BLASTX nr result

ID: Papaver29_contig00052467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00052467
         (418 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011460857.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   1e-06
ref|XP_013441431.1| F-box protein interaction domain protein [Me...    49   3e-06
ref|XP_013467745.1| F-box protein interaction domain protein [Me...    55   4e-06
ref|XP_013441569.1| F-box protein interaction domain protein [Me...    49   8e-06
ref|XP_011460760.1| PREDICTED: F-box/kelch-repeat protein At3g23...    50   1e-05

>ref|XP_011460857.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca] gi|764558076|ref|XP_011460858.1|
           PREDICTED: F-box/kelch-repeat protein At3g06240-like
           [Fragaria vesca subsp. vesca]
          Length = 343

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 51/88 (57%)
 Frame = -1

Query: 292 LMFIRLVKISWKSTQIIPHWMYPVEEPGVLLNGVFHWLGYMTDNYSDVIISLDISVEKFK 113
           ++   L   SWK+ Q  P+  + ++ PG  LNG  HWL  M  ++  VI +LD++ +KF 
Sbjct: 166 VLIFSLKNNSWKTVQDFPY-KHLLKNPGTTLNGAVHWL-CMGPDHLPVIAALDLAGQKFS 223

Query: 112 ALQPPKVSLEKRQWGLSAGVLKDCLSVL 29
            L PP+  ++    G + GVL+DCL +L
Sbjct: 224 GLSPPESVIDSN--GYTTGVLRDCLCLL 249


>ref|XP_013441431.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|657368474|gb|KEH15456.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 362

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 SWKSTQIIPHWMYPVEEPGVLLNGVFHWLGYMTDNYSDVIISLDISVEKFKALQPPKVSL 86
           SW      P+   P+   G+ +NG  +WL       S VI+SLD++ E ++ L PP  ++
Sbjct: 191 SWIKIHDFPYTS-PLCGSGIFVNGNVNWLALDGVTSSCVIVSLDLTKESYQKLLPP--NM 247

Query: 85  EKRQWGLSAGVLKDCLSVLCSG-VNVEVW 2
           E   W  + GVLKDCL +  S  V + VW
Sbjct: 248 EMDHW-TTLGVLKDCLCIFASNDVFLNVW 275



 Score = 28.5 bits (62), Expect(2) = 3e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 386 DRIRSPYAFGYDYSAGYYKVICLXXXXXXXXXXVYTIG 273
           D+  S Y+FGYD+    YK++ L          V+T+G
Sbjct: 151 DKHLSAYSFGYDHLINNYKIVALSLCKDKTEVSVHTLG 188


>ref|XP_013467745.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|657402913|gb|KEH41782.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 376

 Score = 55.5 bits (132), Expect(2) = 4e-06
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
 Frame = -1

Query: 265 SWKSTQIIPHWMYPVEEPGVLLNGVFHWLGYMT----DNYSDVIISLDISVEKFKALQPP 98
           SW+  +  P  ++P   PG+++NG  +W  Y       N+S VI+SLD+  E ++ +Q P
Sbjct: 205 SWRRIKDFPA-LFPHYRPGIIVNGTVNWFAYSNVVSRGNFSSVIVSLDLEKECYQEIQQP 263

Query: 97  KVSLEKRQWGLSAGVLKDCLSVLCSGVN-VEVW 2
              +  +   L+ G+++DCL V  +  + ++VW
Sbjct: 264 NYGIIDK---LTLGMMRDCLCVFANSYSFIDVW 293



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 368 YAFGYDYSAGYYKVI 324
           YAFGYD     YKV+
Sbjct: 160 YAFGYDPFIHNYKVV 174


>ref|XP_013441569.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|657368856|gb|KEH15594.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 392

 Score = 49.3 bits (116), Expect(2) = 8e-06
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 SWKSTQIIPHWMYPVEEPGVLLNGVFHWLGYMTDNYSDVIISLDISVEKFKALQPPKVSL 86
           SW      P+   P+   G+ +NG  +WL       S VI+SLD++ E ++ L PP  ++
Sbjct: 221 SWIKIHDFPYTS-PLCGSGIFVNGNVNWLALDGVTSSCVIVSLDLTKESYQKLLPP--NM 277

Query: 85  EKRQWGLSAGVLKDCLSVLCSG-VNVEVW 2
           E   W  + GVLKDCL +  S  V + VW
Sbjct: 278 EMDHW-TTLGVLKDCLCIFASNDVFLNVW 305



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 386 DRIRSPYAFGYDYSAGYYKVICLXXXXXXXXXXVYTIG 273
           D+  S Y+FGYD     YK++ L          V+T+G
Sbjct: 181 DKHLSAYSFGYDNLINNYKIVALSLCKDKTEVSVHTLG 218


>ref|XP_011460760.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Fragaria
           vesca subsp. vesca]
          Length = 397

 Score = 50.1 bits (118), Expect(2) = 1e-05
 Identities = 27/88 (30%), Positives = 42/88 (47%)
 Frame = -1

Query: 265 SWKSTQIIPHWMYPVEEPGVLLNGVFHWLGYMTDNYSDVIISLDISVEKFKALQPPKVSL 86
           SW+  Q  P   +P+E+    +NG  HWL  +  N    II+LD++ E +  +  P    
Sbjct: 213 SWRRIQDYPRGAFPLEKCATYVNGALHWLAKIRQN-DPFIIALDLTSETYMEVAVPDYGT 271

Query: 85  EKRQWGLSAGVLKDCLSVLCSGVNVEVW 2
                G+  G L+ CL VL  G   ++W
Sbjct: 272 GSSFEGV--GALEGCLCVLVDGKETDLW 297



 Score = 25.8 bits (55), Expect(2) = 1e-05
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 368 YAFGYDYSAGYYKVICLXXXXXXXXXXVYTIGQNFMEKHSNHP 240
           + FGYDY++  YKV+ +          +YT+  +   +  ++P
Sbjct: 179 HGFGYDYNSDDYKVLKVYHKTTTCISMIYTLRTDSWRRIQDYP 221


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