BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00045864
         (575 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su...   159   1e-36
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su...   159   1e-36
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   159   1e-36
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su...   158   2e-36
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su...   158   2e-36
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   152   1e-34
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   152   1e-34
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   152   1e-34
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   152   1e-34
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   151   2e-34
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   151   2e-34
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   151   2e-34
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   151   2e-34
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   151   2e-34
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   151   2e-34
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   149   1e-33
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   149   1e-33
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su...   148   2e-33
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su...   148   2e-33
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su...   148   2e-33

>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nicotiana tomentosiformis]
          Length = 1211

 Score =  159 bits (401), Expect = 1e-36
 Identities = 88/191 (46%), Positives = 109/191 (57%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  YVPQSIDSRVEL E      
Sbjct: 164 HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 223

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ +  V+L++ Q+QQL+M   H    PAIV+AP+  
Sbjct: 224 QLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRFQVQQLQMFCPHQVGMPAIVRAPSR- 282

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                               RS WTGKQL S+ +P D + DFP 
Sbjct: 283 -----------------------------------NRSYWTGKQLFSLFLPSDLDCDFPS 307

Query: 35  NGICISEGEIL 3
           NG+CIS+GEI+
Sbjct: 308 NGVCISDGEIV 318


>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana tomentosiformis]
          Length = 1447

 Score =  159 bits (401), Expect = 1e-36
 Identities = 88/191 (46%), Positives = 109/191 (57%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  YVPQSIDSRVEL E      
Sbjct: 400 HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ +  V+L++ Q+QQL+M   H    PAIV+AP+  
Sbjct: 460 QLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRFQVQQLQMFCPHQVGMPAIVRAPSR- 518

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                               RS WTGKQL S+ +P D + DFP 
Sbjct: 519 -----------------------------------NRSYWTGKQLFSLFLPSDLDCDFPS 543

Query: 35  NGICISEGEIL 3
           NG+CIS+GEI+
Sbjct: 544 NGVCISDGEIV 554


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  159 bits (401), Expect = 1e-36
 Identities = 90/191 (47%), Positives = 108/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPLIC P RGDFDGDCL  YVPQSI +RVEL E      
Sbjct: 432 HQHSLIALSVKVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSIKARVELIELVSLNR 491

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AAYL+++D V LN  Q+QQLEM   +  PFPAIVKAP   
Sbjct: 492 QLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPFPAIVKAPL-- 549

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                              + S+WTGKQLLSML P +F++DF  
Sbjct: 550 ----------------------------------LRSSVWTGKQLLSMLFPLEFDYDFTP 575

Query: 35  NGICISEGEIL 3
           N + I  GE++
Sbjct: 576 NDVVIRNGELI 586


>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nicotiana sylvestris]
          Length = 1254

 Score =  158 bits (399), Expect = 2e-36
 Identities = 87/191 (45%), Positives = 109/191 (57%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  YVPQSIDSRVEL E      
Sbjct: 207 HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 266

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ ++ V+L++ Q+QQL+M   H    PAIV+AP+  
Sbjct: 267 QLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMFCPHQVGMPAIVRAPSR- 325

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                               RS WTGKQL  + +P D + DFP 
Sbjct: 326 -----------------------------------NRSYWTGKQLFGLFLPSDLDCDFPS 350

Query: 35  NGICISEGEIL 3
           NG+CIS+GEI+
Sbjct: 351 NGVCISDGEIV 361


>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
           gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Nicotiana
           sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
           DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Nicotiana sylvestris]
          Length = 1447

 Score =  158 bits (399), Expect = 2e-36
 Identities = 87/191 (45%), Positives = 109/191 (57%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  YVPQSIDSRVEL E      
Sbjct: 400 HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ ++ V+L++ Q+QQL+M   H    PAIV+AP+  
Sbjct: 460 QLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMFCPHQVGMPAIVRAPSR- 518

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                               RS WTGKQL  + +P D + DFP 
Sbjct: 519 -----------------------------------NRSYWTGKQLFGLFLPSDLDCDFPS 543

Query: 35  NGICISEGEIL 3
           NG+CIS+GEI+
Sbjct: 544 NGVCISDGEIV 554


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Vitis vinifera]
          Length = 1354

 Score =  152 bits (384), Expect = 1e-34
 Identities = 85/191 (44%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E      
Sbjct: 312 HQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNR 371

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL+AA+L+ +D V LN  Q+QQLEM   +    PAI+KAP   
Sbjct: 372 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPL-- 429

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                                 +WTGKQL SML+P  FN+ FP+
Sbjct: 430 ----------------------------------LDTQVWTGKQLFSMLLPPGFNYVFPL 455

Query: 35  NGICISEGEIL 3
           NG+ IS+GE++
Sbjct: 456 NGVRISDGELI 466


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Vitis vinifera]
          Length = 1458

 Score =  152 bits (384), Expect = 1e-34
 Identities = 85/191 (44%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E      
Sbjct: 418 HQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNR 477

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL+AA+L+ +D V LN  Q+QQLEM   +    PAI+KAP   
Sbjct: 478 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPL-- 535

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                                 +WTGKQL SML+P  FN+ FP+
Sbjct: 536 ----------------------------------LDTQVWTGKQLFSMLLPPGFNYVFPL 561

Query: 35  NGICISEGEIL 3
           NG+ IS+GE++
Sbjct: 562 NGVRISDGELI 572


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1460

 Score =  152 bits (384), Expect = 1e-34
 Identities = 85/191 (44%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E      
Sbjct: 418 HQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNR 477

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL+AA+L+ +D V LN  Q+QQLEM   +    PAI+KAP   
Sbjct: 478 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPL-- 535

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                                 +WTGKQL SML+P  FN+ FP+
Sbjct: 536 ----------------------------------LDTQVWTGKQLFSMLLPPGFNYVFPL 561

Query: 35  NGICISEGEIL 3
           NG+ IS+GE++
Sbjct: 562 NGVRISDGELI 572


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  152 bits (384), Expect = 1e-34
 Identities = 85/191 (44%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E      
Sbjct: 421 HQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNR 480

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL+AA+L+ +D V LN  Q+QQLEM   +    PAI+KAP   
Sbjct: 481 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPL-- 538

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                                 +WTGKQL SML+P  FN+ FP+
Sbjct: 539 ----------------------------------LDTQVWTGKQLFSMLLPPGFNYVFPL 564

Query: 35  NGICISEGEIL 3
           NG+ IS+GE++
Sbjct: 565 NGVRISDGELI 575


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Gossypium raimondii]
          Length = 1300

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPLIC P RGDFDGDCL  YVPQSI++RVEL E      
Sbjct: 432 HQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDR 491

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AAYL+++D V LN  Q+QQLEM   +  P PAIVKAP   
Sbjct: 492 QLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAP--- 548

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                  L   P+                          WTGKQL SML P +F++ F  
Sbjct: 549 -------LLSNPV--------------------------WTGKQLFSMLFPPEFDYVFAP 575

Query: 35  NGICISEGEIL 3
           +G+ I  G+++
Sbjct: 576 SGVVIHNGDLI 586


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Gossypium raimondii]
          Length = 1340

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPLIC P RGDFDGDCL  YVPQSI++RVEL E      
Sbjct: 291 HQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDR 350

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AAYL+++D V LN  Q+QQLEM   +  P PAIVKAP   
Sbjct: 351 QLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAP--- 407

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                  L   P+                          WTGKQL SML P +F++ F  
Sbjct: 408 -------LLSNPV--------------------------WTGKQLFSMLFPPEFDYVFAP 434

Query: 35  NGICISEGEIL 3
           +G+ I  G+++
Sbjct: 435 SGVVIHNGDLI 445


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPLIC P RGDFDGDCL  YVPQSI++RVEL E      
Sbjct: 429 HQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDR 488

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AAYL+++D V LN  Q+QQLEM   +  P PAIVKAP   
Sbjct: 489 QLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAP--- 545

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                  L   P+                          WTGKQL SML P +F++ F  
Sbjct: 546 -------LLSNPV--------------------------WTGKQLFSMLFPPEFDYVFAP 572

Query: 35  NGICISEGEIL 3
           +G+ I  G+++
Sbjct: 573 SGVVIHNGDLI 583


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X1 [Gossypium raimondii]
           gi|763758424|gb|KJB25755.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
           gi|763758426|gb|KJB25757.1| hypothetical protein
           B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  SV S+NPLIC P RGDFDGDCL  YVPQSI++RVEL E      
Sbjct: 432 HQHSLIALSVKVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDR 491

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AAYL+++D V LN  Q+QQLEM   +  P PAIVKAP   
Sbjct: 492 QLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAP--- 548

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                  L   P+                          WTGKQL SML P +F++ F  
Sbjct: 549 -------LLSNPV--------------------------WTGKQLFSMLFPPEFDYVFAP 575

Query: 35  NGICISEGEIL 3
           +G+ I  G+++
Sbjct: 576 SGVVIHNGDLI 586


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Solanum tuberosum]
          Length = 1233

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  Y+PQSIDSR+EL E      
Sbjct: 191 HQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQ 250

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ +  V+L++ Q+QQL+M                  
Sbjct: 251 QLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC---------------- 294

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                         QL M A        IVKAP      WTGKQL S+L+P D  + FP 
Sbjct: 295 ------------PRQLGMTA--------IVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPS 334

Query: 35  NGICISEGEIL 3
           NG+CISEGEI+
Sbjct: 335 NGVCISEGEIV 345


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Solanum tuberosum]
          Length = 1446

 Score =  151 bits (382), Expect = 2e-34
 Identities = 87/191 (45%), Positives = 107/191 (56%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSV+ILP  SV S+NPL+C P RGDFDGDCL  Y+PQSIDSR+EL E      
Sbjct: 404 HQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQ 463

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+SHDSL AA+L+ +  V+L++ Q+QQL+M                  
Sbjct: 464 QLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC---------------- 507

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                         QL M A        IVKAP      WTGKQL S+L+P D  + FP 
Sbjct: 508 ------------PRQLGMTA--------IVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPS 547

Query: 35  NGICISEGEIL 3
           NG+CISEGEI+
Sbjct: 548 NGVCISEGEIV 558


>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
           subunit 1 [Prunus mume]
          Length = 1452

 Score =  149 bits (375), Expect = 1e-33
 Identities = 85/191 (44%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVKILP  SV S+NPL C P RGDFDGDCL  Y+PQS D+RVELRE      
Sbjct: 412 HQHSLIALSVKILPITSVVSINPLCCSPFRGDFDGDCLHGYIPQSNDARVELRELVALDK 471

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL AA+L+ +D   LN  ++QQLEM    + P PA++KAP+  
Sbjct: 472 QLINGQSGRNLLSLSQDSLTAAHLIMEDGTLLNLLEMQQLEMFCWDVLPSPAVIKAPS-- 529

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                             L SH                 WTGKQ+ SML+P DF++DF  
Sbjct: 530 ------------------LNSH----------------AWTGKQVFSMLLPSDFDYDFAS 555

Query: 35  NGICISEGEIL 3
           +G+ I  GE+L
Sbjct: 556 DGVYIKNGELL 566


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  149 bits (375), Expect = 1e-33
 Identities = 83/191 (43%), Positives = 106/191 (55%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVKILP  SV S+NPL C PLRGDFDGDCL  YVPQS+++RVEL+E      
Sbjct: 96  HQHSLIALSVKILPINSVVSINPLTCSPLRGDFDGDCLHGYVPQSVNTRVELKELVTLNK 155

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLHLPPFPAIVKAPTPE 216
                      LS+S DSL AA+L+ +D V+LNK ++QQL+M S  +P  PAI+++ + E
Sbjct: 156 QLVNGQSGQNLLSLSQDSLTAAHLISQDGVFLNKPEMQQLQMFSAWIPMLPAIIQSTSRE 215

Query: 215 MKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 36
                                                S WTGKQL S L+P DF F    
Sbjct: 216 ------------------------------------TSFWTGKQLFSQLLPLDFEFSNAS 239

Query: 35  NGICISEGEIL 3
           NG+ I  GE++
Sbjct: 240 NGVGIKHGELV 250


>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Cucumis sativus]
          Length = 1361

 Score =  148 bits (373), Expect = 2e-33
 Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  +V SLNPL C P RGDFDGDCL  YVPQS+++RVE+RE      
Sbjct: 322 HQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDK 381

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLH--LPPFPAIVKAPT 222
                      LS+SHDSL AA+L+ +D V LN  Q+QQL+ML+LH  LPP         
Sbjct: 382 QLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP--------- 432

Query: 221 PEMKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDF 42
                                        AIVK+P  +   WTGKQL S+L+P DF++  
Sbjct: 433 -----------------------------AIVKSPLLRNCAWTGKQLFSILLPPDFDYSS 463

Query: 41  PVNGICISEGEIL 3
           P + + I +GE++
Sbjct: 464 PSHNVFIEKGELI 476


>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Cucumis sativus]
          Length = 1362

 Score =  148 bits (373), Expect = 2e-33
 Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  +V SLNPL C P RGDFDGDCL  YVPQS+++RVE+RE      
Sbjct: 323 HQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDK 382

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLH--LPPFPAIVKAPT 222
                      LS+SHDSL AA+L+ +D V LN  Q+QQL+ML+LH  LPP         
Sbjct: 383 QLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP--------- 433

Query: 221 PEMKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDF 42
                                        AIVK+P  +   WTGKQL S+L+P DF++  
Sbjct: 434 -----------------------------AIVKSPLLRNCAWTGKQLFSILLPPDFDYSS 464

Query: 41  PVNGICISEGEIL 3
           P + + I +GE++
Sbjct: 465 PSHNVFIEKGELI 477


>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Cucumis sativus] gi|778675671|ref|XP_011650448.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           isoform X1 [Cucumis sativus]
           gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
           gi|700200830|gb|KGN55963.1| hypothetical protein
           Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  148 bits (373), Expect = 2e-33
 Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
 Frame = -1

Query: 575 HQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELREXXXXXX 396
           HQHS+IALSVK+LP  +V SLNPL C P RGDFDGDCL  YVPQS+++RVE+RE      
Sbjct: 444 HQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDK 503

Query: 395 XXXXXXXXXXXLSVSHDSLAAAYLLRKDDVYLNKAQIQQLEMLSLH--LPPFPAIVKAPT 222
                      LS+SHDSL AA+L+ +D V LN  Q+QQL+ML+LH  LPP         
Sbjct: 504 QLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP--------- 554

Query: 221 PEMKEDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDF 42
                                        AIVK+P  +   WTGKQL S+L+P DF++  
Sbjct: 555 -----------------------------AIVKSPLLRNCAWTGKQLFSILLPPDFDYSS 585

Query: 41  PVNGICISEGEIL 3
           P + + I +GE++
Sbjct: 586 PSHNVFIEKGELI 598