BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00055723
         (712 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010113352.1| Retrovirus-related Pol polyprotein from tran...    45   1e-06

>ref|XP_010113352.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587949157|gb|EXC35359.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 3263

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
 Frame = -1

Query: 706 LLNSMEHSVYQVFKAFRTVSDLWASLNDYANPKLLNYRKYQIYCEFTQIKQGKGQSVDEY 527
           L+NSM + + + F  F T  ++W +  +  +        +Q+       +QG+ QSV +Y
Sbjct: 96  LINSMNNDIGENFLLFGTAKEIWDAAKETYSSSENTSELFQVESALHDFRQGE-QSVTQY 154

Query: 526 YSNFIDLWNELKSLYEDAFNSQGERLAKAKERYRQETE---VFQFMWGL 389
           YS  I  W +L     D F +   +       YRQ  E   +F+F  GL
Sbjct: 155 YSTLIRYWQQL-----DLFETHSWKCPDDAATYRQVVEQKRLFKFFLGL 198



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 24/81 (29%), Positives = 35/81 (43%)
 Frame = -2

Query: 342 VFDTNPLPSLSKVSFLARDYESLLNMSNQSKALEKHGSGMLSSAAMWRLLHDQGPHEDGQ 163
           +  T PLPSL +     R  ES   +   SK  E+H S + +SA   R  +  G     +
Sbjct: 209 IMGTKPLPSLREAFSEVRREESRKKVMMGSK--EQHASPLDASALAVRSSNSNGGDHQKR 266

Query: 162 IGNGCTYCGYTNHEVSACYQI 100
               C YC    H   AC+++
Sbjct: 267 ERPWCDYCKKLGHYKEACWKL 287