BLASTX nr result

ID: Papaver29_contig00057141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00057141
         (425 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation spec...    73   7e-11
ref|XP_010271396.1| PREDICTED: cleavage and polyadenylation spec...    72   2e-10
ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prun...    66   1e-08
ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation spec...    65   2e-08

>ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II [Nelumbo nucifera]
          Length = 694

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 42/141 (29%), Positives = 68/141 (48%)
 Frame = -1

Query: 425 KGELMPTLALEEHKIQFAHCCSVNAGTLLLQEQDQHNDELSESLSTGSTISEMGNSSNAL 246
           + EL+P L +EEH++QFA+CC V+   +   +  +H  E SE +   +++     SS+++
Sbjct: 517 QSELLPMLGVEEHQVQFAYCCPVHVRNVDNSKSHEHGSESSEPVGFSTSLQPCAMSSSSI 576

Query: 245 AQITGCFSATKEXXXXXXXXXXXXXXXXXXXXXXXXKIQEFRDHLQVESFHVSICQKNNN 66
                  S                            KI EF D+LQ++SFHV +C  + N
Sbjct: 577 KIADP--SLENILLSSEQFLWLHLLFVELSNKFPGEKILEFPDNLQLQSFHVHVCP-DAN 633

Query: 65  CPCKIKDFSDVGSVVSFCCKW 3
           CP K+K+  +    V FCC+W
Sbjct: 634 CPYKVKEVIEDKPAVHFCCRW 654


>ref|XP_010271396.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Nelumbo nucifera]
          Length = 903

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 42/141 (29%), Positives = 66/141 (46%)
 Frame = -1

Query: 425  KGELMPTLALEEHKIQFAHCCSVNAGTLLLQEQDQHNDELSESLSTGSTISEMGNSSNAL 246
            + EL+P L +EEH++QFA+CC V+   +   +  +H  E SE +   +++     SS+ +
Sbjct: 763  RSELLPMLGVEEHQVQFAYCCPVHVRNVDNSKSHEHGSESSEPVGFSTSLQPCAMSSSLI 822

Query: 245  AQITGCFSATKEXXXXXXXXXXXXXXXXXXXXXXXXKIQEFRDHLQVESFHVSICQKNNN 66
                   S                            KI EF D+LQ +SFHV +C  + N
Sbjct: 823  KIADP--SLENMLLSSEEFLWLHLLFVELSNKLPGEKILEFPDNLQPKSFHVHVCP-DAN 879

Query: 65   CPCKIKDFSDVGSVVSFCCKW 3
            CP K+K+  +    V FCC+W
Sbjct: 880  CPYKVKEVIEDKHAVHFCCRW 900


>ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
           gi|462422065|gb|EMJ26328.1| hypothetical protein
           PRUPE_ppa002557mg [Prunus persica]
          Length = 658

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 43/140 (30%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 ELMPTLALEEHKIQFAHCCSVNAGTLLLQEQDQHNDELSESLSTGSTISEMGNSSNALAQ 240
           EL+  L  ++H++QFA+CC  + G         H  E   S +    + +    S  L Q
Sbjct: 523 ELLLMLGEKKHQVQFAYCCPADIG---------HLGETKSSTTNDGQLCKSETCSRLLRQ 573

Query: 239 ITGCFSATKEXXXXXXXXXXXXXXXXXXXXXXXXKIQEFRDHLQVESFHVSICQKNNNCP 60
           ++   S                             IQ+F DHLQVESFHVSIC K NNCP
Sbjct: 574 LSAKLS----------------------NEFSQGNIQDFEDHLQVESFHVSICLK-NNCP 610

Query: 59  CKIKDFSDVGSVVS-FCCKW 3
            ++ D  +     + FCC W
Sbjct: 611 YRLMDVQNKSQEAAFFCCSW 630


>ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II [Prunus mume]
          Length = 943

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 ELMPTLALEEHKIQFAHCCSVNAGTLLLQEQDQHNDELSESLSTGSTISEMGNSSNALAQ 240
           EL+  L  ++H+++FA+CC V+ G L          E   S +    + +    S  L Q
Sbjct: 523 ELLLMLGEKKHQVRFAYCCPVDIGNL---------GETKSSTTNDGQLCKSETCSRLLRQ 573

Query: 239 ITGCFSATKEXXXXXXXXXXXXXXXXXXXXXXXXKIQEFRDHLQVESFHVSICQKNNNCP 60
           ++   S                             IQ+F DHLQVESFHVSIC K NNCP
Sbjct: 574 LSAKLS----------------------NEFSQGNIQDFEDHLQVESFHVSICLK-NNCP 610

Query: 59  CKIKDFSDVGSVVS-FCCKW 3
            ++ D  +     + FCC W
Sbjct: 611 YRLMDVQNKSQEAAFFCCSW 630


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