BLASTX nr result
ID: Papaver29_contig00059670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00059670
(513 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [... 74 6e-11
gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera... 72 1e-10
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su... 70 5e-10
gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas] 70 5e-10
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 70 5e-10
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 70 5e-10
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 70 5e-10
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [... 69 1e-09
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 69 1e-09
ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citr... 69 1e-09
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 69 1e-09
ref|XP_013713896.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_013606250.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_009355993.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_009122111.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_013722863.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
emb|CDY43892.1| BnaA07g01690D [Brassica napus] 69 1e-09
>gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [Citrus sinensis]
Length = 61
Score = 73.6 bits (179), Expect = 6e-11
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = +1
Query: 376 FRILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
FRILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 1 FRILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 45
>gb|KMZ56185.1| DNA-directed RNA polymerase II subunit 4 [Zostera marina]
Length = 138
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = +1
Query: 343 SNYEPSNS*PTFR-ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
S Y+ +NS R ILSR+QLAEFELCVLGNLCPET +EA AMVPS+ TK R TD+
Sbjct: 66 SRYKNANSVKQVREILSRHQLAEFELCVLGNLCPETVEEAVAMVPSVKTKGRSHTDD 122
>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDE 122
>gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas]
Length = 164
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R DE
Sbjct: 106 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDE 148
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDE 122
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDE 122
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 70.5 bits (171), Expect = 5e-10
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDE 122
>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|763770918|gb|KJB38133.1| hypothetical
protein B456_006G238100 [Gossypium raimondii]
gi|763804330|gb|KJB71268.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
gi|763804331|gb|KJB71269.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R D+
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDD 122
>ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Sesamum
indicum]
Length = 138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 122
>ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum] gi|747083277|ref|XP_011088998.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum]
Length = 138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 122
>gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [Citrus sinensis]
Length = 59
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 1 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 43
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 122
>ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|557529999|gb|ESR41249.1| hypothetical protein
CICLE_v10026735mg [Citrus clementina]
Length = 114
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI T+ R DE
Sbjct: 56 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDE 98
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSRYQLAEFELCVLGNLCPET +EA AMVPSI TK R D+
Sbjct: 80 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDD 122
>ref|XP_013713896.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Brassica
napus]
Length = 138
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSR+QL EFELCVLGNLCPETA+EA AMVPS+ TK R +DE
Sbjct: 80 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDE 122
>ref|XP_013606250.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Brassica
oleracea var. oleracea]
Length = 138
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSR+QL EFELCVLGNLCPETA+EA AMVPS+ TK R +DE
Sbjct: 80 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDE 122
>ref|XP_009355993.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Pyrus x
bretschneideri]
Length = 138
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
+LSRYQLAEFEL V+GNLCPET +EAKA+VPS+ TK RG DE
Sbjct: 80 VLSRYQLAEFELAVIGNLCPETVEEAKAVVPSLKTKGRGHDDE 122
>ref|XP_009122111.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Brassica rapa]
gi|923887987|ref|XP_013715259.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like [Brassica napus]
gi|674963645|emb|CDX69877.1| BnaA10g22260D [Brassica
napus]
Length = 140
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSR+QL EFELCVLGNLCPETA+EA AMVPS+ TK R +DE
Sbjct: 82 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDE 124
>ref|XP_013722863.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Brassica
napus] gi|923905578|ref|XP_013722864.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4-like [Brassica
napus] gi|674911592|emb|CDY21614.1| BnaC09g46780D
[Brassica napus]
Length = 139
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSR+QL EFELCVLGNLCPETA+EA AMVPS+ TK R +DE
Sbjct: 81 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDE 123
>emb|CDY43892.1| BnaA07g01690D [Brassica napus]
Length = 185
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 382 ILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCTDE 510
ILSR+QL EFELCVLGNLCPETA+EA AMVPS+ TK R +DE
Sbjct: 127 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDE 169