRHVPEMKKNLISLG 365
Query: 58 TLEAKGYKIVAENGVLKVI 2
TL+ G K +AE GVL VI
Sbjct: 366 TLDNNGCKYIAEGGVLNVI 384
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 134 bits (336), Expect = 5e-29
Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 13/204 (6%)
Frame = -1
Query: 577 SEANSDLLLARGR----STDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCM 410
S + ++ L+ RGR +T+ RSKSR R + C +C GH +C
Sbjct: 102 SNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKS--CKYCKRDGHDISECW 159
Query: 409 KRKAREGDNNNTEVNIAKGNDE--------SDDASDFSLTVTPSTCAITDGTWVLDTGAT 254
K + ++ T I KG E +D+ SD L V + CA T W+LDT T
Sbjct: 160 KLQDKD---KRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACT 216
Query: 253 YHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKK 77
YH+CP RDWFA++E + G V MG++ C V GIG+V+IKM DG +R L +VR +P +K+
Sbjct: 217 YHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKR 276
Query: 76 NLISLGTLEAKGYKIVAENGVLKV 5
+LISL TL+ KGYK +G+LKV
Sbjct: 277 SLISLCTLDRKGYKYSGGDGILKV 300
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 133 bits (334), Expect = 8e-29
Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 13/204 (6%)
Frame = -1
Query: 577 SEANSDLLLARGR----STDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCM 410
S + ++ L+ RGR +T RSKSR R + C +C GH +C
Sbjct: 228 SNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKS--CKYCKRDGHDISECW 285
Query: 409 KRKAREGDNNNTEVNIAKGNDE--------SDDASDFSLTVTPSTCAITDGTWVLDTGAT 254
K + ++ T I KG E +D+ SD L V + CA T W+LDT T
Sbjct: 286 KLQDKD---KRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWT 342
Query: 253 YHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKK 77
YH+CP RDWFA++E L G V MG++ C V GIG+V+IKM DG +R L +VR +P +K+
Sbjct: 343 YHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKR 402
Query: 76 NLISLGTLEAKGYKIVAENGVLKV 5
+LISL TL+ KGYK +G+LKV
Sbjct: 403 SLISLCTLDRKGYKYSGGDGILKV 426
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 133 bits (334), Expect = 8e-29
Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 13/204 (6%)
Frame = -1
Query: 577 SEANSDLLLARGR----STDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCM 410
S + ++ L+ RGR +T RSKSR R + C +C GH +C
Sbjct: 228 SNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKS--CKYCKRDGHDISECW 285
Query: 409 KRKAREGDNNNTEVNIAKGNDE--------SDDASDFSLTVTPSTCAITDGTWVLDTGAT 254
K + ++ T I KG E +D+ SD L V + CA T W+LDT T
Sbjct: 286 KLQDKD---KRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWT 342
Query: 253 YHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKK 77
YH+CP RDWFA++E L G V MG++ C V GIG+V+IKM DG +R L +VR +P +K+
Sbjct: 343 YHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKR 402
Query: 76 NLISLGTLEAKGYKIVAENGVLKV 5
+LISL TL+ KGYK +G+LKV
Sbjct: 403 SLISLCTLDRKGYKYSGGDGILKV 426
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 132 bits (331), Expect = 2e-28
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 13/205 (6%)
Frame = -1
Query: 577 SEANSDLLLARGR----STDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCM 410
S + ++ L+ RGR +T RSKSR R + C +C GH +C
Sbjct: 135 SNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRYKS--CKYCKRDGHDISECW 192
Query: 409 KRKAREGDNNNTEVNIAKGNDE--------SDDASDFSLTVTPSTCAITDGTWVLDTGAT 254
K + ++ T I KG E +D+ SD L V + CA T W+LDT T
Sbjct: 193 KLQDKD---KRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACT 249
Query: 253 YHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKK 77
YH+CP RDWFA++E + G V MG++ C V GIG V+IKM DG +R L +VR P +K+
Sbjct: 250 YHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKR 309
Query: 76 NLISLGTLEAKGYKIVAENGVLKVI 2
+LISL TL+ KGYK +G+LK+I
Sbjct: 310 SLISLRTLDRKGYKYSGGDGILKLI 334
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 131 bits (330), Expect = 2e-28
Identities = 71/169 (42%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Frame = -1
Query: 484 KSRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDE--------SDDAS 329
+S++R + C +C GH C K + ++ T I KG E +D+ S
Sbjct: 43 RSKSRGRYKSCKYCKRDGHDISKCWKLQDKD---KRTGKYIPKGKKEDEGKAAVVTDEKS 99
Query: 328 DFSLTVTPSTCAITDGTWVLDTGATYHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIG 152
D L V + CA T W+LDT TYH+CP RDWFA++E + G V MG++ C V GIG
Sbjct: 100 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 159
Query: 151 SVRIKMHDGMVRELKEVRFVPAIKKNLISLGTLEAKGYKIVAENGVLKV 5
+V+IKM DG +R L +VR +P +K++LISL TL+ KGYK +G+LKV
Sbjct: 160 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKV 208
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 131 bits (330), Expect = 2e-28
Identities = 71/169 (42%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Frame = -1
Query: 484 KSRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDE--------SDDAS 329
+S++R + C +C GH C K + ++ T I KG E +D+ S
Sbjct: 211 RSKSRGRYKSCKYCKRDGHDISKCWKLQDKD---KRTGKYIPKGKKEDEGKAAVVTDEKS 267
Query: 328 DFSLTVTPSTCAITDGTWVLDTGATYHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIG 152
D L V + CA T W+LDT TYH+CP RDWFA++E + G V MG++ C V GIG
Sbjct: 268 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 327
Query: 151 SVRIKMHDGMVRELKEVRFVPAIKKNLISLGTLEAKGYKIVAENGVLKV 5
+V+IKM DG +R L +VR +P +K++LISL TL+ KGYK +G+LKV
Sbjct: 328 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKV 376
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 131 bits (329), Expect = 3e-28
Identities = 71/169 (42%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Frame = -1
Query: 484 KSRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDE--------SDDAS 329
+S++R + C +C GH C K + ++ T I KG E +D+ S
Sbjct: 226 RSKSRGRYKSCKYCKRDGHDISKCWKLQDKD---KRTGKYIPKGKKEEEGKAAVVTDEKS 282
Query: 328 DFSLTVTPSTCAITDGTWVLDTGATYHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIG 152
D L V + CA T W+LDT TYH+CP RDWFA++E + G V MG++ C V GIG
Sbjct: 283 DAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIG 342
Query: 151 SVRIKMHDGMVRELKEVRFVPAIKKNLISLGTLEAKGYKIVAENGVLKV 5
+V+IKM DG +R L +VR +P +K++LISL TL+ KGYK +G+LKV
Sbjct: 343 TVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKV 391
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 129 bits (325), Expect = 9e-28
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Frame = -1
Query: 586 DLSSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMK 407
D SS + + L RGR T+ RSKS+ K C +C H +C K
Sbjct: 189 DGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKK 247
Query: 406 RKAREGDNNNT-EVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRD 230
+A+E N +V++A DD+ D V + C W+LD+ ++HIC R+
Sbjct: 248 VQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDSACSFHICTKRN 305
Query: 229 WFASFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGT 56
WF+S++ + VRMG+++ C ++GIGSV+IK DGM R LK VR++P + +NLISL T
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 55 LEAKGYKIVAENGVLKV 5
L+A+GYK +GVLKV
Sbjct: 366 LDAEGYKYSGSDGVLKV 382
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 129 bits (325), Expect = 9e-28
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Frame = -1
Query: 586 DLSSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMK 407
D SS + + L RGR T+ RSKS+ K C +C H +C K
Sbjct: 189 DGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKK 247
Query: 406 RKAREGDNNNT-EVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRD 230
+A+E N +V++A DD+ D V + C W+LD+ ++HIC R+
Sbjct: 248 VQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDSACSFHICTKRN 305
Query: 229 WFASFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGT 56
WF+S++ + VRMG+++ C ++GIGSV+IK DGM R LK VR++P + +NLISL T
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 55 LEAKGYKIVAENGVLKV 5
L+A+GYK +GVLKV
Sbjct: 366 LDAEGYKYSGSDGVLKV 382
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 129 bits (325), Expect = 9e-28
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Frame = -1
Query: 586 DLSSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMK 407
D SS + + L RGR T+ RSKS+ K C +C H +C K
Sbjct: 189 DGSSSSKGEALHVRGR-TENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKK 247
Query: 406 RKAREGDNNNT-EVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRD 230
+A+E N +V++A DD+ D V + C W+LD+ ++HIC R+
Sbjct: 248 VQAKERKNKKDGKVSVASAAASDDDSGD--CLVVFAGCVAGHDEWILDSACSFHICTKRN 305
Query: 229 WFASFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGT 56
WF+S++ + VRMG+++ C ++GIGSV+IK DGM R LK VR++P + +NLISL T
Sbjct: 306 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 365
Query: 55 LEAKGYKIVAENGVLKV 5
L+A+GYK +GVLKV
Sbjct: 366 LDAEGYKYSGSDGVLKV 382
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 129 bits (324), Expect = 1e-27
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
Frame = -1
Query: 460 DECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTVTPSTCAITDG 281
D C +C + GHW DC K+K + + V+ A ++++ D +L T
Sbjct: 223 DVCNYCKEKGHWKFDCPKKKKQ---SEKQSVSAAVAEEDTNSEEDIALVADEHTHH--SD 277
Query: 280 TWVLDTGATYHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVRIKMHDGMVRELKE 104
WVLD+GA+YHICP R+WF ++E++DG + M N+ C+V+G GS++I+ HDG L E
Sbjct: 278 VWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNE 337
Query: 103 VRFVPAIKKNLISLGTLEAKGYKIVAENGVLKV 5
VR VP + KNLISL L++KG+ ++GVL+V
Sbjct: 338 VRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRV 370
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 129 bits (324), Expect = 1e-27
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Frame = -1
Query: 586 DLSSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMK 407
D SS + + L RGR T+ RSKS+ K C +C H +C K
Sbjct: 191 DGSSSSKGEALHVRGR-TENKTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNHNIDECKK 249
Query: 406 RKAREGDNNNT-EVNIAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRD 230
+A+E N +V++A DD+ D V + C W+LD+ ++HIC R+
Sbjct: 250 VQAKERKNKKDGKVSVASAAVSDDDSGD--CLVVFAGCVAGHDEWILDSACSFHICTKRN 307
Query: 229 WFASFEELD--GEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGT 56
WF+S++ + VRMG+++ C ++GIGSV+IK DGM R LK VR++P + +NLISL T
Sbjct: 308 WFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLST 367
Query: 55 LEAKGYKIVAENGVLKV 5
L+A+GYK +GVLKV
Sbjct: 368 LDAEGYKYSGSDGVLKV 384
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 129 bits (323), Expect = 2e-27
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 5/166 (3%)
Frame = -1
Query: 487 SKSRTRLQKD----ECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFS 320
SKS+++ +KD +C C+ G + C R+ E + + A +D D +
Sbjct: 111 SKSKSKGKKDYRNVKCYHCNKIGQIRRICPDRQQEE--KTQAQGSAAIIDDGYDSTEVLT 168
Query: 319 LTVTPSTCAITDGTWVLDTGATYHICPYRDWFASFEELDG-EVRMGNNHTCRVIGIGSVR 143
+ + P+ WVLD+G TYH+CP RDWF+S++E++G ++ +GNN +C V+GIG++
Sbjct: 169 IRLNPN-----HEEWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMA 223
Query: 142 IKMHDGMVRELKEVRFVPAIKKNLISLGTLEAKGYKIVAENGVLKV 5
I MHDG R LKEVR VP +K+NLISLGTL+ GY A+NG L +
Sbjct: 224 INMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTI 269
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 127 bits (319), Expect = 4e-27
Identities = 73/198 (36%), Positives = 114/198 (57%), Gaps = 5/198 (2%)
Frame = -1
Query: 580 SSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMKRK 401
SS+ L + RGRST+ SKSR R +C C GH K+C K
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGR---SKSR-RKNNIKCYGCGMKGHVKKECWNNK 247
Query: 400 AREGDNNNTEVN----IAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYR 233
+ G+ N+ +A +D+ + + T + + D W++D+GAT+H+ P+R
Sbjct: 248 -KNGEKNSEATTSQGCVASTSDDGEILYSEAATSSEGERQLND-VWIMDSGATWHMTPHR 305
Query: 232 DWFASFEEL-DGEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGT 56
DWF S+E + +G V MGN+H + G+G++R+KMHDG VR+++ VR V +KKNL+S+G
Sbjct: 306 DWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQ 365
Query: 55 LEAKGYKIVAENGVLKVI 2
L+ G KI +E+G+LKV+
Sbjct: 366 LDDLGCKIHSESGILKVV 383
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 126 bits (316), Expect = 1e-26
Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Frame = -1
Query: 580 SSEANSDLLLARGRSTDXXXXXXXXXXXXXRSKSRTRLQKDECAWCHDFGHWAKDCMKRK 401
SS+ L + RGRST+ SKSR R + +C C GH K+C K
Sbjct: 192 SSKQAEALTMTRGRSTERGPSGSQNHGR---SKSR-RKKNIKCYGCGMKGHVKKECWNIK 247
Query: 400 AREGDNNNTEVN---IAKGNDESDDASDFSLTVTPSTCAITDGTWVLDTGATYHICPYRD 230
N+ + +A +D+ + + T + + D W++D+GAT+H+ P+RD
Sbjct: 248 KNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLND-VWIMDSGATWHMTPHRD 306
Query: 229 WFASFEEL-DGEVRMGNNHTCRVIGIGSVRIKMHDGMVRELKEVRFVPAIKKNLISLGTL 53
WF S+E + +G V MGN+H + G+G++R+KMHDG VR+++ VR V +KKNL+S+G L
Sbjct: 307 WFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQL 366
Query: 52 EAKGYKIVAENGVLKVI 2
+ G KI E+G+LKV+
Sbjct: 367 DDLGCKIHTESGILKVV 383