BLASTX nr result
ID: Papaver29_contig00052768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00052768
(1181 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 306 2e-80
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 305 4e-80
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 300 2e-78
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 300 2e-78
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 298 6e-78
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 297 1e-77
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 295 4e-77
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 295 5e-77
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 294 1e-76
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 293 2e-76
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 292 3e-76
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 291 6e-76
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar... 291 1e-75
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 290 1e-75
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar... 290 2e-75
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 290 2e-75
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 290 2e-75
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 290 2e-75
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 289 3e-75
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 289 4e-75
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 306 bits (784), Expect = 2e-80
Identities = 160/366 (43%), Positives = 227/366 (62%), Gaps = 6/366 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDS---SQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQT 1010
G R GLY + S + S +A + +L HSRLGHP + V++V+S+ +LP S ++
Sbjct: 426 GRCRHGLYPIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISKNNLPCSVES 485
Query: 1009 IK--FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYS 836
+ C++C E +S +LP+ S ++ PL+L+ SDVWGP+ KYY+ FID +S
Sbjct: 486 VNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFS 544
Query: 835 RFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRF 656
+FTW++ + KS+VF F FQ VE +F RKI Q+D EY+KL ++GI H
Sbjct: 545 KFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHV 604
Query: 655 SCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSS 476
SCPHT +QNG ER+HRHI E GL++L+ AS+P +W ++F A YL+NRVPS ++ NS+
Sbjct: 605 SCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNST 664
Query: 475 PYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPT 296
P E LF PDY SLRVFGC C+PHLRPY +HK+ S CVF+G+S HKG+KCL + +
Sbjct: 665 PLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSS 724
Query: 295 GRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFVPSLVPINH-QPPVSNH 119
GR+YISR VVFDE S+++L S+L N+ + H PV+N
Sbjct: 725 GRVYISRDVVFDENIFPFSTLHSNAGARLRSEILLLPSSLTNYETTSTGGTHVVAPVANT 784
Query: 118 QLPASN 101
+P+ N
Sbjct: 785 PIPSDN 790
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 305 bits (782), Expect = 4e-80
Identities = 153/303 (50%), Positives = 204/303 (67%), Gaps = 1/303 (0%)
Frame = -2
Query: 1162 LYQLDDSSQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK-FCSSCH 986
LY L SS +AY + +L H RLGHP I TV++VV++FSLP S + + C++C
Sbjct: 431 LYPLPHSSLK-QAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQ 489
Query: 985 EHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFPMSQ 806
+ +SH+LPF S ++ +PL+L+ SDVWGP+ S KYY+ FID +S+FTW++ +
Sbjct: 490 QAKSHQLPFPISSSVSKHPLELVFSDVWGPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQH 548
Query: 805 KSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSEQNG 626
KS VF F FQ VE F RKI Q+D EY+ L ++GI H SCPHT +QNG
Sbjct: 549 KSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNG 608
Query: 625 LVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEALFGISP 446
ER+HRHI E GL++L+ AS+P +W ++F A YL+NRVPS +HN SP E LF P
Sbjct: 609 SAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKP 668
Query: 445 DYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIYISRHVV 266
DY+SLR+FGC C+P+LRPY +HK+ S CVF+G+S HKG+KCL + TGRIYISR VV
Sbjct: 669 DYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVV 728
Query: 265 FDE 257
FDE
Sbjct: 729 FDE 731
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 300 bits (768), Expect = 2e-78
Identities = 157/366 (42%), Positives = 224/366 (61%), Gaps = 6/366 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDS---SQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQT 1010
G R GLY + S S + +A + +L HSRLGHP + V++V+S+ +LP S ++
Sbjct: 429 GKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVES 488
Query: 1009 IK--FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYS 836
+ C++C E +SH+LP+ S ++ PL+L+ SDVWGP+ KYY+ FID +S
Sbjct: 489 VNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFS 547
Query: 835 RFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRF 656
+FTW++ + KS+VF F FQ VE +F RKI Q+D EY+KL ++GI H
Sbjct: 548 KFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHV 607
Query: 655 SCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSS 476
SCPHT +QNG ER+H+HI E GL++L+ AS+P +W ++F A YL+NR+PS ++ NS+
Sbjct: 608 SCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNST 667
Query: 475 PYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPT 296
P E LF PDY+SLRVF C C+PHL PY +HK+ S CVF+G+S HKG+K L + +
Sbjct: 668 PLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSS 727
Query: 295 GRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFVPSLVPINH-QPPVSNH 119
GR+YISR VVFDE S+++L S L N+ H PV+N
Sbjct: 728 GRVYISRDVVFDENVFPFSTLHSNAGARLRSEILLLPSPLTNYNTVSAGGTHIVAPVANT 787
Query: 118 QLPASN 101
LP+ N
Sbjct: 788 PLPSDN 793
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 300 bits (768), Expect = 2e-78
Identities = 157/366 (42%), Positives = 224/366 (61%), Gaps = 6/366 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDS---SQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQT 1010
G R GLY + S S + +A + +L HSRLGHP + V++V+S+ +LP S ++
Sbjct: 429 GKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVES 488
Query: 1009 IK--FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYS 836
+ C++C E +SH+LP+ S ++ PL+L+ SDVWGP+ KYY+ FID +S
Sbjct: 489 VNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRN-KYYVSFIDDFS 547
Query: 835 RFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRF 656
+FTW++ + KS+VF F FQ VE +F RKI Q+D EY+KL ++GI H
Sbjct: 548 KFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHV 607
Query: 655 SCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSS 476
SCPHT +QNG ER+H+HI E GL++L+ AS+P +W ++F A YL+NR+PS ++ NS+
Sbjct: 608 SCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNST 667
Query: 475 PYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPT 296
P E LF PDY+SLRVF C C+PHL PY +HK+ S CVF+G+S HKG+K L + +
Sbjct: 668 PLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSS 727
Query: 295 GRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFVPSLVPINH-QPPVSNH 119
GR+YISR VVFDE S+++L S L N+ H PV+N
Sbjct: 728 GRVYISRDVVFDENVFPFSTLHSNAGARLRSEILLLPSPLTNYNTVSAGGTHIVAPVANT 787
Query: 118 QLPASN 101
LP+ N
Sbjct: 788 PLPSDN 793
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 298 bits (763), Expect = 6e-78
Identities = 149/314 (47%), Positives = 207/314 (65%), Gaps = 6/314 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSKAYIG*R---ANLQD*HSRLGHPMIRTVRKVVSQFSLPVS-SQ 1013
G +R GLY L++ Q A R A + H RLGH + ++ + + ++ ++ S+
Sbjct: 426 GPRRNGLYVLEN--QEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQINKSR 483
Query: 1012 TIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSR 833
T C C +S +LPF S + L+PLD I D+WGPS ++SN+G KYY IF+D YSR
Sbjct: 484 TSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSR 543
Query: 832 FTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEY--RKLTPHLQELGIFHR 659
++W +P+ KS+ S+F FQK VEN KIK+FQSD E+ KL HL E GI HR
Sbjct: 544 YSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHR 603
Query: 658 FSCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNS 479
SCP+T +QNGL ER+HRH+ E GL++L + P +W +SF+TA Y++NR+PS+ + N
Sbjct: 604 ISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNL 663
Query: 478 SPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLP 299
SPYEALFG PDY+SLRVFG CYP LRP +K D S CVF+GY+ +KGY+C + P
Sbjct: 664 SPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPP 723
Query: 298 TGRIYISRHVVFDE 257
TG++YISR+V+F+E
Sbjct: 724 TGKVYISRNVIFNE 737
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 297 bits (760), Expect = 1e-77
Identities = 152/312 (48%), Positives = 198/312 (63%), Gaps = 4/312 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSS--QSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQ-- 1013
G R GLY L + + R L+ H RLGHP V +V+S +LP S
Sbjct: 427 GKCRDGLYPLPPHPDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNS 486
Query: 1012 TIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSR 833
T C +C + ++H+LP+ S + PL LI SDV+GP+ I S YKYY+ FID YS+
Sbjct: 487 TTSVCDACLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPA-IDSFGRYKYYVSFIDDYSK 545
Query: 832 FTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFS 653
FTW++ + KSDV+ F FQ VE +FGRKI FQSD EY KL H + +GI H+ S
Sbjct: 546 FTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVS 605
Query: 652 CPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSP 473
CPHT +QNG ER+HRHI E GL +L +S+P YW +F A YL+NR PS ++ + +P
Sbjct: 606 CPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTP 665
Query: 472 YEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTG 293
L G +PDY+SLR+FGC C+P+LRPY HK+ S+ CVF+GYS HKG+KCL + TG
Sbjct: 666 LHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTG 725
Query: 292 RIYISRHVVFDE 257
RIYISR VVFDE
Sbjct: 726 RIYISRDVVFDE 737
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 295 bits (756), Expect = 4e-77
Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 5/313 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSS-QSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK 1004
G R GLY L++ Q + A+ + H RLGH + ++ S S+ + ++ +K
Sbjct: 430 GRNRDGLYSLEEPKLQVLYSTRQNSASSEVWHRRLGHANAEVLHQLASSKSIIIINKVVK 489
Query: 1003 -FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFT 827
C +CH +S +LPF S PL+ I D+WGPS S +G++YY++FID YSRFT
Sbjct: 490 TVCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFT 549
Query: 826 WMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEY--RKLTPHLQELGIFHRFS 653
W +P+ KSD FS F +FQK VEN G KIKIFQ D E+ + HLQ+ GI S
Sbjct: 550 WFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFLKHLQDHGIQQNMS 609
Query: 652 CPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSV-HNSS 476
CP+T +QNG+ ER+HRHI E GL+++ + +P YW +SF+TA +++N +P++S+ +N S
Sbjct: 610 CPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLKYWLESFFTANFVINLLPTSSLDNNES 669
Query: 475 PYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPT 296
PY+ L+G +P+Y++LRVFGC CYP LR Y S K D S CVF+GY+ +KGY+CL+ PT
Sbjct: 670 PYQKLYGKAPEYSALRVFGCACYPTLRDYASTKFDPRSLKCVFLGYNEKYKGYRCLYPPT 729
Query: 295 GRIYISRHVVFDE 257
GRIYISRHVVFDE
Sbjct: 730 GRIYISRHVVFDE 742
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 295 bits (755), Expect = 5e-77
Identities = 149/316 (47%), Positives = 202/316 (63%), Gaps = 8/316 (2%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSK------AYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVS 1019
G RG LY L SS + A+ + + + HSRLGHP V KV+S+ +LP
Sbjct: 423 GPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVEKVISKNNLPCL 482
Query: 1018 SQTIK--FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFID 845
+++ K C +C + +SH+LP++ S ++ +PL+LI SDVWGP+ + S G +YY+ FI
Sbjct: 483 AESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPA-LTSVGGKQYYVSFIG 541
Query: 844 AYSRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIF 665
YS+FTW++ + KS+V F FQ VE LF RKI QSD EY KL ++GI
Sbjct: 542 DYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGIT 601
Query: 664 HRFSCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVH 485
H SCPHT +QNG ER+HRHI E GLT+L +S+P +W ++F A YL+NR P+ +
Sbjct: 602 HHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQ 661
Query: 484 NSSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLH 305
+P E LF +PDY+SLRVFGC C+PHLRPY +HK+ S C F+GYS HKG+KCL
Sbjct: 662 FLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLD 721
Query: 304 LPTGRIYISRHVVFDE 257
TGR+YISR V+FDE
Sbjct: 722 PSTGRVYISRDVIFDE 737
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 294 bits (752), Expect = 1e-76
Identities = 145/319 (45%), Positives = 193/319 (60%), Gaps = 11/319 (3%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSKAYIG*R-------ANLQD*----HSRLGHPMIRTVRKVVSQF 1034
G GLY+ S AY+G +N+++ H RLGH V +++
Sbjct: 446 GKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAATDIVTRIMHNC 505
Query: 1033 SLPVSSQTIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYII 854
++ CSSC +SH+LP + S PL+L+ +D+WGP+ + S G KY+I+
Sbjct: 506 NVSCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFIL 565
Query: 853 FIDAYSRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQEL 674
F+D YSR+TW++ + K IF F+ VEN F KIK Q DN E+R LQE
Sbjct: 566 FVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQES 625
Query: 673 GIFHRFSCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPST 494
GI HRFSCP+ S QNG VER+HRH+ ETGL +L A +P +W +F TA +L+NR+PS
Sbjct: 626 GILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSK 685
Query: 493 SVHNSSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYK 314
+ N+SPY ALF +PDY LRVFGCLCYP +RPY +HK+ S CVF+GYS HKGY
Sbjct: 686 VLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYL 745
Query: 313 CLHLPTGRIYISRHVVFDE 257
CL TGR+Y+S HVVFDE
Sbjct: 746 CLDNLTGRVYVSPHVVFDE 764
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 293 bits (750), Expect = 2e-76
Identities = 151/306 (49%), Positives = 199/306 (65%), Gaps = 3/306 (0%)
Frame = -2
Query: 1165 GLYQLDDSSQSSKAYIG*-RANLQD*HSRLGHPMIRTVRKVVSQFSLPV--SSQTIKFCS 995
GLY L S+ SSK +G + + HSRLGHP + V+KVVS +LP S+ + C
Sbjct: 424 GLYPLPASTSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCD 483
Query: 994 SCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFP 815
+C + +SH+LPF S + PL+L+ SDVWGP+ S G KYY+ FID +S+FTW++
Sbjct: 484 ACQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYL 542
Query: 814 MSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSE 635
+ QKS+VF F FQ+ VE +F RKI Q+D EY KL ++GI H SCPHT +
Sbjct: 543 LKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQ 602
Query: 634 QNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEALFG 455
QNG ER+HRHI E GL++L AS+P +W ++F A YL+NR PS + +P E LF
Sbjct: 603 QNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLFH 662
Query: 454 ISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIYISR 275
P YTSLRVFGC C+P+LRPY + K+ S CVF+GYS HKG+KCL + GR+YISR
Sbjct: 663 QKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISR 722
Query: 274 HVVFDE 257
VVFDE
Sbjct: 723 DVVFDE 728
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 292 bits (748), Expect = 3e-76
Identities = 164/381 (43%), Positives = 219/381 (57%), Gaps = 13/381 (3%)
Frame = -2
Query: 1111 RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIKF--CSSCHEHRSHKLPFNPSKAIY 938
+ L HSRLGHP ++ +VSQFSLPVS+ + K CS C ++SHKLPF + I
Sbjct: 554 KTTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIIS 613
Query: 937 LNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFPMSQKSDVFSIFFLFQKHVE 758
PL+ + SDVW S + S + +KYY+I +D Y+R+TW++P+ QKS V F F+ VE
Sbjct: 614 YTPLEYVYSDVW-TSPVTSVDNFKYYLILVDHYTRYTWLYPLKQKSQVRETFVAFKALVE 672
Query: 757 NLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSEQNGLVERRHRHIRETGLTI 578
N F KI+ SDN E+ L L GI H S PHT E NG+ ER+HRHI ETGLT+
Sbjct: 673 NRFQTKIRTLYSDNGGEFIALRQFLLTHGISHLTSLPHTPEHNGIAERKHRHILETGLTL 732
Query: 577 LNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEALFGISPDYTSLRVFGCLCYPHL 398
L AS+P SYW +F TA YL+NR+PS+ ++N SPY LF SP+Y LRVFGC C+P L
Sbjct: 733 LTQASIPTSYWTYAFGTAVYLINRLPSSVLNNESPYSKLFKTSPNYLKLRVFGCSCFPWL 792
Query: 397 RPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIYISRHVVFDEXXXXXXXXXXXXX 218
RPY +HK++ S PCVF+GYS + Y CL +GR+Y SRHV F E
Sbjct: 793 RPYTNHKLERRSQPCVFLGYSLTQSAYLCLDRSSGRVYTSRHVQFVEDQ----------- 841
Query: 217 XXXXSQVILPFS-----ALHNFVP-SLVPINHQPPVSNHQLPASNHQPP---ASNHQPP- 68
PFS ++ N P P HQPP ++P + PP A + PP
Sbjct: 842 --------FPFSISDTHSVSNSSPEEASPSCHQPP---SRIPIQSSSPPLVQAPSSLPPL 890
Query: 67 -KFNHQPPVSNHQPPTSISNH 8
+H+ P + +S +N+
Sbjct: 891 SSDSHRRPNAETSSSSSSTNN 911
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 291 bits (746), Expect = 6e-76
Identities = 146/310 (47%), Positives = 201/310 (64%), Gaps = 2/310 (0%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK- 1004
G +R GLY L +S + +A+ +L+ HSRLGHP I V KV+S LP ++ K
Sbjct: 323 GPRRHGLYPLPSTSSTKQAFAV-APSLERWHSRLGHPSIPIVMKVISSNKLPCLRESNKE 381
Query: 1003 -FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFT 827
C +C + +SH+LP++ S ++ PL+LI SDVWGP+ S G K+Y+ FID+Y +F+
Sbjct: 382 SVCDACQKAKSHQLPYSNSMSVSNKPLELIYSDVWGPAST-SFGGKKFYVSFIDSYRKFS 440
Query: 826 WMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCP 647
W++ + KSDVF F FQ+ VE LF RKI Q+D EY+KL +++GI H SCP
Sbjct: 441 WIYFLKHKSDVFEKFHDFQQLVERLFDRKIIAMQTDWGGEYQKLNSFFEKIGISHHVSCP 500
Query: 646 HTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYE 467
HT +QNG ER+HR I E GL +L AS+P YW ++F A +++NR+PS + +P E
Sbjct: 501 HTHQQNGSAERKHRLIVEVGLALLAYASMPLKYWDEAFLAATHIINRIPSRILQYDTPLE 560
Query: 466 ALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRI 287
LF DY+S R+FGC C+P+LRPY +HK+ S CVF+G S +H GYKCL + TGRI
Sbjct: 561 CLFNHKLDYSSFRIFGCACWPNLRPYNAHKLQFRSMQCVFLGPSHTHNGYKCLDIATGRI 620
Query: 286 YISRHVVFDE 257
YI R VVFDE
Sbjct: 621 YICRDVVFDE 630
>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
Length = 2090
Score = 291 bits (744), Expect = 1e-75
Identities = 163/388 (42%), Positives = 215/388 (55%), Gaps = 6/388 (1%)
Frame = -2
Query: 1162 LYQLDDSSQSSKAYIG*RAN---LQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK--FC 998
LY+ SS S A+ ++ LQ HSRLGHP +VS+FS+P+S Q+ + C
Sbjct: 456 LYEWPISSSSPTAFAASPSSTTTLQSWHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLSC 515
Query: 997 SSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMF 818
S C +++HK+PF+ S PL+ I SDVW S ILS E +KYY+IF+D Y+R+TW++
Sbjct: 516 SDCFINKTHKIPFSKSTITSSKPLEYIYSDVWS-SPILSLENFKYYLIFVDHYTRYTWLY 574
Query: 817 PMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTS 638
P+ KS V F F+ VEN F +I SDN EY L L GI H S PHT
Sbjct: 575 PLKLKSQVKDTFIAFKSLVENRFQTRIGTLYSDNGGEYIALRGFLSTHGISHFTSPPHTP 634
Query: 637 EQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEALF 458
E NGL ER+HRHI E GLT+L+ ASVP YW +F TA L+NR+P+ +H SP++ LF
Sbjct: 635 EHNGLSERKHRHIVEMGLTLLSTASVPKKYWSFAFATAVDLINRLPTPLLHMQSPFQKLF 694
Query: 457 GISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIYIS 278
G P+Y LRVFG CYP LRPY HK++ ++ C F+GYSP+ Y CLH+P GR+Y+S
Sbjct: 695 GTDPNYDKLRVFGSACYPWLRPYNRHKLEDKAAQCAFMGYSPTQSAYYCLHIPIGRMYVS 754
Query: 277 RHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFVPSLVPINHQPPVSNH-QLPASN 101
RHV FDE PF+ L P + + + +H L S
Sbjct: 755 RHVQFDEG-------------------TFPFANLKLKAPPTITFDEERNWDSHTTLVPST 795
Query: 100 HQPPASNHQPPKFNHQPPVSNHQPPTSI 17
P H P PP S PT +
Sbjct: 796 VVPSLGPHPAP-----PPTSVPSSPTQV 818
Score = 285 bits (730), Expect = 4e-74
Identities = 163/394 (41%), Positives = 216/394 (54%), Gaps = 7/394 (1%)
Frame = -2
Query: 1162 LYQLDDSSQSSKAYIG*RAN---LQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK--FC 998
LY+ SS S A+ ++ LQ HSRLGHP +VS+FS+P+S Q+ + C
Sbjct: 1516 LYEWPISSSSPTAFAASPSSTTTLQSWHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLSC 1575
Query: 997 SSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMF 818
S C +++HK+PF+ S PL+ I SDVW SHI YY+IF+D Y+R+TW++
Sbjct: 1576 SDCFINKTHKIPFSKSTITSSKPLEYIYSDVWS-SHI-------YYLIFVDHYTRYTWLY 1627
Query: 817 PMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTS 638
P+ KS V F F+ VEN F +I SDN EY L L I H S PHT
Sbjct: 1628 PLKLKSQVKDTFIAFKSLVENRFQTRIGTLYSDNGGEYIALRGFLSTHSISHFTSPPHTP 1687
Query: 637 EQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEALF 458
E NGL ER+HRHI E GLT+L+ ASVP YW +F TA YL+NR+P+ +H SP++ LF
Sbjct: 1688 EHNGLSERKHRHIVEMGLTLLSTASVPKKYWSFAFATAVYLINRLPTPVLHMQSPFQKLF 1747
Query: 457 GISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIYIS 278
G P+Y LRVFG CYP LRPY HK++ ++ C F+GYSP+ Y CLH+PTGR+Y+S
Sbjct: 1748 GTDPNYDKLRVFGSACYPWLRPYNRHKLEDKAAQCAFMGYSPTQSAYYCLHIPTGRMYVS 1807
Query: 277 RHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFVPSLVPINHQPPVSNH-QLPASN 101
RHV FDE PF+ L P + + + +H L S
Sbjct: 1808 RHVQFDEG-------------------TFPFANLKLKAPPTITFDEERNWDSHTTLVPST 1848
Query: 100 HQPPASNHQPPKFNHQPPVSNHQPPTSI-SNHQP 2
P H P PP S PT + S++ P
Sbjct: 1849 VVPSLGPHPAP-----PPTSVPSSPTQVLSSYSP 1877
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 290 bits (743), Expect = 1e-75
Identities = 138/279 (49%), Positives = 185/279 (66%), Gaps = 1/279 (0%)
Frame = -2
Query: 1090 HSRLGHPMIRTVRKVVSQFSLPVSSQTI-KFCSSCHEHRSHKLPFNPSKAIYLNPLDLIV 914
HSRLGHP + +V LPV S+ + + CS+C +SH+LP + S +Y P +L+V
Sbjct: 570 HSRLGHPHHHALTEVFKLCHLPVPSKPLAELCSACCLGKSHRLPTSLSATVYSQPFELVV 629
Query: 913 SDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIK 734
D+WGP+ + S GY Y++ +DA+SRF W+FP+ KSD F F+K VE F IK
Sbjct: 630 CDLWGPAPMQSLGGYNYFLTCVDAFSRFVWVFPLRLKSDTLPQFIQFKKMVELQFNYPIK 689
Query: 733 IFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSEQNGLVERRHRHIRETGLTILNMASVPF 554
QS+ E+R T +L +LGI HRF+CPHT QNG+VER+HR+ ETGL +L +++P
Sbjct: 690 SVQSNGGGEFRPFTKYLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTLPL 749
Query: 553 SYWYDSFYTACYLMNRVPSTSVHNSSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKM 374
+W SF TA YL+NR+PS S++N S Y L PDY+ LRVFGC C+P LRPY SHK+
Sbjct: 750 KFWDHSFVTAAYLINRLPSVSLNNQSLYFKLLNKQPDYSCLRVFGCSCFPFLRPYNSHKL 809
Query: 373 DALSSPCVFIGYSPSHKGYKCLHLPTGRIYISRHVVFDE 257
D S C+F+GYS +HKGYKCL P G IYIS+ V+F E
Sbjct: 810 DYRSQECIFLGYSTAHKGYKCL-APNGHIYISKDVLFQE 847
>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
Length = 1203
Score = 290 bits (741), Expect = 2e-75
Identities = 156/373 (41%), Positives = 213/373 (57%), Gaps = 9/373 (2%)
Frame = -2
Query: 1096 D*HSRLGHPMIRTVRKVVSQFSLPVSSQTIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLI 917
D H RLGHP + +VS+FSLP S CS C +++HKLPF+ + + PL+ +
Sbjct: 472 DWHHRLGHPSTTILHNIVSKFSLPCSRSVNNVCSDCAINKTHKLPFSQTSIVSTYPLEYV 531
Query: 916 VSDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKI 737
+D+W S +LS + YKYY++ +D YSR+TWM+P+ KS V F F+ VEN F KI
Sbjct: 532 FTDLWS-SPVLSIDNYKYYLVLVDHYSRYTWMYPLKLKSQVKETFIAFKALVENRFNTKI 590
Query: 736 KIFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSEQNGLVERRHRHIRETGLTILNMASVP 557
K SDN E+ L L GI H S PHT E NG+ ER+HRHI ETGLT+L A +P
Sbjct: 591 KTLYSDNGGEFMALKAFLSSSGISHLTSPPHTPEHNGISERKHRHIVETGLTLLTHAKMP 650
Query: 556 FSYWYDSFYTACYLMNRVPSTSVHNSSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHK 377
+YW +F TA YL+NR+P+ + SP + LFG P+Y+ LRVFGCLC+P LRPY ++K
Sbjct: 651 KTYWSYAFTTATYLINRMPTPVLDMESPVQKLFGSQPNYSKLRVFGCLCFPWLRPYNTNK 710
Query: 376 MDALSSPCVFIGYSPSHKGYKCLHLPTGRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQV 197
+ S+PC+FIGYS + Y CL +GR+YI+RHV FDE +
Sbjct: 711 LQDRSTPCIFIGYSQTQSAYLCLQPSSGRVYITRHVKFDESSFPFNKLITPKTIPAQTNA 770
Query: 196 IL-PFSALHNFVPSLVPINH--QPPV--SNHQLPASN--HQP--PASNHQPPKFNHQPPV 44
P + +P L P H QPP+ + +P S+ HQP P S P + P
Sbjct: 771 TTQPLQPIITTIP-LTPPRHLTQPPLVRTTQLVPTSSDLHQPASPPSTTSPVLPSSPAPP 829
Query: 43 SNHQPPTSISNHQ 5
S PP+ ++ Q
Sbjct: 830 SPAIPPSQTTSPQ 842
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 290 bits (741), Expect = 2e-75
Identities = 156/401 (38%), Positives = 229/401 (57%), Gaps = 12/401 (2%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSS----QSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVS-S 1016
G + GLY L++S S++ A+++ H RLGH + +++++++ + V+ S
Sbjct: 428 GPRNNGLYMLENSEFVALYSNRQCA---ASMETWHHRLGHSNSKILQQLLTRKEIQVNKS 484
Query: 1015 QTIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYS 836
+T C C +S +L F S L PLD + D+WGPS ++SN+G+KYY +F+D +S
Sbjct: 485 RTSPVCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFS 544
Query: 835 RFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEY--RKLTPHLQELGIFH 662
RF+W FP+ KS S+F +QK VEN G KIK FQSD E+ KL H +E GI H
Sbjct: 545 RFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHH 604
Query: 661 RFSCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHN 482
R SCP+T +QNG+ ER+HRH+ E GL++L + P +W ++F+TA YL N +PS+ +
Sbjct: 605 RISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSNLLPSSVLKE 664
Query: 481 SSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHL 302
SPYE LF DYT LRVFG CYP LRP +K D S CVF+GY +KGY+CL+
Sbjct: 665 ISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQYKGYRCLYP 724
Query: 301 PTGRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQVILPF-SALHNFVP----SLVPINHQ 137
PTG++YISRHV+FDE PF H+ VP +L+
Sbjct: 725 PTGKVYISRHVIFDEAQ-------------------FPFKEKYHSLVPKYQTTLLQAWQH 765
Query: 136 PPVSNHQLPASNHQPPASNHQPPKFNHQPPVSNHQPPTSIS 14
++ +P+S QP A P + P+ N++ +++
Sbjct: 766 TDLTPPSVPSSQLQPLARQMTPMATSENQPMMNYETEEAVN 806
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 290 bits (741), Expect = 2e-75
Identities = 140/279 (50%), Positives = 184/279 (65%), Gaps = 1/279 (0%)
Frame = -2
Query: 1090 HSRLGHPMIRTVRKVVSQFSLP-VSSQTIKFCSSCHEHRSHKLPFNPSKAIYLNPLDLIV 914
H+RLGHP V V+++ +LP ++ CS C + HK F S + Y PL+LI
Sbjct: 508 HNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIH 567
Query: 913 SDVWGPSHILSNEGYKYYIIFIDAYSRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIK 734
+D+WGP+ S+ G++YYI FIDAYSRFTW++ + KS+ F +F F+ VE G KIK
Sbjct: 568 TDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIK 627
Query: 733 IFQSDNPAEYRKLTPHLQELGIFHRFSCPHTSEQNGLVERRHRHIRETGLTILNMASVPF 554
QSD EYR T +L GI HR SCP+T EQNGL ER+HRHI E G+ +L AS+PF
Sbjct: 628 AVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPF 687
Query: 553 SYWYDSFYTACYLMNRVPSTSVHNSSPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKM 374
YW ++F T+ YL+NR+P+ + N SP E LF P Y+ L+VFGC+CYP+LRP+ HK+
Sbjct: 688 KYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKL 747
Query: 373 DALSSPCVFIGYSPSHKGYKCLHLPTGRIYISRHVVFDE 257
S PC F+GYS +HKGYKCL P G I ISR V+FDE
Sbjct: 748 QFRSIPCTFLGYSLNHKGYKCLS-PNGNILISRDVIFDE 785
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 290 bits (741), Expect = 2e-75
Identities = 158/392 (40%), Positives = 228/392 (58%), Gaps = 7/392 (1%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSK-----AYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSS 1016
G+ G+Y +S + AY+ R ++ H RLGHP I+ V+ +V+ FSLP+++
Sbjct: 381 GACENGVYIFPNSMMAPSTPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVNLFSLPLTT 440
Query: 1015 QTIKF-CSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAY 839
+ C SC +++H+ PF + +PL++I SDVWGP+H+ G +YY+IF+D Y
Sbjct: 441 NKLPLSCPSCSINKAHQQPFGSTSFQSHSPLEIIYSDVWGPAHVTGLNGERYYLIFVDHY 500
Query: 838 SRFTWMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHR 659
+++ W +PMS KS V ++F F+ VE F IK S+N E+ L +L + GI H
Sbjct: 501 TKYIWFYPMSTKSLVSTVFPQFKLLVETRFKCSIKSLYSNNGGEFLSLKKYLSDHGISHY 560
Query: 658 FSCPHTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNS 479
+ PHT +QNG+ ERRHRH+ ETGLT+L+ AS+ SYW +F TA YL+NR P+ + +
Sbjct: 561 TTAPHTPQQNGVSERRHRHLVETGLTLLHDASLSLSYWPHAFQTATYLINRQPTXLLKHK 620
Query: 478 SPYEALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLP 299
SP+E LFG P+Y LR FGCLCYP RPY +HK+ S PC+F+GYS + YKC+
Sbjct: 621 SPFEVLFGQRPNYLKLRKFGCLCYPLTRPYNTHKLQPKSIPCIFLGYSQTQNAYKCMDPL 680
Query: 298 TGRIYISRHVVFDEXXXXXXXXXXXXXXXXXSQVILPFSALHNFV-PSLVPINHQPPVSN 122
T R+YISRHV FDE ++ L SA H F+ + P PP S
Sbjct: 681 TNRLYISRHVTFDE---LXSPFLSKTKHGPSAETHLFSSAPHLFLQQNPCPXFLSPPPS- 736
Query: 121 HQLPASNHQPPASNHQPPKFNHQPPVSNHQPP 26
+PA +P S+ PP + +P + PP
Sbjct: 737 --IPAPPSRPDRSSXPPP--SSEPXAAIPAPP 764
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 289 bits (740), Expect = 3e-75
Identities = 147/309 (47%), Positives = 193/309 (62%), Gaps = 6/309 (1%)
Frame = -2
Query: 1165 GLYQLDDSS----QSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVS--SQTIK 1004
GLY L S Q + Y + + + HSRLGHP V KV+ +LP S+ +
Sbjct: 428 GLYALPSPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVS 487
Query: 1003 FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFTW 824
C +C + +SH+L F S + PL+L+ SDVWGP+ S KYY+ FID YS+FTW
Sbjct: 488 VCDACQKAKSHQLSFPKSTSESKYPLELVFSDVWGPAP-QSVGNNKYYVSFIDDYSKFTW 546
Query: 823 MFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCPH 644
++ + KS+VF F FQ VE LF RKI Q+D EY+KL ++GI H SCPH
Sbjct: 547 IYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPH 606
Query: 643 TSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYEA 464
T +QNG ER+HRHI E GL +L +S+P +W ++F +A YL+NR PS +H+ SP E
Sbjct: 607 THQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLER 666
Query: 463 LFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRIY 284
L G PDY +LRVFGC C+P+LRPY HK+ S+ C F+GYS HKG+KCL TGR+Y
Sbjct: 667 LLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVY 726
Query: 283 ISRHVVFDE 257
ISR VVFDE
Sbjct: 727 ISRDVVFDE 735
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 289 bits (739), Expect = 4e-75
Identities = 147/310 (47%), Positives = 195/310 (62%), Gaps = 2/310 (0%)
Frame = -2
Query: 1180 GSKRGGLYQLDDSSQSSKAYIG*RANLQD*HSRLGHPMIRTVRKVVSQFSLPVSSQTIK- 1004
G R GLY L S +A++ + H RLGHP V +++SQ LP S ++
Sbjct: 417 GPCRRGLYPLPARSSLRQAFVA-TPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNE 475
Query: 1003 -FCSSCHEHRSHKLPFNPSKAIYLNPLDLIVSDVWGPSHILSNEGYKYYIIFIDAYSRFT 827
C +C + + H+LPF S ++ NPL+LI SDVWGP+ S KYY+ FID YS+F
Sbjct: 476 SVCDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFV 534
Query: 826 WMFPMSQKSDVFSIFFLFQKHVENLFGRKIKIFQSDNPAEYRKLTPHLQELGIFHRFSCP 647
W++ + KS+VF F FQK VE F RKI Q+D EY KL E+GI H SCP
Sbjct: 535 WIYFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCP 594
Query: 646 HTSEQNGLVERRHRHIRETGLTILNMASVPFSYWYDSFYTACYLMNRVPSTSVHNSSPYE 467
HT +QNG VER+HRHI E GL++L AS+P +W ++F A YL+NR+PS + +P E
Sbjct: 595 HTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLE 654
Query: 466 ALFGISPDYTSLRVFGCLCYPHLRPYRSHKMDALSSPCVFIGYSPSHKGYKCLHLPTGRI 287
LF +PDY SLR FGC C+P+LRPY +HK+ S CVF+G+S HKG+KCL + TGR+
Sbjct: 655 RLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRV 714
Query: 286 YISRHVVFDE 257
Y+SR V FDE
Sbjct: 715 YVSRDVTFDE 724