BLASTX nr result

ID: Papaver29_contig00058995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00058995
         (887 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348382.1| PREDICTED: F-box/kelch-repeat protein At3g23...    42   4e-08
ref|XP_002894025.1| hypothetical protein ARALYDRAFT_336831 [Arab...    45   2e-07
ref|XP_010647408.1| PREDICTED: putative F-box protein At3g52320 ...    44   5e-06

>ref|XP_006348382.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 322

 Score = 42.4 bits (98), Expect(3) = 4e-08
 Identities = 20/65 (30%), Positives = 37/65 (56%)
 Frame = +3

Query: 54  IINDILTRVPVDSLMRFRCICKLWSNLIVNDLKFVSLHFSRTYSDRGFIWLFYLDRDNGT 233
           II +IL ++P+ SL+RF+C  K W  LI +D  F + H++   +++  +   +L     +
Sbjct: 51  IIVEILIKLPIQSLLRFKCASKFWKTLITSD-HFKAKHYNHAKNNKKILITRWLPDHTTS 109

Query: 234 YFMRS 248
           Y+  S
Sbjct: 110 YYCSS 114



 Score = 32.0 bits (71), Expect(3) = 4e-08
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 634 SFTSGSFYWLTHDRFESYSSDDQRKILAFDVSRETFYTIKYPKGALN 774
           +F  G+F+WL+ D   +Y       +++ D+S E +  I  P+G  N
Sbjct: 239 TFVCGAFHWLSKDNVNNYF------MISLDISSEVYKEIPLPEGICN 279



 Score = 30.8 bits (68), Expect(3) = 4e-08
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
 Frame = +2

Query: 350 LLLSCVEDGLVTNH------VYNPITGYSVKLPILQDIACLRNSYEFLPQLAYDSIMKKY 511
           +L SC  DGL   H      ++NP T  S++LP +     +R+++ F     YD I   Y
Sbjct: 138 VLCSC--DGLSLLHFFYDYLLWNPSTNESIQLPYIDYQESIRSTFGF----GYDLISDDY 191

Query: 512 KVFCIYYDTGRIQNGQYFFKILTLGTESEPWRDVVVSELYPRL 640
           K+  I  D     + +   KIL L  +S  WR +   + +PR+
Sbjct: 192 KILKI--DNNGGDDSRPPSKILAL--KSGSWRKI---DNHPRI 227


>ref|XP_002894025.1| hypothetical protein ARALYDRAFT_336831 [Arabidopsis lyrata subsp.
           lyrata] gi|297339867|gb|EFH70284.1| hypothetical protein
           ARALYDRAFT_336831 [Arabidopsis lyrata subsp. lyrata]
          Length = 488

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
 Frame = +2

Query: 317 FGKQETFHSRLLLLSCVEDGLVTNHVYNPITGYSVKLPILQDIACLRN-SYEFLPQLAYD 493
           F  + +F  R  + S  +  L T  + NP+TG  V LP ++    L++ + E  P L YD
Sbjct: 108 FSSEVSFPLRGFVCSRDKGSLDTMVICNPVTGEFVSLPKVE----LKSVNTETRPYLGYD 163

Query: 494 SIMKKYKVFCIYYDTGRIQNGQYFFKILTLGTESEPWRDVVVSELYPR 637
            I K+ KV CI +D   I N     ++LTL      WR +     YP+
Sbjct: 164 PIDKQLKVLCIKFDD--IPNTCDEHQVLTLENGKHLWRTIQCKPHYPK 209



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +3

Query: 54  IINDILTRVPVDSLMRFRCICKLWSNLIVNDLKFVSLHFSRTYSDRGFIWLFYLDRDNGT 233
           ++ DI +RVP  S+  FRC+ K W +++ +   F  L+ + T S R  + LF+   DNG 
Sbjct: 17  VLMDIFSRVPAKSIAMFRCVSKFWDSILCHP-DFTELYMN-TSSIRQPL-LFFTLEDNGK 73

Query: 234 YFMRSN 251
            F  S+
Sbjct: 74  LFFFSS 79


>ref|XP_010647408.1| PREDICTED: putative F-box protein At3g52320 [Vitis vinifera]
          Length = 376

 Score = 43.5 bits (101), Expect(2) = 5e-06
 Identities = 28/89 (31%), Positives = 46/89 (51%)
 Frame = +3

Query: 33  PHLSHDIIINDILTRVPVDSLMRFRCICKLWSNLIVNDLKFVSLHFSRTYSDRGFIWLFY 212
           P L  +I++ +IL  +PV  L+R +C+CK W++LI  D  F+  H S   S     +++Y
Sbjct: 26  PFLPQEIVV-EILNWMPVKYLLRMKCVCKQWNDLI-QDRYFIQKHISLANS----CYVYY 79

Query: 213 LDRDNGTYFMRSNGVVFYDIDRKEKKIFH 299
            +R      M        D D+ +K+ FH
Sbjct: 80  FNRQKVEGNMDEED---DDKDKSKKETFH 105



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
 Frame = +2

Query: 323 KQETFHSRLLLLSCVEDGLVTNH--------VYNPITGYSVKLPILQDIACLRNSYEFLP 478
           K+ETFH     L C  DG++           ++NP T   + LP       L  S+ F+P
Sbjct: 100 KKETFH-----LVCGCDGMLLKRSNASQKCLIHNPTTRKILYLPDSDHDLSLSISFSFVP 154

Query: 479 QLAYDSIMKKYKVFCIYYDTGRIQNGQYFFKILTLGTESEPWR 607
            +       +YK+  IY DT     G    +++T+G + E WR
Sbjct: 155 SIG------EYKLVSIYEDTA---TGNEGCEVITVGVD-ESWR 187