BLASTX nr result
ID: Papaver29_contig00060667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00060667
(829 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A... 120 5e-28
ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A... 121 1e-27
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438... 119 2e-27
ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433... 117 1e-26
ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein A... 116 1e-26
ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444... 113 4e-25
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418... 110 8e-25
ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein A... 110 1e-24
ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422... 106 1e-23
ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409... 108 5e-23
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A... 102 2e-22
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A... 103 3e-22
ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425... 103 3e-22
ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430... 104 3e-22
ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411... 105 5e-22
ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420... 105 9e-22
ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein A... 98 6e-21
ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein A... 97 1e-17
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 96 2e-17
ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373... 95 5e-17
>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 805
Score = 120 bits (302), Expect(2) = 5e-28
Identities = 75/236 (31%), Positives = 124/236 (52%), Gaps = 13/236 (5%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 204 KLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRXLSRCARNFIWSGDVTSK 263
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK----*HGGMGKIFSS*VQE 462
K + + W +IC+P EGG+G + G+LN T L L I+ +
Sbjct: 264 KXVTVSWXQICAPKNEGGLGLRDL-----GSLNTTALLKLGWLIITTDSPWSIYJRXRFK 318
Query: 461 *KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNN 285
GR+ +SSIW GIK + + + RW++GNG+ S+W D W+ + V
Sbjct: 319 LHGRLYSCSYMRSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATE 378
Query: 284 AYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPV-LNGGEDRRIWK 141
+ KV+ +I G+WVIPS +L K ++ E+P+ ++ +D IW+
Sbjct: 379 IAPS-LSRTKVSNIIXMGQWVIPSIFSSTFPDLTK--EILEMPLPIDEDKDVLIWE 431
Score = 32.0 bits (71), Expect(2) = 5e-28
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 436 GGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 479
>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 1048
Score = 121 bits (304), Expect(2) = 1e-27
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 27/250 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 447 KLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSK 506
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + W +IC+P EGG+G + G+LN T L E K
Sbjct: 507 KSVTVSWRQICAPKNEGGLGLRDL-----GSLNTTALLKLGWLIITTDSPWSIYLRERFK 561
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + +SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 562 LH---GRLYSCSYK-----------RSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDK 607
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPV-L 171
W+ + V + KV+ +I G+WVIPS +L K ++ E+P+ +
Sbjct: 608 WLDKPIVDVVGATEIAPS-LSXTKVSNIIRMGKWVIPSIFSSTFPDLTK--EILEMPLPI 664
Query: 170 NGGEDRRIWK 141
+ +D IW+
Sbjct: 665 DEDKDVLIWE 674
Score = 30.0 bits (66), Expect(2) = 1e-27
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R F W + +W + P VWK+ N
Sbjct: 679 GVFSFSDGYEIVRHXFPVKSWASIIWRPFIPPRYSILVWKILFN 722
>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
Length = 1384
Score = 119 bits (298), Expect(2) = 2e-27
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 27/250 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 783 KLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + W +IC+P EGG+G + G+LN T L E K
Sbjct: 843 KSVTVSWRQICAPKNEGGLGLRDL-----GSLNTTXLLKJGWLIITTDSPWSIYLRERFK 897
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 898 LH---GRLYSCSYK-----------XSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDK 943
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPV-L 171
W+ + V + KV+ +I G+WVIPS +L K ++ E+P+ +
Sbjct: 944 WLDKPIVDVVGATEIAPS-LSCTKVSNIIRMGKWVIPSIFSSTFPDLTK--EILEMPLPI 1000
Query: 170 NGGEDRRIWK 141
+ +D IW+
Sbjct: 1001 DEDKDVLIWE 1010
Score = 31.2 bits (69), Expect(2) = 2e-27
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 1015 GVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 1058
>ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433498 [Malus domestica]
Length = 1384
Score = 117 bits (292), Expect(2) = 1e-26
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 783 KLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRXLSRCARNFIWSGDVTSK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + W +IC+P EGG+G + G+LN L E K
Sbjct: 843 KXVTVSWRQICAPKNEGGLGLRDL-----GSLNTXALLKLGWLIITTDSPWSIYLRERFK 897
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + +SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 898 LH---GRLYSCSYK-----------RSSIWPGIKSIJHILFQNCRWVIGNGSTTSLWVDK 943
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIP-------SELMKLIDVNELPV-L 171
W+ + V + KV+ +I G WVIP +L K ++ E+P+ +
Sbjct: 944 WLDKPIVDVVGATEIAXS-LSRTKVSNIIRMGXWVIPXIFSSTFPDLTK--EILEMPLPI 1000
Query: 170 NGGEDRRIWK 141
+ +D IW+
Sbjct: 1001 DEDKDVLIWE 1010
Score = 31.2 bits (69), Expect(2) = 1e-26
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 1015 GVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 1058
>ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 715
Score = 116 bits (290), Expect(2) = 1e-26
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 114 KLTGWXGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSK 173
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + W +IC+P EGG+G + G+LN T L E K
Sbjct: 174 KSVTVSWRQICAPKNEGGLGLRDL-----GSLNTTALLKLGXLIITXDSPWSIYLRERFK 228
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 229 LH---GRLYSCSYK-----------XSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDK 274
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIPSELMKLI-----DVNELPV-LNG 165
W+ V + KV+ +I +WVIPS ++ E+P+ ++
Sbjct: 275 WLDKPIXDVVGATEIAXS-LSRTKVSNIIRMXKWVIPSXFSSTFXXLTXEILEMPLPIDE 333
Query: 164 GEDRRIWK 141
+D IW+
Sbjct: 334 DKDVLIWE 341
Score = 32.0 bits (71), Expect(2) = 1e-26
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 346 GVFSFSDGYEIVRHRFPVKSWASXIWRPFIPPRYSILVWKILFN 389
>ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444619 [Malus domestica]
Length = 1183
Score = 113 bits (283), Expect(2) = 4e-25
Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 15/238 (6%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 650 KLTGWXGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRXLSRCARNFIWSGDVTSK 709
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK*HGGM-------GKIFSS* 471
K + + W +IC+ EGG+G + G+LN T L L G + I+
Sbjct: 710 KXVTVSWXQICAXKNEGGLGLRDL-----GSLNXTXLLKL---GXLIITTDSPWSIYJXX 761
Query: 470 VQE*KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQH 294
+ GR+ +SSIW GIK + + RW++GNG+ S+W D W+ + V
Sbjct: 762 RFKLHGRLYSCSYXRSSIWPGIKSILHILFXNCRWVIGNGSTTSLWVDKWLDXPIVDVXG 821
Query: 293 PNNAYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPVLNGGEDRRIWK 141
+ KV+ +I G WVIPS +L K I LP+ + +D IW+
Sbjct: 822 ATEIAXS-LSXTKVSNIIRMGXWVIPSIFSXXFPDLTKEILXMPLPI-DEDKDVLIWE 877
Score = 29.3 bits (64), Expect(2) = 4e-25
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R F W + W + P VWK+ N
Sbjct: 882 GVFSFSDGYEIVRHXFPVKSWASIXWRPFIPPRYSIXVWKILFN 925
>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
Length = 1384
Score = 110 bits (276), Expect(2) = 8e-25
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+ D + +
Sbjct: 783 KLTGWKGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSXDVTXK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + +IC+P EGG+G + G+LN L E K
Sbjct: 843 KSVTVSXRQICAPKBEGGLGLRDL-----GSLNTXALLKLGWLIITTDSPWSIYLRERFK 897
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + +SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 898 LH---GRLYSCSYK-----------RSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDK 943
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIP-------SELMKLIDVNELPVLN 168
W+ + V + KV+ +I G+WVIP +L K I LP+ +
Sbjct: 944 WLDXPIVDVVGATEIAXS-LSRTKVSNIIRMGKWVIPXXFSSTFPDLTKXILEMPLPI-D 1001
Query: 167 GGEDRRIWK 141
+D IW+
Sbjct: 1002 EDKDVLIWE 1010
Score = 31.2 bits (69), Expect(2) = 8e-25
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 1015 GVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 1058
>ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 899
Score = 110 bits (274), Expect(2) = 1e-24
Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWKGKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 298 KLTGWKGKLLSMXGRVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSGDVTXK 357
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETIL-------------------EDLK 507
K + + W +IC+ E G+G + G+LN L E K
Sbjct: 358 KXVTVSWRQICAXKNEXGLGLRDL-----GSLNTXALLKLGWLIITTDSPWSIYLRERFK 412
Query: 506 *HGGMGKIFSS*VQE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDN 327
H G+++S + +SSIW GIK + + + RW++GNG+ S+W D
Sbjct: 413 LH---GRLYSCSYK-----------RSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDK 458
Query: 326 WIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIPSELMKLI-----DVNELPV-LNG 165
W+ + V + KV+ +I +WVIPS ++ E+P+ ++
Sbjct: 459 WLDXPIVDVVGATEIAPS-LSRTKVSNIIRMXKWVIPSIFSSTFPDLTXEILEMPLPIDE 517
Query: 164 GEDRRIWK 141
+D IW+
Sbjct: 518 DKDVLIWE 525
Score = 31.2 bits (69), Expect(2) = 1e-24
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 530 GVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 573
>ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422573 [Malus domestica]
Length = 1419
Score = 106 bits (264), Expect(2) = 1e-23
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GWK KL+S RV L + V S+ +++ +Y+WP +++ R RNF+W+G + +
Sbjct: 783 KLTGWKXKLLSMXGRVQLTQSVFQSMLLHSFXVYKWPSSLLRXLSRCARNFIWSGXVTSK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK----*HGGMGKIFSS*VQE 462
+ + W +IC+ EGG+G + G+LN T L L I+ +
Sbjct: 843 XXVTVSWXQICAXKNEGGLGLRDL-----GSLNTTALLKLGWLIITTDSPWSIYJRXRFK 897
Query: 461 *KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNN 285
GR+ +SSIW GIK + + + RW++GNG+ S+W D W+ + V
Sbjct: 898 LHGRLYSCSYXRSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATX 957
Query: 284 AYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPV-LNGGEDRRIWK 141
+ KV+ +I G WVIPS +L K ++ E+P+ ++ +D IW+
Sbjct: 958 IAPS-XSRTKVSNIIXMGXWVIPSIFSXXFPDLTK--EILEMPLPIDEDKDVLIWE 1010
Score = 31.6 bits (70), Expect(2) = 1e-23
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 1015 GXFSFSDGYEIVRHRFPVKSWASIIWXPFIPPRYSILVWKILFN 1058
>ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409892 [Malus domestica]
Length = 1251
Score = 108 bits (270), Expect(2) = 5e-23
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 12/235 (5%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + V S+ +++ S+Y+WP +++ R RNF+W+G + +
Sbjct: 650 KLTGWXGKLLSMAGRVQLTQSVFQSMLLHSFSVYKWPSSLLRXLSRCARNFIWSGXVTSK 709
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK----*HGGMGKIFSS*VQE 462
K + W +IC+P EGG+G + G LN T L L I+ +
Sbjct: 710 KXVTXSWXQICAPKNEGGLGLRDL-----GXLNXTALLKLGWLIITTDSPWSIYJRXRFK 764
Query: 461 *KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNN 285
GR+ +SSIW GIK + + + RW++GNG S+W W+ V
Sbjct: 765 LHGRLYSCSYXRSSIWPGIKSILHILFQXCRWVIGNGXTTSLWVXKWLDKPIXDVXGATX 824
Query: 284 AYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPVLNGGEDRRIWK 141
+ KV+ +I G WVIPS +L K I LP+ + +D IW+
Sbjct: 825 IAXS-XSRTKVSNIIRMGXWVIPSIFSXXFXDLTKEILXMPLPI-DEDKDVLIWE 877
Score = 27.3 bits (59), Expect(2) = 5e-23
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F + +W + P VWK+ N
Sbjct: 882 GXFSFSDGYEIVRHRFPVKSXASIIWRPFIPPRYSILVWKILFN 925
>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 102 bits (253), Expect(2) = 2e-22
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Frame = -3
Query: 767 RVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQRKQIVLKWNKICSPI 588
RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +K + + W +IC+P
Sbjct: 4 RVQLTQSVFQSMLLHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSKKSVTVSWRQICAPK 63
Query: 587 KEGGIGNKKFEGYK*GTLNETIL-------------------EDLK*HGGMGKIFSS*VQ 465
EGG+G + G+LN T L E K H G+++S +
Sbjct: 64 NEGGLGLRDL-----GSLNXTALLKLGWLIITTDSPXSIYLRERFKLH---GRLYSCSYK 115
Query: 464 E*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNN 285
+SSIW GIK + + + RW++GNG+ S+W D W+ + V
Sbjct: 116 -----------RSSIWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATE 164
Query: 284 AYMNRFPEMKVAYLILDGEWVIPSELMKLI-----DVNELPV-LNGGEDRRIWK 141
+ KV+ +I +WVIPS ++ E+P+ ++ +D IW+
Sbjct: 165 IAPS-LSRTKVSNIIRMXKWVIPSFFXSTFPDLTNEILEMPLPIDEDKDVLIWE 217
Score = 32.0 bits (71), Expect(2) = 2e-22
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 222 GVFSFSDGYEIVRHRFPVKSWASTIWRPFIPPRYSILVWKILFN 265
>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 103 bits (258), Expect(2) = 3e-22
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 13/222 (5%)
Frame = -3
Query: 767 RVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQRKQIVLKWNKICSPI 588
RV L + V S+ +++ S+Y+WP +++ R RNF+W+GD + +K + + W++IC+P
Sbjct: 4 RVQLTQSVFQSMLLHSFSVYKWPSSLLRSLSRCARNFIWSGDVTSKKLVTVSWHQICAPK 63
Query: 587 KEGGIGNKKFEGYK*GTLNETILEDLK----*HGGMGKIFSS*VQE*KGRM-DLLL*KSS 423
EGG+G + G+LN T L L I+ + GR+ +SS
Sbjct: 64 NEGGLGLRDL-----GSLNXTALLKLGWLIITTDSPWSIYIRKRFKLHGRLYSCSYMRSS 118
Query: 422 IWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNNAYMNRFPEMKVAYL 243
IW GIK + + + RW++GNG+ S+W D W+ + V + KV+ +
Sbjct: 119 IWPGIKSILHILFQNCRWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPS-LSRTKVSNI 177
Query: 242 ILDGEWVIPS-------ELMKLIDVNELPV-LNGGEDRRIWK 141
I G+WVIPS +L K ++ E+P+ ++ +D IW+
Sbjct: 178 IRMGQWVIPSIFSSTFPDLTK--EILEMPLPIDEDKDVLIWE 217
Score = 29.6 bits (65), Expect(2) = 3e-22
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VW + N
Sbjct: 222 GGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWXILFN 265
>ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425857 [Malus domestica]
Length = 1384
Score = 103 bits (256), Expect(2) = 3e-22
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 16/239 (6%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + V S+ +++ S+ +WP +++ R RNF+W+ D + +
Sbjct: 783 KLTGWXGKLLSMAGRVQLTQSVFQSMLLHSFSVXKWPSSLLRXLSRCARNFIWSXDVTSK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK*HGGM-------GKIFSS* 471
K + + +IC+ EGG+G + G+LN T L L G + I+
Sbjct: 843 KXVTVSXRQICAXKNEGGLGLRDL-----GSLNTTALLKL---GXLIITTDSPWSIYLXX 894
Query: 470 VQE*KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQH 294
+ GR+ +SSIW GIK + + RW++GNG+ S+W D W+ + V
Sbjct: 895 RFKLHGRLYSCSYKRSSIWXGIKSILHILFXNCRWVIGNGSTTSLWVDKWLDXPIVDVVG 954
Query: 293 PNNAYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPV-LNGGEDRRIWK 141
+ KV+ +I G WVIPS +L K ++ E+P+ ++ +D IW+
Sbjct: 955 ATEIAXS-LSRTKVSNIIRMGXWVIPSIFSSTFPDLTK--EILEMPLPIDEDKDVLIWE 1010
Score = 30.0 bits (66), Expect(2) = 3e-22
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -2
Query: 126 FSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
FS + + +R +F W + +W + P VWK+ N
Sbjct: 1017 FSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 1058
>ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430323 [Malus domestica]
Length = 1380
Score = 104 bits (259), Expect(2) = 3e-22
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Frame = -3
Query: 827 VEMMQDRLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWT 648
V+ + RL GWKGKL S R LV+ V SL +++ S+Y+ P +K RNF+W+
Sbjct: 777 VDKAKARLSGWKGKLXSMAGRFQLVQSVYQSLXLHSFSVYQLPSCXLKHLSACARNFIWS 836
Query: 647 GDPSQRKQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK*HGGMGKIFSS*V 468
GD S RK + + W+ + P KEGG+G + L + L+ + G
Sbjct: 837 GDLSSRKLVTVDWSMVXGPKKEGGLGLRDLAXLNLTALLSFGWDALQSYSLWGSFAXQRF 896
Query: 467 QE*KGRMDLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPN 288
R + +SS W G+K +N +RW++G+G +S W D W+ + +
Sbjct: 897 PLSPYRNQNIYLRSSXWHGLKRALPILNNNSRWIIGDGRXVSFWFDKWLDEPIISXSLFS 956
Query: 287 NAYMNRFPEMKVAYLILDGEWVIPSELMKLI-----DVNELPV-LNGGEDRRIWK 141
P +V+ +I W +P L + LP+ LN D+ IW+
Sbjct: 957 VISPKVLP--RVSDVIEAQSWSLPDYFSNLFPSIVQQILRLPLPLNXXXDKLIWE 1009
Score = 28.9 bits (63), Expect(2) = 3e-22
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKL 10
G FS +S IR + S W +W + P + W+L
Sbjct: 1014 GKFSFSSGYHLIRXRHSDCAWAKVIWQHFIPPRLSILAWRL 1054
>ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411380 [Malus domestica]
Length = 1384
Score = 105 bits (261), Expect(2) = 5e-22
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + V S+ ++ S+Y+WP +++ R RNF+W+GD + +
Sbjct: 783 KLTGWXGKLLSMAGRVQLTQSVFQSMLLHXFSVYKWPSSLLRXXSRCARNFIWSGDVTSK 842
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK----*HGGMGKIFSS*VQE 462
K + + W +IC+ E G+G + G+LN T L L I+ +
Sbjct: 843 KXVTVSWRQICAXKNEXGLGLRDL-----GSLNXTALLKLGXLIITXDSPWXIYJRXRFK 897
Query: 461 *KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNN 285
GR+ +SSIW GIK + + RW++GNG S+W W+ V
Sbjct: 898 LHGRLYSCSYXRSSIWXGIKSIJHILFXNCRWVIGNGXTTSLWVXKWLDXPIXDVXGATE 957
Query: 284 AYMNRFPEMKVAYLILDGEWVIPSELMKLI-----DVNELPV-LNGGEDRRIWK 141
+ KV+ +I G WVIPS + E+P+ ++ +D IW+
Sbjct: 958 IAXS-LSXTKVSNIIRMGXWVIPSXFSSTFXXLTXXILEMPLPIDEDKDVLIWE 1010
Score = 27.3 bits (59), Expect(2) = 5e-22
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = -2
Query: 126 FSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKL 10
FS + + +R F W + +W + P VWK+
Sbjct: 1017 FSFSDGYEXVRHXFPVKSWASXIWXPFIPPRYSILVWKI 1055
>ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420255 [Malus domestica]
Length = 1251
Score = 105 bits (262), Expect(2) = 9e-22
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 15/238 (6%)
Frame = -3
Query: 809 RLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWTGDPSQR 630
+L GW GKL+S RV L + S+ +++ S+Y+WP +++ R RNF+W+ + +
Sbjct: 650 KLTGWXGKLLSMAGRVQLTQSXXQSMLLHSFSVYKWPSSLLRXLSRCARNFIWSXXVTSK 709
Query: 629 KQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK*HGGM-------GKIFSS* 471
K + + W +IC+ EGG+G + G LN T L L G + I+
Sbjct: 710 KXVTVSWXQICAXKNEGGLGLRDL-----GXLNXTXLLKL---GXLIITTDSPWSIYJRX 761
Query: 470 VQE*KGRM-DLLL*KSSIWKGIKWVQEDVNEGTRWLVGNGANLSVWNDNWIRSTTLGVQH 294
+ GR+ +SSIW GIK + + RW++GNG+ S+W D W+ + V
Sbjct: 762 RFKLHGRLYSCSYXRSSIWPGIKSILHILFXNCRWVIGNGSTTSLWVDKWLDKPIVDVXG 821
Query: 293 PNNAYMNRFPEMKVAYLILDGEWVIPS-------ELMKLIDVNELPVLNGGEDRRIWK 141
+ KV+ +I G WVIPS +L K I LP+ + +D IW+
Sbjct: 822 ATXIAXS-XSRTKVSNIIRMGXWVIPSIFSXXFXDLTKEILXMPLPI-DEDKDVLIWE 877
Score = 26.2 bits (56), Expect(2) = 9e-22
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R F + +W + P VWK+ N
Sbjct: 882 GXFSFSDGYEIVRHXFPVKSXASIIWRPFIPPRYSILVWKILFN 925
>ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 577
Score = 97.8 bits (242), Expect(2) = 6e-21
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Frame = -3
Query: 728 IYNMSIYRWPKRVIKECERIIRNFLWTGDPSQRKQIVLKWNKICSPIKEGGIGNKKFEGY 549
+++ S+Y+WP +++ R RNF+W+GD + +K + + W++IC+P EGG+G +
Sbjct: 3 LHSFSVYKWPSSLLRSLSRYARNFIWSGDVTSKKLVTVSWHQICAPKNEGGLGLRDL--- 59
Query: 548 K*GTLNETILEDLK----*HGGMGKIFSS*VQE*KGRM-DLLL*KSSIWKGIKWVQEDVN 384
G+LN T L L I+ + GR+ +SSIW GIK + +
Sbjct: 60 --GSLNTTALLKLGWLIITTDSPWSIYLRXRFKLHGRLYSCSYKRSSIWPGIKSILHILF 117
Query: 383 EGTRWLVGNGANLSVWNDNWIRSTTLGVQHPNNAYMNRFPEMKVAYLILDGEWVIPS--- 213
+ RW++GNG+ S+W D W+ + V + KV+ +I G WVIPS
Sbjct: 118 QNCRWVIGNGSTTSLWVDKWLDKPIVDVXGATEIAXS-LSRTKVSNIIRMGXWVIPSIFS 176
Query: 212 ----ELMKLIDVNELPVLNGGEDRRIWK 141
+L K I LP+ + +D IW+
Sbjct: 177 STFPDLTKEILXMPLPI-DEDKDVLIWE 203
Score = 31.2 bits (69), Expect(2) = 6e-21
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 132 GDFSVASAVDTIREKFSKLQWTTKVWHSSVHPNI*SNVWKLALN 1
G FS + + +R +F W + +W + P VWK+ N
Sbjct: 208 GVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFN 251
>ref|XP_009101981.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 1235
Score = 97.4 bits (241), Expect = 1e-17
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Frame = -3
Query: 827 VEMMQDRLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWT 648
VE + +L GWK K +S R+ L K V+SS+P++ MS P + + ++I R+F+W
Sbjct: 632 VEKVSSKLAGWKRKFLSLAGRITLTKSVISSIPVHTMSTIALPASTLGQLDKIARSFIWG 691
Query: 647 GDPSQRKQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDLK*HGGM-------- 492
RKQ ++ W KIC+P +EGG+G +K + L + L H +
Sbjct: 692 SSEGNRKQHLIAWEKICTPKREGGLGIRKAKEMNVALLGKLGWRLLNTHDALWVRILQKK 751
Query: 491 ---GKIFSS*VQE*KGRMDLLL*KSSIWKG-IKWVQEDVNEGTRWLVGNGANLSVWNDNW 324
G+++ +G S W+ I ++E V GT W++G+G + W DNW
Sbjct: 752 FRVGELYDPCWMVSRGNW------SPTWRSLILGIREVVVPGTCWILGDGRRVRFWRDNW 805
Query: 323 I 321
+
Sbjct: 806 L 806
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 96.3 bits (238), Expect = 2e-17
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Frame = -3
Query: 827 VEMMQDRLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWT 648
+E + RL GWKG+ +S RV L K V+SS+P++ MS PK + +++ R+FLW
Sbjct: 294 LEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWG 353
Query: 647 GDPSQRKQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNET---ILEDLK*HGGMGKIF- 480
+QRKQ ++ W ++C P EGG+G +K + L++ +++D H +I
Sbjct: 354 SSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDY--HSLWARIMR 411
Query: 479 -SS*VQE*KGRMDLLL*K--SSIWKGIK-WVQEDVNEGTRWLVGNGANLSVWNDNWIRST 312
+ VQ+ + + SS W+ + ++E V G W++G+G + W D W+ +
Sbjct: 412 CNYRVQDVRDGAWTKVRSVCSSTWRSVALGMREVVIPGLSWVIGDGREILFWMDKWLTNI 471
Query: 311 TLG---VQHP 291
L VQ P
Sbjct: 472 PLAELLVQEP 481
>ref|XP_013668797.1| PREDICTED: uncharacterized protein LOC106373127 [Brassica napus]
Length = 1818
Score = 95.1 bits (235), Expect = 5e-17
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Frame = -3
Query: 827 VEMMQDRLEGWKGKLMSFQERVLLVKFVVSSLPIYNMSIYRWPKRVIKECERIIRNFLWT 648
+E + RL GWK K +SF RV L K V+SS+P++ MS P+ + + +R+ RNFLW
Sbjct: 1214 LERVSSRLAGWKSKTLSFAGRVTLTKSVLSSIPVHTMSTIMLPQSTLDQLDRLARNFLWG 1273
Query: 647 GDPSQRKQIVLKWNKICSPIKEGGIGNKKFEGYK*GTLNETILEDL--K*HGGMGKIFSS 474
QRK ++ W+KIC EGG+G ++ + +N+ ++ + + +++
Sbjct: 1274 SSSDQRKLHLVAWDKICQHKNEGGLGIRRSK-----EMNKALIAKVGWRVMNNEQSLWAQ 1328
Query: 473 *VQE*KGRMDL-----LL*K---SSIWKGI-KWVQEDVNEGTRWLVGNGANLSVWNDNWI 321
V++ DL ++ K SS W+ + ++E V G RW++G+G + W+D W+
Sbjct: 1329 VVRKKYSVGDLKDMRWMMAKGTWSSTWRSVGLGLREVVARGHRWVLGDGRQIKFWSDTWL 1388
Query: 320 RSTTL 306
L
Sbjct: 1389 SDDPL 1393