BLASTX nr result

ID: Papaver29_contig00052387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00052387
         (872 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Popu...    60   2e-06
gb|KFK39982.1| hypothetical protein AALP_AA3G314600 [Arabis alpina]    60   3e-06
ref|XP_006384902.1| hypothetical protein POPTR_0004s22060g [Popu...    60   3e-06
ref|XP_011001779.1| PREDICTED: histone deacetylase 6 [Populus eu...    59   4e-06
ref|XP_010517803.1| PREDICTED: histone deacetylase 6-like [Camel...    59   4e-06
ref|XP_006353977.1| PREDICTED: histone deacetylase 6-like [Solan...    58   8e-06

>ref|XP_002313903.1| hypothetical protein POPTR_0009s09330g [Populus trichocarpa]
           gi|118483848|gb|ABK93815.1| unknown [Populus
           trichocarpa] gi|222850311|gb|EEE87858.1| hypothetical
           protein POPTR_0009s09330g [Populus trichocarpa]
          Length = 160

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  WVEALTSCDHLNSLSSQLSQIPTPDTPCNKC 1
           WVEA TSCDHL SLSS L+ IPTPDTPCN+C
Sbjct: 31  WVEARTSCDHLASLSSDLAHIPTPDTPCNRC 61


>gb|KFK39982.1| hypothetical protein AALP_AA3G314600 [Arabis alpina]
          Length = 145

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  WVEALTSCDHLNSLSSQLSQIPTPDTPCNKC 1
           WVEA TSCDHLNSLS  LS +PTPDTPC++C
Sbjct: 32  WVEARTSCDHLNSLSPDLSHLPTPDTPCSRC 62


>ref|XP_006384902.1| hypothetical protein POPTR_0004s22060g [Populus trichocarpa]
           gi|550341670|gb|ERP62699.1| hypothetical protein
           POPTR_0004s22060g [Populus trichocarpa]
          Length = 151

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 37/108 (34%), Positives = 51/108 (47%)
 Frame = +1

Query: 532 KKPICSTLKSSSKATNNRXXXXXXXXXXXXGTNTGQLVISEPDWAQLLKTRTKER**LVM 711
           +KP+ S  +   K+T+              G     L ++ PDW+++LK        LV 
Sbjct: 53  RKPVLSP-RLVKKSTSAAAACRPTDSREKTGGTPSSLPVNIPDWSRILKNEVPPHELLVR 111

Query: 712 NLLRIMMIRKFFHLF*QINPSFDFSVHEGIGRTLKGRDLSRVRNVVWD 855
            + R  +                FSVHEGIGRTLKGRDLSRVRN +W+
Sbjct: 112 QMARSRIA--------------SFSVHEGIGRTLKGRDLSRVRNAIWE 145


>ref|XP_011001779.1| PREDICTED: histone deacetylase 6 [Populus euphratica]
          Length = 160

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 33/63 (52%), Positives = 36/63 (57%)
 Frame = -3

Query: 189 MANCDGSSSFTIIPXXXXXXXXXXXXXXXXXGWVEALTSCDHLNSLSSQLSQIPTPDTPC 10
           MAN  G+SS T  P                 GWVEA TSCDHL SLSS L+ IP PDTPC
Sbjct: 1   MANQAGASSST--PLEPGFENDENDMYGAESGWVEARTSCDHLASLSSDLAHIPPPDTPC 58

Query: 9   NKC 1
           N+C
Sbjct: 59  NRC 61


>ref|XP_010517803.1| PREDICTED: histone deacetylase 6-like [Camelina sativa]
          Length = 121

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  WVEALTSCDHLNSLSSQLSQIPTPDTPCNKC 1
           WVEA TSCDHLNSLSS L  +PTPDTPC++C
Sbjct: 8   WVEARTSCDHLNSLSSDLIHLPTPDTPCSRC 38


>ref|XP_006353977.1| PREDICTED: histone deacetylase 6-like [Solanum tuberosum]
          Length = 216

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 93  WVEALTSCDHLNSLSSQLSQIPTPDTPCNKC 1
           WVEA T CDHL SLSS L+ IPTPDTPCN+C
Sbjct: 85  WVEAKTHCDHLASLSSDLTHIPTPDTPCNRC 115


Top