BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00053895
         (685 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme...   142   2e-31
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      136   1e-29
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos...   135   3e-29
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   132   2e-28
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      131   3e-28
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   130   6e-28
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   130   6e-28
gb|KDP38127.1| hypothetical protein JCGZ_04770 [Jatropha curcas]      130   6e-28
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   130   7e-28
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G...   130   1e-27
ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabi...   127   6e-27
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme...   124   7e-26
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   122   2e-25
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   122   2e-25
ref|XP_010476552.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   121   5e-25
ref|XP_013585196.1| PREDICTED: RNA-dependent RNA polymerase 1 [B...   120   6e-25
ref|XP_010462708.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   120   8e-25
ref|XP_013696632.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   120   1e-24
emb|CDY41107.1| BnaC05g10980D [Brassica napus]                        120   1e-24
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   119   1e-24

>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera] gi|719962527|ref|XP_010275424.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera] gi|719962530|ref|XP_010275500.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera] gi|719962533|ref|XP_010275583.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera] gi|719962536|ref|XP_010275643.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera] gi|719962539|ref|XP_010275710.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nelumbo
           nucifera]
          Length = 1136

 Score =  142 bits (358), Expect = 2e-31
 Identities = 72/139 (51%), Positives = 91/139 (65%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           +  E VKE LE YTG GTVYAL +   K KG     F  VQF +   A+ I++ +N+ LY
Sbjct: 14  VTAEAVKELLERYTGDGTVYALKVRHHKNKGHARFAFVIVQFTTSGSADVITSLVNRRLY 73

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG  YLKVRD+ RD+V KPR+S+  L+   LHFGCQVS + F V+WKG +V V FEFG R
Sbjct: 74  YGTHYLKVRDVERDIVAKPRMSLLSLEHTTLHFGCQVSPEKFSVLWKGADVAVRFEFGLR 133

Query: 59  KLSFLSSYCDVNYKLELSY 3
           +L F  S   ++YKL LSY
Sbjct: 134 RLHFFLSQFPIDYKLGLSY 152


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  136 bits (342), Expect = 1e-29
 Identities = 71/134 (52%), Positives = 88/134 (65%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE YTG+ TVYAL I + K  G     FA VQF    DA  I    NQ LYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKSGR---AFAIVQFTRSSDAGLIIRLANQRLYYGRSY 75

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK R++  D+VPKPRV +  ++   ++FGCQVS++ F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFL 135

Query: 44  SSYCDVNYKLELSY 3
            SYC   YKLEL Y
Sbjct: 136 LSYCSSKYKLELFY 149


>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
           gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
           1 -like protein [Gossypium arboreum]
          Length = 1110

 Score =  135 bits (339), Expect = 3e-29
 Identities = 70/134 (52%), Positives = 88/134 (65%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE YTG+ TVYAL I + K  G     +A VQF    DA  I    NQ LYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKSGR---AYAIVQFTRSSDAGLIIRLANQRLYYGRSY 75

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK R++  D+VPKPRV +  ++   ++FGCQVS++ F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFL 135

Query: 44  SSYCDVNYKLELSY 3
            SYC   YKLEL Y
Sbjct: 136 LSYCSSKYKLELFY 149


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  132 bits (332), Expect = 2e-28
 Identities = 70/136 (51%), Positives = 89/136 (65%)
 Frame = -3

Query: 410 EMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGK 231
           E VK FLE YTGK TVYAL I + K  G     +A VQF    DAE I    NQ LYYG 
Sbjct: 17  EEVKTFLELYTGKETVYALKIRQQKNGGR---AYAIVQFTKSTDAELIIRLTNQRLYYGS 73

Query: 230 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 51
           SYLK R++  D+VPKPR  +  ++   LHFGCQVS++ F+V+W+ ++VTV+F  G RKL 
Sbjct: 74  SYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQ 133

Query: 50  FLSSYCDVNYKLELSY 3
           FL S+  V Y+L+L Y
Sbjct: 134 FLLSHHCVEYRLDLFY 149


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  131 bits (330), Expect = 3e-28
 Identities = 69/134 (51%), Positives = 86/134 (64%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE YTG+ TVYAL I + K  G     FA VQF    DA  I    NQ LYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKSGR---AFAIVQFTRSSDAGLIIRLANQRLYYGRSY 75

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK R++  D+VPKPRV +  ++   ++F C VS++ F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADNVTLNFGTGMRKLEFL 135

Query: 44  SSYCDVNYKLELSY 3
            SYC   YKLEL Y
Sbjct: 136 LSYCSSKYKLELFY 149


>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
           curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
           curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
           curcas]
          Length = 1127

 Score =  130 bits (328), Expect = 6e-28
 Identities = 66/139 (47%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+FLE+++G+GTV+A+ I ++K +G     +A VQF + +DAE I +  N+ L 
Sbjct: 14  VTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRK--YAIVQFQTARDAELIISLTNKRLR 71

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R L  D+VPKPR  +  +    LHFGCQ+S + F V+W G NV+V+F FG R
Sbjct: 72  YGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGTNVSVNFGFGMR 131

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  + YKLELSY
Sbjct: 132 KLQFFLSHGQMGYKLELSY 150


>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
           curcas]
          Length = 1144

 Score =  130 bits (328), Expect = 6e-28
 Identities = 66/139 (47%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+FLE+++G+GTV+A+ I ++K +G     +A VQF + +DAE I +  N+ L 
Sbjct: 31  VTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRK--YAIVQFQTARDAELIISLTNKRLR 88

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R L  D+VPKPR  +  +    LHFGCQ+S + F V+W G NV+V+F FG R
Sbjct: 89  YGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGTNVSVNFGFGMR 148

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  + YKLELSY
Sbjct: 149 KLQFFLSHGQMGYKLELSY 167


>gb|KDP38127.1| hypothetical protein JCGZ_04770 [Jatropha curcas]
          Length = 196

 Score =  130 bits (328), Expect = 6e-28
 Identities = 66/139 (47%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+FLE+++G+GTV+A+ I ++K +G     +A VQF + +DAE I +  N+ L 
Sbjct: 31  VTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRK--YAIVQFQTARDAELIISLTNKRLR 88

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R L  D+VPKPR  +  +    LHFGCQ+S + F V+W G NV+V+F FG R
Sbjct: 89  YGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGTNVSVNFGFGMR 148

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  + YKLELSY
Sbjct: 149 KLQFFLSHGQMGYKLELSY 167


>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
          Length = 1096

 Score =  130 bits (327), Expect = 7e-28
 Identities = 65/139 (46%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+FLE+++G+GTV+A+ I ++K  GP    +A VQF + +DAE I +  N+ L+
Sbjct: 38  VTVDEVKKFLESHSGEGTVFAMKIRETKNGGPRK--YAIVQFQTARDAELIISLTNKRLW 95

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R L  D+VPKPR  +  +    LHFGC +S + F V+W G NV V+F FG R
Sbjct: 96  YGTSYLKARTLDNDIVPKPRTFLHSMDHITLHFGCHISKEKFSVLWTGTNVLVNFGFGMR 155

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  ++YKL+LSY
Sbjct: 156 KLHFFLSHGQMDYKLDLSY 174


>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
           gi|763812161|gb|KJB79013.1| hypothetical protein
           B456_013G029000 [Gossypium raimondii]
          Length = 1110

 Score =  130 bits (326), Expect = 1e-27
 Identities = 69/134 (51%), Positives = 86/134 (64%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE YTG+ TVYAL I + K  G     +A VQF     AE I    NQ LYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKGGR---AYAIVQFTRSSAAELIIRLANQRLYYGRSY 75

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK R++  D+VPKPR  +  ++   ++FGCQVS + F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRAFLHTMERVTVNFGCQVSVEKFYVLWKAENVTLNFGTGMRKLEFL 135

Query: 44  SSYCDVNYKLELSY 3
            SYC   YKLEL Y
Sbjct: 136 VSYCRSKYKLELFY 149


>ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
           gi|587864166|gb|EXB53859.1| RNA-dependent RNA polymerase
           1 [Morus notabilis]
          Length = 1133

 Score =  127 bits (319), Expect = 6e-27
 Identities = 65/136 (47%), Positives = 90/136 (66%)
 Frame = -3

Query: 410 EMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGK 231
           E VKEFLE +TG+GTVYA+ I  +K  G     +A VQF++ + AE I    N  L+YG+
Sbjct: 17  ESVKEFLEGHTGRGTVYAIKIRPTKNGGSRS--YAIVQFMTVETAELIIRLANPRLWYGR 74

Query: 230 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 51
           SYL  R + RD+VPKPR +++ LQ   LHFGCQ+S + F  +W+  NV+VDF  G R+L+
Sbjct: 75  SYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNVSVDFGLGLRRLN 134

Query: 50  FLSSYCDVNYKLELSY 3
           F  +Y  V Y+L+L Y
Sbjct: 135 FYLTYGPVEYRLQLLY 150


>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  124 bits (310), Expect = 7e-26
 Identities = 63/143 (44%), Positives = 90/143 (62%)
 Frame = -3

Query: 431 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSIN 252
           F  ++  + +KEFLE YTG+GT+ AL+I + +         A VQF S + AEFI T   
Sbjct: 10  FPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASM--THAKVQFTSFELAEFIITLCK 67

Query: 251 QWLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 72
           + ++YG++YLK R++  D++PKPR  +  +    LHFGCQ+SD+ F V+WK +NV+V F 
Sbjct: 68  KKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFG 127

Query: 71  FGFRKLSFLSSYCDVNYKLELSY 3
            G RK  F  S+    YKLELSY
Sbjct: 128 SGLRKFYFFLSHGSEEYKLELSY 150


>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
           curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
           curcas]
          Length = 1126

 Score =  122 bits (306), Expect = 2e-25
 Identities = 63/139 (45%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+ LE+++G GTV+A+ I ++K  G     +A VQF + +DAE I  S+N+ + 
Sbjct: 14  VTVDEVKKCLESHSGDGTVFAMKIRETKNGGQRK--YAIVQFQTARDAELI-ISLNKRIR 70

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R LA+D+VP PR  +  +    LHFGC++S + F V+W G NV+V+F FG R
Sbjct: 71  YGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGTNVSVNFGFGLR 130

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  ++YKL+LSY
Sbjct: 131 KLQFFLSHEQMDYKLDLSY 149


>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
           curcas]
          Length = 1150

 Score =  122 bits (306), Expect = 2e-25
 Identities = 63/139 (45%), Positives = 94/139 (67%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLY 240
           + ++ VK+ LE+++G GTV+A+ I ++K  G     +A VQF + +DAE I  S+N+ + 
Sbjct: 38  VTVDEVKKCLESHSGDGTVFAMKIRETKNGGQRK--YAIVQFQTARDAELI-ISLNKRIR 94

Query: 239 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 60
           YG SYLK R LA+D+VP PR  +  +    LHFGC++S + F V+W G NV+V+F FG R
Sbjct: 95  YGTSYLKARTLAKDIVPNPRTFLHSMDHITLHFGCRISKEKFSVLWTGTNVSVNFGFGLR 154

Query: 59  KLSFLSSYCDVNYKLELSY 3
           KL F  S+  ++YKL+LSY
Sbjct: 155 KLQFFLSHEQMDYKLDLSY 173


>ref|XP_010476552.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Camelina sativa]
          Length = 1109

 Score =  121 bits (303), Expect = 5e-25
 Identities = 63/134 (47%), Positives = 84/134 (62%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE  TG GTVYA+ + + K  GP   V+A VQF S++ A  I T   + LYYG+SY
Sbjct: 19  VKNFLERLTGSGTVYAIKVRQPKKGGPR--VYAIVQFTSERHARLIITKAAEGLYYGRSY 76

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK  ++ +D+VPKPR S+  +    ++FGCQVS   F  +W   NV+V F  G RKL F 
Sbjct: 77  LKAFEVEQDIVPKPRASLHSISDLKMYFGCQVSPKKFLTLWSAQNVSVSFGTGMRKLHFA 136

Query: 44  SSYCDVNYKLELSY 3
            S+   +Y+LELSY
Sbjct: 137 MSWYQKDYRLELSY 150


>ref|XP_013585196.1| PREDICTED: RNA-dependent RNA polymerase 1 [Brassica oleracea var.
           oleracea] gi|922491658|ref|XP_013585197.1| PREDICTED:
           RNA-dependent RNA polymerase 1 [Brassica oleracea var.
           oleracea] gi|922573822|ref|XP_013615245.1| PREDICTED:
           RNA-dependent RNA polymerase 1 [Brassica oleracea var.
           oleracea]
          Length = 1110

 Score =  120 bits (302), Expect = 6e-25
 Identities = 65/143 (45%), Positives = 88/143 (61%)
 Frame = -3

Query: 431 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSIN 252
           F + +  E VK FLE  TG GTVYA+ + + +  GP   VFA VQF S++ A  I T  +
Sbjct: 10  FPNGVSAEEVKNFLERLTGSGTVYAIKVRQPRNGGPR--VFAIVQFTSERLARDIVTLAS 67

Query: 251 QWLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 72
           Q L YG+SYLK  ++ +D+VPKPR S+ ++ +  ++FGCQVS     V W   NV V F 
Sbjct: 68  QRLNYGRSYLKAFEVEQDIVPKPRASLHNIPSLKMYFGCQVSPKKLSVFWSAQNVAVSFG 127

Query: 71  FGFRKLSFLSSYCDVNYKLELSY 3
            G RKL F  S+C+  Y+LEL Y
Sbjct: 128 TGMRKLHFSMSWCEKEYRLELPY 150


>ref|XP_010462708.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Camelina sativa]
          Length = 1000

 Score =  120 bits (301), Expect = 8e-25
 Identities = 63/134 (47%), Positives = 83/134 (61%)
 Frame = -3

Query: 404 VKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSINQWLYYGKSY 225
           VK FLE  TG GTVYA+ + + K  GP   VFA VQF  ++ A  I T   + LYYG+SY
Sbjct: 19  VKNFLERLTGSGTVYAIKVRQPKKGGPR--VFAIVQFTFERHARLIITKAAEGLYYGRSY 76

Query: 224 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 45
           LK  ++ +D+VPKPR S+  +    ++FGCQVS   F  +W   NV+V F  G RKL F 
Sbjct: 77  LKAFEMEQDIVPKPRASLHSISDLKMYFGCQVSPKKFLTLWSAQNVSVSFGTGMRKLHFA 136

Query: 44  SSYCDVNYKLELSY 3
            S+   +Y+LELSY
Sbjct: 137 MSWYQKDYRLELSY 150


>ref|XP_013696632.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Brassica napus]
          Length = 1111

 Score =  120 bits (300), Expect = 1e-24
 Identities = 64/143 (44%), Positives = 88/143 (61%)
 Frame = -3

Query: 431 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSIN 252
           F + +  E VK FLE  TG GTVYA+ + + +  GP   VFA VQF S++ A  I T  +
Sbjct: 10  FPNGVSAEEVKNFLERLTGSGTVYAIKVRQPRNGGPR--VFAIVQFTSERLARDIVTLAS 67

Query: 251 QWLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 72
           Q L YG+SYLK  ++ +D+VPKPR S+ ++ +  ++FGCQVS     V W   NV   F 
Sbjct: 68  QRLNYGRSYLKASEVEQDIVPKPRASLHNIPSLKMYFGCQVSPKKLSVFWSAQNVAFSFG 127

Query: 71  FGFRKLSFLSSYCDVNYKLELSY 3
            G RKL F  S+C+ +Y+LEL Y
Sbjct: 128 TGMRKLHFSMSWCEKDYRLELPY 150


>emb|CDY41107.1| BnaC05g10980D [Brassica napus]
          Length = 1093

 Score =  120 bits (300), Expect = 1e-24
 Identities = 64/143 (44%), Positives = 88/143 (61%)
 Frame = -3

Query: 431 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSIN 252
           F + +  E VK FLE  TG GTVYA+ + + +  GP   VFA VQF S++ A  I T  +
Sbjct: 10  FPNGVSAEEVKNFLERLTGSGTVYAIKVRQPRNGGPR--VFAIVQFTSERLARDIVTLAS 67

Query: 251 QWLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 72
           Q L YG+SYLK  ++ +D+VPKPR S+ ++ +  ++FGCQVS     V W   NV   F 
Sbjct: 68  QRLNYGRSYLKASEVEQDIVPKPRASLHNIPSLKMYFGCQVSPKKLSVFWSAQNVAFSFG 127

Query: 71  FGFRKLSFLSSYCDVNYKLELSY 3
            G RKL F  S+C+ +Y+LEL Y
Sbjct: 128 TGMRKLHFSMSWCEKDYRLELPY 150


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  119 bits (299), Expect = 1e-24
 Identities = 64/141 (45%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
 Frame = -3

Query: 419 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNP*VFANVQFISKQDAEFISTSI--NQW 246
           +  E VK+FLE+ TG GTVYAL +   K KG    ++A VQF +K+ A+ I +     + 
Sbjct: 14  VTAEAVKDFLESKTGGGTVYALKLRTPK-KGVGR-LYAIVQFTTKEAADTIISLACRTEK 71

Query: 245 LYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFG 66
           L+YG+SYL  R + +D VP+PR  M  ++   LHFGC++S++ F V+W+G+NVTV+F FG
Sbjct: 72  LWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNFGFG 131

Query: 65  FRKLSFLSSYCDVNYKLELSY 3
            RK++FL S+    Y+LEL Y
Sbjct: 132 MRKINFLLSHLGEEYRLELDY 152