BLASTX nr result

ID: Papaver29_contig00058147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00058147
         (444 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010553613.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-07
ref|XP_010245038.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...    55   5e-06
ref|XP_008389701.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_007222350.1| hypothetical protein PRUPE_ppa004842mg [Prun...    55   1e-05
ref|XP_008221878.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    55   1e-05

>ref|XP_010553613.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
           [Tarenaya hassleriana]
          Length = 490

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -2

Query: 428 GRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVE 321
           GRGDGS+W PS E I TLM HF+QE+D +GAE+FVE
Sbjct: 399 GRGDGSKWLPSQETIGTLMGHFEQEKDVDGAESFVE 434



 Score = 23.9 bits (50), Expect(2) = 1e-07
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 319 VKKG*A*IRSRCV*ALMGTYAAAGKASQSIQCW*MKTKCVLKNKLVEEET 170
           +KKG   +    + +L+ TYAAAGK S +     M+ +  ++N  V E T
Sbjct: 436 LKKGTDNVGVEVLESLIRTYAAAGKKSTA-----MRRRLKMENVEVSEAT 480


>ref|XP_010245038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
           [Nelumbo nucifera]
          Length = 489

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 437 IQEGRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVEGKERLSMN 297
           I  GRGDG +W+PS EV+ +LM+HF+QERD EGAE F+E  ++  +N
Sbjct: 395 ISTGRGDGGKWSPSPEVVQSLMTHFEQERDVEGAEGFMETLKKADVN 441


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score = 54.7 bits (130), Expect(2) = 5e-06
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = -2

Query: 437 IQEGRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVE 321
           I +GRGDG +W PS EV+ + M+HF+Q++D +GAE F+E
Sbjct: 396 ISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIE 434



 Score = 22.3 bits (46), Expect(2) = 5e-06
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -3

Query: 277 ALMGTYAAAGKASQSIQ 227
           +L+ TYAAAG+ SQ ++
Sbjct: 450 SLIRTYAAAGRTSQVLR 466


>ref|XP_008389701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
           [Malus domestica]
          Length = 489

 Score = 55.1 bits (131), Expect(2) = 1e-05
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = -2

Query: 437 IQEGRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVE 321
           I  GRGDG +W+PS +++ TLM HF+QE+D +GAE F+E
Sbjct: 395 ISIGRGDGKKWSPSNKIVKTLMEHFEQEKDVDGAEGFLE 433



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 277 ALMGTYAAAGKASQSIQ 227
           +L+ TYAAAG+ S +++
Sbjct: 449 SLIRTYAAAGRTSPAMR 465


>ref|XP_007222350.1| hypothetical protein PRUPE_ppa004842mg [Prunus persica]
           gi|462419286|gb|EMJ23549.1| hypothetical protein
           PRUPE_ppa004842mg [Prunus persica]
          Length = 489

 Score = 55.1 bits (131), Expect(2) = 1e-05
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = -2

Query: 428 GRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVE 321
           GRGDG +W+PS +++ TLM HF+QE+D +GAE F+E
Sbjct: 398 GRGDGGKWSPSRKIVKTLMEHFEQEKDVDGAEGFLE 433



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 277 ALMGTYAAAGKASQSIQ 227
           +L+ TYAAAG+ + S++
Sbjct: 449 SLIRTYAAAGRTTPSMR 465


>ref|XP_008221878.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g60770 [Prunus mume]
          Length = 482

 Score = 55.1 bits (131), Expect(2) = 1e-05
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = -2

Query: 428 GRGDGSQWTPSMEVI*TLMSHFKQERDAEGAEAFVE 321
           GRGDG +W+PS +++ TLM HF+QE+D +GAE F+E
Sbjct: 391 GRGDGGKWSPSRKIVKTLMEHFEQEKDVDGAEGFLE 426



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 277 ALMGTYAAAGKASQSIQ 227
           +L+ TYAAAG+ + S++
Sbjct: 442 SLIRTYAAAGRTTPSMR 458


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