BLASTX nr result

ID: Papaver29_contig00056226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00056226
         (428 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDY39486.1| BnaC03g60960D [Brassica napus]                         60   6e-07
ref|YP_003330957.1| photosystem II protein D2 [Parthenium argent...    60   6e-07
ref|XP_006288426.1| hypothetical protein CARUB_v10001685mg [Caps...    60   6e-07
ref|XP_002887103.1| hypothetical protein ARALYDRAFT_894439 [Arab...    60   6e-07
gb|KFK39127.1| hypothetical protein AALP_AA3G204400 [Arabis alpina]    60   8e-07
dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]             57   4e-06
gb|AAS46043.1| photosystem II protein D2 (chloroplast) [Oryza sa...    57   5e-06

>emb|CDY39486.1| BnaC03g60960D [Brassica napus]
          Length = 640

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRI MTIALG+FTKDEKDLFD MDDWLR+
Sbjct: 1  MNRRIAMTIALGKFTKDEKDLFDIMDDWLRR 31


>ref|YP_003330957.1| photosystem II protein D2 [Parthenium argentatum]
          gi|269924833|gb|ACZ52706.1| photosystem II protein D2
          [Parthenium argentatum]
          Length = 199

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRITMTIALG+FTKDE DLFD MDDWLR+
Sbjct: 1  MNRRITMTIALGKFTKDENDLFDIMDDWLRR 31


>ref|XP_006288426.1| hypothetical protein CARUB_v10001685mg [Capsella rubella]
          gi|482557132|gb|EOA21324.1| hypothetical protein
          CARUB_v10001685mg [Capsella rubella]
          Length = 274

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRI MTIALG+FTKDEKDLFD MDDWLR+
Sbjct: 1  MNRRIAMTIALGKFTKDEKDLFDIMDDWLRR 31


>ref|XP_002887103.1| hypothetical protein ARALYDRAFT_894439 [Arabidopsis lyrata subsp.
          lyrata] gi|297332944|gb|EFH63362.1| hypothetical
          protein ARALYDRAFT_894439 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 286

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRI MTIALG+FTKDEKDLFD MDDWLR+
Sbjct: 1  MNRRIAMTIALGKFTKDEKDLFDIMDDWLRR 31


>gb|KFK39127.1| hypothetical protein AALP_AA3G204400 [Arabis alpina]
          Length = 80

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NR ITMTIALG+FTKDEKDLFD MDDWLR+
Sbjct: 1  MNRTITMTIALGKFTKDEKDLFDIMDDWLRR 31


>dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]
          Length = 359

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRITMTIALG+ TKDE DLFD MDDWLR+
Sbjct: 1  MNRRITMTIALGKVTKDENDLFDIMDDWLRR 31


>gb|AAS46043.1| photosystem II protein D2 (chloroplast) [Oryza sativa Indica
          Group] gi|42795542|gb|AAS46108.1| photosystem II
          protein D2 (chloroplast) [Oryza sativa Japonica Group]
          gi|42795606|gb|AAS46171.1| photosystem II protein D2
          (chloroplast) [Oryza sativa Japonica Group]
          gi|290790561|gb|ADD62821.1| photosystem II protein D2
          (chloroplast) [Oryza sativa Japonica Group]
          gi|290790630|gb|ADD62889.1| photosystem II protein D2
          (chloroplast) [Oryza meridionalis]
          gi|290790699|gb|ADD62957.1| photosystem II protein D2
          (chloroplast) [Oryza australiensis]
          gi|290790836|gb|ADD63092.1| photosystem II protein D2
          (chloroplast) [Microlaena stipoides]
          Length = 359

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -3

Query: 99 LNRRITMTIALGRFTKDEKDLFDTMDDWLRK 7
          +NRRITMTIALGR TK+E DLFD MDDWLR+
Sbjct: 1  MNRRITMTIALGRVTKEENDLFDIMDDWLRR 31


Top