BLASTX nr result

ID: Papaver29_contig00048497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00048497
         (3350 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIC77183.1| polyprotein [Gossypium barbadense]                     331   0.0  
ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotei...   308   0.0  
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g...   276   0.0  
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]           276   0.0  
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   258   0.0  
emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group]                275   0.0  
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   330   0.0  
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   316   0.0  
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   255   0.0  
gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]     386   0.0  
gb|ABW74566.1| integrase [Boechera divaricarpa]                       315   0.0  
ref|NP_001059837.1| Os07g0528100, partial [Oryza sativa Japonica...   382   0.0  
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...   382   0.0  
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   305   0.0  
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   343   0.0  
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   282   0.0  
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]   483   0.0  
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  225   e-179
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   321   e-176
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   324   e-166

>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  331 bits (849), Expect(5) = 0.0
 Identities = 175/381 (45%), Positives = 233/381 (61%), Gaps = 2/381 (0%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTND--VDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHI 1999
            +K +ISRD+ FDE  +W W   +  V+     EDD       +  +P  + PSSP     
Sbjct: 757  KKLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPT---- 812

Query: 1998 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 1819
                  +  G                   ++ P  T        DY L            
Sbjct: 813  ------SSSGSSSLDEAPTRTRSLNDIYNSTEPVET------QFDYSL-----------F 849

Query: 1818 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 1639
             L    DPV++++ +++ KW  AMD EI AI + +TWEL  LP GH PIGVKWVYKTK N
Sbjct: 850  CLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTN 909

Query: 1638 SDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 1459
             +G V+KYK RL+ KGY Q + VDYDE+F+PVAR DTI+LLIA+AAQ  W ++Q+DVKSA
Sbjct: 910  KEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSA 969

Query: 1458 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKS 1279
            FLNG L+E VY++QPPGY  +G E KVYRL+K+LYGLKQAPRAW +RI  YF + GF KS
Sbjct: 970  FLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNGFIKS 1029

Query: 1278 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 1099
            PHE TL+ +    G+ ++VCLYVDD+I+T N+  + ++FK +M  EFEM+D+G + YFLG
Sbjct: 1030 PHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMTKEFEMTDIGEMSYFLG 1089

Query: 1098 LEVVQSSGGTFLS*KKYVSEI 1036
            +EV Q   G F+S KKY  +I
Sbjct: 1090 VEVKQMQDGIFVSQKKYAEQI 1110



 Score =  234 bits (598), Expect(5) = 0.0
 Identities = 120/246 (48%), Positives = 157/246 (63%), Gaps = 5/246 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHMCG K  F++LDET    + FGDNS   +KG   +    +N  ++ IS+V+YVP LK
Sbjct: 359  SNHMCGRKELFTELDETVHGQITFGDNSHAEIKGKGKVVITQRNGEKKYISDVYYVPALK 418

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            SNL+S+GQLLEKGYE+ +K+    I +    L+ +V MTRNR+F L + +  + C  + +
Sbjct: 419  SNLISLGQLLEKGYEVHMKDRSLAIRNKSGELVVRVDMTRNRLFTLDIESGEVKCMKTDL 478

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
             N SWLWHLRYGHL F GL +L + +MV GLP I+  +QLCE CV GKQ+R  F      
Sbjct: 479  KNESWLWHLRYGHLGFSGLKLLSKTNMVNGLPSINHPDQLCEACVKGKQHRQKFEVGKSR 538

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFKVL 2644
            RA++ LE+VHTDI GP    S G  RY+     +   K  VYFL AKSEA   FKEFK +
Sbjct: 539  RARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAM 598

Query: 2643 VEKDAG 2626
            VEK +G
Sbjct: 599  VEKQSG 604



 Score =  200 bits (509), Expect(5) = 0.0
 Identities = 94/156 (60%), Positives = 119/156 (76%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            K LRSDRGGEY +  +  FCK  GI  Q TA  TPQQNGVAERKNRTIL+M RS++    
Sbjct: 608  KILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKH 667

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P+ FW E V+  VY+LN+ PT+SV + TP EAWSG KPRV HL++FGCIAYAHV +++R
Sbjct: 668  LPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQR 727

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            KKLDD+G KCIF+GY   SKAY+ ++P+T+K+  SR
Sbjct: 728  KKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISR 763



 Score =  192 bits (489), Expect(5) = 0.0
 Identities = 89/161 (55%), Positives = 114/161 (70%)
 Frame = -3

Query: 762  FYTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            FYT      L+G++DSDY GD DDR+STSGYAF   S V SW SKKQQ ++LST EAEY+
Sbjct: 1201 FYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIALSTCEAEYM 1260

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            AA++C CQA+WL+ +L E+    +G  TI+ DN S I L+KNPV H R+KHI   YHFIR
Sbjct: 1261 AAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKHIDTKYHFIR 1320

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            + V +  V++ HCR+ED LADIFTKPLK   F   ++ LG+
Sbjct: 1321 EQVKNKNVELVHCRTEDQLADIFTKPLKVETFNKFKEKLGM 1361



 Score =  102 bits (254), Expect(5) = 0.0
 Identities = 50/92 (54%), Positives = 65/92 (70%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF+   C  V TPA+ GMKL  D   + ++ TL+K +VGSL YLT +RPDITY V L+
Sbjct: 1111 LNKFKMKDCKPVVTPADPGMKLSVDSTRESINPTLFKSLVGSLRYLTITRPDITYAVGLV 1170

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            SR+ME P + HL  AKRILRY+KGT + G+F+
Sbjct: 1171 SRFMEKPKQDHLIAAKRILRYIKGTMNHGLFY 1202


>ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Malus domestica]
          Length = 1750

 Score =  308 bits (790), Expect(5) = 0.0
 Identities = 171/388 (44%), Positives = 228/388 (58%), Gaps = 10/388 (2%)
 Frame = -3

Query: 2169 KKLISRDIVFDETRFWNWKTNDVDEFIPV-----EDDFVGSTSPEIHTPVISPPSSPEPQ 2005
            K ++SRD+VFDE+  WNWK N              ++ VG    E+     S  S   P 
Sbjct: 765  KLILSRDVVFDESMTWNWKENPQSSAAATYIQDQPENVVGMNPYEMSVIEGSSLSPSSPF 824

Query: 2004 HIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDY-----QLQVSGD 1840
            HI    + T +                                  EDY     + +   D
Sbjct: 825  HIQEQESCTPESAKLS-----------------------------EDYDHTPLKWRNLDD 855

Query: 1839 DSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKW 1660
              +Q +L +    +P  +++  QD  WL AM  E+  I+K  TWEL D P     IGVKW
Sbjct: 856  IFAQCNLCVM---EPERYEEAAQDESWLRAMQDELTMIEKNGTWELVDRPTMQPVIGVKW 912

Query: 1659 VYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVF 1480
            VYKTK N DG V K K RL+ KGYAQ+   DY+E ++PVAR DTI+ LIALAAQ SW ++
Sbjct: 913  VYKTKLNLDGTVLKNKARLVAKGYAQKPGFDYNETYAPVARLDTIRTLIALAAQKSWRLY 972

Query: 1479 QLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFI 1300
            QLDVKSAFLNG LQE VYVDQP G+  +G E KVYRL KALYGLKQAPRAWY  I AYF 
Sbjct: 973  QLDVKSAFLNGVLQEEVYVDQPEGFTVQGKEDKVYRLHKALYGLKQAPRAWYGEIDAYFS 1032

Query: 1299 KMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLG 1120
            + GFQKS  EPTL+++++ + + ++V +YVDD++YT + + + EEFK  MM ++EM+DLG
Sbjct: 1033 QCGFQKSLSEPTLYIKSRGEKDIIIVSIYVDDIVYTGSSKEMLEEFKEDMMMKYEMTDLG 1092

Query: 1119 MLHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            +LH+FLG+ V+Q++   F+  KKY S +
Sbjct: 1093 LLHHFLGMGVIQTNFSIFIHQKKYASSL 1120



 Score =  185 bits (469), Expect(5) = 0.0
 Identities = 82/156 (52%), Positives = 113/156 (72%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            K+LRSDRGGE+ S+EF  FC+ +GI+RQ T A+TPQQNGV ERKNRT++ M +++L+  G
Sbjct: 615  KSLRSDRGGEFLSSEFTKFCETEGIQRQLTMAYTPQQNGVVERKNRTVVEMAKTMLHDRG 674

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P   W E V   VY+LNR PT ++ NMTP EA+SG KP ++HL++FG + Y HV  E R
Sbjct: 675  MPYVLWAEAVHTAVYILNRCPTMALGNMTPFEAYSGRKPGIAHLKIFGSLCYVHVPTETR 734

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLD K +K +F+GY+   K Y+ F+P T K+  SR
Sbjct: 735  QKLDAKSIKGVFVGYATCEKGYRIFBPCTNKLILSR 770



 Score =  169 bits (428), Expect(5) = 0.0
 Identities = 80/158 (50%), Positives = 107/158 (67%)
 Frame = -3

Query: 759  YTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIA 580
            Y KG   +L+GF DSD+ G  DD +STSGYAF FGSGV SW S KQ  V+LST EAEYI+
Sbjct: 1212 YVKGKNAMLIGFCDSDWGGSVDDSKSTSGYAFSFGSGVFSWASVKQNCVALSTAEAEYIS 1271

Query: 579  ASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRD 400
            AS    QA+WLR +L +    Q  +T + CDN++ I ++KNPVFH +TKHI   YHFI++
Sbjct: 1272 ASEATVQAIWLRFVLEDFGEMQTEATPVHCDNTAAIAITKNPVFHQKTKHIDRRYHFIKN 1331

Query: 399  LVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLL 286
             + +G +D+ +C + + +ADIFTK L    F  LR +L
Sbjct: 1332 ALQEGIIDLVYCPTNEQVADIFTKALSKDRFNYLRDML 1369



 Score =  168 bits (425), Expect(5) = 0.0
 Identities = 93/248 (37%), Positives = 134/248 (54%), Gaps = 7/248 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHM G+     D+       V+      + V G+  ++    N  ++ I  V ++PGLK
Sbjct: 365  SNHMTGNADLLVDIRTNVXGKVQMXTXVLVNVAGMGSLEIDT-NKGKKYIREVMHLPGLK 423

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKR--GLITQVQMTRNRMFPLFLRNDVLPCFSS 2995
             NLLSVGQ+ E GY L    G+C + D      L+ + +   NR + L L  D      +
Sbjct: 424  ENLLSVGQMDEHGYYLVFGGGLCSVFDGPSLDNLVIKXKKKENRCYXLSLLQDNRLVXKA 483

Query: 2994 IVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKES 2815
             +++ +  WH R GHLNF+GL  L +++MV GLP ++  + +C+GC  GKQ RD FPK  
Sbjct: 484  SIDHSTRTWHRRLGHLNFRGLKQLXEKNMVHGLPYLEEIKDVCQGCQFGKQXRDWFPKNQ 543

Query: 2814 KWRAKKVLELVHTDICGPITPLSNGNKRYFNLV-----AKLGVYFLNAKSEAFSVFKEFK 2650
             WRA    EL+H D+CGP+   S    RYF L+       + VYFL  KS+AF+ FK FK
Sbjct: 544  SWRANCPXELIHXDLCGPMXNASLAGNRYFMLLIDDXTRMIWVYFLRYKSDAFNYFKRFK 603

Query: 2649 VLVEKDAG 2626
             +VE  +G
Sbjct: 604  SMVELQSG 611



 Score = 94.7 bits (234), Expect(5) = 0.0
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF  + C SV TP     KL KD      +   Y+KIVGSL+YLT +RPDI Y  SL+
Sbjct: 1121 LNKFGLNECKSVSTPLISAEKLSKDDGSGPANEEQYRKIVGSLLYLTATRPDIMYAASLL 1180

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFFIR 753
            SR+M +PT  H   AKR+LRY+KGT D G+ +++
Sbjct: 1181 SRFMHSPTNKHYGTAKRVLRYIKGTLDYGLEYVK 1214


>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
            gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|31430018|gb|AAP51989.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
            [Oryza sativa Japonica Group]
          Length = 1426

 Score =  276 bits (706), Expect(5) = 0.0
 Identities = 159/385 (41%), Positives = 215/385 (55%), Gaps = 10/385 (2%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTND----------VDEFIPVEDDFVGSTSPEIHTPVISPPSSPE 2011
            +SRD+VFDE   W W+  +          VD F+   D  V     +  TPV        
Sbjct: 793  VSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPV---QGGTY 849

Query: 2010 PQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSS 1831
            P   ATP +P E                  +    R RR  +  S  E     +  D S 
Sbjct: 850  PASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSATEPV---LDFDYSD 906

Query: 1830 QIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 1651
            Q    L A  +P+S  +  Q   W  AM  E+K+I+   TW  A+LP GHK IG+KWVYK
Sbjct: 907  Q---CLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYK 963

Query: 1650 TKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 1471
             K +  G+V K+K RL+ KGY Q++ +D++EVF+PVAR +T++LLIA+AA   W +  +D
Sbjct: 964  VKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMD 1023

Query: 1470 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMG 1291
            VKSAFLNGDL+E VYV QPPG++ KG E +V RL+KALYGLKQAPRAW +++    I + 
Sbjct: 1024 VKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLN 1083

Query: 1290 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 1111
            F KS  E  ++V+       L+V +YVDDLI +       + FK  M  +F MSDLG+L 
Sbjct: 1084 FIKSETESAVYVRGTGSSR-LIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLS 1142

Query: 1110 YFLGLEVVQSSGGTFLS*KKYVSEI 1036
            Y+LG+EVVQ   G FLS   Y ++I
Sbjct: 1143 YYLGMEVVQKDDGVFLSQTAYAAKI 1167



 Score =  206 bits (525), Expect(5) = 0.0
 Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G +S F++LD   + TVKFGD S I ++G   + F+ KN+  + +  V+Y+P L+
Sbjct: 391  TNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNSDHRSLDTVYYIPKLR 450

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++SVG+L  +GY+  +  GVC + DP   L+ +V+   N ++ L L      C ++  
Sbjct: 451  KNIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASG 510

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
             + +W WH R+GHLNF+ L  L Q +MV+GLP ID  +QLC+GC+ GKQ R  FP+E+K+
Sbjct: 511  GDMAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKF 570

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVA-----KLGVYFLNAKSEAFSVFKEFKVL 2644
            RA++ LELVH D+CGPITP + G ++YF L+       + +  L+ K EA +  K+F+V 
Sbjct: 571  RAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVG 630

Query: 2643 VEKDAGCLIR 2614
            VE ++G  +R
Sbjct: 631  VELESGRKLR 640



 Score =  173 bits (439), Expect(5) = 0.0
 Identities = 76/156 (48%), Positives = 108/156 (69%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            + LR+DRGGE+ S EF D+C   G++R+ TA ++PQQNGV ER+N+T++   RS+L  +G
Sbjct: 640  RALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAG 699

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P  FW E V   VYVLNRSPT+++  +TP EAW G +P V HLRVFGC+ Y        
Sbjct: 700  MPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNL 759

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLDD+G + +F+GY   SKAY+ +DP+  ++  SR
Sbjct: 760  RKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSR 795



 Score =  163 bits (413), Expect(5) = 0.0
 Identities = 79/152 (51%), Positives = 106/152 (69%)
 Frame = -3

Query: 735  LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCACQA 556
            L+GF+DSD AGD DDR+ST+G  +M G  +ISW S+KQ++V+LS+ EAEYIAA++ ACQ 
Sbjct: 1269 LIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSSCEAEYIAATTGACQG 1328

Query: 555  VWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVNDGTVD 376
            +WL RLLAE+     G T +  DN S I L KNPV H R+KHI   +HFIR+ V    + 
Sbjct: 1329 IWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIA 1388

Query: 375  IQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            +++ R+ED LADI TKP+    F  LRK +G+
Sbjct: 1389 VEYVRTEDQLADILTKPVGRVRFLELRKKMGL 1420



 Score = 95.5 bits (236), Expect(5) = 0.0
 Identities = 46/105 (43%), Positives = 65/105 (61%)
 Frame = -1

Query: 1040 KYLCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVS 861
            K L K   + CNS + P E  +KL+++  G+ VDST+Y+  VGSL YL  +RPD+ Y V 
Sbjct: 1166 KILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRPDLAYSVG 1225

Query: 860  LISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFFIRKVPNQFCLV 726
             +SR+ME PT  H    K ILRY+ GT D+G +F R+   +  L+
Sbjct: 1226 YVSRFMEKPTSEHWAAVKHILRYIAGTLDVGCWFGRREKGELRLI 1270


>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
          Length = 1426

 Score =  276 bits (706), Expect(5) = 0.0
 Identities = 159/385 (41%), Positives = 215/385 (55%), Gaps = 10/385 (2%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTND----------VDEFIPVEDDFVGSTSPEIHTPVISPPSSPE 2011
            +SRD+VFDE   W W+  +          VD F+   D  V     +  TPV        
Sbjct: 793  VSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPV---QGGTY 849

Query: 2010 PQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSS 1831
            P   ATP +P E                  +    R RR  +  S  E     +  D S 
Sbjct: 850  PASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSATEPV---LDFDYSD 906

Query: 1830 QIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 1651
            Q    L A  +P+S  +  Q   W  AM  E+K+I+   TW  A+LP GHK IG+KWVYK
Sbjct: 907  Q---CLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYK 963

Query: 1650 TKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 1471
             K +  G+V K+K RL+ KGY Q++ +D++EVF+PVAR +T++LLIA+AA   W +  +D
Sbjct: 964  VKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMD 1023

Query: 1470 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMG 1291
            VKSAFLNGDL+E VYV QPPG++ KG E +V RL+KALYGLKQAPRAW +++    I + 
Sbjct: 1024 VKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLN 1083

Query: 1290 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 1111
            F KS  E  ++V+       L+V +YVDDLI +       + FK  M  +F MSDLG+L 
Sbjct: 1084 FIKSETESAVYVRGTGSSR-LIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLS 1142

Query: 1110 YFLGLEVVQSSGGTFLS*KKYVSEI 1036
            Y+LG+EVVQ   G FLS   Y ++I
Sbjct: 1143 YYLGMEVVQKDDGVFLSQTAYAAKI 1167



 Score =  201 bits (511), Expect(5) = 0.0
 Identities = 102/250 (40%), Positives = 158/250 (63%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G +S F++LD   + TVKFGD S I ++G   + F+ KN   + +  V+Y+P L+
Sbjct: 391  TNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDTVYYIPKLR 450

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++SVG+L  +GY+  +  GVC + DP   L+ +V+   N ++ L L      C ++  
Sbjct: 451  KNIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIANPVCMAASG 510

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
             + +  WH R+GHLNF+ L  L Q +MV+GLP ID  +QLC+GC+ GKQ R  FP+E+K+
Sbjct: 511  GDTARRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKF 570

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVA-----KLGVYFLNAKSEAFSVFKEFKVL 2644
            RA++ LELVH D+CGPITP + G ++YF L+       + +  L+ K EA +  K+F+V 
Sbjct: 571  RAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVG 630

Query: 2643 VEKDAGCLIR 2614
            VE ++G  +R
Sbjct: 631  VELESGRKLR 640



 Score =  173 bits (439), Expect(5) = 0.0
 Identities = 76/156 (48%), Positives = 108/156 (69%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            + LR+DRGGE+ S EF D+C   G++R+ TA ++PQQNGV ER+N+T++   RS+L  +G
Sbjct: 640  RALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAG 699

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P  FW E V   VYVLNRSPT+++  +TP EAW G +P V HLRVFGC+ Y        
Sbjct: 700  MPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNL 759

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLDD+G + +F+GY   SKAY+ +DP+  ++  SR
Sbjct: 760  RKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSR 795



 Score =  163 bits (413), Expect(5) = 0.0
 Identities = 79/152 (51%), Positives = 106/152 (69%)
 Frame = -3

Query: 735  LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCACQA 556
            L+GF+DSD AGD DDR+ST+G  +M G  +ISW S+KQ++V+LS+ EAEYIAA++ ACQ 
Sbjct: 1269 LIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSSCEAEYIAATTGACQG 1328

Query: 555  VWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVNDGTVD 376
            +WL RLLAE+     G T +  DN S I L KNPV H R+KHI   +HFIR+ V    + 
Sbjct: 1329 IWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIA 1388

Query: 375  IQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            +++ R+ED LADI TKP+    F  LRK +G+
Sbjct: 1389 VEYVRTEDQLADILTKPVGRVRFLELRKKMGL 1420



 Score = 95.5 bits (236), Expect(5) = 0.0
 Identities = 46/105 (43%), Positives = 65/105 (61%)
 Frame = -1

Query: 1040 KYLCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVS 861
            K L K   + CNS + P E  +KL+++  G+ VDST+Y+  VGSL YL  +RPD+ Y V 
Sbjct: 1166 KILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRPDLAYSVG 1225

Query: 860  LISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFFIRKVPNQFCLV 726
             +SR+ME PT  H    K ILRY+ GT D+G +F R+   +  L+
Sbjct: 1226 YVSRFMEKPTSEHWAAVKHILRYIAGTLDVGCWFGRREKGELRLI 1270


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  258 bits (660), Expect(5) = 0.0
 Identities = 146/381 (38%), Positives = 223/381 (58%), Gaps = 5/381 (1%)
 Frame = -3

Query: 2163 LISRDIVFDETRFWNWKTNDVDEFIPVEDDFV----GSTSPEIHTPVISPPSSPEPQHIA 1996
            ++SRD+ FDE   WNW  N+ D+    E        GS+  E + P +    S + ++IA
Sbjct: 609  VVSRDVKFDEKACWNW--NETDKGNQEESGKFHMTWGSSIDEGNGPFVI--GSHQEENIA 664

Query: 1995 TPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHLA 1816
            T     E+                  V   R  R +  P  +EDY L        +  L 
Sbjct: 665  TETEQQEE--------TTEPTPEVDHVEPRRSSREVKLPKHLEDYILLAE----IECELL 712

Query: 1815 LFAGSD-PVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 1639
            L + +D P ++++     +W  A + EI +I++  TW+L D P+G K IG+KW++K K N
Sbjct: 713  LCSINDEPSTYQEAKIHVRWTKACEDEIDSINRNQTWKLVDKPHGVKVIGLKWIFKIKRN 772

Query: 1638 SDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 1459
            +DG ++K+K RL+ KGY QE  +D++EVF+PVAR ++I+LLI+LA+   W +  LDVK+A
Sbjct: 773  ADGSINKFKARLVAKGYVQEHGIDFEEVFAPVARIESIRLLISLASAKGWELHHLDVKTA 832

Query: 1458 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKS 1279
            FL+G+L E VYV QP G+ +KG E KV++L KALYGL+QAPRAW +++      + F+K 
Sbjct: 833  FLHGELNEEVYVTQPEGFEKKGEEHKVFKLSKALYGLRQAPRAWNTKLDRVLKSLRFKKC 892

Query: 1278 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 1099
              E +++ + + D   L++ +YVDDL  T N   + +EFK +M  +FEMSDLG+L Y+LG
Sbjct: 893  MKESSVYRREEGD-KLLIIAIYVDDLFVTGNSTKIIKEFKTAMSHKFEMSDLGLLTYYLG 951

Query: 1098 LEVVQSSGGTFLS*KKYVSEI 1036
            +EV QS+ G  +  + Y   I
Sbjct: 952  IEVKQSTRGITIKQEAYAKRI 972



 Score =  212 bits (540), Expect(5) = 0.0
 Identities = 102/249 (40%), Positives = 158/249 (63%), Gaps = 5/249 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHM GDKSFFS+L+E+    VKFGD S + + G   I F+AK   Q++++N++Y+P L+
Sbjct: 208  SNHMTGDKSFFSELNESIKGRVKFGDGSCVKINGKGSIIFEAKTGEQKLLTNIYYIPELR 267

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            SN+LS+GQ  E+G ++ +K+    + DP   L+ +V  + NR++ + L+     C  + +
Sbjct: 268  SNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKVLRSPNRLYKVSLKVGKPSCLLTKI 327

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
            N   W WH R GH+NFK +  + + +MV+GLP+I+ +++LCE C+VGKQ R+SFP  +  
Sbjct: 328  NEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTRNSFPSATPH 387

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            R+ +VLEL+H D+CGPI+P +    RY  ++       +    L  KSE F  FK FK L
Sbjct: 388  RSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEKSEVFEKFKTFKAL 447

Query: 2643 VEKDAGCLI 2617
            VEK+   +I
Sbjct: 448  VEKEVNKVI 456



 Score =  164 bits (416), Expect(5) = 0.0
 Identities = 75/155 (48%), Positives = 104/155 (67%)
 Frame = -2

Query: 2614 TLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGV 2435
            TLR+DRGGE+ S +F D+C  +GI+R  TA +TPQQNGV ER+NRT++ M RS+L    V
Sbjct: 458  TLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNV 517

Query: 2434 PKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRK 2255
            P   W E V+   Y++NR PT+++ N TP E++ G KP + H+RVFGC+AYA +     K
Sbjct: 518  PNYMWGEAVRHATYLINRVPTRALKNQTPYESFKGRKPSIGHIRVFGCLAYAKLDAALLK 577

Query: 2254 KLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            KLDD+    + LG    SKAY+ ++P T +I  SR
Sbjct: 578  KLDDRSQTLVHLGIEPGSKAYRLYNPSTRRIVVSR 612



 Score =  149 bits (376), Expect(5) = 0.0
 Identities = 72/165 (43%), Positives = 107/165 (64%)
 Frame = -3

Query: 759  YTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIA 580
            + +G+   L+G++DS +  DPDD RST+G+ F  G+  I+WCS+KQ  V+LS+ EAE++A
Sbjct: 1064 FKRGSTQKLVGYSDSSHNTDPDDGRSTTGHLFCLGNTPITWCSQKQDTVALSSCEAEFMA 1123

Query: 579  ASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRD 400
            A+  A QA+WL+ LL+EV   +   T I  DN S I L+KNPVFH R+KHI   +HFIR+
Sbjct: 1124 ATEAAKQAIWLQELLSEVTGGETEKTLILVDNKSAISLAKNPVFHRRSKHIHKRFHFIRE 1183

Query: 399  LVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGVCSFTE 265
             V    +D++H    +  ADI TK L    F+ +R ++ V + +E
Sbjct: 1184 CVERNLIDVEHVPGTEQKADILTKALAKIKFKEMRSMIEVQNLSE 1228



 Score = 77.4 bits (189), Expect(5) = 0.0
 Identities = 36/86 (41%), Positives = 54/86 (62%)
 Frame = -1

Query: 1010 CNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLISRYMEAPT 831
            CN    P E G++  K     ++D+T Y++ +G L YL  +RPD+ Y V ++SRYM++P 
Sbjct: 981  CNPNCIPMEFGLQFSKALDEPEIDATQYRRKIGCLRYLMHTRPDMAYSVGILSRYMQSPR 1040

Query: 830  EMHLNVAKRILRYLKGTPDLGIFFIR 753
            E H N  K++LRYL+GT   G+ F R
Sbjct: 1041 ESHGNALKQVLRYLQGTLGHGLEFKR 1066


>emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group]
          Length = 1454

 Score =  275 bits (703), Expect(5) = 0.0
 Identities = 152/392 (38%), Positives = 219/392 (55%), Gaps = 17/392 (4%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTNDVDEFIPVEDDFV---------GSTSPEIHTPVISPPSSPEP 2008
            ++RD++FDE+R W+W      +   +  DF          G   P +   V++P +SP P
Sbjct: 802  LARDVIFDESRGWDWTAASGTD-ARLSSDFAIEYHVEKTTGHPIPSVGGGVVTPSASPTP 860

Query: 2007 QHI---ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPR-----RTINRPSWMEDYQLQ 1852
                  ATP  P                     +  +        RT++           
Sbjct: 861  LQETSPATPATPAPSPSVAPTEFVSPPSHDEERIDAAHSNTPVRYRTVDNLIGENAPAPG 920

Query: 1851 VSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPI 1672
            ++  +  +  L L    +P SF +   D  W  AM  E+ A+++   WEL DLP+GH+PI
Sbjct: 921  IAQRELEEASLLLAGPGEPCSFAEAEGDDAWRAAMREEMDAVNRNGIWELVDLPHGHRPI 980

Query: 1671 GVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNS 1492
            G+KWVYK K N  G V K+K RL+ +G+ Q+  +D+DEVF+PVAR ++I+LL+A+AAQ  
Sbjct: 981  GLKWVYKLKKNEAGKVVKHKARLVARGFVQQPGIDFDEVFAPVARMESIRLLLAVAAQKG 1040

Query: 1491 WPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI* 1312
            W V  +DVKSAFLNGDL E VYV QPPG+V  G E KV RLRKALYGL+QAPRAW +++ 
Sbjct: 1041 WHVHHMDVKSAFLNGDLAEEVYVKQPPGFVVAGEEDKVLRLRKALYGLRQAPRAWNAKLD 1100

Query: 1311 AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEM 1132
                ++GF +S HE  ++ +    G+ L+V +YVDDL+ T       E+FK  M A+F+M
Sbjct: 1101 CTLKELGFDQSKHEHAMY-RRNNGGSALLVGVYVDDLVITGPSTRAIEQFKEEMKAKFQM 1159

Query: 1131 SDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            SDLG+L ++LG+EV Q   G  L+  +Y   I
Sbjct: 1160 SDLGLLSFYLGIEVKQGDDGISLNQGRYAQRI 1191



 Score =  189 bits (479), Expect(5) = 0.0
 Identities = 96/253 (37%), Positives = 160/253 (63%), Gaps = 8/253 (3%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G    F++LD +   TVKFGD+S + +KG  ++ F  KN   +V+S V+Y+P LK
Sbjct: 401  TNHMTGRGDVFAELDRSVTGTVKFGDSSIVDIKGAGNVIFTGKNGEHKVLSGVYYIPRLK 460

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            S+++S+GQL E    + +++G+ RI D +R L+ +++  R+R++ L L      C ++  
Sbjct: 461  SSIISIGQLDESETRVLVEDGIMRIWDRRRRLLAKIKRGRSRLYVLRLEVARPICLATRH 520

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
            ++ +W W+ R+GH++F  L  + ++++V+GLP+++  EQLC+ CV+ K  R +FPK +K+
Sbjct: 521  DDVAWRWYERFGHIHFGSLEKMGRQELVRGLPRLEHVEQLCDTCVITKHRRAAFPKAAKY 580

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            RA++ L+LVH DICGPITP + G +RYF L+       + V  L AKS A    K+ ++ 
Sbjct: 581  RAQEPLDLVHGDICGPITPATPGGRRYFLLLVDDATRYMWVALLAAKSNAPDAIKKIQMA 640

Query: 2643 VEKDAG---CLIR 2614
             E   G   C+ R
Sbjct: 641  AETHYGRKLCVFR 653



 Score =  156 bits (395), Expect(5) = 0.0
 Identities = 72/153 (47%), Positives = 105/153 (68%)
 Frame = -2

Query: 2608 RSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPK 2429
            R+D GGE+ S EFA +C  +GI+R F+A + PQQNGV ER+N+T+++M R++L   G+P 
Sbjct: 653  RTDNGGEFTSLEFAAYCTDEGIQRHFSAPYAPQQNGVVERRNQTVVSMARALLKQRGMPA 712

Query: 2428 KFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKL 2249
            +FW E V   V++LN +PT+S+   TP EAW G+KP VS LR FGC+AY    ++ R KL
Sbjct: 713  EFWGEAVSTAVFLLNCAPTKSLTGKTPYEAWHGKKPMVSFLRTFGCLAYVKELNDVR-KL 771

Query: 2248 DDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            DD+    +F+GY +  KAY+  DP T ++  +R
Sbjct: 772  DDRSTPGVFIGYEEGVKAYRVLDPRTRRVRLAR 804



 Score =  147 bits (372), Expect(5) = 0.0
 Identities = 72/157 (45%), Positives = 103/157 (65%)
 Frame = -3

Query: 735  LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCACQA 556
            L+G++DSD AGD D RRSTSG  F   S ++SW S KQ++V+LS+ EAEY+AA++ A Q 
Sbjct: 1292 LIGYSDSDLAGDIDTRRSTSGMLFFLDSSLVSWQSIKQRVVALSSCEAEYVAATNAATQG 1351

Query: 555  VWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVNDGTVD 376
            +WL RLL E+   Q  +  +  D+ S + L+KNPVFH R+KHI + YHFIRD + +G+++
Sbjct: 1352 IWLARLLGELLGKQPKAIELKVDSKSALALAKNPVFHERSKHIDLRYHFIRDCLEEGSIN 1411

Query: 375  IQHCRSEDNLADIFTKPLKFAAFENLRKLLGVCSFTE 265
                 + D LADI TK L    F+ LR  +G+    +
Sbjct: 1412 ASFITTMDQLADILTKALGRVKFQELRAKIGMVQINQ 1448



 Score = 89.0 bits (219), Expect(5) = 0.0
 Identities = 41/91 (45%), Positives = 58/91 (63%)
 Frame = -1

Query: 1010 CNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLISRYMEAPT 831
            CN   TP E  +KL +D     VD+T Y+++VGSL YL  +RPD+ + V  +SR+ME PT
Sbjct: 1200 CNPCATPMEERLKLSRDSTAPPVDATKYRRLVGSLRYLVHTRPDLAFAVGFVSRFMERPT 1259

Query: 830  EMHLNVAKRILRYLKGTPDLGIFFIRKVPNQ 738
            E H+   KRILRY+ GT + G+ + R+   Q
Sbjct: 1260 EEHMVAVKRILRYVAGTMEYGLHYKREKEEQ 1290


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  328 bits (842), Expect(4) = 0.0
 Identities = 170/381 (44%), Positives = 242/381 (63%), Gaps = 2/381 (0%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTNDVD-EFIP-VEDDFVGSTSPEIHTPVISPPSSPEPQHI 1999
            +K +ISR+++FDE   W+W++N+ D  F P  E++ V     E  TP  SP +S +    
Sbjct: 2087 KKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFEEENVEQPREEPATPPTSPTTSSQGDE- 2145

Query: 1998 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 1819
                                          S   RT    S  + Y++  + D+ +    
Sbjct: 2146 ------------------------------SSSERTPRFRSLQDIYEVTENQDNLTLF-- 2173

Query: 1818 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 1639
             LFA  +P++F++  +   W  AMD EIK+I K +TWELA LP GHK IGVKWVYK K N
Sbjct: 2174 CLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKN 2233

Query: 1638 SDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 1459
            S G V++YK RL+ KGY+Q   +DYDEVF+PVAR +T++L+I+LAAQ SW + Q+DVKSA
Sbjct: 2234 SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSA 2293

Query: 1458 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKS 1279
            FLNGDL+E VY++QP GY+ +G E KV RL+KALYGLKQAPRAW +RI  YF + GF K 
Sbjct: 2294 FLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIKC 2353

Query: 1278 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 1099
            P+E  L+++ + + + L+ CLYVDDLI+T N+ +++E+FK  M  EFEM+D+G++ Y+LG
Sbjct: 2354 PYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 2412

Query: 1098 LEVVQSSGGTFLS*KKYVSEI 1036
            +EV Q   G F++ + Y  E+
Sbjct: 2413 IEVKQEENGIFITQEGYAKEV 2433



 Score =  201 bits (511), Expect(4) = 0.0
 Identities = 104/191 (54%), Positives = 128/191 (67%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            FSRKTW    + K   F   ++      +   +  K++RSDRGGE+ S EF  +C+ +GI
Sbjct: 1903 FSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGI 1962

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
            +RQ T   TPQQNGVAERKNRTIL M RS+L +  +PK+ W E V   VY+ NRSPT+SV
Sbjct: 1963 RRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSV 2022

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
            +  TP EAWSG KP VSHLRVFG IA+AHV DEKR KLDDK  K IF+GY   SK YK +
Sbjct: 2023 LEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLY 2082

Query: 2182 DPITEKIDQSR 2150
            +P T+K   SR
Sbjct: 2083 NPETKKTIISR 2093



 Score =  177 bits (449), Expect(4) = 0.0
 Identities = 82/150 (54%), Positives = 107/150 (71%)
 Frame = -3

Query: 735  LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCACQA 556
            L+G++DSD+ GD DDR+STSG+ F  G    +W SKKQ IV+LST EAEY+AA+SC C A
Sbjct: 2533 LVGYSDSDWGGDVDDRKSTSGFVFFIGETAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 2592

Query: 555  VWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVNDGTVD 376
            +WLR LL +++ PQ+  T IF DN S I L+KNPVFH R+KHI   YH+IRD V    V 
Sbjct: 2593 IWLRNLLKDLNLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRDCVTKMDVQ 2652

Query: 375  IQHCRSEDNLADIFTKPLKFAAFENLRKLL 286
            +++ ++ D +ADIFTKPLK   F  +R LL
Sbjct: 2653 LKYVKTNDQVADIFTKPLKREDFIKMRSLL 2682



 Score =  106 bits (264), Expect(4) = 0.0
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF+ D  N V TP E G+KL K+ +G+ VD TL+K +VGSL YLT +RPDI + V ++
Sbjct: 2434 LKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDILHAVGVV 2493

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            SRYME PT  H   AKRILRY+KGT + G+++
Sbjct: 2494 SRYMEHPTTTHFKAAKRILRYIKGTINFGLYY 2525



 Score =  330 bits (846), Expect(4) = 0.0
 Identities = 171/381 (44%), Positives = 242/381 (63%), Gaps = 2/381 (0%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTNDVD-EFIP-VEDDFVGSTSPEIHTPVISPPSSPEPQHI 1999
            +K +ISR+++FDE   W+W++N+ D  F P  E++ V     E  TP  SP +S +    
Sbjct: 748  KKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFEEENVEQPREEPATPPTSPTTSSQGDE- 806

Query: 1998 ATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHL 1819
                                          S   RT    S  + Y++  + D+ +    
Sbjct: 807  ------------------------------SSSERTPRFRSLQDIYEVTENQDNLTLF-- 834

Query: 1818 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 1639
             LFA  +P++F++  +   W  AMD EIK+I K +TWELA LP GHK IGVKWVYK K N
Sbjct: 835  CLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKN 894

Query: 1638 SDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 1459
            S G V++YK RL+ KGY+Q   +DYDEVF+PVAR +T++L+I+LAAQ SW + Q+DVKSA
Sbjct: 895  SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSA 954

Query: 1458 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKS 1279
            FLNGDL+E VY++QP GY+ KG E KV RL+KALYGLKQAPRAW +RI  YF + GF K 
Sbjct: 955  FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIKC 1014

Query: 1278 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 1099
            P+E  L+++ + + + L+ CLYVDDLI+T N+ +++E+FK  M  EFEM+D+G++ Y+LG
Sbjct: 1015 PYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 1073

Query: 1098 LEVVQSSGGTFLS*KKYVSEI 1036
            +EV Q   G F++ + Y  E+
Sbjct: 1074 IEVKQEENGIFITQEGYAKEV 1094



 Score =  201 bits (511), Expect(4) = 0.0
 Identities = 104/191 (54%), Positives = 128/191 (67%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            FSRKTW    + K   F   ++      +   +  K++RSDRGGE+ S EF  +C+ +GI
Sbjct: 564  FSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGI 623

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
            +RQ T   TPQQNGVAERKNRTIL M RS+L +  +PK+ W E V   VY+ NRSPT+SV
Sbjct: 624  RRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSV 683

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
            +  TP EAWSG KP VSHLRVFG IA+AHV DEKR KLDDK  K IF+GY   SK YK +
Sbjct: 684  LEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLY 743

Query: 2182 DPITEKIDQSR 2150
            +P T+K   SR
Sbjct: 744  NPETKKTIISR 754



 Score =  166 bits (421), Expect(4) = 0.0
 Identities = 77/143 (53%), Positives = 103/143 (72%)
 Frame = -3

Query: 735  LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCACQA 556
            L+G++DSD+ GD DDR+STSG+ F  G    +W SKKQ IV+LST EAEY+AA+SC C A
Sbjct: 1194 LVGYSDSDWGGDVDDRKSTSGFVFFIGETAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1253

Query: 555  VWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVNDGTVD 376
            +WLR LL E++ PQ+  T IF DN S I L+KNPVFH R+KHI   YH+IR+ V    V 
Sbjct: 1254 IWLRNLLKELNLPQEEPTKIFVDNRSAIALAKNPVFHDRSKHIDTRYHYIRECVTKMDVQ 1313

Query: 375  IQHCRSEDNLADIFTKPLKFAAF 307
            +++ ++ D +ADIFTK  K+ +F
Sbjct: 1314 LEYVKTNDQVADIFTK--KYPSF 1334



 Score =  106 bits (264), Expect(4) = 0.0
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF+ D  N V TP E G+KL K+ +G+ VD TL+K +VGSL YLT +RPDI + V ++
Sbjct: 1095 LKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDILHAVGVV 1154

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            SRYME PT  H   AKRILRY+KGT + G+++
Sbjct: 1155 SRYMEHPTTTHFKAAKRILRYIKGTINFGLYY 1186



 Score =  260 bits (664), Expect = 7e-66
 Identities = 130/250 (52%), Positives = 170/250 (68%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHMCG+KS F +LDE+  + V  GD S + VKG  +I  + KN   Q ISNV+Y+P +K
Sbjct: 350  SNHMCGNKSMFVELDESVKTDVALGDESRMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 409

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            +N+LS+GQLLEKGY++ LK+    + D    LIT+V M+ NRMF L ++ND+  C     
Sbjct: 410  TNILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNRMFVLNIQNDIARCLKMCY 469

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               SWLWHLR+GHLNF GL +L +++MVKGLP I+   Q+CEGC++GKQ + SFPKES+ 
Sbjct: 470  KEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESET 529

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLV-----AKLGVYFLNAKSEAFSVFKEFKVL 2644
            RA+K LEL+HTD+CGPI P S G   YF L       K  VYFL  KSE F  FK+FK  
Sbjct: 530  RARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAH 589

Query: 2643 VEKDAGCLIR 2614
            VEK++G  I+
Sbjct: 590  VEKESGLKIK 599



 Score =  260 bits (664), Expect = 7e-66
 Identities = 130/250 (52%), Positives = 170/250 (68%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHMCG+KS F +LDE+  + V  GD S + VKG  +I  + KN   Q ISNV+Y+P +K
Sbjct: 1689 SNHMCGNKSMFVELDESVKTDVALGDESRMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 1748

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            +N+LS+GQLLEKGY++ LK+    + D    LIT+V M+ NRMF L ++ND+  C     
Sbjct: 1749 TNILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNRMFVLNIQNDIARCLKMCY 1808

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               SWLWHLR+GHLNF GL +L +++MVKGLP I+   Q+CEGC++GKQ + SFPKES+ 
Sbjct: 1809 KEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESET 1868

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLV-----AKLGVYFLNAKSEAFSVFKEFKVL 2644
            RA+K LEL+HTD+CGPI P S G   YF L       K  VYFL  KSE F  FK+FK  
Sbjct: 1869 RARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAH 1928

Query: 2643 VEKDAGCLIR 2614
            VEK++G  I+
Sbjct: 1929 VEKESGLKIK 1938


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  316 bits (809), Expect(4) = 0.0
 Identities = 170/382 (44%), Positives = 238/382 (62%), Gaps = 4/382 (1%)
 Frame = -3

Query: 2169 KKLISRDIVFDETRFWNWKTN-DVDEFIPVEDDF-VGSTSPEIHTPVISPPSSPEPQHIA 1996
            K ++SRD+ F E   WNW+   D  +F P  ++    + +P   TP +SP  S      +
Sbjct: 432  KTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPALSPTPSTNEASSS 491

Query: 1995 TPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIH-- 1822
            +  + +E                       RPRR  N         +Q   D++  I+  
Sbjct: 492  SEGSSSE-----------------------RPRRMRN---------IQELYDETEVINDL 519

Query: 1821 LALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKY 1642
              LF  S P++F + ++D +W  AM+ EIKAI+K NTWEL+ LP GH+ IGVKWV+K K 
Sbjct: 520  FCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKK 579

Query: 1641 NSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKS 1462
            N+ G V+++K RL+ KGY Q+  VDYDEVF+PVAR +TI+LLI+LAAQ  W +FQ DVKS
Sbjct: 580  NAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKS 639

Query: 1461 AFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQK 1282
            AFLNG L+E VYV+QP G+V +G E KV +L KALYGLKQAPRAW + I  YF   GF  
Sbjct: 640  AFLNGYLEEDVYVEQPMGFVIEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVH 699

Query: 1281 SPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFL 1102
              +E  L+V+   +G+ L +CLYVDDLI+T N+  L+E+FK SM  EF+M+D+G++ Y+L
Sbjct: 700  CQNEYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYL 759

Query: 1101 GLEVVQSSGGTFLS*KKYVSEI 1036
            G+EV Q+  G F+S ++Y  E+
Sbjct: 760  GMEVKQTQNGIFVSQERYTKEV 781



 Score =  192 bits (489), Expect(4) = 0.0
 Identities = 100/191 (52%), Positives = 123/191 (64%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            +SRKTW    + K  +F   +       +      K LRSDRGGE+ S EF +FC+K GI
Sbjct: 247  YSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGI 306

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
            +R  T   +PQQNGVAERKNRTILNM R +L    +PK+FW E V   VY+ NRSPT++V
Sbjct: 307  RRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNV 366

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
             + TP EAWSG KPRV HLRVFG IAYAHV D+ R KLDD+  K +F+GY   SK YK +
Sbjct: 367  KDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLY 426

Query: 2182 DPITEKIDQSR 2150
            +P   K   SR
Sbjct: 427  NPNNGKTIVSR 437



 Score =  187 bits (474), Expect(4) = 0.0
 Identities = 89/161 (55%), Positives = 113/161 (70%)
 Frame = -3

Query: 762  FYTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            FY+      L+GF DSD+AGD DDR+ST+G+ F  G  V +W SKKQ IV+LST EAEY+
Sbjct: 872  FYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVFFMGDCVFTWSSKKQGIVTLSTCEAEYV 931

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            AA+SC C A+WLRRLL E+   Q  ST I+ DN S  +L+KNPVFH R+KHI   YHFIR
Sbjct: 932  AATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERSKHIDTRYHFIR 991

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            + +    V++ H +++D +ADIFTKPLKF  F  LR  LGV
Sbjct: 992  ECITKKEVELTHVKTQDQVADIFTKPLKFEDFRRLRARLGV 1032



 Score =  111 bits (277), Expect(4) = 0.0
 Identities = 54/92 (58%), Positives = 66/92 (71%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF    CN V TP E G+KL K  +G+KVDST++K +VGSL YLT +RPDI Y V ++
Sbjct: 782  LKKFNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVV 841

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
             R+MEAPT  HL  AKRIL YLKGT D G+F+
Sbjct: 842  CRFMEAPTSPHLKAAKRILCYLKGTIDFGLFY 873



 Score =  231 bits (590), Expect = 3e-57
 Identities = 117/246 (47%), Positives = 161/246 (65%), Gaps = 5/246 (2%)
 Frame = -3

Query: 3336 CGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLL 3157
            CG K  F +LD+     V FGD+S + ++G   I    K+   ++I++V+YVP LKSN+L
Sbjct: 37   CGCKEKFVELDKKVKGNVSFGDSSKVQIQGKGTILISLKDGAHKLITDVYYVPKLKSNIL 96

Query: 3156 SVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPS 2977
            S+GQL+EKGYE+ +K+    + D    LI +V M+RNRMF L ++ +   C  + + + S
Sbjct: 97   SLGQLVEKGYEIHMKDCCLWLRDKNSNLIAKVFMSRNRMFTLNIKTNEAKCLKASIKDES 156

Query: 2976 WLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKK 2797
            W WH+R+GHLNF  L  L +  MVKG+PQI+   QLCE C++GK  R SFPKE+  RAK+
Sbjct: 157  WCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCEACLLGKHARRSFPKEANSRAKE 216

Query: 2796 VLELVHTDICGPITPLSNGNKRYFNLV-----AKLGVYFLNAKSEAFSVFKEFKVLVEKD 2632
             L+LV+TD+CGPI P S GN +YF L       K  VYFL  KSEAF  FK FK LVEK+
Sbjct: 217  PLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKE 276

Query: 2631 AGCLIR 2614
            +G +I+
Sbjct: 277  SGYVIK 282


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  255 bits (651), Expect(5) = 0.0
 Identities = 150/403 (37%), Positives = 212/403 (52%), Gaps = 28/403 (6%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKT---NDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIA-- 1996
            +SRD+VF+E   W W +    +  +F   E+      SP     V+ P  +P P   A  
Sbjct: 749  VSRDVVFEENVPWEWTSAAGQEPTDFAMEEEPGEQLPSPATAAGVVPPYQAPSPGRRAGK 808

Query: 1995 ---------------------TPNAPTEQGXXXXXXXXXXXXXXXXSVATSR-PRRTINR 1882
                                  P  PT                   ++ T   PRR  + 
Sbjct: 809  EAVVAAEEVPSPASPVAASPTLPGTPTPGSPSTNSAGVVPSPGTDDNIDTDDGPRRYRSL 868

Query: 1881 PSWMEDYQLQVSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWEL 1702
               + +       +D       L    +P S+++    P W  AM  E++AI+K  TWEL
Sbjct: 869  ADVLREAPRVDLVEDECDGEALLAESEEPSSYREAAGQPAWEEAMQREMEAIEKNKTWEL 928

Query: 1701 ADLPYGHKPIGVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIK 1522
            A LP GH+ IG+KWVYK K N+ G + K+K RL+ KGY Q++ VD++EVF+PVAR DT++
Sbjct: 929  AMLPAGHRAIGLKWVYKLKKNTAGEIIKHKARLVAKGYVQKQGVDFEEVFAPVARLDTVR 988

Query: 1521 LLIALAAQNSWPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQ 1342
            +++A+AA   W V  LDVKSAFLNG+L+E VYV QP G+ R G E  V +L KALYGL+Q
Sbjct: 989  VVLAVAADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGFARSGKEHLVLKLHKALYGLRQ 1048

Query: 1341 APRAWYSRI*AYFIKMGFQKSPHEPTLFVQAK-PDGNFLVVCLYVDDLIYTDNDRLLYEE 1165
            APRAW  R+     ++GF +   E  ++ + +  DG  ++V +YVDDLI T  +    + 
Sbjct: 1049 APRAWNIRLDRSLRELGFDRCTQEQAVYTRGRGSDG--IIVGVYVDDLIVTGENPSELKV 1106

Query: 1164 FKASMMAEFEMSDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            FK  MM EFEMSDLG+L Y+LG+EV Q    T L    Y  ++
Sbjct: 1107 FKEQMMGEFEMSDLGLLTYYLGIEVDQDESATTLKQTAYAKKL 1149



 Score =  169 bits (427), Expect(5) = 0.0
 Identities = 80/156 (51%), Positives = 110/156 (70%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            KTLRSDRGGE+ S EFA  C++ GI+R  TA ++PQQNGV ER+NRT++ M RS+L    
Sbjct: 596  KTLRSDRGGEFLSGEFAQVCEEAGIQRHLTAPYSPQQNGVVERRNRTVMAMARSLLKGMR 655

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            VP +FW E V+  V++LNR PT+++ + TP EAW+G KP++ HL+VFGC A+A  T    
Sbjct: 656  VPGRFWGEAVRHAVHLLNRLPTKAMGDRTPFEAWTGRKPQLGHLKVFGCTAHAKNTQPHL 715

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            KKLDD+    ++LG  + SKA++ FDP   +I  SR
Sbjct: 716  KKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSR 751



 Score =  162 bits (411), Expect(5) = 0.0
 Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
 Frame = -3

Query: 759  YTKGTKPI-LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            Y  GT  + + G+TDSD AGD DDRRST G AF     +++W S+KQ+ V+LS+ EAE++
Sbjct: 1241 YAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFM 1300

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            AA++ ACQA+WLR LLAEV   ++ +  +F DN S I L KNPVFHGR+KHI   YHFIR
Sbjct: 1301 AATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKNPVFHGRSKHIDTRYHFIR 1360

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGVCSFTEQAN 256
            + V+ G + ++  R+E+  AD  TK L  A     R LLGV S   + N
Sbjct: 1361 ECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTARHLLGVRSLGSRQN 1409



 Score =  135 bits (340), Expect(5) = 0.0
 Identities = 83/246 (33%), Positives = 120/246 (48%), Gaps = 5/246 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHM GD+S F +LDE+    VKFGD ST+ +KG   I F  KN+ Q ++ +V+Y+P L+
Sbjct: 370  SNHMTGDRSKFRELDESITGRVKFGDASTVQIKGKGSILFSCKNDDQWLLQDVYYIPSLQ 429

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++S+GQL E G+ + +   V  + D     +         M P               
Sbjct: 430  CNMVSLGQLTETGHRVVMDEDVLEVFDKSPWRLV--------MKP--------------- 466

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
              P        G   F        +    G+P I    QLC+ C+V KQ R  FP  + +
Sbjct: 467  RRPGLAVACAAGTRKFSSNETAGGQGDGGGVPAIVHPNQLCQSCLVAKQARAPFPAAAHF 526

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            RA++ LEL+H D+CGPITP +    RYF L+       + V+ L  K ++   F +FK L
Sbjct: 527  RAEEPLELLHIDLCGPITPNTMSGNRYFFLIVDDYSRWIWVFVLKTKDQSLDAFVKFKPL 586

Query: 2643 VEKDAG 2626
             E  AG
Sbjct: 587  AENTAG 592



 Score = 98.6 bits (244), Expect(5) = 0.0
 Identities = 46/94 (48%), Positives = 63/94 (67%)
 Frame = -1

Query: 1040 KYLCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVS 861
            K L +F    CNSV  P +   +L KDP+G  VD+T Y++I+GSL YL  +RPD++Y V 
Sbjct: 1148 KLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVG 1207

Query: 860  LISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            + SR+ME PT MH    K+ILRY+KGT D G+ +
Sbjct: 1208 VASRFMERPTVMHFKAVKQILRYIKGTMDYGLVY 1241


>gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1094

 Score =  386 bits (992), Expect(3) = 0.0
 Identities = 249/657 (37%), Positives = 348/657 (52%), Gaps = 30/657 (4%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTNDVDEFIPVEDDFV--------GSTSPEI---HTPVISPPSSP 2014
            +SRD+VFDE   W W+  +V +    ED  V        G+  P++   H       ++P
Sbjct: 456  VSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFSTPLGGNRVPDVVVEHGGARETETAP 515

Query: 2013 EPQHIATPNA-----PTEQGXXXXXXXXXXXXXXXXSVATSRPR-RTINRPSWMEDYQLQ 1852
             P  +ATP+A     P                        + PR RT+N         L 
Sbjct: 516  SP--LATPDAAPVWSPVTSSSPAGVEFCTPPSDASIESDGAPPRFRTVNNVLATTTPVLD 573

Query: 1851 VSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPI 1672
               DD       L A  +P SFK+  ++  W+ AM+ E+ +I+  NTW L DLP  H+ I
Sbjct: 574  FDYDDE-----CLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAI 628

Query: 1671 GVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNS 1492
            G+KWVYK K +++G + KYK RL+ KGY Q++ +DY+EVF+PVAR +T++LL+ALAA   
Sbjct: 629  GLKWVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVALAAHEG 688

Query: 1491 WPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI* 1312
            W +  +DVKSAFLNG+L+E VYV QPPG+V +  E KV +L+KALYGLKQAPRAWY+++ 
Sbjct: 689  WQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRAWYAKLD 748

Query: 1311 AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEM 1132
            +    + F +S  E  ++ + + +   LVV +YVDDLI T        +FK  M + F M
Sbjct: 749  STLANLDFVRSATENAVYTRGEGNAR-LVVGVYVDDLIITGALGTEIAKFKEQMRSMFSM 807

Query: 1131 SDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEIFV*ISNGYLQFCSNTC*GWNEVGERSSR 952
            SDLG+L Y+LG+EV Q+  G  +S   Y   I   +    +Q C N C     +  R   
Sbjct: 808  SDLGLLSYYLGMEVKQTEEGITMSQAGYAGRI---LEKAGMQGC-NPC--QVPMDARLKL 861

Query: 951  KKGG*YIV*EDCG*SDVLNNFSTGYNV*C*SHQSVYGSSN*NASECREENPPLFKRYS*P 772
            KKG      EDC  +    +          +   +  S +        ENP      +  
Sbjct: 862  KKGV-----EDCIDATQFRSIIGSLRYLVNTRPDL--SYSVGYVSRYMENPGAEHWAAMK 914

Query: 771  WYFFYTKGTKPILLGF-------------TDSDYAGDPDDRRSTSGYAFMFGSGVISWCS 631
                Y  G+  I L F             +DSD AGD DDR+ST+G  F  G  +I+W S
Sbjct: 915  HILRYVAGSLNIGLKFRKGEEKFPRLVGYSDSDMAGDVDDRKSTTGVLFKLGENLITWQS 974

Query: 630  KKQQIVSLSTTEAEYIAASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPV 451
            +KQ+IV+LS+ EAEYIAA++ ACQ +WL RLL E+   +     +  DN S I L KNPV
Sbjct: 975  QKQKIVALSSCEAEYIAATTAACQGIWLARLLGELQMKKPCCAMLKVDNKSAINLCKNPV 1034

Query: 450  FHGRTKHIGVHYHFIRDLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
             H R+KHI   YHFIR+ V    V++++  S + LADI TKPL    F  LR  LG+
Sbjct: 1035 LHDRSKHIDTRYHFIRERVERKEVEVEYTSSAEQLADILTKPLGKVRFLELRGKLGL 1091



 Score =  200 bits (508), Expect(3) = 0.0
 Identities = 98/250 (39%), Positives = 155/250 (62%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G +S F+DLD   + TVKFGD S + ++G   + FQ KN   + +  V+++P L 
Sbjct: 54   TNHMTGSRSAFADLDTGVVGTVKFGDGSVVDIRGRGTVLFQCKNGDHRSLEAVYFIPKLC 113

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++S+G+L  +GY+  + +GVC + DP   L+ +V+ + + ++ L L      C ++  
Sbjct: 114  KNIISIGRLDARGYDAHIYHGVCTLRDPDGLLLAKVKRSPSFLYILKLNMARPICLAANG 173

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               +W WH R+GHLNF+ L  L Q +MV+GLP ID  +QLC+GC+ GKQ R  FP ++++
Sbjct: 174  TETAWRWHARFGHLNFQALRRLAQAEMVRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARF 233

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            RA+  LELVH D+CGPI P + G ++YF L+       + +  L+ K EA +  K+FK  
Sbjct: 234  RAQDALELVHGDLCGPIAPATPGGRKYFLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAG 293

Query: 2643 VEKDAGCLIR 2614
            VE ++G  +R
Sbjct: 294  VEMESGRKLR 303



 Score =  173 bits (439), Expect(3) = 0.0
 Identities = 76/156 (48%), Positives = 107/156 (68%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            + LR+DRGGE+ S EF +FC   G+ RQ TA ++PQQNGV ER+N T++   RS+L  +G
Sbjct: 303  RALRTDRGGEFTSVEFTEFCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAG 362

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P +FW E V   VY+LNRSPT+S+  +TP EAW G +P V HL+VFGC+ Y        
Sbjct: 363  MPAQFWGEAVVAAVYLLNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNL 422

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLDD+G + +F+GY   SKAY+ +DP++ +   SR
Sbjct: 423  RKLDDRGTRMVFIGYEQGSKAYRMYDPVSRRFYVSR 458


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  315 bits (808), Expect(4) = 0.0
 Identities = 173/379 (45%), Positives = 234/379 (61%), Gaps = 5/379 (1%)
 Frame = -3

Query: 2157 SRDIVFDETRFWNWKTNDVDEFIP--VEDDFVGSTSPE---IHTPVISPPSSPEPQHIAT 1993
            SR++ FDE   W W+  D  E +   V D+   + SP     +TP  S PSSP P +   
Sbjct: 557  SRNVTFDEEAVWTWREGDNGELVEIFVNDEQEENPSPANSATNTPASSAPSSPGPNN--- 613

Query: 1992 PNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQIHLAL 1813
             N  ++                  S + S P++     S  E Y+ Q +           
Sbjct: 614  GNGSSD---------------GEGSSSISPPQKF---RSLREIYEEQHA----------- 644

Query: 1812 FAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYNSD 1633
            F  +DPV+  +     +W  AM+ EI +I+K  TW+L +LP     IGVKWV+KTKY +D
Sbjct: 645  FFSADPVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQAD 704

Query: 1632 GMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSAFL 1453
              + KYK RL+VKGYAQE  VDY++ FSPVAR DT++ L+AL A   WP++Q DVKSAFL
Sbjct: 705  DNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFL 764

Query: 1452 NGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKSPH 1273
            NG+L+E VYVDQP G++ +G E  VYRL KALYGLKQAPRAWY++I +YF + GF++S  
Sbjct: 765  NGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKS 824

Query: 1272 EPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLGLE 1093
            EPTL+++ +  G+ LVVCLYVDD+IY  +   L  EFKASMM +FEM+DLG+L++FLGLE
Sbjct: 825  EPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLE 884

Query: 1092 VVQSSGGTFLS*KKYVSEI 1036
            V Q   G F+S  KY  ++
Sbjct: 885  VKQVEDGVFVSQHKYACDL 903



 Score =  190 bits (483), Expect(4) = 0.0
 Identities = 87/164 (53%), Positives = 120/164 (73%)
 Frame = -3

Query: 762  FYTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            +Y   +K  L+GFTDSD+AG   DR+STSG+ F  GSG + W SKKQ + +LS++EAEY 
Sbjct: 994  WYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYT 1053

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            AA++ ACQAVWLRR+LA++   Q+ +TTIFCDN +TI ++KNP +HGRTKHI +  HFIR
Sbjct: 1054 AATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIR 1113

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGVCSF 271
            DLV++G+V +++C + +  AD+ TK L    F+  R  LGVC F
Sbjct: 1114 DLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSKLGVCKF 1157



 Score =  187 bits (476), Expect(4) = 0.0
 Identities = 90/191 (47%), Positives = 125/191 (65%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            +SR +W    + K  +F   +       ++     K LR+DRGGE+ S +F  FC+K+GI
Sbjct: 368  YSRMSWVYFLKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGI 427

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
              + T A+TP+QNGVAERKN T++ M RS+L    +P +FW E V+  VY+LN SPT++V
Sbjct: 428  HHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYLLNISPTKAV 487

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
            +N TP EAW G KP VSHLRVFG + Y+ +    RKKLD+K  KCIFLGY   SK Y+ +
Sbjct: 488  LNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLDEKSEKCIFLGYCSQSKGYRLY 547

Query: 2182 DPITEKIDQSR 2150
            +P++ KI +SR
Sbjct: 548  NPVSGKIVESR 558



 Score = 86.3 bits (212), Expect(4) = 0.0
 Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
 Frame = -1

Query: 1040 KYLC----KFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDIT 873
            KY C    +F    CN+V TP  V  KL      +K D+T ++ +VG L+YLT +RPDI 
Sbjct: 898  KYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDIC 957

Query: 872  YDVSLISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            + VS ISR+M  PT+ H   AKR+LRY+  T + G+++
Sbjct: 958  FAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWY 995



 Score =  179 bits (455), Expect = 1e-41
 Identities = 102/246 (41%), Positives = 145/246 (58%), Gaps = 6/246 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHM G KS F +LDE+    VK G++  + V+G   +     +   ++I  V+Y+P L 
Sbjct: 154  SNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLA 213

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGL-ITQVQMTRNRMFPLFLRNDVLPCFSSI 2992
             NLLSVGQ++E    +      C I++ K G+ +  V+ T N ++PL + +       + 
Sbjct: 214  HNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAK 273

Query: 2991 VNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESK 2812
            V++ S L HLRYGHL+  GL +L Q+DMV GLP+I    +LCEGCV GKQ+R SFP    
Sbjct: 274  VSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPKIGAL-KLCEGCVYGKQSRRSFPVGRA 332

Query: 2811 WRAKKVLELVHTDICGPITPLSNGNKRYFNLVA-----KLGVYFLNAKSEAFSVFKEFKV 2647
             RA + LE+VH D+CGP+   S G  +YF ++         VYFL +K EAF +FK FK 
Sbjct: 333  RRATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAFDMFKNFKA 392

Query: 2646 LVEKDA 2629
            LVEK +
Sbjct: 393  LVEKQS 398


>ref|NP_001059837.1| Os07g0528100, partial [Oryza sativa Japonica Group]
            gi|113611373|dbj|BAF21751.1| Os07g0528100, partial [Oryza
            sativa Japonica Group]
          Length = 1187

 Score =  382 bits (981), Expect(3) = 0.0
 Identities = 247/657 (37%), Positives = 348/657 (52%), Gaps = 30/657 (4%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTNDVDEFIPVEDDFV--------GSTSPEI---HTPVISPPSSP 2014
            +SRD+VFDE   W W+  +V +    ED  V        G+  P++   H       ++P
Sbjct: 549  VSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFSTPLGGNRVPDVVVEHGGARETETAP 608

Query: 2013 EPQHIATPNA-----PTEQGXXXXXXXXXXXXXXXXSVATSRPR-RTINRPSWMEDYQLQ 1852
             P  +ATP+A     P                        + PR RT+N         L 
Sbjct: 609  SP--LATPDAAPVWSPVTSSSPAGVEFCTPPSDASIESDGAPPRFRTVNNVLATTTPVLD 666

Query: 1851 VSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPI 1672
               +D       L A  +P SFK+  ++  W+ AM+ E+ +I+  NTW L DLP  H+ I
Sbjct: 667  FDYNDE-----CLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAI 721

Query: 1671 GVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNS 1492
            G+KWVYK K +++G + KYK RL+ KGY Q++ +DY+EVF+PVAR +T++LL+ALAA   
Sbjct: 722  GLKWVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVALAAHEG 781

Query: 1491 WPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI* 1312
            W +  +DVKSAFLNG+L+E VYV QPPG+V +  E KV +L+KALYGLKQAPRAWY+++ 
Sbjct: 782  WQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRAWYAKLD 841

Query: 1311 AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEM 1132
            +    + F +S  E  ++ + + +   LVV +YVDDLI T        +FK  M + F M
Sbjct: 842  STLANLDFVRSATENAVYTRGEGNAR-LVVGVYVDDLIITGALGTEIAKFKEQMRSMFSM 900

Query: 1131 SDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEIFV*ISNGYLQFCSNTC*GWNEVGERSSR 952
            S+LG+L Y+LG+EV Q+  G  +S   Y   I   +    +Q C N C     +  R   
Sbjct: 901  SNLGLLSYYLGMEVKQTEEGITMSQAGYAGRI---LEKAGMQGC-NPC--QVPMDARLKL 954

Query: 951  KKGG*YIV*EDCG*SDVLNNFSTGYNV*C*SHQSVYGSSN*NASECREENPPLFKRYS*P 772
            KKG      EDC  +    +          +   +  S +        ENP      +  
Sbjct: 955  KKGV-----EDCIDATQFRSIIGSLRYLVNTRPDL--SYSVGYVSRYMENPGAEHWAAMK 1007

Query: 771  WYFFYTKGTKPILLGF-------------TDSDYAGDPDDRRSTSGYAFMFGSGVISWCS 631
                Y  G+  I L F             +DSD AGD DDR+ST+G  F  G  +I+W S
Sbjct: 1008 HILRYVAGSLNIGLKFRKGEEKFPRLVGYSDSDMAGDVDDRKSTTGVLFKLGENLITWQS 1067

Query: 630  KKQQIVSLSTTEAEYIAASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPV 451
            +KQ+IV+LS+ EAEYIAA++ ACQ +WL RLL E+   +   T +  DN S I L KNPV
Sbjct: 1068 QKQKIVALSSCEAEYIAATTAACQGIWLARLLGELQMKKPCCTMLKVDNKSAINLCKNPV 1127

Query: 450  FHGRTKHIGVHYHFIRDLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
             H R+KHI   YHFIR+ V    V++++  S + LADI  KPL    F  LR  LG+
Sbjct: 1128 LHDRSKHIDTRYHFIRERVERKEVEVEYTSSAEQLADILIKPLGKVRFLELRGKLGL 1184



 Score =  200 bits (508), Expect(3) = 0.0
 Identities = 98/250 (39%), Positives = 155/250 (62%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G +S F+DLD   + TVKFGD S + ++G   + FQ KN   + +  V+++P L 
Sbjct: 147  TNHMTGSRSAFADLDTGVVGTVKFGDGSVVDIRGRGTVLFQCKNGDHRSLEAVYFIPKLC 206

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++S+G+L  +GY+  + +GVC + DP   L+ +V+ + + ++ L L      C ++  
Sbjct: 207  KNIISIGRLDARGYDAHIYHGVCTLRDPDGLLLAKVKRSPSFLYILKLNMARPICLAANG 266

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               +W WH R+GHLNF+ L  L Q +MV+GLP ID  +QLC+GC+ GKQ R  FP ++++
Sbjct: 267  TETAWRWHARFGHLNFQALRRLAQAEMVRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARF 326

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            RA+  LELVH D+CGPI P + G ++YF L+       + +  L+ K EA +  K+FK  
Sbjct: 327  RAQDALELVHGDLCGPIAPATPGGRKYFLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAG 386

Query: 2643 VEKDAGCLIR 2614
            VE ++G  +R
Sbjct: 387  VEMESGRKLR 396



 Score =  173 bits (438), Expect(3) = 0.0
 Identities = 75/156 (48%), Positives = 107/156 (68%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            + LR+DRGGE+ S EF +FC   G+ RQ TA ++PQQNGV ER+N T++   RS+L  +G
Sbjct: 396  RALRTDRGGEFTSVEFTEFCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAG 455

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P +FW E V   VY+ NRSPT+S+  +TP EAW G +P V HL+VFGC+ Y        
Sbjct: 456  MPAQFWGEAVMAAVYLWNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNL 515

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLDD+G + +F+GY   SKAY+ +DP++ ++  SR
Sbjct: 516  RKLDDRGTRMVFIGYEQGSKAYRMYDPVSRRVYVSR 551


>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score =  382 bits (981), Expect(3) = 0.0
 Identities = 247/657 (37%), Positives = 348/657 (52%), Gaps = 30/657 (4%)
 Frame = -3

Query: 2160 ISRDIVFDETRFWNWKTNDVDEFIPVEDDFV--------GSTSPEI---HTPVISPPSSP 2014
            +SRD+VFDE   W W+  +V +    ED  V        G+  P++   H       ++P
Sbjct: 456  VSRDVVFDEAAMWPWRDPEVTQTGGEEDFTVEFFSTPLGGNRVPDVVVEHGGARETETAP 515

Query: 2013 EPQHIATPNA-----PTEQGXXXXXXXXXXXXXXXXSVATSRPR-RTINRPSWMEDYQLQ 1852
             P  +ATP+A     P                        + PR RT+N         L 
Sbjct: 516  SP--LATPDAAPVWSPVTSSSPAGVEFCTPPSDASIESDGAPPRFRTVNNVLATTTPVLD 573

Query: 1851 VSGDDSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPI 1672
               +D       L A  +P SFK+  ++  W+ AM+ E+ +I+  NTW L DLP  H+ I
Sbjct: 574  FDYNDE-----CLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNNTWFLCDLPSDHRAI 628

Query: 1671 GVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNS 1492
            G+KWVYK K +++G + KYK RL+ KGY Q++ +DY+EVF+PVAR +T++LL+ALAA   
Sbjct: 629  GLKWVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARMETVRLLVALAAHEG 688

Query: 1491 WPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI* 1312
            W +  +DVKSAFLNG+L+E VYV QPPG+V +  E KV +L+KALYGLKQAPRAWY+++ 
Sbjct: 689  WQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRAWYAKLD 748

Query: 1311 AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEM 1132
            +    + F +S  E  ++ + + +   LVV +YVDDLI T        +FK  M + F M
Sbjct: 749  STLANLDFVRSATENAVYTRGEGNAR-LVVGVYVDDLIITGALGTEIAKFKEQMRSMFSM 807

Query: 1131 SDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEIFV*ISNGYLQFCSNTC*GWNEVGERSSR 952
            S+LG+L Y+LG+EV Q+  G  +S   Y   I   +    +Q C N C     +  R   
Sbjct: 808  SNLGLLSYYLGMEVKQTEEGITMSQAGYAGRI---LEKAGMQGC-NPC--QVPMDARLKL 861

Query: 951  KKGG*YIV*EDCG*SDVLNNFSTGYNV*C*SHQSVYGSSN*NASECREENPPLFKRYS*P 772
            KKG      EDC  +    +          +   +  S +        ENP      +  
Sbjct: 862  KKGV-----EDCIDATQFRSIIGSLRYLVNTRPDL--SYSVGYVSRYMENPGAEHWAAMK 914

Query: 771  WYFFYTKGTKPILLGF-------------TDSDYAGDPDDRRSTSGYAFMFGSGVISWCS 631
                Y  G+  I L F             +DSD AGD DDR+ST+G  F  G  +I+W S
Sbjct: 915  HILRYVAGSLNIGLKFRKGEEKFPRLVGYSDSDMAGDVDDRKSTTGVLFKLGENLITWQS 974

Query: 630  KKQQIVSLSTTEAEYIAASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPV 451
            +KQ+IV+LS+ EAEYIAA++ ACQ +WL RLL E+   +   T +  DN S I L KNPV
Sbjct: 975  QKQKIVALSSCEAEYIAATTAACQGIWLARLLGELQMKKPCCTMLKVDNKSAINLCKNPV 1034

Query: 450  FHGRTKHIGVHYHFIRDLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
             H R+KHI   YHFIR+ V    V++++  S + LADI  KPL    F  LR  LG+
Sbjct: 1035 LHDRSKHIDTRYHFIRERVERKEVEVEYTSSAEQLADILIKPLGKVRFLELRGKLGL 1091



 Score =  200 bits (508), Expect(3) = 0.0
 Identities = 98/250 (39%), Positives = 155/250 (62%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G +S F+DLD   + TVKFGD S + ++G   + FQ KN   + +  V+++P L 
Sbjct: 54   TNHMTGSRSAFADLDTGVVGTVKFGDGSVVDIRGRGTVLFQCKNGDHRSLEAVYFIPKLC 113

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
             N++S+G+L  +GY+  + +GVC + DP   L+ +V+ + + ++ L L      C ++  
Sbjct: 114  KNIISIGRLDARGYDAHIYHGVCTLRDPDGLLLAKVKRSPSFLYILKLNMARPICLAANG 173

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               +W WH R+GHLNF+ L  L Q +MV+GLP ID  +QLC+GC+ GKQ R  FP ++++
Sbjct: 174  TETAWRWHARFGHLNFQALRRLAQAEMVRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARF 233

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYFNLVAK-----LGVYFLNAKSEAFSVFKEFKVL 2644
            RA+  LELVH D+CGPI P + G ++YF L+       + +  L+ K EA +  K+FK  
Sbjct: 234  RAQDALELVHGDLCGPIAPATPGGRKYFLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAG 293

Query: 2643 VEKDAGCLIR 2614
            VE ++G  +R
Sbjct: 294  VEMESGRKLR 303



 Score =  173 bits (438), Expect(3) = 0.0
 Identities = 75/156 (48%), Positives = 107/156 (68%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            + LR+DRGGE+ S EF +FC   G+ RQ TA ++PQQNGV ER+N T++   RS+L  +G
Sbjct: 303  RALRTDRGGEFTSVEFTEFCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAG 362

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +P +FW E V   VY+ NRSPT+S+  +TP EAW G +P V HL+VFGC+ Y        
Sbjct: 363  MPAQFWGEAVMAAVYLWNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNL 422

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
            +KLDD+G + +F+GY   SKAY+ +DP++ ++  SR
Sbjct: 423  RKLDDRGTRMVFIGYEQGSKAYRMYDPVSRRVYVSR 458


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  305 bits (781), Expect(4) = 0.0
 Identities = 168/394 (42%), Positives = 233/394 (59%), Gaps = 16/394 (4%)
 Frame = -3

Query: 2169 KKLISRDIVFDETRFWNW-------KTNDVDEF---IPVEDDFVGSTSPEIHTPVISPPS 2020
            K +ISRD++FDE   WNW       KT  VDE     PVE    G+ S    +P  SP S
Sbjct: 806  KLIISRDVIFDEKVAWNWEEGKILKKTILVDELQTKAPVE---TGNGSTSTSSPQESPRS 862

Query: 2019 SPEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGD 1840
             P    I +P + +                      +S PR+  +     E   L +   
Sbjct: 863  VPLSPSIESPTSXSSS-------------------PSSTPRKMRSLTDVYERCNLCIV-- 901

Query: 1839 DSSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKW 1660
                         +P SF++ ++D  W  AM+ EI  I+K  TW+L + P   + IGVKW
Sbjct: 902  -------------EPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGVKW 948

Query: 1659 VYKTK------YNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQ 1498
            +++ K      Y+SDG V + K RL+ KGY+Q+   D+ E F+PVAR DTI+ +IA+AAQ
Sbjct: 949  IFRVKWIFRXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQ 1008

Query: 1497 NSWPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSR 1318
              W ++QLD+KSAFLNG L+  +YV+QP G+V  G E KVY+L+KALYGLKQAPRAWY++
Sbjct: 1009 KGWLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQ 1068

Query: 1317 I*AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEF 1138
            I +YFI+ GF +S  EPTL+V++K +   L+V LYVDDLI+T ND  + E+F+  MM ++
Sbjct: 1069 IDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKY 1128

Query: 1137 EMSDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            EMSD+G+LHYFLG+EV Q   G F+  K+YV  I
Sbjct: 1129 EMSDMGLLHYFLGIEVYQEEDGVFICQKRYVEHI 1162



 Score =  194 bits (494), Expect(4) = 0.0
 Identities = 91/191 (47%), Positives = 128/191 (67%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            F+R TW    + K   F   ++      ++     KTLRSDRG EY S++F +FC+ +G+
Sbjct: 621  FTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEYTSSQFGNFCEDEGV 680

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
            +RQ T A+TPQQNGV ERKN+T++ M +++LY  G+PK FW E V   VY+LNR PT+++
Sbjct: 681  ERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKIFWAEAVNTAVYLLNRCPTKAL 740

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
            +N TPIEAWSG KP V H +VFGC+ Y+ V  ++R KLD+   KCIF+GYS  SK Y+ +
Sbjct: 741  LNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCIFMGYSSQSKGYRLY 800

Query: 2182 DPITEKIDQSR 2150
            +  T K+  SR
Sbjct: 801  NLKTXKLIISR 811



 Score =  173 bits (439), Expect(4) = 0.0
 Identities = 83/160 (51%), Positives = 111/160 (69%)
 Frame = -3

Query: 759  YTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIA 580
            Y +  +  L+G  DSD+ G  DD +STSGYAF  GSGVISW SKKQ  V+ S+ EAEYI+
Sbjct: 1254 YFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISWVSKKQGSVAQSSAEAEYIS 1313

Query: 579  ASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRD 400
            AS    QA+WLRR+L ++   Q+ +T + CDN S I ++KN VFH RT+HI V YHFI++
Sbjct: 1314 ASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIAIAKNXVFHSRTRHIAVKYHFIKE 1373

Query: 399  LVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            +++DG V + +C+SE+  ADIFTK L      + RKLLGV
Sbjct: 1374 VISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFRKLLGV 1413



 Score =  100 bits (249), Expect(4) = 0.0
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF    CN V TP  V  KL K+  GK VD T ++ +VG+L+YLT +RPDI +  SL+
Sbjct: 1163 LKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDETHFRSLVGNLLYLTATRPDIMFAASLL 1222

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFFIRKV 747
            SR+M  P+ +HL  AKR+LRYL+GT +LGI + R +
Sbjct: 1223 SRFMHYPSHLHLGAAKRVLRYLQGTVELGIKYFRNI 1258



 Score =  184 bits (467), Expect = 5e-43
 Identities = 105/252 (41%), Positives = 140/252 (55%), Gaps = 7/252 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM G+K+ F D+D T  S VK G+   + VKG   +  Q K  T+  I +V  VP L+
Sbjct: 427  TNHMTGNKNIFLDMDTTINSQVKMGNGDLVNVKGKGTVGIQXKVGTKY-IRDVLLVPALE 485

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDP--KRGLITQVQMTRNRMFPLFLRNDVLPCFSS 2995
              LLSVGQL+E GY+L  +N  C I D   +R L+ +++M +NR FP+  +         
Sbjct: 486  QXLLSVGQLVEHGYKLHFENNECTIYDKEQRRNLVKKIKMEKNRSFPIVFKYVENVALRM 545

Query: 2994 IVNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKES 2815
                 +WLWH R+GHLNF  L +L QR M                      +R SFPK  
Sbjct: 546  EDVEEAWLWHRRFGHLNFNSLKMLCQRKM---------------------HHRQSFPKGV 584

Query: 2814 KWRAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFK 2650
             WRAKKVLELVHTDICGP++  S GN +YF     +      V+F+  KSE FS+FK+FK
Sbjct: 585  AWRAKKVLELVHTDICGPMSTPSQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFK 644

Query: 2649 VLVEKDAGCLIR 2614
              VEK +GC I+
Sbjct: 645  SFVEKQSGCYIK 656


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  343 bits (879), Expect(4) = 0.0
 Identities = 175/379 (46%), Positives = 242/379 (63%), Gaps = 5/379 (1%)
 Frame = -3

Query: 2157 SRDIVFDETRFWNWKTNDVDE-FIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATPNAP 1981
            SRDIVF+E R W W T+  ++  + +E         E +    +  ++ E    A  N  
Sbjct: 629  SRDIVFEENRQWEWDTSYEEQVLVDLEWGDDDKNDTEDNEGDENLEAASEGNEEAEGNEN 688

Query: 1980 TEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQ----IHLAL 1813
                                  + +  R+    P WMEDY   +SG   S+    +++AL
Sbjct: 689  QAAANDAGDATATDASDAPAEGSDAMERKVRRAPIWMEDY---ISGKGLSEGEIELNMAL 745

Query: 1812 FAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYNSD 1633
             A +DP+++++VV   KW +AMD+EI +I+K  TW+L DLP G K IGVKW+YKTK N  
Sbjct: 746  VASTDPINYEEVVMSSKWRLAMDSEINSIEKNQTWKLTDLPTGAKTIGVKWIYKTKLNEL 805

Query: 1632 GMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSAFL 1453
            G VDKYK RL+ KGY+Q++ VD+ ++++PVAR DT+++++AL AQ  W ++QLDVKSAFL
Sbjct: 806  GEVDKYKARLVAKGYSQQQGVDFTKIYAPVARMDTVRMIVALTAQRGWTIYQLDVKSAFL 865

Query: 1452 NGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKSPH 1273
            NG+L E VYVDQP GY +KGSE KVY+L KALYGLKQAPRAW+SRI AYFI  GFQK P+
Sbjct: 866  NGELNEDVYVDQPKGYEKKGSEHKVYKLHKALYGLKQAPRAWFSRIEAYFISEGFQKCPN 925

Query: 1272 EPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLGLE 1093
            E TLF +    G  L+V +Y+D+LIYT ND  +   FK SMM  F+M+DLG + +FLG+E
Sbjct: 926  EQTLFTKRSSAGKILIVSIYMDNLIYTSNDEDMISGFKNSMMKVFDMTDLGRMRFFLGIE 985

Query: 1092 VVQSSGGTFLS*KKYVSEI 1036
            V+Q S G F+   +Y +E+
Sbjct: 986  VLQKSNGIFICQMRYATEV 1004



 Score =  201 bits (512), Expect(4) = 0.0
 Identities = 92/151 (60%), Positives = 118/151 (78%)
 Frame = -3

Query: 759  YTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIA 580
            Y KG +  LL FTDSDYAGD DDR+STSGY F+  SGVISW SKKQ IV+L TT+ E++A
Sbjct: 1096 YKKGREEELLVFTDSDYAGDIDDRKSTSGYVFLLSSGVISWLSKKQPIVTLLTTKVEFVA 1155

Query: 579  ASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRD 400
            A++CACQA+W++R+L ++   Q G TTI CDNSSTIKLS+N V HGR+KHI V +HF+RD
Sbjct: 1156 ATACACQAIWMKRVLKKLSHEQKGCTTIMCDNSSTIKLSRNQVMHGRSKHIDVRFHFLRD 1215

Query: 399  LVNDGTVDIQHCRSEDNLADIFTKPLKFAAF 307
            L  DG V++ HC +++ +AD+ TKPLK  AF
Sbjct: 1216 LTKDGVVELIHCGTQEQVADLMTKPLKLEAF 1246



 Score =  131 bits (330), Expect(4) = 0.0
 Identities = 58/117 (49%), Positives = 79/117 (67%)
 Frame = -2

Query: 2500 VAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKP 2321
            + E++    +  +R+      +PK FWPE V WT+YVLNRSP  +V N+TP EAWSG KP
Sbjct: 514  LVEKETGMYIKCLRTDRGEKKIPKTFWPEAVNWTMYVLNRSPIVAVKNVTPEEAWSGVKP 573

Query: 2320 RVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
             V H RVF C+A+ HV D KR KLD+K ++C+ LG+SD SK YK +DP+ + +  SR
Sbjct: 574  TVEHFRVFECVAHVHVPDAKRTKLDNKSLECVLLGFSDESKGYKLYDPVAKNVVTSR 630



 Score = 97.8 bits (242), Expect(4) = 0.0
 Identities = 47/81 (58%), Positives = 60/81 (74%)
 Frame = -1

Query: 1001 VRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLISRYMEAPTEMH 822
            V +P   G K+ +D  G  V+ T +K++VGSLMYLT +RPDI ++VSLISRYM  PTE+H
Sbjct: 1016 VSSPIVPGFKMSRDDDGVAVNMTNFKQMVGSLMYLTATRPDIMFNVSLISRYMAKPTELH 1075

Query: 821  LNVAKRILRYLKGTPDLGIFF 759
            L V KRILRYLKGT + GI +
Sbjct: 1076 LQVTKRILRYLKGTTNYGILY 1096



 Score =  189 bits (479), Expect = 2e-44
 Identities = 108/250 (43%), Positives = 140/250 (56%), Gaps = 5/250 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            SNHMCGD   FS+LDE+F   VK G+NS I VKG  +++ Q  N    V++ VFYVP LK
Sbjct: 306  SNHMCGDARMFSELDESFRQQVKLGNNSKITVKGRGNVRLQL-NGFNYVLTVVFYVPELK 364

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            +NLLS+GQL EKG  + + +G+C+I  P +GLI Q  M+ NRMF L              
Sbjct: 365  NNLLSIGQLQEKGLAIMIHDGLCKIYHPNKGLIIQTAMSTNRMFTLLANKQE-------- 416

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
                                     +MV GLP +     +C  C+ GKQ+RD  PK+S W
Sbjct: 417  ----------------------KNENMVHGLPHLLPTTLVCTDCLNGKQHRDPIPKKSAW 454

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFKVL 2644
            RA K L+L+H +ICGP+TP SNG KRY      +   K  VYFL  KS+A + FK FK L
Sbjct: 455  RATKKLQLIHANICGPVTPTSNGKKRYALCFIDDFSRKTWVYFLVEKSKALNSFKCFKRL 514

Query: 2643 VEKDAGCLIR 2614
            VEK+ G  I+
Sbjct: 515  VEKETGMYIK 524


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  282 bits (722), Expect(4) = 0.0
 Identities = 156/384 (40%), Positives = 219/384 (57%), Gaps = 5/384 (1%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTNDVDE-----FIPVEDDFVGSTSPEIHTPVISPPSSPEP 2008
            +K +I+RD++F E   WNW  +DVDE      + + ++ V     +     +   SS   
Sbjct: 700  RKIIINRDVIFSEDESWNWN-DDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTS 758

Query: 2007 QHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQ 1828
               +                               PRR     S  E Y      +    
Sbjct: 759  SSTSNDEIS--------------------------PRRM---RSIQEIYNNTNRINVDHF 789

Query: 1827 IHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKT 1648
             + ALFAG  PV+F + +QD KW +AMD EI AI +  TWEL +LP   + +GVKWVY+T
Sbjct: 790  ANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALGVKWVYRT 849

Query: 1647 KYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDV 1468
            K  SDG V+ YK RL+VKGY QE  VDY+E+F+PV R +TI+L+++LAAQN W V Q+D+
Sbjct: 850  KLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGWKVHQMDI 909

Query: 1467 KSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGF 1288
            KSAFLNG L++ ++V QP GYV++G E+KVY+L+KALYGLKQAPRAWYSRI ++F+K GF
Sbjct: 910  KSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGF 969

Query: 1287 QKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHY 1108
            ++ P+E  L+V+    G FL+V LY                          MSD+G++HY
Sbjct: 970  RRCPYEHALYVKEDKYGKFLIVSLY--------------------------MSDMGLIHY 1003

Query: 1107 FLGLEVVQSSGGTFLS*KKYVSEI 1036
            FLG+EV Q+ G   +S +KY  ++
Sbjct: 1004 FLGIEVNQNEGEIVISQQKYAHDL 1027



 Score =  196 bits (499), Expect(4) = 0.0
 Identities = 92/161 (57%), Positives = 117/161 (72%)
 Frame = -3

Query: 762  FYTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            +Y K ++ +L GF DSD+ G+ DD RSTSGY F  GSGV SW SKKQ +V+LSTTEAEYI
Sbjct: 1118 YYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTSKKQSVVTLSTTEAEYI 1177

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            + ++  CQA+WLR +L E+   Q   T +FCDN S I LSKNPVFHGR+KHI + YHFI+
Sbjct: 1178 SLAAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIK 1237

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            DLV DG V +++C+++D +ADIFTK  KF  F   R  LGV
Sbjct: 1238 DLVKDGEVIVKYCKTQDQVADIFTKAQKFDLFVKFRGKLGV 1278



 Score =  185 bits (470), Expect(4) = 0.0
 Identities = 95/187 (50%), Positives = 122/187 (65%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            FSRK W    + K  +  C +        +     KTLRSDRGGEY    F +F K+ GI
Sbjct: 518  FSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIV--FGNFFKEQGI 575

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
              Q TA  T QQNGVAERKNRTI+ M RS+L    +P +FW + V  TVY+LNR+PT+SV
Sbjct: 576  HHQMTARMTTQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSV 635

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
              MTP EAW  EKP VSHL+VF  IAY+H+ ++ R KLDDK  KCI +GY++ SKAY+ +
Sbjct: 636  PGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLY 695

Query: 2182 DPITEKI 2162
            +P++ KI
Sbjct: 696  NPVSRKI 702



 Score = 90.5 bits (223), Expect(4) = 0.0
 Identities = 42/92 (45%), Positives = 61/92 (66%)
 Frame = -1

Query: 1034 LCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLI 855
            L KF+ +  +   TP +  +KL KD  G+ VD +LY+ +VGSLMYLT +RPDI + VS++
Sbjct: 1028 LKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSML 1087

Query: 854  SRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            SR+M  P   H    KR+LRY+ GT + GI++
Sbjct: 1088 SRFMTNPKRSHWEAGKRVLRYILGTINFGIYY 1119



 Score =  204 bits (519), Expect = 4e-49
 Identities = 107/236 (45%), Positives = 143/236 (60%), Gaps = 5/236 (2%)
 Frame = -3

Query: 3306 DETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSNLLSVGQLLEKGY 3127
            D     T + GDN+ + VKG  DI  + K  T++V +NVFYVPGLK NLLS+GQLL++G 
Sbjct: 332  DNVVKPTCEDGDNTRLQVKGQGDILVKTKKRTKRV-TNVFYVPGLKHNLLSIGQLLQRGL 390

Query: 3126 ELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIVNNPSWLWHLRYGHL 2947
            +++ +  +C I+D    LI++V+MT N+MFPL      + CFSSI+ + SWLWH RYGHL
Sbjct: 391  KVSFEGDICAIKDQADVLISKVKMTANKMFPLNFTYGQISCFSSILKDSSWLWHFRYGHL 450

Query: 2946 NFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKWRAKKVLELVHTDIC 2767
            NFK L  L +  MV+              C++ K +RDSFP    WRA K LEL+HTD+C
Sbjct: 451  NFKSLSYLCKNHMVR-------------VCILAKHHRDSFPTGKAWRASKPLELIHTDLC 497

Query: 2766 GPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFKVLVEKDAGCLIR 2614
            GP+   +NG  RYF     +   KL +YFL  KSEA   FK FK   E  +G  I+
Sbjct: 498  GPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIK 553


>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
          Length = 1041

 Score =  483 bits (1242), Expect(2) = 0.0
 Identities = 272/591 (46%), Positives = 356/591 (60%), Gaps = 5/591 (0%)
 Frame = -3

Query: 2169 KKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIATP 1990
            K ++SRD+VFDE   W+WK N V E IPV+ D                P   E +   T 
Sbjct: 513  KIVLSRDVVFDEKDTWSWKQNGVKENIPVDFD---------DDEKWQQPMENEQEEEVTQ 563

Query: 1989 NAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDDSSQ---IHL 1819
            N P                    +  + RP+R   RP+WM +++  V+G D  +    + 
Sbjct: 564  NVPIVD-------------QSPLATESQRPQRVRKRPAWMTNHE--VTGVDQGEDPLTYF 608

Query: 1818 ALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYKTKYN 1639
            A+F+  D + F+  V++PKW  AMDAEI AI++ +TWEL DLP G K IGVKWVYKTK  
Sbjct: 609  AMFSDCDLIIFETAVKEPKWRKAMDAEIAAIERNDTWELCDLPKGQKTIGVKWVYKTKLK 668

Query: 1638 SDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLDVKSA 1459
             +G VDK+K  L+ KGY QE  VDY EVF+ +ARHDTIKLL              DVK A
Sbjct: 669  ENGEVDKHKACLVAKGYKQEFGVDYKEVFASIARHDTIKLL--------------DVKLA 714

Query: 1458 FLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMGFQKS 1279
            FL+GDL+E V++DQP GY + G+E KVY+L+KALYGLKQ PRAWY+RI  YF+K GFQK 
Sbjct: 715  FLHGDLKEEVFIDQPLGYAKLGNEHKVYKLKKALYGLKQTPRAWYNRIETYFLKEGFQKC 774

Query: 1278 PHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLHYFLG 1099
            P+E TLF++ +  G   +VCLYVDDLIYT N+  ++E FK SMMAEFEMSDLGM+HYFLG
Sbjct: 775  PYEHTLFIKIEDGGKMHIVCLYVDDLIYTGNNTAMFESFKKSMMAEFEMSDLGMMHYFLG 834

Query: 1098 LEVVQSSGGTFLS*KKYVSEIFV*ISNGYLQFCSNTC*GWNEVGERSSRKKGG*YIV*ED 919
            +E++Q S G  +S KKYV EI   +    ++ C N     +E G + ++  GG  +    
Sbjct: 835  IEMMQYSTGILISQKKYVGEI---LDRFQMKDC-NPVNTPSEFGMKLNKDNGGKKV---- 886

Query: 918  CG*SDVLNNFSTGYNV*C*SHQSVYGSSN*NASECRE--ENPPLFKRYS*PWYFFYTKGT 745
                D L             ++ + GS         +      +  RY       +    
Sbjct: 887  ---DDTL-------------YKQIVGSLMYLTITIPDIMHVVSVISRYMEYPTEIHLLAA 930

Query: 744  KPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASSCA 565
            K I     DSDYAGD DDR+STSGY FM G+GV+SW SKKQ IV+LS+TEAE++ A +CA
Sbjct: 931  KRIFRYLKDSDYAGDLDDRKSTSGYVFMMGTGVVSWSSKKQPIVTLSSTEAEFVVAIACA 990

Query: 564  CQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYH 412
            CQA+WL+++L E+HF ++  T I+CDNS TIKLSKNPV HGR+KHI V YH
Sbjct: 991  CQAIWLKKILKELHFKEERPTQIYCDNSLTIKLSKNPVLHGRSKHIDVKYH 1041



 Score =  218 bits (555), Expect(2) = 0.0
 Identities = 108/191 (56%), Positives = 133/191 (69%)
 Frame = -2

Query: 2722 FSRKTWGLLFECKI*SFFCIQRV*GSC*ERCRVSHKTLRSDRGGEYKSNEFADFCKKDGI 2543
            +SRK W    + K  +F   +       +      K  R DRGGEY S+EFA+FC+  GI
Sbjct: 328  YSRKIWVYFLQEKSEAFVAFKSYKALVEKEVGNPIKFFRMDRGGEYNSHEFANFCENHGI 387

Query: 2542 KRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVPKKFWPEVVQWTVYVLNRSPTQSV 2363
            +RQ TA + PQQNGV ERKN TI+NMVRS+L TSG+PK FW E V W++++LNRSPT  V
Sbjct: 388  RRQLTATYIPQQNGVCERKNSTIMNMVRSLLTTSGIPKSFWLEAVNWSIHILNRSPTLVV 447

Query: 2362 INMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKKLDDKGVKCIFLGYSDVSKAYKFF 2183
             NMTP EAWSG K  V+H R+FGCIAYA++ DEKR+KLD+KG KCIFLG SD  KAYK +
Sbjct: 448  QNMTPKEAWSGRKLVVNHFRIFGCIAYAYIPDEKRRKLDNKGEKCIFLGVSDKLKAYKLY 507

Query: 2182 DPITEKIDQSR 2150
            +P T KI  SR
Sbjct: 508  NPSTMKIVLSR 518



 Score =  222 bits (565), Expect = 2e-54
 Identities = 122/246 (49%), Positives = 159/246 (64%), Gaps = 17/246 (6%)
 Frame = -3

Query: 3312 DLDETFISTVKFGDNSTIAVKGI*DIKFQAKN---NTQQVIS---------NVFYVPGLK 3169
            +++ET I+ +   +N+ I +K + + K + ++    TQQ+I          NV  V  LK
Sbjct: 115  EVEETEITMIVGTNNNIIVIKRV-NFKEETEDVEATTQQLIDQSQKTSPMLNVTDVIDLK 173

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV 2989
            +NLLSVGQL EK YE+ +K+GV +I+D K G+I QV MT NR FPL+L N +  CF + +
Sbjct: 174  TNLLSVGQLQEKIYEIFIKDGVFQIQDAKLGIIAQVNMTVNRTFPLYLHNTIHLCFLAKL 233

Query: 2988 NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESKW 2809
               +WLWH RYGHLNF GL  L Q++MV GLPQI    Q CE CVV KQ+ + FP+   W
Sbjct: 234  KYEAWLWHFRYGHLNFGGLKTLQQKNMVTGLPQIIASSQFCEECVVSKQHCNQFPQVKSW 293

Query: 2808 RAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFKVL 2644
            RAKK LELVH+DICGPI P SNG+KRY      +   K+ VYFL  KSEAF  FK +K L
Sbjct: 294  RAKKALELVHSDICGPIIPNSNGSKRYIITFIDDYSRKIWVYFLQEKSEAFVAFKSYKAL 353

Query: 2643 VEKDAG 2626
            VEK+ G
Sbjct: 354  VEKEVG 359


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  225 bits (573), Expect(5) = e-179
 Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 8/387 (2%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTNDVDEFIPVEDDFVGSTSPEIHTPVISPPSSPEPQHIAT 1993
            +K  +SRD++F E      + ND              T+ E  T  I   S  E      
Sbjct: 694  RKIFVSRDVIFVENELQKEQKND-------------GTTKETATVEIEEKSGEENSEAEP 740

Query: 1992 PNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRT---INRPSWMEDYQLQVSGDDSSQIH 1822
             +   E                   V  + PRRT   I +PSW  +Y +      S   +
Sbjct: 741  EHEEQEPNE----------------VNDAEPRRTTRQIRKPSWHSEYVMA-----SHDAY 779

Query: 1821 LALFAGSDPVSFKDVVQDPK---WLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWVYK 1651
              L    +P +F + V       W+ AM  EI+A+ + NTWEL +LP G K IG KWV+K
Sbjct: 780  CLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFK 839

Query: 1650 TKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQLD 1471
             K + +  V++Y+ RL+VKGYAQ++ +D++E+FSPV R  TI++++A+ A     + QLD
Sbjct: 840  IKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLD 899

Query: 1470 VKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIKMG 1291
            VK+AFL+G+L+E +Y+ QP G+  K  E  V RL K+LYGLKQAPR WY R  ++ + +G
Sbjct: 900  VKTAFLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLG 959

Query: 1290 FQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGMLH 1111
            + +   +   + +   DG+F+++ LYVDD++    ++   +E KA +  EF+M DLG  +
Sbjct: 960  YNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPAN 1019

Query: 1110 YFLGLEV--VQSSGGTFLS*KKYVSEI 1036
              LG+++   +     +LS K Y+ ++
Sbjct: 1020 KILGMQIHRDRKDRKIWLSQKNYLQKV 1046



 Score =  165 bits (417), Expect(5) = e-179
 Identities = 79/156 (50%), Positives = 101/156 (64%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            K LR+D GGEY   +F  FCK++GI RQFT A TPQQNGVAER NRT+L   R++L T+G
Sbjct: 545  KCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAG 604

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            + K FW E  +   YV+NRSP+ ++   TP+E W G+    S LRVFGC  Y     ++R
Sbjct: 605  LAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQER 664

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
             KLD K  +C FLGY+D  K Y+ +DP   KI  SR
Sbjct: 665  TKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSR 700



 Score =  160 bits (404), Expect(5) = e-179
 Identities = 73/157 (46%), Positives = 108/157 (68%)
 Frame = -3

Query: 750  GTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYIAASS 571
            G++  + G+ DSD+AGD D R+ST+GY F    G +SW SK Q +V+LSTTEAEY+AA+ 
Sbjct: 1147 GSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQ 1206

Query: 570  CACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIRDLVN 391
               +A+W +RLL E+   Q    T++CD+ S + +++NP FH RTKHIGV YHF+R++V 
Sbjct: 1207 ACKEAIWTQRLLEELGHKQQ-KITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVE 1265

Query: 390  DGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            +G+V++Q   ++DNLAD+ TKP+    F   R   G+
Sbjct: 1266 EGSVNMQKIHTKDNLADVMTKPINSDKFIWCRSSYGL 1302



 Score =  110 bits (276), Expect(5) = e-179
 Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
 Frame = -3

Query: 3342 HMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLKSN 3163
            HM   + +F   +      V  G++  + + GI  +K +  + T + +  V +V  L  N
Sbjct: 300  HMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKELAKN 359

Query: 3162 LLSVGQLLEKGYELTLKNGVCRIEDPKRGLITQVQMTRNRMFPLFLRNDVLPCFSSIV-- 2989
            LLSVGQL + GY+  ++ G+ ++    +G +  ++  +       L  D      + V  
Sbjct: 360  LLSVGQLDDLGYKYDIQGGILKV---VKGSLVVMKAKKVAANLYMLLGDTWQMADASVAV 416

Query: 2988 ---NNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKE 2818
                  + +WH R GH++ +GL +L +R+++ GL  + L    CE CV+ KQ+R  F K 
Sbjct: 417  GSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSL--PFCEHCVISKQHRLKFAK- 473

Query: 2817 SKWRAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEF 2653
            S  R+K +L+L+H+D+      +S G  +YF     +   +L VY +  KS  +SVFKEF
Sbjct: 474  STARSKHILDLIHSDV-WESPEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEF 532

Query: 2652 KVLVEKDAGCLIR 2614
            K  VE + G  I+
Sbjct: 533  KAQVELETGKRIK 545



 Score = 63.2 bits (152), Expect(5) = e-179
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
 Frame = -1

Query: 1058 KRNMFLKYLCKFQTDTCNSVRTPAEVGMKLEK------DPQGKKVDSTLYKKIVGSLMY- 900
            ++N   K L +F     N + TP  V  KL        + +  ++    Y   VGSLMY 
Sbjct: 1039 QKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYA 1098

Query: 899  LTTSRPDITYDVSLISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            +  +RPDI   V  +SR+M  P + H N  KRILRY++GT    + F
Sbjct: 1099 MICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCF 1145


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  321 bits (823), Expect(3) = e-176
 Identities = 176/387 (45%), Positives = 233/387 (60%), Gaps = 8/387 (2%)
 Frame = -3

Query: 2172 QKKLISRDIVFDETRFWNWKTNDVDE--FIPV------EDDFVGSTSPEIHTPVISPPSS 2017
            +K +ISRD +FDE+  WNWK+ +      +P       +    G+   E HTP   P S 
Sbjct: 730  KKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSP 789

Query: 2016 PEPQHIATPNAPTEQGXXXXXXXXXXXXXXXXSVATSRPRRTINRPSWMEDYQLQVSGDD 1837
                  ++ ++P+ +                 S   S PRR  +    +E    Q     
Sbjct: 790  MSSSSASSDSSPSSE--------------EQISTPESAPRRVRSMVELLESTSQQRG--- 832

Query: 1836 SSQIHLALFAGSDPVSFKDVVQDPKWLVAMDAEIKAIDKKNTWELADLPYGHKPIGVKWV 1657
            S Q     ++  +P SF++  +   W+ AM+ EI  I+K NTWEL D P   + IGVKWV
Sbjct: 833  SEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWV 892

Query: 1656 YKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEVFSPVARHDTIKLLIALAAQNSWPVFQ 1477
            YKTK N DG V KYK RL+ KG+ Q+  +DY E ++PVAR +TI+ +IALAAQ  W ++Q
Sbjct: 893  YKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQ 952

Query: 1476 LDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVYRLRKALYGLKQAPRAWYSRI*AYFIK 1297
            LDVKSAFLNG L E +YV+QP G+  +G E KV+RL+KALYGLKQAPRAWYS+I  YFI+
Sbjct: 953  LDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQ 1012

Query: 1296 MGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIYTDNDRLLYEEFKASMMAEFEMSDLGM 1117
             GF KS  EPTL+V  K   + L+V LYVDDLIYT N   + ++FK  MM  +EMSDLG+
Sbjct: 1013 KGFAKSISEPTLYVN-KTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGL 1071

Query: 1116 LHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            LHYFLG+EV QS  G F+S +KY   I
Sbjct: 1072 LHYFLGMEVHQSDEGIFISQRKYAENI 1098



 Score =  181 bits (458), Expect(3) = e-176
 Identities = 86/156 (55%), Positives = 110/156 (70%)
 Frame = -2

Query: 2617 KTLRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSG 2438
            K LRSD+G EY S EF  +C+  GI+RQ TA ++ QQNGVAERKNRTI +M  S+L   G
Sbjct: 581  KVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKG 640

Query: 2437 VPKKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKR 2258
            +PK FW E V   VY+LNRSPT++V N TP EAW G+KP + H+RVFGCI YA V  +KR
Sbjct: 641  MPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKR 700

Query: 2257 KKLDDKGVKCIFLGYSDVSKAYKFFDPITEKIDQSR 2150
             K D+K  +CIF+GY+D  K Y+ ++   +KI  SR
Sbjct: 701  VKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISR 736



 Score =  171 bits (432), Expect(3) = e-176
 Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 6/251 (2%)
 Frame = -3

Query: 3348 SNHMCGDKSFFSDLDETFISTVKFGDNSTIAVKGI*DIKFQAKNNTQQVISNVFYVPGLK 3169
            +NHM  D + F ++D ++ + +  G+ S    +G   +  Q  +  +  I +V  VP LK
Sbjct: 333  TNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQTADGPK-FIKDVLLVPDLK 391

Query: 3168 SNLLSVGQLLEKGYELTLKNGVCRIEDPKRG-LITQVQMTRNRMFPLFLRNDVLPCFSSI 2992
             NLLS+GQLLE GY +  ++  C+I D K   L+ ++ M +NR F L + +       S 
Sbjct: 392  QNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSE 451

Query: 2991 VNNPSWLWHLRYGHLNFKGLGILYQRDMVKGLPQIDLQEQLCEGCVVGKQNRDSFPKESK 2812
            V+  S LWH R GHLN++ L +L  + MV+GLP I L+   CEGCV GKQ R SFP    
Sbjct: 452  VDI-SDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGA 510

Query: 2811 WRAKKVLELVHTDICGPITPLSNGNKRYF-----NLVAKLGVYFLNAKSEAFSVFKEFKV 2647
            WRA   LELVH DI G +  +S G   YF     +    + VYFL  KS A  +FK+FK 
Sbjct: 511  WRASAPLELVHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKA 570

Query: 2646 LVEKDAGCLIR 2614
            +VE  +   I+
Sbjct: 571  MVENQSNRKIK 581



 Score =  142 bits (358), Expect = 2e-30
 Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 11/172 (6%)
 Frame = -3

Query: 759  YTKGT-------KPI----LLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIV 613
            Y KGT       KP+    L+G+TDSD+AG  DD +STSGYAF  GS             
Sbjct: 1179 YIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSA------------ 1226

Query: 612  SLSTTEAEYIAASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTK 433
                 EAEY+AAS    Q VWLRR++ ++   Q   TTI+CD+ S I +S+NPV H RTK
Sbjct: 1227 -----EAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTK 1281

Query: 432  HIGVHYHFIRDLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGVC 277
            HI + YH+IR+ V+   V ++ CR+++ LADIFTK L    F   R+L+GVC
Sbjct: 1282 HIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGVC 1333



 Score = 96.3 bits (238), Expect = 2e-16
 Identities = 46/103 (44%), Positives = 65/103 (63%)
 Frame = -1

Query: 1067 FYLKRNMFLKYLCKFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTS 888
            F  +R      L KF+ D C SV TP     K +      K D T+Y+ +VGSL+YLT +
Sbjct: 1088 FISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTAT 1147

Query: 887  RPDITYDVSLISRYMEAPTEMHLNVAKRILRYLKGTPDLGIFF 759
            RPDI +  SL+SRYM +P++++   AKR+LRY+KGT D GI++
Sbjct: 1148 RPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWY 1190


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  324 bits (830), Expect(3) = e-166
 Identities = 163/293 (55%), Positives = 215/293 (73%), Gaps = 6/293 (2%)
 Frame = -3

Query: 1896 RTINRPSWMEDYQLQVSGD----DSSQIH-LALFAGSD-PVSFKDVVQDPKWLVAMDAEI 1735
            R   +P WM+ Y   VSG+    +  ++H LA+F  SD P SF++ V   +W  AM AEI
Sbjct: 640  RNRRQPIWMQGY---VSGEGLSEEEQELHNLAVFTPSDDPSSFEEAVVHSRWREAMRAEI 696

Query: 1734 KAIDKKNTWELADLPYGHKPIGVKWVYKTKYNSDGMVDKYKTRLIVKGYAQEK*VDYDEV 1555
            +AI+  +TW+L  LP G K IGVKWV+KTKYN  G VDK K RL+ KGYAQ+  +DY EV
Sbjct: 697  EAIETNDTWQLTSLPKGVKKIGVKWVFKTKYNEHGKVDKCKARLVAKGYAQQFGIDYTEV 756

Query: 1554 FSPVARHDTIKLLIALAAQNSWPVFQLDVKSAFLNGDLQETVYVDQPPGYVRKGSEKKVY 1375
            ++PVAR DTI+L++ALAAQ +W +FQLDVKSAFL+G+L E VY++QP G+ +KG E+KVY
Sbjct: 757  YAPVARWDTIRLIVALAAQKNWTIFQLDVKSAFLHGELNEDVYIEQPQGFEQKGEEEKVY 816

Query: 1374 RLRKALYGLKQAPRAWYSRI*AYFIKMGFQKSPHEPTLFVQAKPDGNFLVVCLYVDDLIY 1195
            +L+KALYGLKQAPRAWYSRI  YF+K GF++  +E TLFV+ + +G  L+V LYVDD I+
Sbjct: 817  KLKKALYGLKQAPRAWYSRIEGYFVKEGFERCSYEHTLFVKIEGEGKMLIVSLYVDDQIF 876

Query: 1194 TDNDRLLYEEFKASMMAEFEMSDLGMLHYFLGLEVVQSSGGTFLS*KKYVSEI 1036
            T ND  + E+FK+SMM EFEM+DLG + YFLG+E+ QS+ G  L   KY  E+
Sbjct: 877  TGNDMSMIEKFKSSMMHEFEMTDLGEMKYFLGVEIRQSAEGIHLCQSKYAREV 929



 Score =  212 bits (540), Expect(3) = e-166
 Identities = 97/161 (60%), Positives = 125/161 (77%)
 Frame = -3

Query: 762  FYTKGTKPILLGFTDSDYAGDPDDRRSTSGYAFMFGSGVISWCSKKQQIVSLSTTEAEYI 583
            FY +G    L+G+TDSDYAGD D +RSTSG+ FM   G +SW S+KQ +V+LSTTEAEY+
Sbjct: 1020 FYRRGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTLSTTEAEYV 1079

Query: 582  AASSCACQAVWLRRLLAEVHFPQDGSTTIFCDNSSTIKLSKNPVFHGRTKHIGVHYHFIR 403
            AA+ CACQ+VW+RR+L ++ + Q    T+FCDNSSTIKLSKNPVFHGR+KHI V +HF+R
Sbjct: 1080 AAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVRFHFLR 1139

Query: 402  DLVNDGTVDIQHCRSEDNLADIFTKPLKFAAFENLRKLLGV 280
            DL  DG V+++   S++ +ADI TKPLK   FE LR+LLGV
Sbjct: 1140 DLTKDGVVELKFYGSKEQIADILTKPLKMERFEKLRELLGV 1180



 Score =  103 bits (256), Expect(3) = e-166
 Identities = 51/97 (52%), Positives = 66/97 (68%)
 Frame = -1

Query: 1028 KFQTDTCNSVRTPAEVGMKLEKDPQGKKVDSTLYKKIVGSLMYLTTSRPDITYDVSLISR 849
            +F     N VR P   G KL  +  G  VD TL+K++VGSLMYLT +RPD+ Y V LISR
Sbjct: 932  RFGMGKSNPVRNPIVPGSKLSMEAGGAVVDGTLFKQLVGSLMYLTATRPDLIYVVCLISR 991

Query: 848  YMEAPTEMHLNVAKRILRYLKGTPDLGIFFIRKVPNQ 738
            +M  P E HL+ AKR+LRYLKGT +LG+F+ R V ++
Sbjct: 992  FMAHPREAHLSAAKRVLRYLKGTTELGVFYRRGVDDE 1028



 Score =  189 bits (481), Expect(2) = 3e-47
 Identities = 88/136 (64%), Positives = 106/136 (77%)
 Frame = -2

Query: 2611 LRSDRGGEYKSNEFADFCKKDGIKRQFTAAFTPQQNGVAERKNRTILNMVRSVLYTSGVP 2432
            LR+DRGGE+ S EF +FCK  GIKRQ TAA++PQQNGVAER+NRTI+N+VRSVL    VP
Sbjct: 428  LRTDRGGEFTSIEFNEFCKSSGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLSEKRVP 487

Query: 2431 KKFWPEVVQWTVYVLNRSPTQSVINMTPIEAWSGEKPRVSHLRVFGCIAYAHVTDEKRKK 2252
            K +WPE V+W  +VLNRSPT  V ++TP EAWSG KP V + RVFGCIA+AH+ D KR K
Sbjct: 488  KSYWPEAVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRVFGCIAHAHIPDAKRTK 547

Query: 2251 LDDKGVKCIFLGYSDV 2204
             DDK  KC+FLG + V
Sbjct: 548  FDDKSCKCVFLGRTQV 563



 Score = 30.4 bits (67), Expect(2) = 3e-47
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -3

Query: 2685 KSEAFSVFKEFKVLVEKDAGCLI 2617
            KSE F++FK++K LVEK+ G  I
Sbjct: 403  KSETFTMFKQYKNLVEKETGLSI 425


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