BLASTX nr result

ID: Papaver29_contig00056447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00056447
         (400 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010263252.1| PREDICTED: F-box protein At5g07610-like [Nel...    59   2e-06
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    58   3e-06
ref|XP_004305299.1| PREDICTED: F-box protein At5g07610-like [Fra...    56   9e-06

>ref|XP_010263252.1| PREDICTED: F-box protein At5g07610-like [Nelumbo nucifera]
          Length = 306

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/95 (40%), Positives = 52/95 (54%)
 Frame = +3

Query: 114 NSSASFIGSNVDILTVILTRLPXXXXXXXXXXXXQWLSLINDPQFVHKHFIQNPRFSIPG 293
           +SSA    SN D+L+ IL RLP            QWLS I++P+F H H ++NP  S+ G
Sbjct: 21  HSSAVITNSN-DLLSEILLRLPVKSLVRFKSVSKQWLSQISNPRFTHNHCLRNPS-SVSG 78

Query: 294 LFYGNDSNSDFDRKPIYDYIILDGNTNSYVPFETL 398
           LF      S    KP +D+I LDG   +  PF++L
Sbjct: 79  LFLRISLISLPPEKPNFDFISLDGKP-TMAPFKSL 112


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 38/68 (55%)
 Frame = +3

Query: 105 IDSNSSASFIGSNVDILTVILTRLPXXXXXXXXXXXXQWLSLINDPQFVHKHFIQNPRFS 284
           +DS+ SA  IGSN D++T IL RLP            QWLSLI+ P F   H ++NP  +
Sbjct: 1   MDSSLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHT 60

Query: 285 IPGLFYGN 308
           I  LF  N
Sbjct: 61  ISALFLRN 68


>ref|XP_004305299.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 385

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/90 (35%), Positives = 47/90 (52%)
 Frame = +3

Query: 111 SNSSASFIGSNVDILTVILTRLPXXXXXXXXXXXXQWLSLINDPQFVHKHFIQNPRFSIP 290
           S+ SA  +GS  ++LT IL R+P            QWLSLI+DP F  +H  QNP   I 
Sbjct: 5   SSCSAEIVGSIDELLTQILERVPALSLIRSKCVSKQWLSLISDPDFHRRHTFQNPNPKIL 64

Query: 291 GLFYGNDSNSDFDRKPIYDYIILDGNTNSY 380
             F   ++N D   +P+Y   +++  TN +
Sbjct: 65  A-FLSPETNQDQKHRPVY---VVNPTTNQF 90


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