BLASTX nr result
ID: Papaver29_contig00048115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00048115
(1326 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 75 9e-35
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 is... 70 4e-33
ref|XP_011463162.1| PREDICTED: probable RNA-dependent RNA polyme... 70 4e-33
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 78 5e-33
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 64 6e-33
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha... 64 7e-33
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali... 64 6e-32
emb|CAA09894.1| RNA-directed RNA polymerase [Arabidopsis thaliana] 64 6e-32
ref|XP_008381759.1| PREDICTED: probable RNA-dependent RNA polyme... 61 3e-30
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme... 79 9e-30
ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polyme... 65 1e-29
ref|XP_010043971.1| PREDICTED: probable RNA-dependent RNA polyme... 71 1e-29
ref|XP_010043968.1| PREDICTED: probable RNA-dependent RNA polyme... 74 2e-29
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis... 61 4e-29
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza] 72 9e-29
gb|KDO60785.1| hypothetical protein CISIN_1g0025862mg [Citrus si... 75 4e-28
gb|KDO60787.1| hypothetical protein CISIN_1g0025862mg [Citrus si... 75 4e-28
gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [... 75 1e-27
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 75 1e-23
ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polyme... 75 1e-23
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 74.7 bits (182), Expect(5) = 9e-35
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K D E FLS+MLQT +KLLELRTKT IF +P RSM+ +DE TL YG+VFV
Sbjct: 679 LICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIF-IPNGRSMMGCLDETRTLNYGQVFV 737
Query: 690 QVSCLG-REQSVEIHTLCLMRMDQRTIT--LLYLERSALLKIRCCTLVICVLQAVDVPA 523
Q+S G R+ E R QR I L+ + ++ L + VL+AV+VPA
Sbjct: 738 QISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLH----PGDVRVLKAVNVPA 792
Score = 49.3 bits (116), Expect(5) = 9e-35
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 795 HMVDCVVFPQKGMRPHPNECSGSDLDGD 822
Score = 41.2 bits (95), Expect(5) = 9e-35
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SS ETLS
Sbjct: 493 FREIRNVAKYAARLGQSFSSSKETLS 518
Score = 37.7 bits (86), Expect(5) = 9e-35
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
+SAWMFAS+ LTAA IRE +G+FR+
Sbjct: 470 SSAWMFASRYGLTAAEIREWMGNFRE 495
Score = 33.5 bits (75), Expect(5) = 9e-35
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = -3
Query: 1180 VASKGGLKSMPSAFFQNRYGGSSGF-----SES*KA*VNSRHR-----TPNLMF*NGASF 1031
VASK GLK P + FQ RYGG G + S K + R L + +
Sbjct: 556 VASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKY 615
Query: 1030 SHFFVIVK**SF--CLGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
F+ + S LGI D +FE +Q+ + +T PL+A EAL ++S E
Sbjct: 616 QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGE 670
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Fragaria
vesca subsp. vesca]
Length = 1119
Score = 69.7 bits (169), Expect(5) = 4e-33
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K + E FLS+MLQT +KLLELRTKT IF +P R+M+ +DE TLEYG+VFV
Sbjct: 666 LMCGYKPNVEPFLSMMLQTFRASKLLELRTKTRIF-IPDGRAMMGCLDETRTLEYGQVFV 724
Query: 690 QVSCLGREQ 664
Q S R Q
Sbjct: 725 QFSGKRRRQ 733
Score = 49.7 bits (117), Expect(5) = 4e-33
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSK+ S+NTKLDVL SK+QP F NRQ++ LLS
Sbjct: 582 KSMSKYESENTKLDVLACSKYQPCFLNRQLITLLS 616
Score = 49.3 bits (116), Expect(5) = 4e-33
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 780 HMVDCVVFPQKGHRPHPNECSGSDLDGD 807
Score = 36.2 bits (82), Expect(5) = 4e-33
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -3
Query: 619 DNNFVVLGKVSIAKNPLLHPGDM 551
D+ F++ GKV +AKNP LHPGD+
Sbjct: 745 DSCFIIEGKVVVAKNPCLHPGDV 767
Score = 25.8 bits (55), Expect(5) = 4e-33
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAEA 869
L + D+VF +Q+ + +T PL+A EAL ++S E+
Sbjct: 618 LEVQDHVFLKKQRAAVQQLNAILTDPLKAEEALDLMSAGES 658
>ref|XP_011463162.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
[Fragaria vesca subsp. vesca]
Length = 1089
Score = 69.7 bits (169), Expect(5) = 4e-33
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K + E FLS+MLQT +KLLELRTKT IF +P R+M+ +DE TLEYG+VFV
Sbjct: 636 LMCGYKPNVEPFLSMMLQTFRASKLLELRTKTRIF-IPDGRAMMGCLDETRTLEYGQVFV 694
Query: 690 QVSCLGREQ 664
Q S R Q
Sbjct: 695 QFSGKRRRQ 703
Score = 49.7 bits (117), Expect(5) = 4e-33
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSK+ S+NTKLDVL SK+QP F NRQ++ LLS
Sbjct: 552 KSMSKYESENTKLDVLACSKYQPCFLNRQLITLLS 586
Score = 49.3 bits (116), Expect(5) = 4e-33
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 750 HMVDCVVFPQKGHRPHPNECSGSDLDGD 777
Score = 36.2 bits (82), Expect(5) = 4e-33
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -3
Query: 619 DNNFVVLGKVSIAKNPLLHPGDM 551
D+ F++ GKV +AKNP LHPGD+
Sbjct: 715 DSCFIIEGKVVVAKNPCLHPGDV 737
Score = 25.8 bits (55), Expect(5) = 4e-33
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAEA 869
L + D+VF +Q+ + +T PL+A EAL ++S E+
Sbjct: 588 LEVQDHVFLKKQRAAVQQLNAILTDPLKAEEALDLMSAGES 628
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962527|ref|XP_010275424.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962530|ref|XP_010275500.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962533|ref|XP_010275583.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962536|ref|XP_010275643.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962539|ref|XP_010275710.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
Length = 1136
Score = 77.8 bits (190), Expect(4) = 5e-33
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ LLC + + E FLS+MLQT +KLLELRTKT IF VP RS++ +DE TL+YG+V
Sbjct: 674 EMLLCGYEPNAEPFLSMMLQTFRASKLLELRTKTRIF-VPNGRSLLGCLDETRTLKYGEV 732
Query: 696 FVQVSCLGREQSVEIHTLCLMRMDQRTITLLYLERSALLKIRCC-TLVICVLQAVDVPA 523
FVQVS +GR Q E + + + + K C + +LQAV+VPA
Sbjct: 733 FVQVSSIGRRQFHESSLFVFSGNEPEQQKFIVEGKIIVAKNPCLHPGDVRLLQAVNVPA 791
Score = 54.3 bits (129), Expect(4) = 5e-33
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
+SMSK+ S+NTKLDVL WSK+QP F NRQ++ LLS
Sbjct: 592 RSMSKYESRNTKLDVLSWSKYQPCFLNRQIITLLS 626
Score = 51.6 bits (122), Expect(4) = 5e-33
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ GKRPHPNECS SD D
Sbjct: 794 HMVDCVVFPQEGKRPHPNECSGSDLDGD 821
Score = 27.3 bits (59), Expect(4) = 5e-33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG+ D +FE +QK + +T L+A EAL I+S E
Sbjct: 628 LGVRDSIFEKKQKEAMDQLDAILTDSLKAQEALEIMSPGE 667
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 63.9 bits (154), Expect(5) = 6e-33
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
+LC K D E FLS+MLQ +KLLELRTKT IF + RSM+ +DE TLEYG+V V
Sbjct: 663 ILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIF-ISGGRSMMGCLDETRTLEYGQVVV 721
Query: 690 QVS 682
Q S
Sbjct: 722 QYS 724
Score = 55.1 bits (131), Expect(5) = 6e-33
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSKF S+NTKLDVL WSK+QP + NRQ++ LLS
Sbjct: 579 KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLS 613
Score = 48.9 bits (115), Expect(5) = 6e-33
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 765 HMVDCVVFPQKGLRPHPNECSGSDLDGD 792
Score = 33.1 bits (74), Expect(5) = 6e-33
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 610 FVVLGKVSIAKNPLLHPGDM 551
F++ G V +AKNP LHPGD+
Sbjct: 733 FIITGPVVVAKNPCLHPGDV 752
Score = 29.3 bits (64), Expect(5) = 6e-33
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LGI D VFE +Q+ +T PL A EALG+++ E
Sbjct: 615 LGIKDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGE 654
>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
AltName: Full=RNA-directed RNA polymerase 1
gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
[Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
putative RNA-directed RNA polymerase [Arabidopsis
thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 63.9 bits (154), Expect(5) = 7e-33
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
+LC K D E FLS+MLQ +KLLELRTKT IF + RSM+ +DE TLEYG+V V
Sbjct: 672 ILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIF-ISGGRSMMGCLDETRTLEYGQVVV 730
Query: 690 QVS 682
Q S
Sbjct: 731 QYS 733
Score = 55.1 bits (131), Expect(5) = 7e-33
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSKF S+NTKLDVL WSK+QP + NRQ++ LLS
Sbjct: 588 KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLS 622
Score = 48.9 bits (115), Expect(5) = 7e-33
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 774 HMVDCVVFPQKGLRPHPNECSGSDLDGD 801
Score = 33.1 bits (74), Expect(5) = 7e-33
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 610 FVVLGKVSIAKNPLLHPGDM 551
F++ G V +AKNP LHPGD+
Sbjct: 742 FIITGPVVVAKNPCLHPGDV 761
Score = 28.9 bits (63), Expect(5) = 7e-33
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG++D VFE +Q+ +T PL A EALG+++ E
Sbjct: 624 LGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGE 663
>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
Length = 1107
Score = 63.9 bits (154), Expect(5) = 6e-32
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
+LC K D E FLS+MLQ +KLLELRTKT IF + RSM+ +DE TLEYG+V V
Sbjct: 672 ILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIF-ISGGRSMMGCLDETRTLEYGQVVV 730
Query: 690 QVS 682
Q S
Sbjct: 731 QYS 733
Score = 55.1 bits (131), Expect(5) = 6e-32
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSKF S+NTKLDVL WSK+QP + NRQ++ LLS
Sbjct: 588 KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLS 622
Score = 48.9 bits (115), Expect(5) = 6e-32
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 774 HMVDCVVFPQKGLRPHPNECSGSDLDGD 801
Score = 30.0 bits (66), Expect(5) = 6e-32
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 610 FVVLGKVSIAKNPLLHPGDM 551
F++ G V +AKNP LH GD+
Sbjct: 742 FIITGPVVVAKNPCLHSGDV 761
Score = 28.9 bits (63), Expect(5) = 6e-32
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG++D VFE +Q+ +T PL A EALG+++ E
Sbjct: 624 LGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGE 663
>emb|CAA09894.1| RNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 513
Score = 63.9 bits (154), Expect(5) = 6e-32
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
+LC K D E FLS+MLQ +KLLELRTKT IF + RSM+ +DE TLEYG+V V
Sbjct: 194 ILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIF-ISGGRSMMGCLDETRTLEYGQVVV 252
Query: 690 QVS 682
Q S
Sbjct: 253 QYS 255
Score = 55.1 bits (131), Expect(5) = 6e-32
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSKF S+NTKLDVL WSK+QP + NRQ++ LLS
Sbjct: 110 KSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLS 144
Score = 48.9 bits (115), Expect(5) = 6e-32
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 296 HMVDCVVFPQKGLRPHPNECSGSDLDGD 323
Score = 30.0 bits (66), Expect(5) = 6e-32
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 610 FVVLGKVSIAKNPLLHPGDM 551
F++ G V +AKNP LH GD+
Sbjct: 264 FIITGPVVVAKNPCLHSGDV 283
Score = 28.9 bits (63), Expect(5) = 6e-32
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG++D VFE +Q+ +T PL A EALG+++ E
Sbjct: 146 LGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLMAPGE 185
>ref|XP_008381759.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus
domestica]
Length = 1084
Score = 61.2 bits (147), Expect(5) = 3e-30
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ LL K D E FLS+MLQ +KL+ELRTKT IF VPK R ++ +DE TL+YG+V
Sbjct: 650 EMLLSGYKPDAEPFLSLMLQAFCASKLVELRTKTRIF-VPKGRWLLGCLDETKTLKYGQV 708
Query: 696 FVQVS 682
FV+ S
Sbjct: 709 FVRCS 713
Score = 47.0 bits (110), Expect(5) = 3e-30
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ GKRPHP+EC+ D D
Sbjct: 763 HMVDCVVFPQKGKRPHPDECAGGDLDGD 790
Score = 44.7 bits (104), Expect(5) = 3e-30
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
+SM K+ S+NT LDVL+WS+ QP F NRQ++ L S
Sbjct: 568 ESMCKYQSENTALDVLQWSRNQPCFLNRQLITLFS 602
Score = 37.7 bits (86), Expect(5) = 3e-30
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -3
Query: 619 DNNFVVLGKVSIAKNPLLHPGDM 551
++NF V+GKV +A+NP LHPGD+
Sbjct: 728 EDNFTVVGKVVVARNPCLHPGDV 750
Score = 30.4 bits (67), Expect(5) = 3e-30
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAEA 869
LG+ DYVF+ +Q + +T PLRA EAL + EA
Sbjct: 604 LGVPDYVFQKKQNQDLKKLQGVLTDPLRALEALETIFQGEA 644
>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
gi|731369199|ref|XP_010650995.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1109
Score = 79.3 bits (194), Expect(4) = 9e-30
Identities = 44/72 (61%), Positives = 51/72 (70%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ L+C K D E FLS+MLQT AKLLELRTKT IF VP RSM+ +DE TLEYG+V
Sbjct: 660 EMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIF-VPNGRSMMGCLDETRTLEYGEV 718
Query: 696 FVQVSCLGREQS 661
FVQ+S G QS
Sbjct: 719 FVQISGTGGRQS 730
Score = 49.3 bits (116), Expect(4) = 9e-30
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSM K+ S+NT LDVL WSK++P F NRQ++ LLS
Sbjct: 578 KSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLS 612
Score = 42.0 bits (97), Expect(4) = 9e-30
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = -3
Query: 658 GDSHSMLNENGPEDNNFVVLGKVSIAKNPLLHPGDMCLAGCRCASAIWWIVFYFLDKEKD 479
GDS M +G +NF++ GKV +AKNP LHPGD+ + A+ +V + +K
Sbjct: 732 GDS-LMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKG 790
Query: 478 PIQMNVQRVILKVTSDLYFVC 416
+ + D+YFVC
Sbjct: 791 MRPHPDECSGSDLDGDIYFVC 811
Score = 29.3 bits (64), Expect(4) = 9e-30
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG+ D+VFE +Q+ + + PLRA EAL ++S E
Sbjct: 614 LGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGE 653
Score = 42.0 bits (97), Expect(2) = 8e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLSGE*GRVEKYAICLLP 1134
F IRN+AK+AARLGQSF+SS ETL +V K+ I ++P
Sbjct: 476 FSQIRNVAKYAARLGQSFSSSKETL-----KVAKHEIEIIP 511
Score = 37.0 bits (84), Expect(2) = 8e-06
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDF 1255
NSAWMFAS+ LTAA IR +GDF
Sbjct: 453 NSAWMFASRPGLTAADIRSRMGDF 476
>ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Pyrus x
bretschneideri] gi|694320773|ref|XP_009351562.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
[Pyrus x bretschneideri]
Length = 1116
Score = 64.7 bits (156), Expect(5) = 1e-29
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L C K D E FLS+MLQT +KLL+LR KT IF +P ++M+ +DE TLEYG+VFV
Sbjct: 670 LTCGYKPDVEPFLSMMLQTFRASKLLDLRLKTRIF-IPDGQAMMGCLDETGTLEYGEVFV 728
Query: 690 QVS 682
Q S
Sbjct: 729 QFS 731
Score = 49.7 bits (117), Expect(5) = 1e-29
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ G RPHPNECS SD D
Sbjct: 775 HMVDCVVFPQKGSRPHPNECSGSDLDGD 802
Score = 47.8 bits (112), Expect(5) = 1e-29
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -2
Query: 1094 KSMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
KSMSK+ S+N KLDVL SK+QP F NRQ++ LLS
Sbjct: 586 KSMSKYESENAKLDVLACSKYQPCFLNRQLITLLS 620
Score = 33.1 bits (74), Expect(5) = 1e-29
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 628 GPEDNNFVVLGKVSIAKNPLLHPGDM 551
G N + GKV +AKNP LHPGD+
Sbjct: 737 GSAPNQQFIEGKVVVAKNPCLHPGDV 762
Score = 23.9 bits (50), Expect(5) = 1e-29
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
L + D VF +Q+ + +T PL+A EAL ++S E
Sbjct: 622 LEVPDLVFMKKQRAAVQQLNAILTDPLKAQEALDLMSPGE 661
>ref|XP_010043971.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Eucalyptus
grandis]
Length = 1115
Score = 71.2 bits (173), Expect(4) = 1e-29
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ L+C + D E FLS+ML+T +KLL+LRTK IF VP RSM+ +DE TLEYG+V
Sbjct: 666 EMLICGYEPDVEPFLSMMLRTFCASKLLDLRTKARIF-VPNGRSMMGCLDETGTLEYGQV 724
Query: 696 FVQVSCLGREQSVEIHTLCLMRMDQRTITLLYLERSALLKIRCC-TLVICVLQAVDVP 526
FVQ S +G Q L R + ++ + K C + VL+AVDVP
Sbjct: 725 FVQFSRVGNLQFGSKTMLKSSRSESPLDAFIFQGELVVAKNPCLHPGDVRVLKAVDVP 782
Score = 53.9 bits (128), Expect(4) = 1e-29
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -2
Query: 530 CQRHMVDCVLFPR*GKRPHPNECSESDFKSD 438
C HMVDC++FP+ GKRPHPNECS SD D
Sbjct: 783 CLHHMVDCIVFPQKGKRPHPNECSGSDLDGD 813
Score = 49.3 bits (116), Expect(4) = 1e-29
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -2
Query: 1091 SMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
SM K+ S NTKLDVL WS++QP F NRQ++ LLS
Sbjct: 585 SMLKYESSNTKLDVLAWSRYQPCFLNRQIITLLS 618
Score = 25.0 bits (53), Expect(4) = 1e-29
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG+ D++FE +Q+ + + PL A AL ++S E
Sbjct: 620 LGVEDHIFERKQREALCQLDAILKDPLVAQHALELMSPGE 659
>ref|XP_010043968.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Eucalyptus
grandis]
Length = 1115
Score = 73.6 bits (179), Expect(4) = 2e-29
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ L+C + D E FLS+ML+T +KLL+LRTK IF VP RSM+ +DE TLEYG+V
Sbjct: 666 EMLICGYEPDVEPFLSMMLRTFCASKLLDLRTKARIF-VPNGRSMMGCLDETKTLEYGQV 724
Query: 696 FVQVSCLGREQSVEIHTLCLMRMDQRTITLLYLERSALLKIRCC-TLVICVLQAVDVPA 523
FVQ+S +G Q L R + T ++ + K C + VL+AVD+P+
Sbjct: 725 FVQLSRVGNLQFGSKTMLKSSRSESPLDTFIFQGELVVAKNPCLHPGDVRVLKAVDIPS 783
Score = 51.2 bits (121), Expect(4) = 2e-29
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDC++FP+ GKRPHPNECS SD D
Sbjct: 786 HMVDCIVFPQKGKRPHPNECSGSDLDGD 813
Score = 49.3 bits (116), Expect(4) = 2e-29
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -2
Query: 1091 SMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
SM K+ S NTKLDVL WS++QP F NRQ++ LLS
Sbjct: 585 SMLKYESSNTKLDVLAWSRYQPCFLNRQIITLLS 618
Score = 25.0 bits (53), Expect(4) = 2e-29
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG+ D++FE +Q+ + + PL A AL ++S E
Sbjct: 620 LGVEDHIFERKQREALCQLDAILKDPLVAQRALELMSPGE 659
Score = 43.5 bits (101), Expect(2) = 3e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLSGE*GRVEK 1155
F IRN+AK+AARLGQSF+SSTETL+ VE+
Sbjct: 482 FRKIRNVAKYAARLGQSFSSSTETLNVRKDEVER 515
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1
Query: 1323 SAWMFASKGPLTAASIRECIGDFR 1252
S WMFAS+ LTAA IRE +GDFR
Sbjct: 460 SLWMFASREGLTAADIREWMGDFR 483
>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|778697874|ref|XP_011654424.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X1 [Cucumis
sativus] gi|316989901|gb|ADU77016.1| RNA-dependent RNA
polymerase 1b [Cucumis sativus]
gi|700195585|gb|KGN50762.1| hypothetical protein
Csa_5G239640 [Cucumis sativus]
Length = 1115
Score = 60.8 bits (146), Expect(5) = 4e-29
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ +LC K D E FL +ML T +KL+ELR K+ IF +P R+M+ +DE LEYG+V
Sbjct: 672 EMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIF-IPNGRAMMGCLDETRNLEYGEV 730
Query: 696 FVQVS 682
FVQ S
Sbjct: 731 FVQCS 735
Score = 49.3 bits (116), Expect(5) = 4e-29
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HM+DCV+FP+ G RPHPNECS SD D
Sbjct: 788 HMIDCVVFPQKGSRPHPNECSGSDLDGD 815
Score = 45.8 bits (107), Expect(5) = 4e-29
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -2
Query: 1091 SMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
SM K+ S +TKLDVL WSK+ P F NRQ++ LLS
Sbjct: 591 SMLKYESTDTKLDVLSWSKYHPCFLNRQLITLLS 624
Score = 34.3 bits (77), Expect(5) = 4e-29
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -3
Query: 619 DNNFVVLGKVSIAKNPLLHPGDM 551
+ +F+V G V +AKNP LHPGD+
Sbjct: 753 NRHFIVTGTVVVAKNPCLHPGDV 775
Score = 26.9 bits (58), Expect(5) = 4e-29
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -3
Query: 991 LGISDYVFENEQKR--SSL*T*FDITGPLRACEALGILSVAE 872
LG+ D+VFE++Q+ L T F + PL+A +AL ++S E
Sbjct: 626 LGVQDHVFESKQQELIDELDTIF--SDPLKAQQALELMSPGE 665
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF SSTETLS
Sbjct: 488 FHNIRNVAKYAARLGQSFGSSTETLS 513
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
N+AWMFA K LTAA IR+ +GDF +
Sbjct: 465 NAAWMFAPKNELTAAKIRQWMGDFHN 490
>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
Length = 1118
Score = 72.0 bits (175), Expect(4) = 9e-29
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Frame = -1
Query: 876 QKLLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKV 697
+ L C K D+E FL++MLQT ++LL+LRTK+ IF +P+ R+M+ +DE TLEYG+V
Sbjct: 599 EMLKCGYKPDEEPFLAMMLQTFRSSQLLDLRTKSRIF-IPQARNMMGCLDETGTLEYGQV 657
Query: 696 FVQVSCLGREQSVEIHTLCLMRMDQRTIT---LLYLERSALLKIRCC-TLVICVLQAVDV 529
FVQ S G+ + E ++ D+ T T + + A+ K C + VL+A+DV
Sbjct: 658 FVQFSGAGQRRFYEES----IKFDEYTSTDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDV 713
Query: 528 PA 523
PA
Sbjct: 714 PA 715
Score = 47.0 bits (110), Expect(4) = 9e-29
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMV+C++FP+ G RPHPNECS SD D
Sbjct: 718 HMVNCIVFPQKGTRPHPNECSGSDLDGD 745
Score = 46.2 bits (108), Expect(4) = 9e-29
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -2
Query: 1091 SMSKFTSQNTKLDVLKWSKFQPFFRNRQVMILLS 990
SM K+ S +TKL+VL WSK+QP F NRQ++ LLS
Sbjct: 518 SMLKYQSDDTKLNVLGWSKYQPCFLNRQIITLLS 551
Score = 31.2 bits (69), Expect(4) = 9e-29
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 991 LGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
LG+ D+VFE +Q+ + + PL+A EAL ++S+ E
Sbjct: 553 LGVMDHVFEKKQREAVAQLNDILVDPLKALEALDLMSLGE 592
>gb|KDO60785.1| hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
gi|641841876|gb|KDO60786.1| hypothetical protein
CISIN_1g0025862mg [Citrus sinensis]
Length = 724
Score = 74.7 bits (182), Expect(5) = 4e-28
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K D E FLS+MLQT +KLLELRTKT IF +P RSM+ +DE TL YG+VFV
Sbjct: 568 LICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIF-IPNGRSMMGCLDETRTLNYGQVFV 626
Query: 690 QVSCLG-REQSVEIHTLCLMRMDQRTIT--LLYLERSALLKIRCCTLVICVLQAVDVPA 523
Q+S G R+ E R QR I L+ + ++ L + VL+AV+VPA
Sbjct: 627 QISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLH----PGDVRVLKAVNVPA 681
Score = 41.2 bits (95), Expect(5) = 4e-28
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SS ETLS
Sbjct: 382 FREIRNVAKYAARLGQSFSSSKETLS 407
Score = 37.7 bits (86), Expect(5) = 4e-28
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
+SAWMFAS+ LTAA IRE +G+FR+
Sbjct: 359 SSAWMFASRYGLTAAEIREWMGNFRE 384
Score = 33.5 bits (75), Expect(5) = 4e-28
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = -3
Query: 1180 VASKGGLKSMPSAFFQNRYGGSSGF-----SES*KA*VNSRHR-----TPNLMF*NGASF 1031
VASK GLK P + FQ RYGG G + S K + R L + +
Sbjct: 445 VASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKY 504
Query: 1030 SHFFVIVK**SF--CLGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
F+ + S LGI D +FE +Q+ + +T PL+A EAL ++S E
Sbjct: 505 QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGE 559
Score = 26.6 bits (57), Expect(5) = 4e-28
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 521 HMVDCVLFPR*GKR 480
HMVDCV+FP+ G R
Sbjct: 684 HMVDCVVFPQKGMR 697
>gb|KDO60787.1| hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
Length = 607
Score = 74.7 bits (182), Expect(5) = 4e-28
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K D E FLS+MLQT +KLLELRTKT IF +P RSM+ +DE TL YG+VFV
Sbjct: 451 LICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIF-IPNGRSMMGCLDETRTLNYGQVFV 509
Query: 690 QVSCLG-REQSVEIHTLCLMRMDQRTIT--LLYLERSALLKIRCCTLVICVLQAVDVPA 523
Q+S G R+ E R QR I L+ + ++ L + VL+AV+VPA
Sbjct: 510 QISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLH----PGDVRVLKAVNVPA 564
Score = 41.2 bits (95), Expect(5) = 4e-28
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SS ETLS
Sbjct: 265 FREIRNVAKYAARLGQSFSSSKETLS 290
Score = 37.7 bits (86), Expect(5) = 4e-28
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
+SAWMFAS+ LTAA IRE +G+FR+
Sbjct: 242 SSAWMFASRYGLTAAEIREWMGNFRE 267
Score = 33.5 bits (75), Expect(5) = 4e-28
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = -3
Query: 1180 VASKGGLKSMPSAFFQNRYGGSSGF-----SES*KA*VNSRHR-----TPNLMF*NGASF 1031
VASK GLK P + FQ RYGG G + S K + R L + +
Sbjct: 328 VASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKY 387
Query: 1030 SHFFVIVK**SF--CLGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
F+ + S LGI D +FE +Q+ + +T PL+A EAL ++S E
Sbjct: 388 QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGE 442
Score = 26.6 bits (57), Expect(5) = 4e-28
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 521 HMVDCVLFPR*GKR 480
HMVDCV+FP+ G R
Sbjct: 567 HMVDCVVFPQKGMR 580
>gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [Citrus sinensis]
Length = 579
Score = 74.7 bits (182), Expect(5) = 1e-27
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
L+C K D E FLS+MLQT +KLLELRTKT IF +P RSM+ +DE TL YG+VFV
Sbjct: 451 LICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIF-IPNGRSMMGCLDETRTLNYGQVFV 509
Query: 690 QVSCLG-REQSVEIHTLCLMRMDQRTIT--LLYLERSALLKIRCCTLVICVLQAVDVPA 523
Q+S G R+ E R QR I L+ + ++ L + VL+AV+VPA
Sbjct: 510 QISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLH----PGDVRVLKAVNVPA 564
Score = 41.2 bits (95), Expect(5) = 1e-27
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SS ETLS
Sbjct: 265 FREIRNVAKYAARLGQSFSSSKETLS 290
Score = 37.7 bits (86), Expect(5) = 1e-27
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
+SAWMFAS+ LTAA IRE +G+FR+
Sbjct: 242 SSAWMFASRYGLTAAEIREWMGNFRE 267
Score = 33.5 bits (75), Expect(5) = 1e-27
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = -3
Query: 1180 VASKGGLKSMPSAFFQNRYGGSSGF-----SES*KA*VNSRHR-----TPNLMF*NGASF 1031
VASK GLK P + FQ RYGG G + S K + R L + +
Sbjct: 328 VASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKY 387
Query: 1030 SHFFVIVK**SF--CLGISDYVFENEQKRSSL*T*FDITGPLRACEALGILSVAE 872
F+ + S LGI D +FE +Q+ + +T PL+A EAL ++S E
Sbjct: 388 QPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGE 442
Score = 25.0 bits (53), Expect(5) = 1e-27
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 521 HMVDCVLFPR*G 486
HMVDCV+FP+ G
Sbjct: 567 HMVDCVVFPQKG 578
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis] gi|743774329|ref|XP_010917516.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
isoform X1 [Elaeis guineensis]
Length = 1129
Score = 75.1 bits (183), Expect(3) = 1e-23
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
LLC K D E F+S++LQT A+LLEL+ K+ IF+ K R+M+ +DE TLEYG+VFV
Sbjct: 672 LLCGYKPDSEPFISMLLQTFRAARLLELKNKSRIFI-QKGRAMMGCLDETRTLEYGQVFV 730
Query: 690 QVSCLGREQ 664
QVSC GR Q
Sbjct: 731 QVSCTGRMQ 739
Score = 51.6 bits (122), Expect(3) = 1e-23
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ GKRPHPNECS SD D
Sbjct: 790 HMVDCVVFPQKGKRPHPNECSGSDLDGD 817
Score = 32.7 bits (73), Expect(3) = 1e-23
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3
Query: 607 VVLGKVSIAKNPLLHPGDM 551
V+ GKV IAKNP LHPGD+
Sbjct: 759 VLKGKVVIAKNPCLHPGDI 777
Score = 42.4 bits (98), Expect(2) = 7e-07
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SSTETL+
Sbjct: 490 FHEIRNVAKYAARLGQSFSSSTETLT 515
Score = 40.0 bits (92), Expect(2) = 7e-07
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
NS+WMFAS G LTAA+IR+ +GDF +
Sbjct: 467 NSSWMFASNGRLTAAAIRKWMGDFHE 492
>ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
[Elaeis guineensis] gi|743774333|ref|XP_010917518.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
isoform X2 [Elaeis guineensis]
Length = 1075
Score = 75.1 bits (183), Expect(3) = 1e-23
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -1
Query: 870 LLCDSKADQESFLSVMLQTVHVAKLLELRTKT*IFVVPKRRSMIRYIDEAATLEYGKVFV 691
LLC K D E F+S++LQT A+LLEL+ K+ IF+ K R+M+ +DE TLEYG+VFV
Sbjct: 618 LLCGYKPDSEPFISMLLQTFRAARLLELKNKSRIFI-QKGRAMMGCLDETRTLEYGQVFV 676
Query: 690 QVSCLGREQ 664
QVSC GR Q
Sbjct: 677 QVSCTGRMQ 685
Score = 51.6 bits (122), Expect(3) = 1e-23
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2
Query: 521 HMVDCVLFPR*GKRPHPNECSESDFKSD 438
HMVDCV+FP+ GKRPHPNECS SD D
Sbjct: 736 HMVDCVVFPQKGKRPHPNECSGSDLDGD 763
Score = 32.7 bits (73), Expect(3) = 1e-23
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -3
Query: 607 VVLGKVSIAKNPLLHPGDM 551
V+ GKV IAKNP LHPGD+
Sbjct: 705 VLKGKVVIAKNPCLHPGDI 723
Score = 42.4 bits (98), Expect(2) = 7e-07
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = -2
Query: 1256 FEIIRNLAKFAARLGQSFASSTETLS 1179
F IRN+AK+AARLGQSF+SSTETL+
Sbjct: 436 FHEIRNVAKYAARLGQSFSSSTETLT 461
Score = 40.0 bits (92), Expect(2) = 7e-07
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 1326 NSAWMFASKGPLTAASIRECIGDFRD 1249
NS+WMFAS G LTAA+IR+ +GDF +
Sbjct: 413 NSSWMFASNGRLTAAAIRKWMGDFHE 438