BLASTX nr result
ID: Papaver29_contig00058601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00058601
(925 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KNA24799.1| hypothetical protein SOVF_012050 [Spinacia oleracea] 84 2e-13
emb|CDX82854.1| BnaC01g13040D [Brassica napus] 84 2e-13
ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II su... 84 2e-13
gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus g... 84 2e-13
gb|AAZ08465.1| RNA polymerase II second largest subunit [Spinaci... 84 2e-13
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch... 84 2e-13
gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriode... 84 2e-13
gb|AAY85200.1| RNA polymerase II second largest subunit, partial... 84 2e-13
gb|AAY85199.1| RNA polymerase II second largest subunit, partial... 84 2e-13
gb|AAY85203.1| RNA polymerase II second largest subunit, partial... 84 2e-13
gb|AAY85235.1| RNA polymerase II second largest subunit, partial... 84 2e-13
gb|AAY85204.1| RNA polymerase II second largest subunit, partial... 84 2e-13
gb|AAY85217.1| RNA polymerase II second largest subunit, partial... 83 3e-13
gb|AII84654.1| RNA polymerase II, partial [Endogemma caespiticia] 82 4e-13
emb|CAA79527.1| RNA polymerase II second largest subunit [Arabid... 82 6e-13
emb|CAA79528.1| RNA polymerase II second largest subunit [Arabid... 82 6e-13
gb|AAX48370.1| RPB2I, partial [Rhododendron sororium] gi|6165364... 82 8e-13
gb|AAX48310.1| RPB2I, partial [Rhododendron mucronulatum] gi|616... 82 8e-13
gb|AAX48627.1| RPB2I, partial [Rhododendron calendulaceum] 82 8e-13
gb|AAX48388.1| RPB2I, partial [Rhododendron vaccinioides] 82 8e-13
>gb|KNA24799.1| hypothetical protein SOVF_012050 [Spinacia oleracea]
Length = 1193
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 372 YIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 426
>emb|CDX82854.1| BnaC01g13040D [Brassica napus]
Length = 530
Score = 83.6 bits (205), Expect = 2e-13
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +1
Query: 31 MHSEILRKFFSCSPRYIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKL 210
+H+ + + + + RYIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKL
Sbjct: 374 IHTLLWCSYCAKTLRYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 433
Query: 211 TRDVRGYVQK 240
TRDVR YVQK
Sbjct: 434 TRDVRSYVQK 443
>ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Eucalyptus
grandis] gi|629109448|gb|KCW74594.1| hypothetical
protein EUGRSUZ_E03313 [Eucalyptus grandis]
Length = 1196
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 375 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 429
>gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus grandis]
Length = 1197
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 375 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 429
>gb|AAZ08465.1| RNA polymerase II second largest subunit [Spinacia oleracea]
Length = 495
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 331 YIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 385
>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
Length = 951
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 267 YIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 321
>gb|AAZ08461.1| RNA polymerase II second largest subunit [Liriodendron tulipifera]
Length = 942
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 259 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 313
>gb|AAY85200.1| RNA polymerase II second largest subunit, partial [Coriaria
sarmentosa]
Length = 952
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 267 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 321
>gb|AAY85199.1| RNA polymerase II second largest subunit, partial [Cissus tuberosa]
Length = 951
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL AF RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVR YVQK
Sbjct: 267 YIIHQLLLCAFGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQK 321
>gb|AAY85203.1| RNA polymerase II second largest subunit, partial [Dicentra
formosa]
Length = 873
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 267 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 321
>gb|AAY85235.1| RNA polymerase II second largest subunit, partial [Tetracentron
sinense]
Length = 951
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 267 YIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 321
>gb|AAY85204.1| RNA polymerase II second largest subunit, partial [Dillenia
suffruticosa]
Length = 868
Score = 83.6 bits (205), Expect = 2e-13
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 262 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 316
>gb|AAY85217.1| RNA polymerase II second largest subunit, partial [Muehlenbeckia
platyclada]
Length = 875
Score = 83.2 bits (204), Expect = 3e-13
Identities = 42/55 (76%), Positives = 45/55 (81%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YI+H LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVRGYVQK
Sbjct: 267 YIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 321
>gb|AII84654.1| RNA polymerase II, partial [Endogemma caespiticia]
Length = 236
Score = 82.4 bits (202), Expect = 4e-13
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQKVLFTW 255
YIIH LLL A R EDD DH NKRLD+AGP LGGLF M+FRKLT+DVRGY+QK +
Sbjct: 130 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRGYLQKCVDNG 189
Query: 256 TLLVFAYVASA 288
++ AY A
Sbjct: 190 KEIILAYAVKA 200
>emb|CAA79527.1| RNA polymerase II second largest subunit [Arabidopsis thaliana]
Length = 1188
Score = 82.0 bits (201), Expect = 6e-13
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +1
Query: 13 VYSSIIMHSEILRKFFSCSPRYIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF* 192
+Y I H E + ++ YIIH LLL A RPEDD DH NKRLD+AGP LGGLF
Sbjct: 354 LYVGIGEHCETKKAYYF---GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFR 410
Query: 193 MIFRKLTRDVRGYVQK 240
M+FRKLTRDVR YVQK
Sbjct: 411 MLFRKLTRDVRSYVQK 426
>emb|CAA79528.1| RNA polymerase II second largest subunit [Arabidopsis thaliana]
Length = 1188
Score = 82.0 bits (201), Expect = 6e-13
Identities = 46/76 (60%), Positives = 52/76 (68%)
Frame = +1
Query: 13 VYSSIIMHSEILRKFFSCSPRYIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF* 192
+Y I H E + ++ YIIH LLL A RPEDD DH NKRLD+AGP LGGLF
Sbjct: 354 LYVGIGEHCETKKAYYF---GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFR 410
Query: 193 MIFRKLTRDVRGYVQK 240
M+FRKLTRDVR YVQK
Sbjct: 411 MLFRKLTRDVRSYVQK 426
>gb|AAX48370.1| RPB2I, partial [Rhododendron sororium] gi|61653643|gb|AAX48376.1|
RPB2I, partial [Rhododendron asperulum]
gi|61654345|gb|AAX48700.1| RPB2I, partial [Rhododendron
nipponicum]
Length = 125
Score = 81.6 bits (200), Expect = 8e-13
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVR YVQK
Sbjct: 1 YIIHRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 55
>gb|AAX48310.1| RPB2I, partial [Rhododendron mucronulatum]
gi|61653513|gb|AAX48316.1| RPB2I, partial [Rhododendron
ferrugineum] gi|61653526|gb|AAX48322.1| RPB2I, partial
[Rhododendron minus] gi|61653539|gb|AAX48328.1| RPB2I,
partial [Rhododendron impeditum]
gi|61653565|gb|AAX48340.1| RPB2I, partial [Rhododendron
dielsianum] gi|61653578|gb|AAX48346.1| RPB2I, partial
[Rhododendron radians] gi|61653591|gb|AAX48352.1| RPB2I,
partial [Rhododendron herzogii]
gi|61653604|gb|AAX48358.1| RPB2I, partial [Rhododendron
konori] gi|61653617|gb|AAX48364.1| RPB2I, partial
[Rhododendron crassifolium] gi|61653682|gb|AAX48394.1|
RPB2I, partial [Rhododendron campylogynum]
gi|61653695|gb|AAX48400.1| RPB2I, partial [Rhododendron
genestierianum] gi|61653721|gb|AAX48412.1| RPB2I,
partial [Rhododendron spinuliferum]
gi|61653734|gb|AAX48418.1| RPB2I, partial [Rhododendron
afghanicum] gi|61653760|gb|AAX48430.1| RPB2I, partial
[Rhododendron virgatum] gi|61653773|gb|AAX48436.1|
RPB2I, partial [Rhododendron lutescens]
gi|61653786|gb|AAX48442.1| RPB2I, partial [Rhododendron
triflorum] gi|61653799|gb|AAX48448.1| RPB2I, partial
[Rhododendron keiskei] gi|61653825|gb|AAX48460.1| RPB2I,
partial [Rhododendron mekongense]
gi|61653838|gb|AAX48466.1| RPB2I, partial [Rhododendron
hypoleucum] gi|61653851|gb|AAX48472.1| RPB2I, partial
[Rhododendron tomentosum] gi|61653864|gb|AAX48478.1|
RPB2I, partial [Rhododendron stamineum]
gi|61653890|gb|AAX48490.1| RPB2I, partial [Rhododendron
championiae] gi|61653903|gb|AAX48496.1| RPB2I, partial
[Rhododendron wardii] gi|61653916|gb|AAX48502.1| RPB2I,
partial [Rhododendron macabeanum]
gi|61653929|gb|AAX48508.1| RPB2I, partial [Rhododendron
forrestii] gi|61653942|gb|AAX48514.1| RPB2I, partial
[Rhododendron roxieanum] gi|61653968|gb|AAX48526.1|
RPB2I, partial [Rhododendron macrophyllum]
gi|61653981|gb|AAX48532.1| RPB2I, partial [Rhododendron
aureum] gi|61653994|gb|AAX48538.1| RPB2I, partial
[Rhododendron maculiferum] gi|61654007|gb|AAX48544.1|
RPB2I, partial [Rhododendron ungernii]
gi|61654020|gb|AAX48550.1| RPB2I, partial [Rhododendron
pseudochrysanthum] gi|61654033|gb|AAX48556.1| RPB2I,
partial [Rhododendron pachysanthum]
gi|61654046|gb|AAX48562.1| RPB2I, partial [Rhododendron
hyperythrum] gi|61654059|gb|AAX48568.1| RPB2I, partial
[Rhododendron catawbiense] gi|61654072|gb|AAX48574.1|
RPB2I, partial [Rhododendron ponticum]
gi|61654085|gb|AAX48580.1| RPB2I, partial [Rhododendron
maximum] gi|61654098|gb|AAX48586.1| RPB2I, partial
[Rhododendron smirnowii] gi|61654137|gb|AAX48604.1|
RPB2I, partial [Rhododendron adenopodum]
gi|61654150|gb|AAX48610.1| RPB2I, partial [Rhododendron
formosanum] gi|61654163|gb|AAX48616.1| RPB2I, partial
[Rhododendron canescens] gi|61654176|gb|AAX48622.1|
RPB2I, partial [Rhododendron occidentale]
gi|61654215|gb|AAX48640.1| RPB2I, partial [Rhododendron
molle] gi|61654228|gb|AAX48646.1| RPB2I, partial
[Rhododendron canadense] gi|61654241|gb|AAX48652.1|
RPB2I, partial [Rhododendron tashiroi]
gi|61654254|gb|AAX48658.1| RPB2I, partial [Rhododendron
wadanum] gi|61654267|gb|AAX48664.1| RPB2I, partial
[Rhododendron mariesii] gi|61654279|gb|AAX48669.1|
RPB2I, partial [Rhododendron rubropilosum]
gi|61654293|gb|AAX48676.1| RPB2I, partial [Rhododendron
ovatum] gi|61654306|gb|AAX48682.1| RPB2I, partial
[Rhododendron leptothrium] gi|61654319|gb|AAX48688.1|
RPB2I, partial [Rhododendron tsusiophyllum]
gi|61654332|gb|AAX48694.1| RPB2I, partial [Rhododendron
semibarbatum] gi|61654358|gb|AAX48706.1| RPB2I, partial
[Menziesia ferruginea] gi|61654384|gb|AAX48718.1| RPB2I,
partial [Rhododendron vaseyi] gi|61654397|gb|AAX48724.1|
RPB2I, partial [Rhododendron schlippenbachii]
gi|61654410|gb|AAX48730.1| RPB2I, partial [Rhododendron
albrechtii]
Length = 125
Score = 81.6 bits (200), Expect = 8e-13
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVR YVQK
Sbjct: 1 YIIHRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 55
>gb|AAX48627.1| RPB2I, partial [Rhododendron calendulaceum]
Length = 125
Score = 81.6 bits (200), Expect = 8e-13
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVR YVQK
Sbjct: 1 YIIHRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 55
>gb|AAX48388.1| RPB2I, partial [Rhododendron vaccinioides]
Length = 125
Score = 81.6 bits (200), Expect = 8e-13
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = +1
Query: 76 YIIH*LLLSAFYFRPEDD*DH*RNKRLDIAGPSLGGLF*MIFRKLTRDVRGYVQK 240
YIIH LLL A RPEDD DH NKRLD+AGP LGGLF M+FRKLTRDVR YVQK
Sbjct: 1 YIIHRLLLCALGRRPEDDRDHYANKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 55