BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00056240
         (1133 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013746247.1| PREDICTED: uncharacterized protein LOC106448...   124   6e-28
ref|XP_009129000.1| PREDICTED: putative ribonuclease H protein A...   119   8e-28
ref|XP_009144587.1| PREDICTED: putative ribonuclease H protein A...   130   2e-27
ref|XP_013689246.1| PREDICTED: uncharacterized protein LOC106393...   123   7e-27
ref|XP_009139323.1| PREDICTED: putative ribonuclease H protein A...   118   1e-26
ref|XP_013713727.1| PREDICTED: uncharacterized protein LOC106417...   115   2e-26
ref|XP_013658064.1| PREDICTED: uncharacterized protein LOC106362...   115   3e-26
ref|XP_013632720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   120   3e-26
ref|XP_009146138.1| PREDICTED: putative ribonuclease H protein A...   119   7e-26
ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403...   115   9e-26
ref|XP_010507511.1| PREDICTED: uncharacterized protein LOC104784...   105   1e-25
ref|XP_013723740.1| PREDICTED: uncharacterized protein LOC106427...   119   2e-25
ref|XP_013716278.1| PREDICTED: uncharacterized protein LOC106419...   112   2e-25
ref|XP_013700461.1| PREDICTED: uncharacterized protein LOC106404...   124   2e-25
ref|XP_010549579.1| PREDICTED: uncharacterized protein LOC104820...   112   5e-25
ref|XP_009139889.1| PREDICTED: putative ribonuclease H protein A...   104   8e-25
ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363...   116   1e-24
ref|XP_009130051.1| PREDICTED: putative ribonuclease H protein A...   112   1e-24
ref|XP_010058837.1| PREDICTED: uncharacterized protein LOC104446...    99   1e-24
ref|XP_009121379.1| PREDICTED: putative ribonuclease H protein A...   102   2e-24

>ref|XP_013746247.1| PREDICTED: uncharacterized protein LOC106448985 [Brassica napus]
          Length = 1526

 Score =  124 bits (311), Expect(2) = 6e-28
 Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++   FW ++     SW WR+LL  + ++K F  + + DG +    +D+W
Sbjct: 1202 LWVKWVRRFLLREYTFWDVKDTGLGSWVWRKLLRIRSMAKRFLRYEVNDGNTARFWTDIW 1261

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVD-CDK 777
            HP+G+L +   + +   L    + +++    E  W+F    +  L   IV ++    C+ 
Sbjct: 1262 HPRGRLIEVAGEVNTQRLGIRREARISEVFREGLWHFRRCRDPQLLSLIVDIEAFKVCET 1321

Query: 776  SVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
               D + WK     +                     WS LVWF   IPR +FITWL++ +
Sbjct: 1322 DGRDAVLWKSKDGNYGPKFVASETWHQIRQSKEKVNWSKLVWFSQGIPRYAFITWLAIRD 1381

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWI 468
            RL T  +   WG  Q  +C+ C + D  E  +HI+ +C +   +W+
Sbjct: 1382 RLSTGRRTSSWG--QPQSCIFCMEPD--ETRDHIYFACPYTFMVWL 1423



 Score = 28.9 bits (63), Expect(2) = 6e-28
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -3

Query: 357  KLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEVKVKMLSRSCKVGDSPQSRCFME 178
            +L+    VY +WRE N     + Y   DQ+   I  +  V+  + S K   +P+ R  M 
Sbjct: 1459 RLVFQVSVYLIWRESNERKHNTSYKYVDQLAKVI--DKTVRNRTTSLKYACNPRLRGLMI 1516

Query: 177  R 175
            R
Sbjct: 1517 R 1517


>ref|XP_009129000.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 423

 Score =  119 bits (297), Expect(2) = 8e-28
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W DW     +    FW+L +    SW W+RLL+ + ++  F   ++G+G++T    D+W
Sbjct: 105  LWADWHRSVHLSTSSFWTLSIDQADSWAWKRLLKLRPLAAQFCRSLVGNGQTTSFWWDVW 164

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYF-HEALEEDLS-HTIVQMKEVDCD 780
             P G+L D++       L    D KVA  +   GW   H   + ++  H  +    +   
Sbjct: 165  TPLGQLIDFIGPSGPRALRLHQDAKVADAIHNTGWTLPHPRSQREVELHAHLTTITLPLP 224

Query: 779  KSVSDLIAWKP--SSLGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
             ++ D   W    S L                    W  +VWFK HIP+ +F  W + ++
Sbjct: 225  NNIDDSYIWVAGNSPLTVFSSAATWEVMRPRQDEKDWFDVVWFKGHIPKHAFTMWTANYD 284

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIW 471
            RL TR+++  WG+     C LC     VE  +H+  +C F +TIW
Sbjct: 285  RLPTRSRLAAWGMTIAPDCALC--SGAVETRDHLLFTCAFSATIW 327



 Score = 33.9 bits (76), Expect(2) = 8e-28
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = -3

Query: 423 WKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEV 244
           W + + W  ++      V  ++K+ + + +YH+W++RNN+I          V   I  EV
Sbjct: 344 WAELLSWIRSS--RSSAVTLLRKVAVQAVIYHIWKQRNNLIHNRNLVPPMTVFKGIDKEV 401

Query: 243 KVKMLSR 223
           +  + SR
Sbjct: 402 RNIISSR 408


>ref|XP_009144587.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 357

 Score =  130 bits (327), Expect = 2e-27
 Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 8/235 (3%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++G  FW ++  +  SW W++LL+ + V++ F    I DG+     +D+W
Sbjct: 121  LWGKWVKQTLLRGVSFWDVKEGSTGSWVWKKLLQLRPVAQRFLKMDIHDGKLVKFWTDIW 180

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKE--VDCD 780
            HP G+L + V      +L  +    +A  + E  W F    +  + + IV+++E  V+ +
Sbjct: 181  HPIGRLIEIVGDRGRLKLGIAISACIADVLVENVWRFRRTRDTTVQNMIVKVQELGVELE 240

Query: 779  KSVSDLIAWK---PSSLGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLH 609
             +V D + WK     +                  + VWS L+WF   +PR +FI WL++ 
Sbjct: 241  TNVQDEVLWKRKDDENGREFSAATTWEHIRCKRPVVVWSKLIWFAQGVPRYAFIAWLAVK 300

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIW---IGLLLK 453
            +RL T +K+  WG  QV  CV C + D  E  NH+F +C +  T+W   IG LL+
Sbjct: 301  DRLSTGSKMRAWG--QVQCCVFCGEPD--ETRNHLFFACPYSYTLWLQVIGTLLR 351


>ref|XP_013689246.1| PREDICTED: uncharacterized protein LOC106393042 [Brassica napus]
          Length = 906

 Score =  123 bits (308), Expect(2) = 7e-27
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 5/227 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV +NL+K   FW  +     SW WR+LL  + ++K F    I DG      +DLW
Sbjct: 583  LWAVWVKQNLLKHETFWDAKDTVIGSWAWRKLLRYRPLAKQFIRMNIHDGLDVRFWTDLW 642

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMK--EVDCD 780
            HP G++ D V +    +L    D K+     +  W F    ++ + + I+ ++   V   
Sbjct: 643  HPCGRVIDTVGELGTQKLGIRRDAKICEVFLDGDWRFRRCRDQRIQNLILDIRAFPVSLV 702

Query: 779  KSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLH 609
            ++V D + W+     +                    VWS LVWF   +PR +FITWL++ 
Sbjct: 703  ENVRDGVQWRNGEDTYGERFVSKATWDLTRCRKENVVWSKLVWFPQGVPRFAFITWLAIR 762

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWI 468
             RL T  +  +WG  Q   C+ C + D  E  +H+F +C +  T+WI
Sbjct: 763  NRLSTGHRTSQWGHPQ--GCLFCGEPD--ETRDHLFFACPYTFTLWI 805



 Score = 26.6 bits (57), Expect(2) = 7e-27
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 357 KLILNSFVYHVWRERNN 307
           +L+L   +Y++WRERN+
Sbjct: 841 RLVLQVTIYYIWRERND 857


>ref|XP_009139323.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 424

 Score =  118 bits (295), Expect(2) = 1e-26
 Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W DWV K L++   FW ++     SW WR+LL  + ++K F    + +G+     +D+W
Sbjct: 102  LWVDWVRKYLMRNESFWDIRDTGLGSWIWRKLLRLRYLAKRFVRMEVHNGQLVHFWTDIW 161

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTI--VQMKEVDCD 780
            HP G+L +   +    +L  +    ++       W F    +  +   I  ++   +  D
Sbjct: 162  HPSGRLIEVAGEIGTQKLGIARSALISEVRVGAHWSFRRCRDVRMREIIHMIEAHHLAED 221

Query: 779  KSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLH 609
            ++ +D++ W+ +   F                     WS +VWF   +PR +FITWL++ 
Sbjct: 222  RTANDIVLWRKNENEFCDIFSTSATWQQIRTHRTQTTWSKVVWFSLGVPRFAFITWLAIK 281

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWI 468
             RL T  ++  WGI Q   C+ C +    E  +H+F +C +  T+WI
Sbjct: 282  NRLSTGDRVQSWGITQ--GCLFCGEPH--ESRDHLFFACPYTFTLWI 324



 Score = 30.8 bits (68), Expect(2) = 1e-26
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 357 KLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEVKVKMLSRSCKVGDSPQSRCFME 178
           +L+    VY +WRERNN     K     Q+   I   V+ ++L  S +  + P+ R  M+
Sbjct: 360 RLVFQVTVYMIWRERNNRRHSQKPRQVQQLAKIIDKTVRNRLL--SVRYWEKPRLRGLMQ 417


>ref|XP_013713727.1| PREDICTED: uncharacterized protein LOC106417474 [Brassica napus]
          Length = 1627

 Score =  115 bits (288), Expect(2) = 2e-26
 Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W DW     +  R FW+L      SW W+RLL+ + ++  F   ++G+G+ T    D W
Sbjct: 1303 LWADWHRSIHLSTRSFWTLSPAQSDSWVWKRLLKLRPLAAQFCFSVLGNGKKTSFWYDTW 1362

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWY-FHEALEEDLS-HTIVQMKEVDCD 780
             P G+L +++       L    D +VA  + E  W   H   +++L  HT +    +  +
Sbjct: 1363 TPLGQLINYIGPAGPRALRVRKDAQVADTIREATWTPPHPRSQQELDLHTHLTTISLPLN 1422

Query: 779  KSVSDLIAW--KPSSLGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
              + D   W    SSL                    W  +VWFK  +P+ +F  W++  +
Sbjct: 1423 SDIDDFYIWIAGDSSLNVFSSAATWEVMRPRQYAKDWFEVVWFKGAVPKLAFNMWIANAD 1482

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLK 453
            RL T +++  WGI     C LC     VE  +H+  SCDF + IW  + ++
Sbjct: 1483 RLPTMSRLASWGIPVSPNCALCSSAS-VETRDHLMLSCDFSANIWRDVFIR 1532



 Score = 32.7 bits (73), Expect(2) = 2e-26
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = -3

Query: 423  WKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNII 301
            W   + W  ++      ++ ++K+ + S +YH+W++RNN++
Sbjct: 1543 WAKLLSWIRSSASSS--LSLLRKIAVQSVIYHIWKQRNNMV 1581


>ref|XP_013658064.1| PREDICTED: uncharacterized protein LOC106362763 [Brassica napus]
          Length = 1670

 Score =  115 bits (288), Expect(2) = 3e-26
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV   L+K   FW ++     SW WR+LL+ + V+ +F    I DG +     D W
Sbjct: 1348 LWVSWVKHYLLKYNSFWDVRDDTKGSWIWRKLLKLRDVAYEFLRFDIQDGNNCHFWFDDW 1407

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALE---EDLSHTIVQMKEVDC 783
              +GKL D         L      KV+  V  E W    +      +L ++I+Q +E   
Sbjct: 1408 LGQGKLIDITGPTGTTYLGIRRHAKVSDAVTLEEWSIRGSRSRRFHELRNSILQ-REPPQ 1466

Query: 782  DKSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSL 612
             ++  D++ WK  S  +                     WS ++WF   +PR SFITWL++
Sbjct: 1467 PENGKDIVLWKHGSDDYRDHYSAASTWEQVRSRRPTVEWSRVIWFTQGVPRFSFITWLAV 1526

Query: 611  HERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLKMVTLGI 435
              RL T  ++ +WG++Q  +C LC ++D  E  +H+F +C +  T+W  L  +++ + I
Sbjct: 1527 KNRLSTGDRMRQWGMVQ--SCELCGERD--ETRDHLFFACPYSYTVWESLARRLIGISI 1581



 Score = 32.0 bits (71), Expect(2) = 3e-26
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 357  KLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEVKVKMLS 226
            KL+L + +YH+WRERN    Q    + D +   I   V+ ++ S
Sbjct: 1606 KLLLQTTIYHIWRERNGRRHQQSRVTTDHMRRRIDKAVRNRISS 1649


>ref|XP_013632720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106338243
            [Brassica oleracea var. oleracea]
          Length = 1223

 Score =  120 bits (300), Expect(2) = 3e-26
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++   FW  +     SW WR+LL  + ++K F    I DG +    +D+W
Sbjct: 761  LWVQWVKQYLLRHDTFWDAKDTVIGSWVWRKLLRYRPLAKQFIRMNIQDGCTVRFWTDIW 820

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKE--VDCD 780
            HPKG+L + + +    +L F  + K+   + +  W F    + +    I  +KE  V   
Sbjct: 821  HPKGRLIEAMGEIGTQKLGFVRNAKICDVLVDGDWRFRRCRDPNFQALIANIKELQVQLV 880

Query: 779  KSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLH 609
             + SD   W      +                     WS L+WF   +PR +FITWL+L 
Sbjct: 881  GNNSDTALWLKGEDSYDDRFISSTTWDLIRVRRDRVDWSRLIWFSQGVPRFAFITWLALR 940

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLL 459
            +RL T  +  +WG  Q  +C+ C + D  E  +H+F +C +  T+WI +L
Sbjct: 941  DRLSTGHRTSQWGHPQ--SCLYCGEPD--ETRDHLFFACPYTFTLWIRVL 986



 Score = 27.3 bits (59), Expect(2) = 3e-26
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
 Frame = -3

Query: 408  DWCVTAFK-----GQGLVARIKKLILNSFVYHVWRERN 310
            DW  T F         L   + +++L   +Y+VWRERN
Sbjct: 997  DWDTTIFSLLTGSYDNLTYILLRIVLQVTIYYVWRERN 1034


>ref|XP_009146138.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 396

 Score =  119 bits (297), Expect(2) = 7e-26
 Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++G   W  +     SW WR+LL+ + ++K+F +  + DG +    +DLW
Sbjct: 72   LWVIWVKRYLLRGETLWDAKDTGMGSWAWRKLLKFRPLAKNFLLMDVKDGATARFWTDLW 131

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCDKS 774
             PKG+L +   +    +L  S D ++   + E  W F    +  +   + +++      +
Sbjct: 132  FPKGRLIEIAGELGTQKLGISRDMRICDVLREGQWRFRRCRDRHIQSLVTEIRTFQLTLT 191

Query: 773  VS-DLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
               D + WK  +  +                    +WS +VWF   +PR +FITWL++ +
Sbjct: 192  DGRDEVLWKRGANDYGTKFHSSETWDQIRVHKDTVIWSKIVWFPQGVPRFAFITWLAVKD 251

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLL 459
            RL T  +  +WG  Q   C+ C + D  E  +H+F +C +  T+W+ ++
Sbjct: 252  RLATGHRTRRWG--QPEHCLFCGEPD--ETRDHLFFACPYTFTLWLKMV 296



 Score = 27.3 bits (59), Expect(2) = 7e-26
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -3

Query: 357 KLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEVKVKMLS 226
           +L+L   +Y +WRERN     + + + +Q+   +   V+ ++ S
Sbjct: 329 RLVLQVTIYFIWRERNERKHGTSHKTVEQLAKLVDKTVRNRISS 372


>ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403339 [Brassica napus]
          Length = 1455

 Score =  115 bits (289), Expect(2) = 9e-26
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 4/232 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  W+ +N IK R FW  +    +SW W+ LL  +  +  F M  +G+G  T    D+W
Sbjct: 1135 LWGCWIKENRIKNRIFWEQEQKGHSSWTWKALLSLRNAASAFLMSRVGNGNQTSFWHDVW 1194

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVD--CD 780
             P G L          EL   +D ++   V+E GW    A  ++     + +  V   C 
Sbjct: 1195 TPFGPLIRHFGPQGPQELGIPTDARICSVVNENGWKLPSARSDEAEALQIHLASVSLPCA 1254

Query: 779  KSVSDLIAWKPSS--LGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
             +  D   W+  +  L                 + +W+S VW+K  IPR +F  W++   
Sbjct: 1255 SAHDDEFLWRVDNVELDAFSTKLTWESLRPRAPIQLWTSNVWYKGAIPRHAFHFWVTHLN 1314

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLKM 450
            RL TR+++  WG+    +C LCD  +  E+ +HIF  C+    +W  ++ ++
Sbjct: 1315 RLPTRSRLKAWGLQIQTSCCLCDRFE--ENRDHIFLRCEVSQHLWAMIIRRL 1364



 Score = 30.0 bits (66), Expect(2) = 9e-26
 Identities = 17/76 (22%), Positives = 35/76 (46%)
 Frame = -3

Query: 450  GYTRHLNSCWKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQ 271
            GY       W    DW  +  K       +++L+  + +Y +W ERNN +  +  SS++ 
Sbjct: 1365 GYRTLSFHSWNAFSDWLGS--KDSICPTTLRRLVAQAVIYSLWHERNNRLHNNISSSSEV 1422

Query: 270  VGYAILSEVKVKMLSR 223
            +   +   ++  +L+R
Sbjct: 1423 IFKLLDRRIRDAILAR 1438


>ref|XP_010507511.1| PREDICTED: uncharacterized protein LOC104784146 [Camelina sativa]
          Length = 1269

 Score =  105 bits (262), Expect(2) = 1e-25
 Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  W+ +N+ K ++FW   V +  S     +L+ K   ++F    +GDG +     D W
Sbjct: 874  LWVAWLRENIFKRKNFWETNVSSRFSKAINSMLQLKPTLQNFLKCEVGDGSTASFWYDNW 933

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCDKS 774
               G L  ++     ++L      KV       GW    A   +    +V + E+    +
Sbjct: 934  TDFGPLITFLGVAGPSQLRVRRSTKVTEASRNGGWNLPPARSINGQSLMVALTELPAPVA 993

Query: 773  VS--DLIAWKPSSLGFXXXXXXXXXXXXXXXLCV---WSSLVWFKSHIPRQSFITWLSLH 609
                D+  W+ +S  F                     W+ +VWFK H+PR SFI WL++ 
Sbjct: 994  SRGPDIFLWRKASGNFSHTFSSKETWEQVRHRSPLVPWAKIVWFKQHVPRYSFIAWLAML 1053

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLKMVT 444
             RL TR ++ +WG+    +CVLC     VE   H+F  C F S +W  L  K ++
Sbjct: 1054 NRLPTRDRLHRWGMNVPTSCVLCSSG--VESHAHLFFECPFASNLWGFLAAKFIS 1106



 Score = 40.0 bits (92), Expect(2) = 1e-25
 Identities = 19/52 (36%), Positives = 33/52 (63%)
 Frame = -3

Query: 381  QGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEVKVKMLS 226
            Q  +  I KL+L + +YHVW+ERN+ IF +  S+  Q+  A+   ++ ++LS
Sbjct: 1127 QANLTAILKLLLTTILYHVWKERNSRIFANAASTIHQLHTAVDRAMRDRLLS 1178


>ref|XP_013723740.1| PREDICTED: uncharacterized protein LOC106427557 [Brassica napus]
          Length = 1356

 Score =  119 bits (297), Expect(2) = 2e-25
 Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++G   W  +     SW WR+LL+ + ++K+F +  + DG +    +DLW
Sbjct: 1064 LWVIWVKRYLLRGETLWDAKDTGMGSWAWRKLLKFRPLAKNFLLMDVKDGATARFWTDLW 1123

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCDKS 774
             PKG+L +   +    +L  S D ++   + E  W F    +  +   + +++      +
Sbjct: 1124 FPKGRLIEIAGELGTQKLGISRDMRICDVLREGQWRFRRCRDRHIQSLVTEIRTFQLTLT 1183

Query: 773  VS-DLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
               D + WK  +  +                    +WS +VWF   +PR +FITWL++ +
Sbjct: 1184 DGRDEVLWKRGANDYGTKFHSSETWDQIRVHKDTVIWSKIVWFPQGVPRFAFITWLAVKD 1243

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLL 459
            RL T  +  +WG  Q   C+ C + D  E  +H+F +C +  T+W+ ++
Sbjct: 1244 RLATGHRTRRWG--QPEHCLFCGEPD--ETRDHLFFACPYTFTLWLKMV 1288



 Score = 26.2 bits (56), Expect(2) = 2e-25
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 357  KLILNSFVYHVWRERNNIIFQSKYSSADQV 268
            +L+L   +Y +WRERN     + + + +Q+
Sbjct: 1321 RLVLQVTIYFIWRERNERKHGTSHKTVEQL 1350


>ref|XP_013716278.1| PREDICTED: uncharacterized protein LOC106419990 [Brassica napus]
          Length = 340

 Score =  112 bits (279), Expect(2) = 2e-25
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W DW     + G+ FWS+      SW W +LLE + ++  F    +G+G+S     D+W
Sbjct: 22   LWVDWHQSTHLNGQSFWSITATASDSWAWHKLLELRPLALQFCKSQLGNGKSASFWFDVW 81

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGW---YFHEALEEDLSHTIVQMKEVDC 783
             P G+L  ++       L    +  VA  +    W   +    +E DL H  +   ++  
Sbjct: 82   SPLGQLIKYIGPAGPRTLRIRENAHVADAITGSNWSLPHPRSQMEVDL-HVYLTTIDLPL 140

Query: 782  DKSVSDLIAWKPSSLGFXXXXXXXXXXXXXXXLCV--WSSLVWFKSHIPRQSFITWLSLH 609
               V D   W      F                 +  W  +VWFK  IP+ SF  W++ +
Sbjct: 141  PNDVDDKYVWVAGDSNFLDFRSSSTWDVLRPRQDIKTWVDVVWFKGAIPKHSFNMWIANY 200

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIW 471
            +R+ TR+++V WG+   A C +C + D  E  +H+  +CD+   IW
Sbjct: 201  DRMPTRSRLVAWGLPISAACPICSNFD--ETRDHLLLTCDYSLVIW 244



 Score = 33.1 bits (74), Expect(2) = 2e-25
 Identities = 15/72 (20%), Positives = 35/72 (48%)
 Frame = -3

Query: 423 WKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQVGYAILSEV 244
           W + + W   A   +  ++ ++K+     +YH+W++RNN++   +      V   I  E+
Sbjct: 261 WSELLSWIRAATSRR--LSLLRKIATQGVIYHIWKQRNNMVHNQQLIPPAAVFIIIDKEI 318

Query: 243 KVKMLSRSCKVG 208
           +  + +R  + G
Sbjct: 319 RNIISARRRRKG 330


>ref|XP_013700461.1| PREDICTED: uncharacterized protein LOC106404277 [Brassica napus]
          Length = 1050

 Score =  124 bits (310), Expect = 2e-25
 Identities = 56/238 (23%), Positives = 119/238 (50%), Gaps = 5/238 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + +++G  FW  +V    SW W++LL+ + ++K F    + +G++    +D+W
Sbjct: 784  LWVQWVKQTILRGESFWDARVGAVGSWVWKKLLQLRPLAKQFLCMEVRNGKTVGFWTDIW 843

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQM--KEVDCD 780
             P G+L + + +    +L    + K+A  +  + W F  + +  +   + Q+  K +   
Sbjct: 844  LPIGRLIEVIGERGTQKLGIVRNAKIADVLVNDQWRFRNSRDSSIEQVLAQVKAKPLVLA 903

Query: 779  KSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLH 609
             +V D + WK   + +                     W+ L+WFK  +PR +F+TWL++ 
Sbjct: 904  PNVDDGVKWKRGDVEYGSEFSAYRTWNMVRGQNTKVPWAKLIWFKQGVPRYAFVTWLAVK 963

Query: 608  ERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLKMVTLGI 435
            +RL T +++  WG++Q   C  C + +  E  +H+F +C +   +W+ ++  ++  G+
Sbjct: 964  DRLSTGSRMQTWGVIQ--GCTFCGEPE--ESRDHLFFACPYTYGLWLQIVGSLLRPGL 1017



 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 24/83 (28%), Positives = 47/83 (56%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + +++G  FW  +V    SW W++LL+ + ++K F    + +G++    +D+W
Sbjct: 673  LWVQWVKQTILRGESFWDARVGAVGSWVWKKLLQLRPLAKQFLCMEVRNGKTVGFWTDIW 732

Query: 953  HPKGKLTDWVSQDSINELCFSSD 885
             P G+L +  S+ +  E+C   D
Sbjct: 733  FPIGRLIE--SKVAWEEVCKPKD 753


>ref|XP_010549579.1| PREDICTED: uncharacterized protein LOC104820718 [Tarenaya
            hassleriana]
          Length = 649

 Score =  112 bits (279), Expect(2) = 5e-25
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  W   NLIK + FWSL   +  SW WRRLL+ + +++ F    + +G+      D W
Sbjct: 320  LWVAWTKANLIKRKSFWSLGAQSRGSWAWRRLLKIRHLARPFLRCRLRNGQVCSFWFDSW 379

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVA-YFVDEEGWYFHEALEEDLSHTIVQMKEVDCDK 777
             P G L   + +    +L       VA  F    GW    A  +      +++ ++    
Sbjct: 380  LPSGPLISTLGELGPIQLGIPLSASVADVFSSSSGWRLPPARNDAAERVYMELLDMPLPN 439

Query: 776  --SVSDLIAWKPS-SLGFXXXXXXXXXXXXXXXLCV---WSSLVWFKSHIPRQSFITWLS 615
                 D   W  S SL                 L     W  +VWF   IP+ SF+ WL+
Sbjct: 440  PSGPQDSFYWSSSFSLSISPLFSTSRAWKLHRSLAPLVPWFKVVWFIGAIPKHSFLLWLA 499

Query: 614  LHERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLL 459
               RL TR +++ WG+   A+C+LCDD+D  E  +H+F  C+F   +W+ ++
Sbjct: 500  AKNRLPTRDRLIAWGLNISASCLLCDDQD--ESLDHLFFRCNFSGQLWLSII 549



 Score = 31.6 bits (70), Expect(2) = 5e-25
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = -3

Query: 417 DEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERN 310
           D + W +T F  QG    I KLIL + VY VWRERN
Sbjct: 565 DCLGW-ITHF--QGNCGLILKLILQACVYSVWRERN 597


>ref|XP_009139889.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 502

 Score =  104 bits (259), Expect(2) = 8e-25
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV+  L+K   FW ++  +  SW WR+LL+ + ++ +F    I DG++ +   D W
Sbjct: 180  LWVSWVNHYLLKYNSFWDVRDESKGSWIWRKLLKLRDLAYEFLRVDIKDGKTCYFWFDDW 239

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALE---EDLSHTIVQMKEVDC 783
              KG+L +         L      KV   V    W           +L   I+ +     
Sbjct: 240  LGKGRLINVTGPAGTTYLGVMRHAKVCDAVAGNEWNIRGGRSRRFHELYDNILALAPPAP 299

Query: 782  DKSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSL 612
            DK   D+I WK     +                     W  +VWF   +PR SFI WL++
Sbjct: 300  DKG-KDIILWKHGDDDYRTTFSAARTWDQLRIKRSKVEWCRVVWFAQGVPRFSFIAWLAI 358

Query: 611  HERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIW 471
              RL T  ++  WGI+Q   CVLC ++D  E  +H+F +C +  TIW
Sbjct: 359  RNRLSTGDRMRAWGIVQ--GCVLCGERD--ETRDHLFFACPYSYTIW 401



 Score = 38.5 bits (88), Expect(2) = 8e-25
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -3

Query: 441 RHLNSCWKDEIDWCVTAFKGQG---LVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQ 271
           R++N  W+    W V   +  G   L   + K++  + VYH+WRERN    Q  + + DQ
Sbjct: 411 RNINPDWQ----WTVNHLQRMGRKSLDTILAKMLFQTVVYHIWRERNARRHQQSWKTTDQ 466

Query: 270 VGYAILSEVKVKMLSRSCK 214
           +   I   V+ ++ S   K
Sbjct: 467 LSRLIDKAVRNRISSSRYK 485


>ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363284 [Brassica napus]
          Length = 724

 Score =  116 bits (290), Expect(2) = 1e-24
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV + L++G   W ++     SW WR+LL  + ++K +    IG+G+     +D+W
Sbjct: 402  LWGAWVKRYLLRGETIWDVKDTGLGSWNWRKLLRYRSLAKQYIRMSIGNGQLVRFWTDIW 461

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCD-K 777
             PKG+L +        ++  + + ++   + +  W   +  ++ ++  + ++K       
Sbjct: 462  FPKGRLLEITGAFGTQKMGIARNARICDVLVDGVWRLRDCRDQQIAALVQEIKSTPITLN 521

Query: 776  SVSDLIAWK--PSSLGFXXXXXXXXXXXXXXXLCV-WSSLVWFKSHIPRQSFITWLSLHE 606
              +D + WK  P S G                  V WS LVWF   +PR +FITWL+  +
Sbjct: 522  HEADGVKWKLGPDSYGDCFISAEVLQQIRSRKGKVPWSKLVWFPQRVPRYAFITWLAFRD 581

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWI 468
            RL T  +  KWG  Q   C+ C + D  E  +H+F +C +  T+W+
Sbjct: 582  RLSTGHRTSKWGSPQ--GCLHCGEPD--ETRDHLFFACPYTYTLWL 623



 Score = 26.2 bits (56), Expect(2) = 1e-24
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -3

Query: 408 DWCVTAFKGQ-GLVARIK----KLILNSFVYHVWRERNNIIFQSKYSSADQV 268
           DW +T  + Q G   RI     +++L   +Y++WRE N+    +     DQ+
Sbjct: 637 DWGITILRLQTGTYDRITFILLRMVLQVTIYYIWREINDRRHNNTAKPVDQL 688


>ref|XP_009130051.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 627

 Score =  112 bits (279), Expect(2) = 1e-24
 Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 4/232 (1%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  W+ K  I     WSL+  N  S  WR LL  + ++ +F    +G+GE+T    D+W
Sbjct: 306  LWASWIKKYRIGDESLWSLEAKNAGSGTWRSLLNLRSLATNFLRAEVGNGETTSFWWDIW 365

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCDKS 774
             P G+L +        EL       VA   DE GW    A         + +  +    S
Sbjct: 366  TPLGRLINIFGDTGPRELSIPLFASVADSCDENGWRLRGARSPAAETLHIHLTSIHLPSS 425

Query: 773  --VSDLIAW--KPSSLGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHE 606
                D+  W     +L                    WS+ VWFK   PR +F+ W++ ++
Sbjct: 426  SQTEDVFYWLIDGENLDDFSASRTWEAIRNRAPAVTWSNSVWFKMATPRHAFLMWIAQND 485

Query: 605  RLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIWIGLLLKM 450
            R+ TR ++  WG+   + C LCD     E  +H+   CD    +W+ +L ++
Sbjct: 486  RMPTRVRLASWGLGVSSNCCLCD--SAPETRDHLLLRCDISKQVWVLILRRL 535



 Score = 30.4 bits (67), Expect(2) = 1e-24
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 450 GYTRHLNSCWKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQ 271
           GYT      W   I+W         L+  +K+++ ++ +Y +W ERN  +     SS  Q
Sbjct: 536 GYTHSCFITWTSFIEWLSLTDFTTPLI--LKRIVAHATIYSIWGERNKRLHDG-ISSTPQ 592

Query: 270 VGYAIL 253
           + Y ++
Sbjct: 593 MLYKLI 598


>ref|XP_010058837.1| PREDICTED: uncharacterized protein LOC104446716 [Eucalyptus grandis]
          Length = 1688

 Score = 99.0 bits (245), Expect(2) = 1e-24
 Identities = 58/220 (26%), Positives = 98/220 (44%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  W+H N +K  +FW    P+  SW W+++L  +   +  F   +GDG+ST +  D W
Sbjct: 834  LWCRWIHSNFLKKHNFWVATQPSVCSWNWKKILHLRGCCRQSFEWKVGDGQSTSLWFDSW 893

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALEEDLSHTIVQMKEVDCDKS 774
             P G L   V Q  + +    +   VA+     G      L ED   ++  +  VD D+ 
Sbjct: 894  LPCGPLHLQVPQSFLLDPDVPTKATVAFLYSYAGRSCKSRL-EDYGFSLPPL-SVDNDRF 951

Query: 773  VSDLIAWKPSSLGFXXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSLHERLKT 594
            V     W+  S G                   W+  VW K   PR  F+ WL   +RL T
Sbjct: 952  V-----WRQDSSGAFSVASAWNVIRTSKAKAPWTPFVWDKDVAPRFQFLLWLITKDRLPT 1006

Query: 593  RAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTI 474
            ++ ++ +G ++ + C  C+ +   +  NH++  C+  +TI
Sbjct: 1007 QSLLLSYGRIEYSACTFCNTQP--DSTNHLYFDCNISTTI 1044



 Score = 43.1 bits (100), Expect(2) = 1e-24
 Identities = 28/112 (25%), Positives = 53/112 (47%)
 Frame = -3

Query: 432  NSCWKDEIDWCVTAFKGQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQVGYAIL 253
            N  W + + W +    G+    R+ +    +  Y +W++RN +IF+ +      +   ++
Sbjct: 1058 NGTWAENLAWAMKFLAGKDFFHRLSRYSFGALCYLIWKKRNAMIFRGESLDIPALKNHLI 1117

Query: 252  SEVKVKMLSRSCKVGDSPQSRCFMERLQVSCEFVLPSIIFMPWLFPENNFIM 97
              VK K ++    V D+P++R    RLQ     + PSI  +  L P + FI+
Sbjct: 1118 KMVKDKAITYK-DVPDNPRNR----RLQRGWN-LDPSIFTLSNLIPASTFIL 1163


>ref|XP_009121379.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 582

 Score =  102 bits (254), Expect(2) = 2e-24
 Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
 Frame = -1

Query: 1133 IWTDWVHKNLIKGRDFWSLQVPNDASWYWRRLLEQKKVSKDFFMHIIGDGESTWILSDLW 954
            +W  WV+  L+K   FW ++  +  SW WR+LL+ + ++ +F    I DG++ +   D W
Sbjct: 260  LWVSWVNHYLLKYNSFWDVRDESKGSWIWRKLLKLRDLAYEFLRVDIKDGKTCYFWFDEW 319

Query: 953  HPKGKLTDWVSQDSINELCFSSDCKVAYFVDEEGWYFHEALE---EDLSHTIVQMKEVDC 783
              KG+L +         L      KV   V    W           +L  +I+ ++    
Sbjct: 320  LGKGRLINVTGPAGTTYLGVMRHAKVCDAVAGNEWNIRGGRSRRFHELYDSILALEPPAP 379

Query: 782  DKSVSDLIAWKPSSLGF---XXXXXXXXXXXXXXXLCVWSSLVWFKSHIPRQSFITWLSL 612
            DK    +I WK     +                     W  +VWF   +PR SFITWL++
Sbjct: 380  DKG-KYIIMWKHGDDDYRKTFSAARTWDQLRIKRSKVEWCRVVWFPQGVPRFSFITWLAI 438

Query: 611  HERLKTRAKIVKWGIMQVATCVLCDDKDCVEDGNHIFHSCDFVSTIW 471
              RL T  ++  WGI+Q   CVLC ++D  E  +H F +C +  TIW
Sbjct: 439  RNRLSTGDRMRAWGIVQ--GCVLCGERD--ETRDHHFFACPYSYTIW 481



 Score = 39.3 bits (90), Expect(2) = 2e-24
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = -3

Query: 441 RHLNSCWKDEIDWCVTAFK---GQGLVARIKKLILNSFVYHVWRERNNIIFQSKYSSADQ 271
           R++N  W+    W V   +   G+ L   + K++  + VYH+WRERN    Q  + + DQ
Sbjct: 491 RNINPDWQ----WTVNHLQRMGGKSLDTILAKMLFQTVVYHIWRERNARRHQQSWKTTDQ 546

Query: 270 VGYAILSEVKVKMLS 226
           +   I   V+ ++ S
Sbjct: 547 LSRLIDKAVRNRISS 561