BLASTX nr result
ID: Papaver29_contig00053644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00053644
(502 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme... 57 9e-19
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme... 57 9e-19
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme... 55 1e-16
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme... 55 1e-16
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme... 50 8e-15
ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polyme... 47 1e-14
ref|XP_008242502.1| PREDICTED: probable RNA-dependent RNA polyme... 47 1e-14
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 47 4e-14
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 50 5e-14
ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polyme... 53 6e-14
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme... 48 6e-14
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme... 48 6e-14
ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Mor... 50 9e-14
ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polyme... 54 2e-13
ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polyme... 54 2e-13
gb|KDP33811.1| hypothetical protein JCGZ_07382 [Jatropha curcas] 54 2e-13
ref|XP_011659949.1| PREDICTED: probable RNA-dependent RNA polyme... 50 1e-12
ref|XP_011659950.1| PREDICTED: probable RNA-dependent RNA polyme... 50 1e-12
ref|XP_011659951.1| PREDICTED: probable RNA-dependent RNA polyme... 50 1e-12
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 53 1e-12
>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Nelumbo nucifera]
Length = 1045
Score = 57.4 bits (137), Expect(3) = 9e-19
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -2
Query: 387 NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 241
N +QKYK++LY A QS R ++IF D+LAIYH+CYD A+ GV+K
Sbjct: 960 NEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEK 1008
Score = 54.7 bits (130), Expect(3) = 9e-19
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 251 G*KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 129
G +KC F W+VAGEALC Y QDG + +CS+S+LRE+L+
Sbjct: 1005 GVEKCSFAWKVAGEALCMLYTIKQDGGSIICSQSILRELLS 1045
Score = 27.7 bits (60), Expect(3) = 9e-19
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 493 FEQDVPEHCIAFWREQHNPYKTDMCRALNNVG-AKGQSADAEI 368
F+ +V E C+ W+ +N Y+ +M A+ G AK SA+ I
Sbjct: 921 FDGEVAEACMEKWQMHYNEYRDEMKSAMELDGEAKNASANEVI 963
>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Nelumbo nucifera]
Length = 1022
Score = 57.4 bits (137), Expect(3) = 9e-19
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -2
Query: 387 NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 241
N +QKYK++LY A QS R ++IF D+LAIYH+CYD A+ GV+K
Sbjct: 937 NEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEK 985
Score = 54.7 bits (130), Expect(3) = 9e-19
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 251 G*KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 129
G +KC F W+VAGEALC Y QDG + +CS+S+LRE+L+
Sbjct: 982 GVEKCSFAWKVAGEALCMLYTIKQDGGSIICSQSILRELLS 1022
Score = 27.7 bits (60), Expect(3) = 9e-19
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 493 FEQDVPEHCIAFWREQHNPYKTDMCRALNNVG-AKGQSADAEI 368
F+ +V E C+ W+ +N Y+ +M A+ G AK SA+ I
Sbjct: 898 FDGEVAEACMEKWQMHYNEYRDEMKSAMELDGEAKNASANEVI 940
>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Nicotiana sylvestris]
Length = 1023
Score = 55.5 bits (132), Expect(3) = 1e-16
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -2
Query: 387 NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 241
N ++KYK++LY APE QS RK +DIF +ALA+YH+ YD A+ Y ++K
Sbjct: 938 NEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEK 987
Score = 40.8 bits (94), Expect(3) = 1e-16
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNN 404
LP F+ ++P+ C WRE++ YK DM A+N+
Sbjct: 896 LPCFDVEIPDECTTLWRERYEEYKKDMTMAMNS 928
Score = 36.2 bits (82), Expect(3) = 1e-16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 132
+KC F W+VAG ALC + Q F S+L++IL
Sbjct: 986 EKCGFAWKVAGSALCRIHAMYQKENAFPILPSILQDIL 1023
>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
[Nicotiana sylvestris]
Length = 1021
Score = 55.5 bits (132), Expect(3) = 1e-16
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -2
Query: 387 NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 241
N ++KYK++LY APE QS RK +DIF +ALA+YH+ YD A+ Y ++K
Sbjct: 936 NEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEK 985
Score = 40.8 bits (94), Expect(3) = 1e-16
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNN 404
LP F+ ++P+ C WRE++ YK DM A+N+
Sbjct: 894 LPCFDVEIPDECTTLWRERYEEYKKDMTMAMNS 926
Score = 36.2 bits (82), Expect(3) = 1e-16
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 132
+KC F W+VAG ALC + Q F S+L++IL
Sbjct: 984 EKCGFAWKVAGSALCRIHAMYQKENAFPILPSILQDIL 1021
>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
probable RNA-dependent RNA polymerase 3 [Solanum
lycopersicum]
Length = 1014
Score = 50.1 bits (118), Expect(3) = 8e-15
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = -2
Query: 387 NLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAK-HYGVKK 241
N ++KYK +LY A E Q+ RK +DIF +ALAIYH+ YD A+ Y ++K
Sbjct: 929 NEVIKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARITYSIEK 978
Score = 42.0 bits (97), Expect(3) = 8e-15
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALN 407
LP FE ++P+ C+ WR ++ YK DM RA+N
Sbjct: 887 LPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMN 918
Score = 34.3 bits (77), Expect(3) = 8e-15
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 132
+KC F W+VAG ALC + + + SVL+EIL
Sbjct: 977 EKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEIL 1014
>ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
bretschneideri]
Length = 1088
Score = 47.4 bits (111), Expect(3) = 1e-14
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2
Query: 372 KYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVKK 241
KY+E+LY + ++S R +IF +A+AIY++CYD A+ GV K
Sbjct: 1008 KYREILYGGDDFDKSTRPMGEIFDEAIAIYNVCYDYARSAGVSK 1051
Score = 42.4 bits (98), Expect(3) = 1e-14
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADA 374
LP F+ +VPE C+ WREQ+ Y+ DM AL + +G++ A
Sbjct: 960 LPIFDVEVPEECLIKWREQYKQYRCDMTSALRDGDQEGKNQAA 1002
Score = 36.2 bits (82), Expect(3) = 1e-14
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 251 G*KKCYFVWRVAGEALCE-YYLGMQDGRTFVCSESVLREIL 132
G KC F W+VAG AL + +++ D F+ S SVL+EIL
Sbjct: 1048 GVSKCGFAWKVAGSALFKLHFIKQGDACPFLVSPSVLKEIL 1088
>ref|XP_008242502.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Prunus mume]
Length = 1080
Score = 46.6 bits (109), Expect(3) = 1e-14
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 242 KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 132
KC F W+VAG ALC+YY+ Q RT S SVL++++
Sbjct: 1044 KCCFAWKVAGSALCKYYMNKQGARTIEVSFSVLKDLV 1080
Score = 41.6 bits (96), Expect(3) = 1e-14
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRAL--NNVGAKGQSAD 377
LP F+ +VPE C+ WRE H Y+++M A+ N+ +K +AD
Sbjct: 951 LPMFDVEVPEECLRKWREHHQHYRSEMSSAMQDNDRDSKNNAAD 994
Score = 37.7 bits (86), Expect(3) = 1e-14
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 375 QKYKEVLYQ-APELNQSPRKEKDIFMDALAIYHICYDEAKHYG 250
+KYKE+LY A +L S R +IF ALAIY + YD A G
Sbjct: 998 RKYKEILYGGAEDLENSTRPLHEIFNAALAIYRVTYDHAISQG 1040
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 47.0 bits (110), Expect(3) = 4e-14
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -3
Query: 242 KCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREIL 132
KC F W+VAG ALC+YY+ Q RT S SVL++++
Sbjct: 762 KCCFAWKVAGSALCKYYMNKQGARTIEASFSVLKDLV 798
Score = 39.7 bits (91), Expect(3) = 4e-14
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 378 MQKYKEVLYQ-APELNQSPRKEKDIFMDALAIYHICYDEAKHYG 250
++KYKE+LY A +L S R +IF +ALAIY + YD A G
Sbjct: 715 LRKYKEILYGGAEDLENSTRPLHEIFDEALAIYRVTYDHAISQG 758
Score = 37.4 bits (85), Expect(3) = 4e-14
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRAL--NNVGAKGQSAD 377
LP F+ +VPE C+ WRE + Y+++M A+ ++ +K +AD
Sbjct: 669 LPMFDVEVPEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAAD 712
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 50.4 bits (119), Expect(3) = 5e-14
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 262
+ KYK++LY A E +SPRK +DIF +ALAIYH+ Y+ A
Sbjct: 1119 INKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFA 1157
Score = 41.6 bits (96), Expect(3) = 5e-14
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 129
C F WRVAG ALC+ Y ++ VC SVLR++ N
Sbjct: 1166 CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 1202
Score = 31.6 bits (70), Expect(3) = 5e-14
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -1
Query: 496 SFEQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 368
S + VP+ C+ W+++++ Y+++M AL + G AE+
Sbjct: 1076 STKDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 1118
>ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Populus
euphratica] gi|743837972|ref|XP_011025606.1| PREDICTED:
probable RNA-dependent RNA polymerase 5 [Populus
euphratica]
Length = 1010
Score = 53.1 bits (126), Expect(3) = 6e-14
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = -2
Query: 393 KVNLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGV 247
K N ++KYKE+LY+A E N S R++++IF +A+A+Y + Y+ AK GV
Sbjct: 922 KANEVIKKYKELLYEAAEFNLSKRRDEEIFEEAVALYQVSYNHAKSQGV 970
Score = 39.3 bits (90), Expect(3) = 6e-14
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 263 QSIMG*KKCYFVWRVAGEALCE-YYLGMQDGRTFVCSESVLREIL 132
Q ++G C F WRVAG ALC Y L Q R +CS S L+ IL
Sbjct: 968 QGVVG--NCSFAWRVAGLALCTLYVLKNQGERPMICSPSALKAIL 1010
Score = 30.8 bits (68), Expect(3) = 6e-14
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRAL 410
LP F+ +V E + W+E + Y+ +MC AL
Sbjct: 883 LPCFDDEVQELYLVKWKELYGQYRKEMCIAL 913
>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Vitis vinifera]
Length = 954
Score = 48.1 bits (113), Expect(3) = 6e-14
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYD 268
+ KYK++LY A E +SPR +DIF +ALAIYH+ Y+
Sbjct: 871 INKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYE 907
Score = 41.6 bits (96), Expect(3) = 6e-14
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 129
C F WRVAG ALC+ Y ++ VC SVLR++ N
Sbjct: 918 CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 954
Score = 33.5 bits (75), Expect(3) = 6e-14
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 502 LPSFEQD-VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 368
LP F D VP+ C+ W+++++ Y+++M AL + G AE+
Sbjct: 825 LPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 870
>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Vitis vinifera] gi|297738765|emb|CBI28010.3| unnamed
protein product [Vitis vinifera]
Length = 929
Score = 48.1 bits (113), Expect(3) = 6e-14
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYD 268
+ KYK++LY A E +SPR +DIF +ALAIYH+ Y+
Sbjct: 846 INKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYE 882
Score = 41.6 bits (96), Expect(3) = 6e-14
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREILN 129
C F WRVAG ALC+ Y ++ VC SVLR++ N
Sbjct: 893 CNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 929
Score = 33.5 bits (75), Expect(3) = 6e-14
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 502 LPSFEQD-VPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSADAEI 368
LP F D VP+ C+ W+++++ Y+++M AL + G AE+
Sbjct: 800 LPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 845
>ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
gi|587870497|gb|EXB59780.1| putative RNA-dependent RNA
polymerase 3 [Morus notabilis]
Length = 521
Score = 50.1 bits (118), Expect(3) = 9e-14
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -2
Query: 375 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 262
+KYK +LY A EL +S +K ++I+ +ALAIYH+CYD A
Sbjct: 439 RKYKRLLYGAEELEESTKKMEEIYNEALAIYHVCYDYA 476
Score = 39.3 bits (90), Expect(3) = 9e-14
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRAL 410
LP FE +VPE C+ W+ + Y+ DMC AL
Sbjct: 393 LPHFEVEVPEACLTKWKAHYKDYRDDMCDAL 423
Score = 33.5 bits (75), Expect(3) = 9e-14
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYYLGMQDG-RTFVCSESVLREIL 132
C F W +AG AL + + + G R F C SVL+E+L
Sbjct: 485 CSFAWNIAGSALLKLHAFKKIGERAFFCLPSVLKEVL 521
>ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Jatropha curcas]
Length = 1008
Score = 54.3 bits (129), Expect(3) = 2e-13
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -2
Query: 375 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 262
+KYKE+LY+A E +S RKE DIF +ALAIY +CY+ A
Sbjct: 910 KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 947
Score = 37.7 bits (86), Expect(3) = 2e-13
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 380
LPSF V E C+ W+ HN Y+ +M AL N K ++A
Sbjct: 865 LPSFNDRVSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 905
Score = 29.6 bits (65), Expect(3) = 2e-13
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYY 192
C F W+VAG+ALC+ Y
Sbjct: 969 CGFAWKVAGQALCKLY 984
>ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Jatropha curcas]
Length = 1003
Score = 54.3 bits (129), Expect(3) = 2e-13
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -2
Query: 375 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 262
+KYKE+LY+A E +S RKE DIF +ALAIY +CY+ A
Sbjct: 905 KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 942
Score = 37.7 bits (86), Expect(3) = 2e-13
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 380
LPSF V E C+ W+ HN Y+ +M AL N K ++A
Sbjct: 860 LPSFNDRVSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 900
Score = 29.6 bits (65), Expect(3) = 2e-13
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYY 192
C F W+VAG+ALC+ Y
Sbjct: 964 CGFAWKVAGQALCKLY 979
>gb|KDP33811.1| hypothetical protein JCGZ_07382 [Jatropha curcas]
Length = 281
Score = 54.3 bits (129), Expect(3) = 2e-13
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -2
Query: 375 QKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEA 262
+KYKE+LY+A E +S RKE DIF +ALAIY +CY+ A
Sbjct: 183 KKYKEILYEAAEFEESKRKEDDIFEEALAIYEVCYNHA 220
Score = 37.7 bits (86), Expect(3) = 2e-13
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALNNVGAKGQSA 380
LPSF V E C+ W+ HN Y+ +M AL N K ++A
Sbjct: 138 LPSFNDRVSEPCLEKWKTLHNQYRQEMTIALKNKETKDKTA 178
Score = 29.6 bits (65), Expect(3) = 2e-13
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 239 CYFVWRVAGEALCEYY 192
C F W+VAG+ALC+ Y
Sbjct: 242 CGFAWKVAGQALCKLY 257
>ref|XP_011659949.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Cucumis sativus] gi|700211073|gb|KGN66169.1|
hypothetical protein Csa_1G574860 [Cucumis sativus]
Length = 1070
Score = 49.7 bits (117), Expect(3) = 1e-12
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVK 244
++KYKE+LY A EL SPR ++++ +ALAIY + YD A V+
Sbjct: 988 IKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVR 1032
Score = 37.4 bits (85), Expect(3) = 1e-12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREI 135
+ C F W+VAG AL + Y R+F C SV+REI
Sbjct: 1032 RNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1068
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALN-NVGAKGQSADAEI 368
LP FE+++PE+ W+ + Y+ DM A+ + AK +A+A I
Sbjct: 943 LPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATI 988
>ref|XP_011659950.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Cucumis sativus]
Length = 1066
Score = 49.7 bits (117), Expect(3) = 1e-12
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVK 244
++KYKE+LY A EL SPR ++++ +ALAIY + YD A V+
Sbjct: 984 IKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVR 1028
Score = 37.4 bits (85), Expect(3) = 1e-12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREI 135
+ C F W+VAG AL + Y R+F C SV+REI
Sbjct: 1028 RNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1064
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALN-NVGAKGQSADAEI 368
LP FE+++PE+ W+ + Y+ DM A+ + AK +A+A I
Sbjct: 939 LPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATI 984
>ref|XP_011659951.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Cucumis sativus]
Length = 1020
Score = 49.7 bits (117), Expect(3) = 1e-12
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -2
Query: 378 MQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGVK 244
++KYKE+LY A EL SPR ++++ +ALAIY + YD A V+
Sbjct: 938 IKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRSVR 982
Score = 37.4 bits (85), Expect(3) = 1e-12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 245 KKCYFVWRVAGEALCEYYLGMQDGRTFVCSESVLREI 135
+ C F W+VAG AL + Y R+F C SV+REI
Sbjct: 982 RNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1018
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRALN-NVGAKGQSADAEI 368
LP FE+++PE+ W+ + Y+ DM A+ + AK +A+A I
Sbjct: 893 LPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATI 938
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 52.8 bits (125), Expect(3) = 1e-12
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = -2
Query: 393 KVNLQMQKYKEVLYQAPELNQSPRKEKDIFMDALAIYHICYDEAKHYGV 247
K N ++KYKE LY+A E N S R++++IF +A+A+Y + Y+ AK GV
Sbjct: 811 KANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMALYQVSYNHAKSQGV 859
Score = 38.9 bits (89), Expect(3) = 1e-12
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 263 QSIMG*KKCYFVWRVAGEALCE-YYLGMQDGRTFVCSESVLREIL 132
Q ++G C F WRVAG ALC Y L Q R +CS S L+ IL
Sbjct: 857 QGVVG--NCSFAWRVAGLALCTLYVLKNQGERPMICSPSALKGIL 899
Score = 26.9 bits (58), Expect(3) = 1e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 502 LPSFEQDVPEHCIAFWREQHNPYKTDMCRAL 410
LP F+ +V E + W+E + Y+ +M AL
Sbjct: 772 LPCFDDEVHELYLVKWKELYGQYRKEMRNAL 802